Genome2D webserver for Analysis and Visualization of Bacterial Genomes and Transcriptomes



Welcome to the Genome2D webserver (version 2.0, July 2018). For research at our Molecular Genetics department (MolGen) I developed loads of tools for genomics and transcriptomics analysis of prokaryotes. To make the most popular tools available for the biologists I developed the web interface Genome2D. Genome2D gives access to all publically available fully (no WGS) sequenced bacterial genomes of RefSeq, but also to the 'old' database which was deprecated in 2014. In addition, all genomes are re-annotated to build a database of functional classes (COG, GO, KEGG etc.) which are used in transcriptome data analysis (RNA-Seq and DNA microarray). Some data set transformations, such as reformatting DNA and Protein files, aligning tables, getting multiple DNA fragments, retrieving annotations of gene lists etc. are supported

Anne

anne.de.jong .. rug.nl
Molecular Genetics, Linnaeusborg 7, University of Groningen