    AM1_0004 NONE
    AM1_0005    4035 ..    4055 +  -5.5  -3.09015   AAAGACGTATCGCGA            TACACCT TGCTTTT AGGTGTA            TTAGCTGAATGTACG  53 51
    AM1_0006 NONE
    AM1_0007    7182 ..    7193 +  -5.8  -3.54638   TTTTAATCCACTTGG                CCTC TTTT GAGG                 TTTGGGAGCGATTGT  59 122
    AM1_0008    8152 ..    8185 +  -6.7  -2.83343   GTGATTCATAGGTTA     CGGCAGGCTTTAATG CGCG CACTAAATCATGCCG      TGTAATGATGCCTAT  54 126
    AM1_0012   10304 ..   10315 +  -5.8  -3.27475   ACTAAATTGTGAACA                CCGA AGCA TCGG                 TCTTATAATCGAAAC  57 179
    AM1_0013   11556 ..   11575 +    -5  -3.53811   CCTATTCCCCCGGAC            TAGGGTTC GGGA GAACGCTA             TTTAACAACACTCCC  55 46
    AM1_0019   20748 ..   20765 +  -2.7  -4.76041   ATTGTCATAGAGGGG             CTGCATCC AAG GGGTG-AG             TTTTTCGTCAATATC  68 457
    AM1_0025   29384 ..   29399 +    -9   -2.8552   ACAGTGTTCATGATC              CGCTGA AGAA TCAGCG               ATTTGATGAGTACAG  67 250
    AM1_0028 NONE
    AM1_0029 NONE
    AM1_0030   33660 ..   33678 +    -3  -3.53012   AGTAACTGCTCGCGA             GTCCGCTC TGG GGGTAGAC             TTTGCCCGGGGAACG  49 362
    AM1_0032   35556 ..   35583 +  -6.2  -3.55761   AGTCCATCGCTGTTA        CTG-CCTGACGCA GTT TGCGGCGGGACGG        TTTACCAGCTCCATA  59 229
    AM1_0042 NONE
        nblB NONE
    AM1_0044 NONE
    AM1_0045 NONE
    AM1_0046 NONE
    AM1_0047 NONE
    AM1_0048   49676 ..   49706 +  -5.5  -2.87344   TGGAAACAGCAGTAA      CTCCTGAA-CAATC TCCA GGTTGATTCAGGCG       TGTGTGCAAAGAATC  50 3
    AM1_0053   53493 ..   53521 +  -2.4  -3.89614   AACCAGATTAATCGA       GCGGGCGTATTAT TAAA ATTG-ACGCCTGC        TTTATCCAGATTGAG  52 102
    AM1_0057   56723 ..   56733 +  -5.4  -3.02233   AACAACACGATCTCT                 TGTG ACA CACA                 TCATATTTTTCAACT  52 86
    AM1_0058 NONE
    AM1_0059 NONE
    AM1_0060   58754 ..   58768 +  -7.8  -3.61178   AGAGTTCGCCCTGTC               CGGTCG CTA TGACCG               TTTAGACTGGCTAGA  70 108
    AM1_0061 NONE
    AM1_0062   60648 ..   60665 +  -3.4  -4.43859   AGGAATGTTAAAAGC             TTGGGA TAGCGT TCCCAG              TTTTGTGAGATTGTC  63 414
    AM1_0068   70034 ..   70048 +  -4.3  -3.18796   ATCACAAACTGAATA               GAATC TAGTC GATTC               TTGCCTATAATTTTC  49 18
    AM1_0069   71531 ..   71553 +  -2.1  -3.82084   ATCTTTCTTTTTGCG           TTTCATG GTGATTGTG CATGAAA           TTCTTGATCTTGAAA  51 135
    AM1_0070   72384 ..   72394 +  -2.4  -4.10552   ACATCACATTGACCA                 GCTG CCA CCGC                 TTTAATTTGGTCAAC  55 437
    AM1_0072   73915 ..   73928 +  -2.4  -3.19232   TAAATCTTTTTATCA               TCTG GGTGAG CAGA                CTTTGTATTTGCAGC  43 129
    AM1_0075 NONE
    AM1_0076 NONE
    AM1_0077 NONE
    AM1_0078   84427 ..   84439 +  -6.3  -2.73124   TGCAAACTATAGATG                CAGAA GCA TTCTG                GTTTCAGACATGACC  54 114
        corA NONE
    AM1_0080   86493 ..   86506 +  -4.5  -3.71848   CGCTTTCGCATGGTG               GAGGC AGGT GCTTC                TTCTTAGTCGACAGC  57 5
    AM1_0081   87696 ..   87722 +  -3.6  -2.74322   CACCTGTTGCTCACA         GTCAGGGGCAGA TTT TCTGCACCTAAG         ATTTAAGAAATTAGG  45 267
    AM1_0082   88289 ..   88313 +  -2.8  -2.83403   GGGGCAGTATTTGCA          CCAGGTTACA GTAGA TCTATCCTGG          ATTTACTCAACAGCC  42 54
    AM1_0083   89484 ..   89497 +  -3.1  -2.75069   TAGGGGTTCAAAACC               TCTCA AATC TGGGA                ATCTTGTTTCATGCA  43 296
    AM1_0084   91431 ..   91447 +  -6.5  -4.45517   AAAAAAGCCGATGGG              TCGCTGG GTA CCAGCCA              TTTTCTGAGTGATTT  74 271
    AM1_0086   93437 ..   93464 +   -10  -3.05384   GCCAAGAACAAAGTT        TGGATTGGATTG TAAT CAGTTCAATCCA         TTAAATGGCAGCGAA  73 83
    AM1_0088 NONE
    AM1_0089   95820 ..   95844 +  -2.9  -2.70044   TGATTGGCAATGGGG          TTCAGCAAG GATAGGG CTTGTTGAG          GGTTTTTATAGACTC  41 185
    AM1_0093 NONE
    AM1_0094   99108 ..   99120 +  -6.3  -3.69734   AAATACCGTAGCATC                GTCTT TTT AAGAC                TTTGACTCGGTTATT  63 136
    AM1_0096 NONE
    AM1_0097 NONE
    AM1_0098  101367 ..  101377 +  -5.4  -4.17448   AAACCAACAAAAAAT                 CGTT GCA AACG                 TTTGTAATTTGATTC  65 96
    AM1_0100  103051 ..  103105 + -15.6  -3.40907   ATACGACTACAACAA GAATAAGTAAATTAATAATTGTATTT GAG ACAAGCAATTATTAATTTACTTATTC TTAATATTAATATAC 100 332
    AM1_0102  106068 ..  106084 +  -2.1  -4.42653   CTGACTATGGGGGAT              CCGAATC TAT GCATCGG              TTTTATCGCTGGGCT  60 477
    AM1_0104  109007 ..  109023 +  -5.1  -5.28826   TTACTTCCTGAATTA              ACCTGAA GTT TTCAGGA              TTTTTTCTGCCATTT  84 164
    AM1_0105  109781 ..  109815 +  -6.4  -2.87146   AACCCCCCAGAGCAA     CCCTCAGTTTTGCC GTAAATA GGTAAGTCTGGGGG     CTTATTGTCAAGAAA  55 53
    AM1_0106 NONE
    AM1_0107  116597 ..  116607 +  -5.4  -3.61715   ACAATCATATTGACT                 GAGA ATT TCTC                 TTCTTCCCGAGGATC  59 227
    AM1_0109  117542 ..  117556 +  -2.8  -2.65264   CTATTAGATCTAGAA               GCATTC GAC GAATCC               TAATCTCCATCGTAC  41 8
       coaBC  119013 ..  119029 +  -5.8  -2.66634   TCGAACCCCCGACAC              CGTGGT CCGTA GCCACG              TGCTCTAGTCCACTG  52 240
        moaC NONE
    AM1_0113  120056 ..  120070 +  -2.1  -3.76281   CTCATCAAACATTAA              GC-CTG GCTT CAGTGC               ATTTTTCTTTGGAGT  51 109
    AM1_0114  120851 ..  120869 +  -2.5  -3.08312   ATACACGAACAACGA            GAATAGGA TTGA TCC-ATTC             TTGAGTAGATGAATT  44 133
    AM1_0115  122051 ..  122070 +    -5  -3.01712   GGCACAAATCTCCTC            GCCGTGTT GGAA AATATGGC             TCTTCAAAGAGAGGG  49 413
    AM1_0117 NONE
    AM1_0118 NONE
        rpoE  124228 ..  124249 +  -3.8  -3.36671   TCATCCTTCCAGCAT           CTTGGATT GAGAAA AATCTAAG            TTCTCCCATTCAAAT  49 16
    AM1_0120  124812 ..  124829 +  -2.1  -2.53382   AAATAACTGTGTGCA             TCAAACAT CAG ATGTT-GA             TAAATTGCCAGTAAT  39 156
    AM1_0122  125518 ..  125532 +  -6.4  -4.02315   AAAGCCTCCACAACT               CGTCTG TTG CAGATG               TTTCCCTTTTTCCTT  67 78
    AM1_0123 NONE
    AM1_0125  126550 ..  126560 +  -3.2  -4.27316   CAATTGTAGATACCA                 TAGC AGG GCTG                 TTTTAAGTTAGCAGC  61 9
    AM1_0130 NONE
    AM1_0131 NONE
        ndhC  132341 ..  132356 +  -3.2  -3.20164   CTGGCGAAAAGGAGC              CTTGGA GTGG TCCTAG               TTAGGTTGGATATCC  46 10
        ndhJ  133004 ..  133039 +   -12  -3.87373   AATTTTCGTTCAAAA    TGAAAGCCTCGC-TGAT ATA ACCAAGCGGGGCTTTCA    TTTCTCAAAAATGTA 100 49
    AM1_0138  136857 ..  136886 +  -7.2  -4.60797   TTTGGCTGAACTTGA       GTATCCAAGGGT GATGTA GCCTTTGGATGC        TTTTGTGTATGCGGG  81 91
    AM1_0139 NONE
         glk  138356 ..  138366 +  -5.4   -3.6258   GTTGATTTCGACTGA                 TCTG GGA CAGA                 GTTTTTCGTTTCTAT  59 63
    AM1_0141  140002 ..  140023 + -10.9  -3.29937   ATTTGGCGCGTTCTT           CTGTCCAGT TACA ACTGGGCAG            TATGTTTGGATGTTG  81 66
    AM1_0142  142172 ..  142194 +  -4.2  -3.59023   TTAATCTATTTCATG           TTAAGAGGAA ATT TGCCTTTTAA           TTATAGTTATGTCGA  54 455
    AM1_0143  143717 ..  143729 +  -4.1  -2.55074   CTCGATCCGCCCACT                GGAGT ACC ACTTC                TGGATTACGATTAAA  44 483
    AM1_0147  145879 ..  145896 +  -7.7  -3.41527   CGATGGCTGAAATAG             CTGTCGT CTAA GCGACAG              TTATCGTGAACCTTG  64 86
    AM1_0148  147977 ..  147994 +  -3.3  -2.72436   TGGCAAGCTAAGGGG             TGGAGCG TTTT TGCTCCC              TGAGTTTCCTTATCG  42 150
        ispG  149480 ..  149497 +  -8.5   -3.4178   GGATTCCACCTTGCC             CGTCTTA CGGT TAAGACG              TTGTAATCCCGTGAT  66 250
    AM1_0151 NONE
    AM1_0152  152652 ..  152665 +  -2.3  -2.80816   GATTCTGGGGCAACA               CTGCA CGGT TGCCG                TCTAATGCCTAAGCC  41 7
    AM1_0153  154085 ..  154098 +  -3.1  -3.51234   AACATGTCTCTTTAT               GGC-CT GAG AGTGCC               TCTTTGAATTTGAGT  49 268
    AM1_0154  154356 ..  154370 +  -4.2  -3.96148   GGATTTGGTCTGGTC               CATCGC TTT GAGATG               TTTCTCATCACCAAA  59 107
    AM1_0160  160218 ..  160230 +  -6.3  -3.04144   TTATGGTCTGGAAGT                TCTTC CTT GAAGA                TATTGAACATCAAGA  55 159
    AM1_0165  167913 ..  167924 +  -2.2  -3.64283   AAAATAACAAAGGTG                GCTT TACT GAGC                 TTCTTAACAGATTTC  50 160
    AM1_0167  169164 ..  169178 +    -7  -3.96068   AACTGGCGAACTTCA               GGACGC TTG GCGGCC               TTCTTATTGACATAA  69 515
    AM1_0173  178276 ..  178306 + -14.2   -4.1711   TAAGTTGAAGCCATA       CAGAGGAAGCTA AATCCCC TAGCTTCCTCTG       TTTCTTGCGAATGCT 100 57
    AM1_0178  183108 ..  183120 +  -4.8  -3.64685   ATATAAGTCTGGCTG                CCCA TCAGC TGGG                TTCTTCAGGGCTTTT  57 333
    AM1_0179  184376 ..  184389 +  -4.5  -2.54192   TGTAATTTATCCCAA               TCCCA GGCA TGGGG                GTTGGTAGTGATGTA  46 116
    AM1_0182  186398 ..  186412 +  -4.2  -3.21276   GCAGCTTGAGGTCGA               GCCTGA CGT TGAGGC               TGTTGTGGAGGCGGG  48 400
    AM1_0183  187902 ..  187917 +  -2.6  -3.65046   AGGCAGTGGGTAAGC              GATAGGA CTG TCC-ATC              TTGTTGGCCTCGCCA  51 429
    AM1_0193  194143 ..  194153 +    -4  -4.13767   TAGCCTTTCCTCCTC                 TTCT GCT AGAA                 TTTTGCCATCAACCA  60 513
    AM1_0195 NONE
    AM1_0196  196350 ..  196367 +  -4.9  -2.68223   ATAAAAAAACTGGGG             CTTCTAT TTCA ATAGAGG              GTTGTCCTATCACTA  48 219
    AM1_0197  199363 ..  199396 +    -4  -2.62263   TCTGAAATCGCCAGC    TACAGCCT-GCTATCC ATGA GGATAGCCAGG-TGGA     TGATATCAGCAAGCT  45 259
    AM1_0198  200173 ..  200192 +  -3.6  -3.40163   TTATAGTCATCGAGC            CGGAAA CCATAGAT TTTCCG             TTGCTGTTGGTCATA  48 275
    AM1_0200 NONE
    AM1_0207  206297 ..  206311 +  -2.8  -4.19258   CACCTGGATATCCAC               CAGC ATCATTG GCTG               TTTTAGCTAGACTAT  57 172
    AM1_0209  206930 ..  206942 +  -2.7  -4.74801   CGAGAAATCAACTAT                TTCAA GGC TTGAG                TTTTTACTAGAATTC  68 60
    AM1_0211  209445 ..  209460 +  -6.2  -2.82895   AAGAAATTTAGCTTG              TATGAG GTAG CTCATA               GTTGTTCGTAGGCAA  55 30
    AM1_0212 NONE
        narK  210291 ..  210321 +  -3.3  -3.66921   CAGCCTCCTATTCTA      GGGACT-CTGGCTA GGTT TAGCAGGGAGTTCC       TTTACCGTTGGCATT  51 25
    AM1_0214  211251 ..  211264 +  -5.3  -3.63266   TTACTTCAGACTTAT               GATTG TTTC CAATC                TTTGAGCTGGGTTTT  59 112
    AM1_0216  212141 ..  212152 +    -3  -2.82193   TCATCTGGGTACTCC                TTTC AGGA GAAA                 TATGGTGGATCTCGT  43 117
    AM1_0217  212875 ..  212891 +  -2.3  -5.00616   CATTAAATAAATTCT              TTTATTC CTA GAAGAAA              TTTTTTAAAAAAAAA  68 369
    AM1_0219  215078 ..  215092 +  -7.8  -3.35996   TTAATGGGTGAGGTG               GGGGAG TAT CTCTCC               TTATCACTAGCGGTC  66 165
    AM1_0220  217847 ..  217863 +  -5.1  -4.30635   ACTCTCCGCTTGCAT              TGCTGCT TTA AGTAGCG              TTTCTGCTTTTTGTT  66 473
    AM1_0227  226693 ..  226703 +  -3.2  -4.33274   AAAGAAATTCAGCGA                 TCTG ACT CGGA                 TTTTAGTCCTCTAGC  61 136
    AM1_0228  227396 ..  227412 +  -4.5  -4.07568   CAAAATGATCGTCTG              GAATATT AGA AGTATTC              TTTTGGAAAAAAACG  62 338
    AM1_0230  228189 ..  228202 +  -4.5  -3.58343   CAACCTGGATGTTGG               GCACT CAGA GGTGC                TTTAAAAGTGGTCCA  55 251
    AM1_0232  230064 ..  230074 +  -3.2   -4.3295   CTTCAAATAGCTTAA                 CGTG CCT TACG                 TTTACTTTTGTTAAC  61 61
    AM1_0234  231431 ..  231441 +    -4  -4.57353   GGGGTTTGACATGGC                 TAAC TGA GTTA                 TTTTCTCTGGTCAGA  66 193
    AM1_0240  239838 ..  239859 +  -6.5  -4.84527   TAGTGATTTAAGGAA           TCCTCGCTT TTTT GAGCGGGGG            TTTTTGCTATCTGGG  80 205
    AM1_0241  240517 ..  240531 +  -7.1  -3.44186   GCATAAGGAATCAGG               CCCGA TAGGT TCGGG               TTAGTTCGTCTCGTT  66 482
    AM1_0243  240854 ..  240866 +  -3.3  -5.52986   GGTCTATACGCAGCA                AGGCT TTC AGCCG                TTTTTTTCGTAAACT  82 110
    AM1_0247  244012 ..  244032 +  -6.1  -3.43853   ATCGAGACCAAATAG            CTTGCTTTC CCA GGACGCAAG            TCTTTCCCTCATTAA  61 26
    AM1_0248 NONE
    AM1_0250  247894 ..  247911 +  -3.4  -4.72631   GAAAGGCTTCATCTT             GGCTAT ATGGAA GTAGCC              TTTTATTAGCTTGAT  69 375
    AM1_0253  250184 ..  250212 +  -2.4  -2.89881   ATTAAGACATTGGAT       GGAGAGCTGTTGT GGAA ACTAC-GCTCTAC        TGTCTGCAGTAAATA  41 245
    AM1_0254 NONE
    AM1_0255 NONE
    AM1_0256  253076 ..  253089 +  -3.1  -2.70532   TGTGGCAGGGTCAGT               TCCAG TTAA TTGGA                TAGATTTCTCAAAAT  41 352
    AM1_0270 NONE
    AM1_0271  271343 ..  271391 + -18.4  -2.55253   GGCTCCGAATCAATA AATACTTTAGGGCAGAAAGCGG TGCTC CTGCTTTCTGCCCTAAAGCATA TCCATTGGGATTGAT 100 25
    AM1_0272 NONE
    AM1_0273 NONE
    AM1_0274 NONE
    AM1_0275 NONE
    AM1_0276  273805 ..  273840 +  -5.5  -2.96711   ACTGGGGGAGCACTG    GGCTACCCCCTAGATA AACTC TAT-GAGGAGGTAGCC    TATATCGCTTATCAC  52 13
    AM1_0277  276162 ..  276198 + -12.4  -3.53091   AAACCCAAGACAAAA    CCCTAGCGTTTTGC GGTGACAAA GCAAATCGCTAGGG    TTTAAGAGAGAGGAT 100 20
    AM1_0279  279616 ..  279644 + -11.1  -3.00704   TTCAATAGCCTCTAC        GACCTCTAGGG AGTCCAA CTCTAGAGGTC        TCTCGTTTGGGGAAT  79 64
    AM1_0280  280487 ..  280503 +  -2.3  -4.96773   CATCAGAGGCTAGGA              TATATAG CAG CCATATA              TTTATTTTTAATTCG  68 318
    AM1_0282  280832 ..  280849 +  -3.5  -3.91676   TATTGGTTTTTATCT             TGAAGAT TACT ATTTTCA              TCTTTTCGTTTATAA  58 125
    AM1_0283  282127 ..  282181 + -15.9   -2.8789   ACATCAGTATTAGAG GCTTATCTCAACCGAAAAGCGCATCT TCAA GGGTGCGCTTTTCGGTTGAGGCT-GC ATTCTTATAGGAGTT 100 51
    AM1_0288  289258 ..  289271 +  -8.1   -3.3506   CTAACCCATTAAGGG               CTGGG CCGT CCCAG                TTCTCCGACTTTAAC  66 29
    AM1_0289  289704 ..  289729 + -10.6   -3.3344   TTGTTTAGTAAGCAA         GTGCAAAACT CATAAC AGTTTTGCAC          TTGTCCCCATTCCCT  78 33
    AM1_0290 NONE
    AM1_0291  290749 ..  290768 +  -3.6  -4.21438   TTACCTTGATATTTG            TGATTTAG ATAT CCAAATCA             TTCTTTGTTGAAGTG  60 18
    AM1_0313  294243 ..  294270 +    -5   -3.9638   GTTTTTTTATCAAAT        CGTGGATTTAGGA TAG TTC-AAATCTACG        TATTTTATATTCCTC  61 162
        pheT  295670 ..  295681 +  -2.2  -3.57144   GGTGGTCACTGTTCG                CTTC TGTG GGAG                 TTTAACAGTGGCCAC  47 44
    AM1_0315  295883 ..  295893 +  -2.4  -3.14468   TGATGAGCTACTCTC                 CACC AAC GGCG                 TTGAATCTAATGCGG  43 103
    AM1_0316  296383 ..  296400 +  -4.1  -2.62616   TGAGCTGGTGTAGCT             CAATGGC CAGA GCAATTG              TCCTGTAAACAATAG  45 224
    AM1_0319  297216 ..  297243 +  -6.2  -4.00782   GCGGTGCCAACGCCA        GCGCGTGAGTGCG AAT CTCAC-CACTCGC        TTTGTGGTCCTGTAA  67 217
    AM1_0325 NONE
    AM1_0326  299830 ..  299840 +  -4.6  -3.90316   CCGCTTTCTTGACTT                 GTGC GAA GCGC                 TATTTTTAACGCAAT  59 351
    AM1_0328  300718 ..  300730 +  -4.1  -3.78934   GTTGAAAGTCCTAGC                TCTCT GTA GGAGA                TTGTTATGCCCCACA  57 46
    AM1_0329  301482 ..  301498 +  -6.5  -3.90112   TTTATAGGGAGGGCT              GCAGGTT CAA ATCCTGC              TTTGCTTCGCGCAAA  65 91
    AM1_0330  303208 ..  303253 +  -9.1  -3.65314   CGGTACTAATTGATA GCTAGTTCAGAGAGCGATTGT TGAT GTGATCGCTCTCTGAATAACC TTATTAAGGGTTCGA  75 32
    AM1_0332 NONE
        thiF  305455 ..  305467 +  -4.1  -3.40522   TTGATAGTTGCAAAA                TCTCT GTC AGGGA                TTGTCATGACACAAT  51 37
    AM1_0334  307174 ..  307195 +  -5.8  -3.09492   ATACTTCAGCAGAAT           GATGCCGG AGCGAA CCAGCATC            TGTTCAAATTCAGGG  53 524
    AM1_0339  311649 ..  311673 +  -4.3  -5.27023   AGGTCCCCCGTTCTC          ACCCAATCA TTCAACT TGATTGGGA          TTTTCTTTTTAAAGT  80 192
    AM1_0341  315314 ..  315327 +  -5.2    -3.695   TGTGTGTTTCGGCGA               GGGC CTTCTA GCCC                TTTACCCTCTTTCCC  59 15
    AM1_0342 NONE
    AM1_0343 NONE
    AM1_0344  316984 ..  317024 +  -2.6  -2.55351   TTCATCTAGCCTTTA CGCGATTCATGCAACAAAG CCAT CTTTGA-GCCTAAATTGCG  GTTGATATCGGCGGC  41 60
    AM1_0345  317888 ..  317898 +  -4.6  -3.14132   CTAGACACAACCGTG                 CTGC GGG GCGG                 TTCCTGGAACAACAA  51 48
    AM1_0346  319035 ..  319054 +  -4.2  -3.12351   AAACCAAGTTGTGAA            GTAACGCT TGGG GGCGTAAC             TTCCCTGTGGACCAA  48 487
    AM1_0351  321998 ..  322017 +    -2   -3.7941   CGAGTTGGGAGCGCA            TCTTGCCC TTAT GGGTCGGA             TTGTTATCGAGAATA  51 300
    AM1_0354  323490 ..  323504 +  -4.2   -4.0156   ACGTTGCGTCAGAAC               CATCTC TTT GAGTTG               TTGTTGTTCCTCTGG  60 481
    AM1_0358 NONE
    AM1_0359  328024 ..  328034 +  -2.6  -3.15544   CTAAGGCCGTTAAAA                 TATT GAA AATA                 TTACTGCCAATCACA  45 370
    AM1_0364  334772 ..  334783 +  -5.8  -3.89524   CCGTTCTTGGGTGAT                GGGA TTAA TCCC                 TTTATGGGCTAGAGT  64 414
    AM1_0374  343350 ..  343360 +    -4    -4.614   AGGATTTATAAGTCT                 TTCA AAG TGAA                 TTTTATCTGGTTGAA  68 419
    AM1_0392  365945 ..  365957 +  -6.3  -3.64755   TTCTTGCAGAGCCCC                TGAGT TAT ACTCA                TTGTTCGAGGTATAT  63 317
    AM1_0393  367145 ..  367158 +  -2.3  -4.91109   AATCAAGGTGGAATC               CGATG TTAG CAACG                TTTTTGTCCTAAAAA  66 113
    AM1_0394  368248 ..  368261 +  -4.5  -3.63656   GGCAAACAACTGATT               CAGCT CAAC GGCTG                TTGTGTCTAACTTTT  57 468
    AM1_0398  371801 ..  371832 + -13.3  -5.07567   AAACCGTACCCTAAA      TGAACTGTTTCTA TTACCT TAGAAACAGTTCA       TTTTTTCGGCTATGG 100 52
    AM1_0399 NONE
    AM1_0400  373687 ..  373707 +  -3.2  -2.53263   TTGGGCACCGTTAAC            TCAGGGGT TTGCT GCTCCTGG            TAAATTGCCAATCGG  42 268
        pyrE NONE
    AM1_0410 NONE
    AM1_0411  385850 ..  385869 +  -2.8   -3.1211   GAATATGATAAGATC            CTCGG-ATG GCT CTTACCGAG            TTCAATCCTATCCTG  44 132
        lysA NONE
    AM1_0413 NONE
        uppS  389089 ..  389101 +  -3.4  -2.57795   CATTTAGTAAGATGC                TGCA TATTT TGCA                TAAATTACTGATAAG  42 42
        grpE NONE
        dnaK NONE
        dnaJ NONE
    AM1_0424 NONE
        rsgA  401381 ..  401395 +  -4.2  -3.05522   CGAATGCTTTCCGGA               TGAGGG ATA CGCTCA               CTTTTAGCCAGATTA  47 358
    AM1_0427  402556 ..  402578 +  -3.5  -2.64735   GCTTCATTACAATTG           TTGATCC CAGGGCAAC GGATCAA           TAGTATGAATAGAGT  44 118
    AM1_0428  403430 ..  403451 + -10.1   -5.0538   ATTCAGCTTAAAAAA           GCAGCCCCA GATT TGGAGCTGC            TTTTTTAAGCTGAAA 100 74
        purM  406601 ..  406623 +  -8.4  -3.73402   AACATACTCCTCCAC           CCCTTGCTCA ATC TGGGAAAGGG           TTTGATCCAGCATGT  71 353
    AM1_0435 NONE
    AM1_0436  410115 ..  410153 +  -3.3     -3.94   CTATTTGGACTGCCA  TTGCC-CTAATGCTTC TGATAGGT GAAGCGTTAGAGGGAA   TTGTTTAGCAATTCA  56 135
    AM1_0438  413172 ..  413183 +  -5.8  -3.66999   TCAACAAAAATACAA                TCGC CCCT GCGA                 TTTCAATGAATAAGT  61 1
        pflB  415939 ..  415964 +   -12  -3.70076   TTCTAGCTACCCCTG         CTTCCCCTTA CCTGAC TAAGGGGAAG          TTTCCCTCCCTTTCG  93 35
        ppsA NONE
        pflA  419395 ..  419405 +  -2.4  -3.41341   ATGGGGTATCGGTCC                 GCTG ACC CCGC                 TATTTGAATAGGATT  47 21
    AM1_0442 NONE
         xfp NONE
    AM1_0444 NONE
        ackA  428240 ..  428254 +  -6.4  -3.01712   GCCCCTGCAAAATCT               CGCTTT CCT GAAGCG               TATTGGGCAACAAAA  55 525
         sqr NONE
    AM1_0453  433552 ..  433565 +  -3.1  -4.18018   TGGAGGGTATGGAGT               CATTG TGAT CGATG                TTTTGACTCAAAGAA  58 18
    AM1_0454  435179 ..  435199 +    -7  -3.29739   CCAAAGGAGGTTATT            CAAATGAA GTGGA TTCATTTG            TTCATATCGATTGCC  61 302
    AM1_0455 NONE
    AM1_0456 NONE
        nrdG NONE
    AM1_0458 NONE
    AM1_0459 NONE
    AM1_0460 NONE
    AM1_0461 NONE
    AM1_0462  441261 ..  441276 +  -3.4  -3.44229   TTCATCTATGAAAGG              TTATAT AGTT ATATAA               TTGTACTGATAGCCT  49 237
    AM1_0463  441708 ..  441731 + -13.2  -3.19835   ATTAACTGCGTCCAA          CCCTCACGGT TTAA ACTGTGAGGG           CTTTCTCTTGTTGAC  95 58
    AM1_0464  442739 ..  442749 +  -4.6  -4.10085   GTACACCGGGAAGGC                 TCGC GCG GCGG                 TTTCATTGGTTTTTC  62 270
    AM1_0466  444685 ..  444703 +  -3.1   -3.1552   CCATTGTTGGGAGAG             GTGGG CTACCATCC CCCAC             TATTACTGAATAAGG  46 79
        hemN  446186 ..  446196 +  -6.8  -2.73441   ATGGCGCTAATATGA                 GCTG ATC CAGC                 GTTTGGACCCTCATA  56 88
    AM1_0468  447025 ..  447036 +    -3  -3.61178   TGTGCTTGCAGCTTA                TTGA GATA TCAA                 TTTCAGCTGCCTCAA  51 295
    AM1_0469  449843 ..  449857 +  -2.1  -4.14859   CAGAAAACGGCTTTT               TTCGG TTTAT TCGAA               TTTATCGTTATTGAT  55 423
    AM1_0471 NONE
    AM1_0478  458926 ..  458936 +  -2.6  -3.14647   TCAAAATTAGATTAT                 TTAA ATA TTAA                 TTAGCTCTCATAACT  44 49
    AM1_0479  460420 ..  460432 +  -3.4  -3.51708   GCTGTGAGGCGATCG                CGAT CCAGT ATCG                TTACTTTGGGACCTG  50 137
    AM1_0481 NONE
    AM1_0482 NONE
    AM1_0483  464892 ..  464903 +  -4.4  -3.76885   TCTTGCTGAAAATCT                TGAG TTCC CTCA                 TCTCTTTTTTTGAGC  57 47
    AM1_0484  465563 ..  465577 +  -8.6   -2.7094   ATGTCTTATACCAAT               TCACCT ATT AGGTGA               CTTGTATAGGTAAAG  63 149
    AM1_0487  467436 ..  467446 +  -5.4  -3.53012   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 39
    AM1_0489 NONE
    AM1_0490  469901 ..  469922 +  -3.7  -3.41602   TAACATATATCCGTA           GTGCTATAT AAGC ATGTAGCCC            TTGTCGTCGACTCAA  51 25
    AM1_0492  471042 ..  471053 +  -2.2  -3.12351   TTGAGCGTCGGCGAT                TGCT GGAT AGCG                 TTGAGTCTCGCCAAA  43 37
    AM1_0494  471900 ..  471911 +    -3  -3.79874   TCCTCCTTATTCATA                CAAT AGTG ATTG                 TTCTGTTGTCTCCAC  53 443
    AM1_0496  474432 ..  474457 +  -4.7  -4.30576   TCTCTGAGTCGCTGA         TTTGCGCCGAT AACT ATCGGCTTGAA          TTTTGATAATCAAGC  66 525
    AM1_0505  480799 ..  480811 +  -3.3  -3.65902   TGTCTTGTCTGGGGA                CGTTC AAT GGGCG                TTTCAGTCACATCCA  51 451
    AM1_0508  482283 ..  482293 +  -2.4  -2.53263   GCAATCGCACTGGCA                 GCCG TAT CCGC                 TAACTTCGCCATCAC  39 237
    AM1_0509  485110 ..  485127 +  -7.1  -2.64747   TTCAGGCGCATTATC             TCCTATT AGAA AATAGGA              ATTGTCGTCCACTGA  56 305
    AM1_0513 NONE
        moeB  488796 ..  488809 +  -8.1   -2.7806   AGGATCGCAGCTTGA               GTGCG ATCA CGCAC                ATTTAACCGTTTCAA  59 128
    AM1_0518 NONE
        phyH NONE
    AM1_0520 NONE
    AM1_0521  495222 ..  495233 +  -2.2  -3.86346   AGGTTGGGAGAAATA                GTTC CCTT GAGC                 TTTCTGACACAATAG  52 139
    AM1_0523  499561 ..  499580 +  -2.8  -3.02511   TGGATATTCGTCGGC            GTGGTACT TTGC AGTCCTAC             TGTTAGGCCCATGCA  43 0
    AM1_0524 NONE
    AM1_0527  504186 ..  504241 + -12.7  -3.49777   TAGTCCCTACAAAAA TCACCAGCACCTCTATCGATTGGAG CTAAAA CGCTAAACAATAGAAGTGCTGGTGA TTCTGATATGTCAAA 100 95
    AM1_0531  511827 ..  511837 +  -3.2  -3.66017   CGGTCTGCAAGGGTT                 TCCA TGC TGGG                 TTACTTTCTAGTTGT  51 48
    AM1_0532  513473 ..  513485 +  -3.3  -3.89614   AAATTCAAGGCTCGA                ATGCG ACC CGCAA                TTTCTAACAGTTCAG  55 208
    AM1_0535  517515 ..  517530 +  -4.6  -2.78371   TCTTCAGATGAATGC              CAGGTG GCAC CACCCG               ATTCTTACAGGTATG  49 290
    AM1_0546  529306 ..  529348 + -15.7  -3.57144   CCTGAAGTCTTAGCA CCATAGAGCGCCTGATCGG CTTGT TTGATCAGGTGCTCTTTGG TTTGGGCATCACCAG 100 99
    AM1_0552  540543 ..  540554 +  -2.2  -5.46657   TTGATTTCTGCAATG                CAGT CAGG GCTG                 TTTTTTGTTCCGCTA  79 313
    AM1_0554  541438 ..  541448 +  -5.4  -3.30159   ATCAATGTGTTTTGA                 GCAT CTA ATGC                 TTCTCGCAAACTTCG  54 274
        rbcR NONE
         ppx  546415 ..  546433 +  -4.6  -3.48593   TGGAAAGAGAATCAT             TTAAGGAG ATC TTCCTTGA             TTCTCTAAAGCCATC  55 118
    AM1_0560  548677 ..  548698 +  -8.8   -3.1505   TGCTTAAATGCCGCT           TCTAAGGG CTCACA CCCTTAGA            TTAATGGGGCCTGAT  69 58
    AM1_0561  549429 ..  549445 +  -3.7  -2.54193   ATGCGTTGGTGATTG              CCTCT CTCCCCT AGAGG              TCCATTGACCTAGTA  44 44
         dxr  551106 ..  551116 +  -2.4  -2.66912   TCCATCCGACCATTG                 TGGG TGA CCCC                 TCGTATCCCTTGACT  39 433
    AM1_0566  556539 ..  556557 + -11.8  -3.40597   AAGGGTTCATCCTTG             CCTCCATT GAA AATGGAGG             TGTTTGACTGACCAG  82 385
    AM1_0568  557122 ..  557152 +   -12   -5.4756   TTTGAGAAGATTTGA       TCTCATAGCTCTAA TAT TTTGGGCTATGAGA       TTTTTTCTTGCAATT 100 52
    AM1_0570  558533 ..  558562 +  -7.9  -3.07443   GCCTTTCATCAAAAA       CCGGTTCTCTC TTGGAACT GAGAAAACCGG        TTGAATGGGATGTAA  63 398
    AM1_0573  560595 ..  560610 +  -3.2  -3.55444   AACCCAGGTATTGGA              GCCGAT GGTG ATAGGC               TTTGCAAACTCGAAC  50 298
    AM1_0578  564062 ..  564073 +  -2.2  -4.05788   AGGTTTAATCTAGAC                TGGT TTTA ACCG                 TTTGATTTAGCCAGC  53 121
    AM1_0579  565069 ..  565080 +  -2.2  -3.90291   TCAAACATAGTTTGG                GGGA ACCG TCTC                 TTTCGTTAAAGAGAT  51 267
    AM1_0582  569092 ..  569106 +    -7  -3.59262   TAATCACCACATCTG               CGGCGG CGA CCACCG               TTTGAGAATCTGGAA  64 386
    AM1_0585  572748 ..  572759 +  -3.6  -3.14647   AAAGGGATATCGATG                GGGC AGCA GCTC                 TTGAATCTCCTCAAT  46 418
    AM1_0591 NONE
    AM1_0592 NONE
        glyS NONE
    AM1_0599  588512 ..  588527 +  -4.6  -3.93004   CCCCTAAATTCTTGT              CATGCC GCAA GGCCTG               TTTATAGGCTGTTAT  59 316
    AM1_0601  591634 ..  591665 +   -11  -5.43866   TTTCTCCGAATTATT      GTGATGCGGTCTGTT GGT ATCA-ACCGCATCAC      TTTTTTTGGGAATTC 100 54
        murI  593069 ..  593082 +  -3.1  -3.77241   TGGGGTGGCTCACGA               TCGAG CTGG CTTGA                TTTAAGTTGCAATTT  53 187
    AM1_0603  594224 ..  594246 + -14.2  -5.52384   GCATCAACCACAATA           GGCTTGGGAG CTG CTTCCAAGCC           TTTTTTTGATCAGGG 100 49
        thiL NONE
    AM1_0605 NONE
    AM1_0606  597397 ..  597421 +  -2.2  -4.71482   TAATAGAACTCAGGG         CAA-GCTTTCA GTTT TGACAGCATTG          TTTTTAAGATTTCGT  67 131
        argC NONE
    AM1_0610  601932 ..  601963 +  -6.6  -2.90901   AGGCTCCAATTCCAG      GTGGCTCGATTAAGC ATG GCTTGAGCGGG-CAC      TGTAGTTAGGAATGT  54 135
    AM1_0612  602972 ..  602997 +  -6.9  -3.68936   CTGTTTGAAGTAAAG         GATGTTGAGCC AGAG GGTTAAACATC          TTGTTGCAATTGATG  65 5
        psbP  603715 ..  603731 +  -6.5   -4.1673   ATTAGACTACATGGA              CGCGG TTATAGC CCGCG              TTTCTTGGGGAATTA  69 98
        hemF  605236 ..  605247 +    -3  -3.51597   CTAATCCTGCAAACG                TGAA GTAG TTCA                 TTGTAATTCCGAGTT  49 312
        mtaP NONE
    AM1_0618  606906 ..  606918 +  -3.4  -4.16016   TGCTAGGGAAGGAGC                TAGG CCAGT CCTA                TTTCTTCGGAGATAG  58 53
    AM1_0620  608728 ..  608759 +  -6.5    -3.767   CAAATGCTAAAAAAA      GAGCAGGGTTGGC AATTTA GCACATCCTGCTC       TTTAATAAATCCATC  65 49
    AM1_0623  611811 ..  611838 +    -7  -3.24735   AGCTATAAGATGATC        GGTTGCTTGATC AAAT GAGTGAGCAACC         TTGAGTATTTGAGTA  61 88
    AM1_0626 NONE
    AM1_0627 NONE
    AM1_0628  616477 ..  616494 +  -4.1   -3.1855   CCGGCACAGCTTTGT             GGTTCGT TCGA ACCAACC              TTAAATGTTAAGAAC  49 4
    AM1_0633  620732 ..  620749 +  -4.1  -3.54382   AAAACCTATTGTTTT             GGACCGA ATTT TTGGTTC              TTGATTATATTAGAG  52 284
    AM1_0634 NONE
    AM1_0635  623650 ..  623660 +  -5.4  -3.40522   TTTTCGGGAGTGTTC                 TCAG CAT CTGA                 TTGTACTGACAGGAT  54 359
         pgk  625200 ..  625229 + -22.3  -3.29511   TATAAAACATAGCGA       GAAAGGGGGGCTC AAAC GAGCCCCCCTTTC        TTGTCAAAAACTAGG 100 57
    AM1_0643  630084 ..  630094 +  -6.8  -3.69092   CTCTGGCTGCCGGGT                 CGTC GTA GACG                 TTTCCGATTGATCTT  63 75
    AM1_0645  633125 ..  633148 +  -4.6  -3.11302   TTTATGGCGCAAGGT          TCAGC-TCAAC AAT GATGAAGCTGA          CTTTTCACCTATTGG  51 11
    AM1_0646 NONE
    AM1_0647 NONE
    AM1_0648  636782 ..  636794 +  -3.3  -3.34715   CCACGGCATTCTAAA                GCTGC TTT GAAGC                TATTTCAGGGGGATA  47 27
    AM1_0649  637813 ..  637833 +  -4.7  -3.79687   CGTTATGTCCCGTTA            TCCAGAGAA AAA TTTGCTGGA            TCTTTTCTAAAAGAT  59 161
    AM1_0650  638618 ..  638644 +  -5.2  -3.83026   AGTACAGATCGCTCC         CTTGCAAAAATT TCA GATTTTTGCCGG         TTTACTCTGCAAAAG  61 39
        plsX NONE
    AM1_0653  641083 ..  641093 +  -3.2  -2.64912   GCGGCTATCTTTCAG                 TGGC AGC GCTA                 GTTGTCGGTTCACAA  42 14
    AM1_0654  642113 ..  642124 +  -5.8  -4.40804   CCCAAGTCTCCAAAA                CACC ACCG GGTG                 TTTTCTCCGCTGCTG  72 168
       opuCA  644478 ..  644496 +  -3.1  -3.29704   GGGCTGGGTGTAATA             GCTGG TGTCTGGTT CCAGC             TCTGTTTGCTGGGCA  47 307
    AM1_0663  648667 ..  648677 +  -3.2  -3.53026   CTAGGTCGACTCACA                 CCTT AAT GAGG                 TCTTCTATTTCGTTA  49 146
    AM1_0665 NONE
    AM1_0666  653048 ..  653063 +  -5.4  -3.48593   GGTGGGCATTCTGTT              CCCTGT ATTG ATAGGG               TTGTGTAGGGGCGTC  57 40
    AM1_0667 NONE
    AM1_0668  656583 ..  656596 +  -8.1  -2.65409   TGTTACGGTAAAATG               CAGCC TGTT GGCTG                GTGTTGTATTGAATT  60 406
    AM1_0670  657300 ..  657316 +  -2.2  -2.52464   CCGCTAAGCAGCTGT              CCCG TAATAATGC CGGG              TAGCTTAACCAGACC  39 208
    AM1_0673  658257 ..  658269 +  -5.5  -3.76492   AAAGTCTCGAAGATG                CCGTC TAT GATGG                TTTCCTGCCCTTGAA  59 60
    AM1_0674 NONE
    AM1_0675  662476 ..  662500 +  -4.2  -3.61178   AAGCAAACGAGAAAA          GCAGTCAATG AAGTA CACCGACTGC          TTTAAGGTCAATGAA  54 156
    AM1_0676  664129 ..  664154 +  -6.9  -4.58395   TGAGCTGAAAGGATG         TGCCATCATCG CGGG TGATGATGACA          TTTTTGCCCCGTGCG  77 317
    AM1_0681  668356 ..  668375 +  -3.6   -3.3344   TCCTGATGGAGCTGA            TTCAATGT CCCG ACACTGAA             TTCTGAGACTTCAAT  49 426
    AM1_0685 NONE
    AM1_0686  670273 ..  670284 +  -2.2  -3.44527   ACAACCTGGGTGTTA                CCAT AAGA GTGG                 TTGTGATAGTGGATA  47 186
    AM1_0687 NONE
    AM1_0688  671077 ..  671095 +    -6  -2.58544   CTCGAACCGACGACA             TTCAGCTT GGG AAGCTGAC             GTTCTACCACTGAAC  52 181
    AM1_0691  672246 ..  672256 +  -6.8  -4.12133   TCTAATTTTTTCAGC                 GCCT CAT AGGC                 TTCTTTAATCTTTCC  71 139
    AM1_0693  674746 ..  674758 +  -4.8  -3.51329   TCAGTTGGAATAACC                GCTG TATTT CAGC                TTGTAGTTGAGGATC  55 337
    AM1_0698  680812 ..  680826 +  -2.8  -2.83565   CCCCTGGCGTTTCTG               TTGAAG TGA CCTCAA               ATTATATTCATGGTT  42 17
    AM1_0699 NONE
    AM1_0700  683130 ..  683140 +  -6.8  -3.37612   CGGCTGGCCCTGATA                 GCTC ACA GAGC                 TTACTTAGGGTTAAG  59 388
    AM1_0703  686304 ..  686319 +  -6.2  -2.84422   TTAGAGAGGAAAGCA              CTTTTC TAAG GAAAAG               CTTTAGCGTTGTTTT  55 156
    AM1_0704 NONE
        leuA  688859 ..  688875 +  -2.2  -4.02051   TCAGCAATATCTGCT              GAACTG AAAAG CTGTTC              TTATTTAAGTTCATG  53 74
    AM1_0706 NONE
    AM1_0707 NONE
    AM1_0709  690785 ..  690799 +  -7.2  -2.81312   GGACAGCGCCGCCTT               CCAATT CAG AATTGG               TCTGGTCCATCGCTT  57 73
    AM1_0710 NONE
    AM1_0711 NONE
    AM1_0712  693872 ..  693882 +  -4.6  -2.53876   GTTCTAGGACCTGTT                 GGCG AAA CGTC                 TCAATTACAGTGGGA  46 299
    AM1_0714  696569 ..  696583 +    -5  -3.22906   CCAAACGGGCGCAAG               GGTTTA GGT TAGACC               GTTTTCTGAGCATCA  51 19
    AM1_0715 NONE
    AM1_0716  701482 ..  701498 + -12.3  -2.82803   CATTCGCCCCCTAAA              TCCCCCA TTC TGGGGGA              CTTTGACTATCGATC  89 239
    AM1_0720  705669 ..  705695 +  -2.3  -3.48276   GTTCCCCGAATATTG        TC-CTCCTTGGT GCAA GCCAAGGACCGA         TTGTCTACCCCAAAA  47 47
        aspH NONE
        aspH  707305 ..  707324 +  -6.4  -2.55015   AAAGGGACCCAATAG            CGCCGTGA CAGA TCATGGTG             TACATTGGCTGGAGT  53 26
        aspH NONE
    AM1_0724  710314 ..  710326 +  -3.3  -3.10622   GATTAATCTCTACAT                GCCAC CTT GTTGC                TGTTAAATAAATCTT  46 285
    AM1_0725 NONE
    AM1_0726 NONE
    AM1_0727 NONE
    AM1_0728 NONE
    AM1_0729 NONE
    AM1_0730  716277 ..  716298 +    -3  -4.10161   TAAAGGAGCACTTAT           CAAAACCC AAGTCA GGGTTTTA            TTTTCCCCACTGATC  56 299
    AM1_0732  717214 ..  717231 +  -5.5  -3.17492   TCATGTGGGACTTGT             CCAGCCA CAAA TAGCTGG              TTGCCTACTTGTTTG  52 365
    AM1_0736  717826 ..  717851 +  -6.9  -2.80338   GAGAAATGTCGTAAA         CGATGGAGTCTG TAT TAGACTCCG-CG         TCCTTAATAAATTGT  57 27
    AM1_0737  718158 ..  718169 +  -4.4  -3.88498   TCACCCTGTTTTTCA                CCTA TTCT TAGG                 TTTAATCTCTAGCCA  57 72
    AM1_0742  721175 ..  721186 +  -5.8   -4.2528   GATTGATGTTCACTT                TGGG AACT CCCA                 TTTCTTCGATTCAAG  70 119
         lys NONE
        dnaE  723934 ..  723945 +  -5.8  -3.89346   TATGCAAATTTCTGC                GCCA TAAT TGGC                 TTTATAGGCTGGGGG  63 128
    AM1_0745  724654 ..  724680 + -11.7   -4.2803   ACTTATATGATTAAA        CAGGGATAG-CC TATT GGTCTATCCCTG         TTTTGGCTTGAGCTA 100 79
    AM1_0746  725029 ..  725039 +  -5.4  -2.71011   AAGATTACAGTTAAT                 GTAG TCT CTAC                 TACTTGAGAAAAGAT  49 60
    AM1_0747  726368 ..  726385 +  -2.7  -2.80935   TAAGAATGTTTGGTA             TTTCCGA CAAT TGGGAAA              TCTAGTGGCTAAGAT  42 64
    AM1_0748  727198 ..  727213 +  -7.6  -3.34192   TGTCGATCAGCCCAT              TTGGGA GCAA TCCCAA               TTGATTGCCCAAGTT  66 153
    AM1_0749 NONE
    AM1_0750  730123 ..  730162 + -13.1  -4.39002   TCGGCCAAAACCATT  GGGAATACTAAGTTTGG CTGTCT CCGAACTTAGTATTCGC   TTTTGTGAGCCGTTT 100 110
    AM1_0751  733080 ..  733092 +  -4.1  -2.71712   AGCATGGAATAGTTG                GTCAT TTT ATGGC                GTTTGAAGGAACGCA  44 434
    AM1_0753  734651 ..  734662 +  -4.4  -3.13432   CGGAATCTTGATTTG                CCTA ATTT TAGG                 TTCCGTACTGTTGAG  49 117
    AM1_0754 NONE
    AM1_0755  736653 ..  736667 +  -5.7  -2.70979   CAAGATTCTTGTCGT               TGCTG AGCAG CAGCA               TAGGTTTGATTAAAG  51 351
    AM1_0757  738503 ..  738517 +  -7.8  -3.57798   ATGCTTAGATTAATC               GGGTTG GCT CAGCCC               TTCTAGTTGATTATC  70 412
    AM1_0759  739984 ..  739996 +  -5.5  -4.76963   AAACCGTCAATTTGG                CTCCT GGA AGGGG                TTTTATATTATCTGA  75 154
    AM1_0760  740426 ..  740453 + -11.4  -3.57797   ACAGAAGGCTATCCT        CCCCCTAAAG ATGCTGTG CTTTAGGGGG         TTCTCTACATTTGGC  90 141
    AM1_0766  744400 ..  744411 +  -3.6  -3.72984   GAACCCATCTGATGG                GTCG AGAC CGGC                 TTTGCATCATTATCC  53 29
    AM1_0767  745076 ..  745091 +  -4.6   -3.8917   GGGATATCTAATTAT              GGCTGT TTCA ACTGCC               TTCTTCTAATTAAGA  59 296
        lysC  748908 ..  748918 +  -4.6  -2.75577   TTCATCAGGCATTTG                 GCCT AGA GGGC                 TAGCTTTTCGGCTGC  49 12
    AM1_0771  750032 ..  750042 +    -4  -4.11216   GGAGTGCAAAGGTTT                 TTCT AGG AGAA                 TTTTCGGAGTAAGCA  61 80
    AM1_0774  753711 ..  753727 +  -6.5  -3.28924   CCTGCTTCTTCCTTC              GCTTTCC GCT GGACAGC              TTGTAAGGGGGACTC  59 400
    AM1_0778  756906 ..  756947 + -13.2  -2.84171   GCTTGATTCATTGAC GGGCCAGTCAGTCTTT ATGCCAGTGG AGAGACTGACTGGCTC  TCCCTTTTTAAAGGT  91 48
    AM1_0779  758452 ..  758472 +  -4.7  -3.28712   GCATAAATTAGATAC            CGAGATATG GCT CAGATCTTG            TTATCGGCAGGACAA  53 46
    AM1_0780 NONE
    AM1_0781 NONE
        ppnK NONE
    AM1_0783 NONE
    AM1_0784  763206 ..  763223 +  -4.7  -3.02946   ACTTGACAGATGACG             GGGCGGT TCCG GCCGACC              ATTTCTGGTTCGCAA  50 377
    AM1_0785  764041 ..  764057 +  -2.9  -3.14564   TAACTTCGCTAATTT              TTCGTGC TAC GTTCGAA              TTCCTGACCGCCTCA  44 47
    AM1_0786  765441 ..  765462 +  -2.3  -3.64812   AATCATCAGCTATTC           TGCTTCATG ATTT TATGAAGGA            CTTTTTTGCATAGAA  49 57
    AM1_0787  766193 ..  766209 +  -4.5  -2.65538   AAAGCAGCAAAACCC              TAAAACG GGC TGTTTTA              TGATCTGAAGTTGTT  48 162
        pepE  767229 ..  767251 +  -4.9  -3.27185   TCTGGCAATATAGAA           GCATTGAAT GGGGA ATGCAATGC           CTTTGTTTACCTCAC  53 28
    AM1_0789 NONE
    AM1_0798 NONE
    AM1_0799  777116 ..  777126 +  -5.4  -2.85351   AAGCGTATCTTTCTA                 GAAG CAG CTTC                 TGTCGTCTGACCAGC  50 5
    AM1_0801  777492 ..  777502 +  -5.4  -2.83748   GCTGCAAATAATTGC                 GAGA GTT TCTC                 TACTTCAGTTTCTAT  49 50
        rfbD  780072 ..  780092 +  -2.5  -2.60496   TTTCCACGGCGTAAC            CATGCGG ATCGGTG CCCCATG            CTGTTTCGGCAAGAG  39 278
    AM1_0805  782258 ..  782278 +  -2.5  -2.91322   GGGAACGGGGGAAAG            TTCTGACGC AGG GTCTCAGGA            TAGTTTAGAGAATAT  43 296
        ftsZ  783450 ..  783460 +  -2.4  -3.23611   TTCCTACAAAAGCGT                 CGTC CAG GTCG                 TTCCTAAGCTTTTTT  43 8
        prsA  784653 ..  784664 +  -5.8  -2.64333   CCGATCCCGATGTTC                TGGC AGGG GCCA                 ATCTTCATTTTCGCC  51 85
    AM1_0809  785947 ..  785958 +  -5.8  -3.14309   ACCCCGAATTTACCT                GTGC TTTA GCAC                 TATCTCTTAGTCTGT  55 74
    AM1_0810  786677 ..  786693 +  -6.5  -2.71745   AATCTTTGCTGGATG              GCTTCTG ATC CAGACGC              GTTGCTTGTTCCAAA  54 56
    AM1_0812  790489 ..  790499 +    -4  -3.07935   TAACGATTTAGGCCT                 TCAT CTT ATGA                 TTAAGTCAGTGAAAT  49 85
    AM1_0813  791534 ..  791565 +    -3  -3.73995   TCCGGGACCGGGCCA      TTCTCTATTAGGGT TCAT GCCGGGATAGAGAA       ATTTTTTCTCACAGA  51 105
    AM1_0814  793436 ..  793449 +  -3.8  -3.59262   CAGTGTCACTCGTAT               TGGC ATGATG GCCA                TTTGCAAGTGTGAAA  53 125
    AM1_0821  802687 ..  802714 + -18.6  -3.51924   CAAAAGAAGCTTTTC        GAACTCCCAGAG CCGG CTCTGGGAGTTC         TTCTATAGGTCCAGA 100 47
    AM1_0824 NONE
    AM1_0825 NONE
    AM1_0826  807109 ..  807129 +  -3.3  -4.99568   CATGAAAGTCAATTG            GTTTCATGA GTA TTATGTAAC            TTTTATTTCATCTTC  71 221
    AM1_0827  807953 ..  807980 +  -2.6  -4.09511   ACAAAAAAGCAGCTG        CCTTGGCCCAAA ACAC TTTCGGCCCAGA         TTTTGCCACCATGTT  56 524
    AM1_0831  811613 ..  811629 +  -6.5  -3.06762   TAGTTATGGCATTAG              GGCTACA CTT TGAAGCC              TATCTATCCTTGATT  56 265
    AM1_0832  815539 ..  815557 +  -3.8  -2.54387   AGGGATGATAGGTTT             TCGTGGAA GTT TGCCATGA             TGGGTTAAAGCTTTG  44 33
    AM1_0833  816425 ..  816437 +  -2.7  -4.26792   TTTGTATGCCCTCTA                GTTTG TTG TAAAC                TTTTGGCATTTCTAT  59 25
    AM1_0834 NONE
    AM1_0835  819496 ..  819509 +  -2.3  -2.98223   AGTCTCCTCCCCTAT               CCGCT AGCT AGAGG                TGTCTGGTGTCCCTA  42 46
    AM1_0836 NONE
    AM1_0837  821462 ..  821486 +  -7.2  -3.34895   ATCACTGAATTGACC          TACATGGGGA CGAAT TCCCCATCTA          TTAATTACAGGTCCA  64 119
    AM1_0840  822294 ..  822310 +  -3.7  -3.53444   CCGCCAATTCCACCA              CCAACTT ACC AATTTGG              TTTGGGGCCACCTGG  50 291
    AM1_0841  824149 ..  824160 +  -5.8  -3.76952   CGCTATCTTCAGCAT                CGGA TGAG TCCG                 TTTCGGTTGCATCGG  61 125
    AM1_0843  825015 ..  825028 +  -8.1   -4.2123   GAGTGCCCAATAAAT               CCGAG CAGG CTCGG                TTTCTTCCCTAAGTG  76 0
    AM1_0844  825768 ..  825794 +  -2.3  -3.34398   TGAGCTGGTGCCACT        CTGTTTCTCGGA TTCA TCTGTGA-ACAG         TATTTGGGCAGAAAG  45 220
    AM1_0851  831387 ..  831404 +  -5.6  -3.54638   CGATGCCTTGGCCTT             GAGGTA AACTCA TACCTC              TTTGGGCAAGCTTCT  56 281
    AM1_0853  832927 ..  832943 +  -6.6  -2.64803   GATTTGAAACATAGG              GTTAGG CAAAT CCTAAC              TCCCTTTGAAGATGC  56 56
        purE NONE
         alr  837602 ..  837613 +  -5.8  -3.28924   CGTATAAGGCTTAAG                GGAG AACC CTCC                 TTCTGAAGCCACATG  57 155
    AM1_0865  843891 ..  843901 +  -6.8  -3.09562   ATTTCTATTAACACT                 GGCT GAA AGCC                 TAATTTAGTTATTTT  59 128
    AM1_0866  846562 ..  846588 + -13.8  -5.06816   TACTCACTTCTCTGT         GCGGTAATTGGC TTT GCTGATTACCGC         TTTTTGTTGGGGACT 100 80
    AM1_0870  849686 ..  849699 +  -2.3  -3.38522   TCGCCTGTTGGCGAC               GGTAG ATTT CCACC                TGTTTCAACTGCCTG  45 155
    AM1_0873 NONE
    AM1_0874  851405 ..  851417 +  -4.1  -3.28924   CTTCTATTGCAGCAG                GATTC ATG GGATC                TTCTAGCAAGCGATA  51 99
        cysH NONE
    AM1_0877 NONE
    AM1_0878  854200 ..  854211 +  -2.2  -3.59087   GGCGTATCAACTCAG                CTAG CAGT CTGG                 TTTGGAAGTAATGTT  49 22
    AM1_0879 NONE
    AM1_0880  854899 ..  854920 +  -3.6  -3.75332   CCCGTCAATTGCTTC           GCATCTGC GGGCAA GCAGGGGC            TTTGGGTTGAGCAAT  56 49
    AM1_0883  856583 ..  856595 +  -9.1  -2.71712   GATGACTTGCCAGAG                GGGAC AAA GTCCC                GTTTGGACACGGCGC  63 202
    AM1_0885 NONE
    AM1_0886  858732 ..  858745 +  -3.1  -3.59738   TCTTGATTTATTGGA               TACAG TATT CTGTG                TTTACAGATCTAGTC  51 136
    AM1_0887  859125 ..  859137 +  -4.9  -3.66178   TGTTTACATATCAGG                TCTAA TTA TTAGA                TTTCCAATTAAACAC  57 155
        atpI  862196 ..  862210 +  -5.7  -3.57792   TAATTGGTTCACCGC               CTTGC CTTTA GCAAG               TTTAGAGGTGGGTCA  61 131
        atpB  862933 ..  862947 +  -7.2  -2.54896   AACCTCAAAGTCACG               TTACTG AAA CAGTAA               TCGATTGGCTCCAAA  58 39
        atpE  863308 ..  863328 + -11.2  -3.50449   TAAACAGGTTAGTGA            GGGACGTT CGCGT AACGTCCC            TTCTCCGTTTCTAGT  83 38
    AM1_0893  863896 ..  863915 +  -2.2  -3.05384   ACCGCAGTTAGGACT            ATAAACAT GGGG ATGTTTAA             TTGGCTGGCAAGCGC  42 52
        atpF NONE
        atpH  865021 ..  865043 +  -2.7  -3.33509   GCCTGTCTTAAGGTA           ATGGCAATT TTCTT AATTGCCGC           TTAAGTTGTTTGACC  46 30
        atpA NONE
        atpG  867631 ..  867655 + -15.1  -3.63805   TATATTCCCCGTCAG          CCCTGGTTCAG TAT CTGAATCAGGG          TTTCCCCTATCGCCT 100 86
    AM1_0900  868992 ..  869005 +  -5.3   -3.1544   TCTACCTTCACTCCG               TCGAA AGCA TTCGA                TTCGCTGTCGTCTAG  52 169
    AM1_0901  870160 ..  870170 +  -3.2  -3.55563   CTGGGTTCCAGTTAT                 CTGT TGA ACGG                 TTTGCAGACTGAAAT  49 3
    AM1_0902  871512 ..  871523 +    -3  -4.09276   GACTAGGATCTGGGG                TGAT AGTG ATCA                 TTGTTCTGTTTGTTG  58 66
    AM1_0903 NONE
    AM1_0905  873482 ..  873492 +  -2.4  -3.73953   TAAATCAAACGGATG                 CTGG CCT CCCG                 TTTGCTGGCGATCAT  50 439
    AM1_0906  873979 ..  873994 +  -6.2  -4.25681   TGTGGATGTAGTAAA              TGCATA TTCC TATGCA               TTTGTTGAGTTAGCT  72 259
    AM1_0907  874889 ..  874926 + -18.7   -3.1033   ACAATTTTTTACAGA   CTAAAAGGCTCATGGCA AAAT TGCCATGAGCCTTTTAA    ATTTATATATACTTT 100 157
    AM1_0908 NONE
    AM1_0909 NONE
    AM1_0910  877710 ..  877722 +  -7.7   -3.1855   TTTTATTTCTTCTAA                GGTTC ATG GAACC                TTGAGTCTTCCAAAC  62 144
    AM1_0912  880190 ..  880239 +  -8.5  -4.82901   GCCTAATTAGACGAC CGATGGGTCAAAGCAGAATTAGG TATG CCTAAGCCAGCTTTGACCCGCCA TTTTTATACAACACC 100 35
    AM1_0913 NONE
    AM1_0914  884445 ..  884462 +  -7.7  -3.81414   ACATCTAACTGTTTA             TGGAGGT AAAA GCCTCCA              TTATTCCTTAGAGAT  72 150
        amtB  887402 ..  887422 + -16.9   -4.8622   ATTCAATATAGAAAA            GCGGCTGTC GAT GACAGCCGC            TTTTTAATTCCGAAA 100 86
    AM1_0924  893647 ..  893679 + -20.8  -2.79796   CGCTCTGTTTTTTAA      CAAGACAGCCCTCT AGTTC AGAGGGCTGTCTTG      TATGGTGCGCTAAAG 100 48
    AM1_0925  895179 ..  895190 +  -7.2  -2.94925   CGCTTGGCAAGCTAG                GGCG TAAG CGCC                 TCTGTGCTCAACTCT  61 19
    AM1_0928  896148 ..  896160 +  -2.7  -4.80737   CTGCATAACGTTCGC                TATCA TCC TGATG                TTCTTTTTTATCTTC  67 33
    AM1_0929  897774 ..  897789 +    -9  -5.88565   ACATGAGCTTCCAAG              GTGGGT ATTA ACCCAC               TTTTTTTATTGTCAG 100 135
    AM1_0930 NONE
        nusA  899816 ..  899831 +  -4.7  -3.35046   TGACAAATCATCATT              TGCCA GCGCCA TGGCA               TCTTTCAACCAATGC  53 139
        infB  903115 ..  903125 +    -4  -4.67943   CGCAGCGACCTAGCC                 TGAA TCC TTCA                 TTTTCTGTATTCCCG  68 28
    AM1_0933  903914 ..  903926 +  -9.1  -3.35996   CAGGAGGTGCCCCAT                GGAGC CAT GCTCC                TTCTGCATAGGCATG  69 368
    AM1_0938 NONE
        petL  907814 ..  907848 +  -4.9  -3.32518   ATTCCTCTGAAAGCT     TGGCCGGAATATAGG ATTCC CCAAGCTTTCGGCCA     TGATTTTTCGTTCGA  53 50
        gatB NONE
    AM1_0941 NONE
    AM1_0942  910877 ..  910897 +  -3.9  -3.38072   CTTTGGCGGCTAGGG            CGGCAAC CACGAGT GCTGCCG            TTGCTCTTAAGTCAG  50 237
    AM1_0944  913159 ..  913181 +  -3.3  -4.06148   AAGATGATGGTGATT           GCTGTGAGG TGTCT CCACAAAGC           TTTATGTGGGCTGTT  56 51
    AM1_0945 NONE
    AM1_0946  916028 ..  916043 +  -4.7  -3.04322   GTGGTTTAGCTGTGC              CCTGA ACAATG TCAGG               TATTGGAACATTGAC  50 32
    AM1_0947  916695 ..  916709 +  -2.8  -3.37796   GAGAAAGGCTGAGGT               CCTG CTTAGGC CAGG               TTATCCCTAGTCACA  46 49
    AM1_0948  917655 ..  917675 +  -5.3  -3.40403   ATTAAATCAATCATG            CGATTGGAG TAA CCCCATTCG            TTGTCATACCAAGCC  54 119
        pykF  920510 ..  920523 +  -2.3  -4.89852   ATTTAGCGCTTTTTT               TGGCG CAGC CCCCA                TTTTTGTAGCTCTAC  66 45
    AM1_0952  926745 ..  926758 +  -3.9  -2.62184   TGGCATCAAATAAAG               TCATT GCAG AATGA                TGCTATAGACGACGA  44 75
    AM1_0953 NONE
    AM1_0955  929906 ..  929925 +  -3.5  -4.49311   AACCAGCAACCACCG            CCCCC GTTGGTTATA GGGGG             TTTTGTGATGCTCAT  66 224
    AM1_0956  930590 ..  930600 +  -3.2  -3.61398   CGGCTGCAGAATCCA                 TCGC TGC GTGA                 TTATTCCCAACGCAA  50 224
    AM1_0959  935061 ..  935082 +  -2.9  -2.61582   TTGTGGGGAATAGTA           CTGAATGCT GTTG AGCAATCCG            ATTGTGGCTGAGATG  41 104
    AM1_0960  936691 ..  936702 +  -4.4  -3.23393   TCCCTTAGCATAGCC                CTCA ATTT TGAG                 TATTCTAGGCTAACA  49 71
    AM1_0961 NONE
    AM1_0962  938188 ..  938204 +  -6.5  -2.84098   AAAACTCCGTGTAGG              CCAACTG CCA CAGTAGG              TAATTACTTAAGCGG  54 217
    AM1_0965 NONE
    AM1_0966  942800 ..  942827 +  -3.5  -3.53012   GATAGTCCCAGTCAG        CTTGA-AACCCT TGCAT AGGGTAATCAAG        TTTCCCACCAGAAAG  50 332
    AM1_0968  944312 ..  944324 +  -4.1  -3.21704   TGACGATACGTTTTC                TCAGT GTT GCTGA                TTCAATCTGTTCTTC  48 279
    AM1_0970 NONE
    AM1_0971  946544 ..  946554 +  -6.8  -3.73953   GCATTACTTAAATCC                 CGCT AAT AGCG                 TTTGGTGGGCCTCAT  65 20
    AM1_0972  947767 ..  947780 +  -5.3  -3.61506   GCTAAAAGAAAAATG               GACTA GCTC TAGTC                ATTTTTTAGAAATAC  59 46
    AM1_0973 NONE
         kmo  950240 ..  950252 +  -3.4  -4.82901   CATAATCTCGACCAC                GTCT CGCCC AGAC                TTTTTATCCAAAGCG  69 202
    AM1_0981  956252 ..  956263 +  -4.4  -3.11569   TGAAATATTTGGCCA                TGAG CCGT CTCA                 CTTTTGGGTCCATCG  49 71
    AM1_0982  956868 ..  956909 +    -9  -2.94622   AAATGCATTTCACAA TCAGCTCTTCAGAAAA GCCAGATTAA TTTTCTGAAAAGCTGA  TGTATAGCTATATCT  68 104
    AM1_0983  957796 ..  957813 +  -4.2  -3.65902   AGCTTCCCAATGGTT             TGGTTT GGCATG AAACCA              TTTAGGTGGCATAAG  54 3
    AM1_0984  958544 ..  958559 +  -6.2  -3.65314   AGATCTATCTGCAGC              CCAATA TGGA TATTGG               TTATTACAAATTGGC  63 59
    AM1_0985  959247 ..  959258 +  -4.4  -4.36914   AACGCTCTTGCGATC                GCAA CCCG TTGC                 TTTTGTCCCCCAGAC  65 310
    AM1_0989  962958 ..  962975 +  -6.3  -3.63627   CCTGTATTTGAAGGA             TTGAGCC GATG GGTTCAA              TTTAGAATCTGCCCA  63 130
    AM1_0990 NONE
    AM1_0991  964788 ..  964801 +  -6.7  -3.96148   ACATCTTGCACAATC               CGAGA TAGG TCTCG                TTTCTCATCCAAGGA  66 79
    AM1_0995  968585 ..  968599 +  -2.8  -2.57067   GCAAAAAAGGTAAAA               TCGG CACTTGC CCGA               TGCCTTAACTCTTAG  41 28
        glgB  971021 ..  971036 +  -2.4  -2.52543   TAACTTAAGAAGAGG              ATGCCC GTAT GGGCGC               TACGTTAGAGCAAAT  39 95
    AM1_0997  971785 ..  971801 +    -5  -3.32022   GTTGATAGTTTTGTT              GGGGCG ACTGC CACCCC              TTCATATCTAGACGA  52 206
    AM1_0999  973544 ..  973569 +  -4.1  -3.30124   TGGGAATGGAGATCA         TAATG-TCCTCA CAG TGAGGAGCAATA         TTCTCCAAAATGGCA  50 157
    AM1_1001  974152 ..  974167 +  -4.6  -4.08144   TCCTCCACCGTCAAT              GTTCGG ATTG CCGATC               TTTGTCCTTCATAAA  63 198
        cysE NONE
    AM1_1003  975310 ..  975326 +  -4.4  -3.86897   GTCAATCACTTGATT              CGTTCT ATTCA AGAGCG              TTTATAGCAGATCAA  57 2
    AM1_1005  976255 ..  976276 +  -2.9  -3.39936   TCAACCTTTGGTTAA           CAGATCCTT GCTC AAGGAGCCG            TTATGAGGTTTGAAT  46 26
    AM1_1012 NONE
    AM1_1013 NONE
    AM1_1014 NONE
    AM1_1015 NONE
    AM1_1016  985732 ..  985747 +  -5.4   -2.6296   AAATAATGTATTGGG              GGAGCA AGTA TGTTCC               GTTGGTTAAAATTTC  49 496
    AM1_1017  988768 ..  988797 + -13.8   -3.3482   GATCCATTCACACAA       TAAGCTCTGGTA GACAAA TACCAGAGCTTA        TTAGTTACAAGATTG 100 41
    AM1_1021  990795 ..  990813 +  -3.9  -3.25823   TAACAGAGAATGTGG             GTAAATC TTAGT GGTTTAC             TTGATCTCACAGAAG  49 15
    AM1_1025  995362 ..  995377 +  -4.7  -2.93393   TGCCGGAATAACCAA              CAACG ATTGAC CGTTG               ATTTGTCCCATAGAG  50 16
    AM1_1026 NONE
    AM1_1027 NONE
    AM1_1028 NONE
    AM1_1029 1001273 .. 1001283 +  -5.4  -3.08133   ACTCTTTCGCATTTT                 TCAG AAA CTGA                 TTCCATGAATCCATA  51 370
    AM1_1033 NONE
    AM1_1036 1004672 .. 1004685 +  -2.3  -3.06315   GCTGGGCCACTTCCG               ACTCG CGGG CGAGC                TGTTCCAAGTCTTCC  42 127
    AM1_1038 1010636 .. 1010648 +  -4.9  -3.55563   GATGTCTATAGCCTA                TACTT ATC AAGTA                TTTGAGCCCTCCCCT  55 122
    AM1_1039 1011004 .. 1011027 + -10.4  -3.54424   TATTGGATAACACTT          TTGTCCTGAA CTGT TTCAGGGCAA           TTTGCAAAGGTGAGA  80 71
    AM1_1040 NONE
    AM1_1041 NONE
    AM1_1042 1012681 .. 1012701 +  -9.9  -2.60075   TTCGATGATTAATAA            GTAATACTA TAT TAGTATTAC            ATTGATTAAGAGAGA  71 71
    AM1_1043 1012944 .. 1012955 +  -3.6  -3.25604   CCTTACCAGAGAATA                GTCG TGAA CGGC                 ATTTTGGTTGACTCA  49 25
    AM1_1044 NONE
    AM1_1045 NONE
    AM1_1046 1014296 .. 1014328 +  -6.9  -2.94099   TATGCTCCGGTTTGC      CTCTGCTGTAGGCGT TAG GCGCACATGGCAGAG      TATCTGATCCGACAG  58 70
    AM1_1047 NONE
    AM1_1048 1015276 .. 1015287 +  -2.2  -5.13343   ACCTGGGCTATTTGT                TTCG TCTT CGGA                 TTTTATTTTGCCTTG  71 387
    AM1_1049 1015854 .. 1015865 +    -3  -3.84633   AAAATACGTTCATAA                CAAA ATAT TTTG                 CTTTTTTTGGAGATA  53 372
    AM1_1050 1016552 .. 1016564 +  -7.7  -5.09426   GAGAGATCTACTTGA                GCCAT AGA ATGGC                TTTTTTAAAGTTAGA  95 93
    AM1_1051 1017829 .. 1017845 +  -5.1  -3.37622   TTAATATCTTAGCCG              CCTAGAG TAT CTATAGG              TTATGCCTCACTGTT  55 21
    AM1_1053 NONE
    AM1_1054 1021103 .. 1021121 +  -3.1  -4.62336   CTTTGAACAGCTGCA             CGATGCT TAGAT AGCGTTG             TTTTTAGGGTGCCAT  65 492
    AM1_1059 1027977 .. 1027988 +  -5.8  -4.07568   ATGACGTAGCCTTTA                CCCT GAAA AGGG                 TTTTGCCAGGAGGGA  66 232
    AM1_1060 1028884 .. 1028897 +  -2.4  -3.12256   AATCAGTAAATTCAA               TGAG TTCATC CTCA                CTTTGTTCACTGAAT  43 376
        uppP 1033655 .. 1033667 +  -4.1  -3.35996   AATTAGCAGGCACGA                GTGGA TCG TCTAC                TTGTAAATGCAGCTC  50 272
    AM1_1069 1037285 .. 1037295 +  -5.4  -2.76453   GTGGCAGGCTTCCAG                 GATC AGC GATC                 TGCTTAAACTTCTAA  50 8
        glcD 1039001 .. 1039018 +  -6.9  -2.66634   AATGTTCAATTTCAT             CGGAAGC TTGT GCTGCCG              TGCTCTGCTGCAGTA  56 85
    AM1_1071 1040704 .. 1040714 +  -6.8  -2.71924   CGTATGCGAGAAAGA                 CACC GCC GGTG                 CTTTCACCAGCGATC  56 525
    AM1_1072 1042491 .. 1042504 +  -3.1  -3.39556   AGGACGTTGTTGCTT               GG-GAG TAA CTCACC               TCTTCTTCGCCAATT  47 346
    AM1_1076 1046072 .. 1046085 +  -6.7  -4.17491   GGTTGTGTTCTAGCC               TTGGC AGCA GCCAA                TTTTGCCGCTTTCGT  71 522
        psbD NONE
        psbC 1053014 .. 1053045 + -16.8  -3.47387   GAGTAATATCGGCAA      GAAAGCCCCTGCCTA AAA TAGG-AGGGGCTTTC      TTATGAGTATTTTCG 100 70
    AM1_1085 1053499 .. 1053517 +  -3.2  -2.78891   CCTTACCCAATGGGT             GAAACAAA ATA TTTATTTC             TGATTGGATTGAACT  43 182
        secA 1056719 .. 1056738 +  -5.8    -3.551   GTATTGGATGTCAGA            TTATGGAT CTGG GTCCATAA             TTGTCTGGATTGAAC  59 407
    AM1_1090 1063386 .. 1063401 +  -3.2  -3.20588   GGCGATCTTGTATAT              GGAATC AAGT GATACC               CTTTTAGTCTCCCGT  46 145
    AM1_1092 1064630 .. 1064655 +  -8.3  -3.85254   ACTACCACCCAATGT         TTGTCCAGGTC GGCA GCCTTGGACAA          TGTTTTCTAGTGGTG  73 292
        argJ 1070245 .. 1070256 +  -4.4  -3.03151   TTTTCGTAGATGATG                GGTA GCCA TACC                 GTTTAGTTTCACAAG  47 115
    AM1_1095 NONE
    AM1_1096 NONE
    AM1_1097 1071807 .. 1071817 +  -2.4  -3.14564   ATTTGATCTCAGCTA                 TCCC CAA GGGC                 TTCGTCAAAAACTCG  43 126
    AM1_1102 1075325 .. 1075337 +  -5.5  -4.02132   ATATGGGGGCTTTGG                GCTCT TCC GGAGC                TTTGTGGGTTTGGGG  64 401
        menA 1089449 .. 1089459 +  -3.2  -4.36863   CTTAACACCCATCGG                 TTGG TCT CCAG                 TATTTTTTGTCTTGC  61 298
    AM1_1111 NONE
    AM1_1112 NONE
        ppnK 1092819 .. 1092843 +  -4.2  -5.19261   TCCCCTCTTTTATAG         CACCGAC-CTC TTAA GGGTGACGGTG          TTTTTTAATGAATTT  78 354
        psaK 1098255 .. 1098282 +  -9.2  -4.52857   ACTAGATTCGGTCAA        GCAGTCAG-GGTC TCA GATCTCTGGCTGC        TTTTGTATGGCGGGT  95 73
    AM1_1122 1098984 .. 1098995 +    -3   -3.9534   AGCATTGGTGTTTCT                TTAC GAAG GTAA                 TTTCTGAATATAAAT  56 7
    AM1_1123 1099823 .. 1099849 +    -5  -2.88999   GGCAGCGTTCATCAA         ACGTCTGAGTAC CGT GGACCCAGACGA         TATCGTCTATGCGGA  49 472
    AM1_1124 NONE
    AM1_1125 NONE
    AM1_1126 NONE
    AM1_1127 1103164 .. 1103186 +  -2.7  -3.10796   GTGATTCCACCCCAT          TCAGATGGTG GAAT CACCACC-GA           TATTAAATCCTGGCA  44 70
    AM1_1131 1105394 .. 1105404 +    -4  -4.24342   ATATATCTATTCTGA                 TTGA AAC TCAA                 TTTGTTGATAAAAGC  63 483
    AM1_1134 1107416 .. 1107431 +  -6.2  -3.51407   CAGCGCAGCGATATT              CAAAAC CCCC GTTTTG               TCCTTTTTCTTTTAT  61 43
         hli 1108581 .. 1108596 +  -3.3  -4.59773   AATAGCATTTTCAGG              GATTG ATGGAG CAATC               TTTTTCGCAATGAAG  65 36
    AM1_1136 1108702 .. 1108715 +  -2.5  -3.14848   GTCTCAACGCCATTC               TTTTT AGAT AAAAA                ATTTTGCTGAACCAC  44 2
    AM1_1137 NONE
    AM1_1144 1113661 .. 1113690 +  -9.3  -5.28826   TTTCACCAATATTCA       GGGGACTCCAG CAAACAGC CTGGGGTCCTC        TTTTTTATGAGGTTT 100 481
    AM1_1145 1114496 .. 1114518 +  -7.7   -3.7941   TAATGAAATTTGCAC           GCACCCC AACAGGAAA GGGGTGC           TTGTTATGAGAAATC  72 38
    AM1_1146 NONE
    AM1_1148 1115797 .. 1115812 +  -5.4  -2.92935   TGAGAACTAGATAAT              TGACGC TTAA GCGTTA               TGATTTCACCGTTGT  51 281
    AM1_1153 1122466 .. 1122486 +  -4.7  -4.17296   GGTTCTTGTAGCACA            TTAGCTCGT AAA GCTAGCTAA            TTTATCTATCTCAAC  63 5
         hup 1123195 .. 1123210 +  -3.2  -5.53991   CATCATTCAAAGCTC              GGCTGA AATT TCAGCA               TTTTTTTGGTGGCTA  82 208
    AM1_1156 1125392 .. 1125409 +  -4.1  -4.17491   AGAATCCTTCTAGCC             CCAGCAG TTGA TTGTTGG              TTTTAGGAATTTCAT  62 194
    AM1_1158 1127065 .. 1127089 +  -2.1  -3.25538   GCCTTGGATCGCTCT         GAGCA-TCGG TAACTC CCGATTGCAC          TGGTTTTATTACGAA  45 50
    AM1_1159 1128103 .. 1128114 +  -2.2  -4.00084   GAGTGATAACCCCGT                TTCC TCAT GGAG                 TTCTCTTTTGATACT  55 277
    AM1_1162 1129364 .. 1129384 +  -6.1  -2.57522   GCTAAACAAGCCCTT            CAGCGGTTT CTC AGGCCGTTG            GTTCCTCTGAATTAG  54 36
    AM1_1163 NONE
    AM1_1164 NONE
    AM1_1165 NONE
        putP NONE
    AM1_1167 1137964 .. 1137974 +  -2.6  -4.46215   ATAAAAGCATATAAA                 TAAT AAT ATTA                 TTCTTTTTCAATATA  61 95
    AM1_1168 NONE
    AM1_1169 1138937 .. 1138951 +  -7.2  -2.63089   TAGATTGACACTATT               CTCAAT GAG ATTGAG               CTATTTAGCATCATG  58 119
    AM1_1170 1139357 .. 1139371 +   -10   -2.8655   TATCACTCAAACTAC               TTCGCC ATT GGCGAA               TGTCGTCTGCATAAA  68 158
    AM1_1173 1141176 .. 1141191 +  -7.6  -2.59431   AGGCTAGGGCAGGCC              TGGGTT GAGG AACCCA               TGACTTGTCCAAAGG  58 241
    AM1_1174 NONE
    AM1_1175 NONE
    AM1_1176 NONE
    AM1_1177 NONE
    AM1_1179 1145979 .. 1145989 +  -3.2   -3.6502   ATACGACCCGGATTG                 TGGG GTA TCCA                 TTTCACTAACGCCTG  53 509
    AM1_1181 1147495 .. 1147517 +  -4.8  -2.91912   TGTACATCATCACTG           CCCTGATCTT GAA AAGAGCAGGC           TATATCCCTCACTCC  50 50
    AM1_1182 1148643 .. 1148655 +  -7.7  -2.63891   TGCTCATTTCAGTTA                TTCCG CGA CGGAA                CTCTATTTTACCACT  60 403
    AM1_1185 1158313 .. 1158344 +  -6.7  -5.33331   CGCCTTGGATGCGTT      GATTTCAGATTTG AACTCC CTGATCTGAAATC       TTTTTCTTGTGTTTA  89 71
    AM1_1186 1167721 .. 1167731 +  -6.8  -2.87354   AATAGTGCCAGGAGA                 TCGG CTT CCGA                 TAGTTGGTTAATTCC  57 104
    AM1_1190 NONE
         por 1172512 .. 1172541 + -15.1  -2.66272   CTTCCGTATCAAATC       AAGAACGCCGTAG GATT CTACGGCGTTCTC        TCGATTTAAATCAGG 100 49
    AM1_1198 1178341 .. 1178391 +  -2.5  -3.84406   AGCCTCAGCATCATT TCCCAATCCACAGCCAATCACCAG GGCT TTGCTC-TGGGCTGGGGGTTGGGG TTGTTCTGGTAGCCA  52 469
    AM1_1200 1179758 .. 1179772 +    -5   -2.6063   CTTTTCTTTGATCAA               TATCGA TTC TCGGTA               TAAATTATCCGTGAA  48 173
    AM1_1201 1180381 .. 1180403 +  -2.7  -4.20367   AGCCAATAAGATTGC           GAGCGCT ACCAGCAAC AGTGCTC           TTCTTTCTTGGACAG  57 203
    AM1_1204 1183315 .. 1183327 +  -5.5  -3.48288   GAGTGATAGTAAGGT                GGTGA GTT TCGCC                TTATGCTCTCCATTA  56 79
    AM1_1205 1188088 .. 1188100 +  -3.4  -3.98282   CACAATCTCAACGGC                GGAA GTCAG TTCC                TTTAATTCATCTGCC  56 108
    AM1_1209 NONE
    AM1_1210 NONE
    AM1_1211 1192427 .. 1192446 +  -9.3  -3.58905   ATGCTTTGATATCCC            CCTCCAG AAAAAA CTGGAGG             TTCTATCTGCAGGCT  78 169
    AM1_1214 1195612 .. 1195634 +  -8.5  -4.86731   CTGAAGATTGAACAA           TGCGATGGT CTCTA ACTATCGCA           TTTTCTTTGACAAAC 100 113
    AM1_1216 1196754 .. 1196766 +  -2.7  -3.20991   CATTAAAGTCACAAG                GTTTT GTA AAAGC                TTAGCTTGACTTGAA  44 80
    AM1_1226 1206348 .. 1206361 +  -2.3  -3.63515   GATTGAGGCGGATTA               GTGCA AGCT TGCCC                TTATTGCACCTAAAA  49 25
    AM1_1227 1206918 .. 1206929 +  -2.2  -3.85698   ACTGCAGCTTGATAG                TCCT CAAT GGGA                 TTTGTGCGCCAACCC  52 299
    AM1_1235 1212483 .. 1212498 +    -4  -3.74238   AAATCCATTGAGTCT              TATCCT ACAA GGGATA               TTTCAGATTCTTTAG  57 245
    AM1_1239 1225506 .. 1225530 +  -3.6  -3.37537   ACAGACCATCCACTA          GATATTGCAT GCAAA GTGCAAAATC          TTCGCTTTTGCGATG  48 366
    AM1_1242 1227954 .. 1227987 + -13.3  -3.65425   TCAACCGTTTTTATA     GCTCGTATGGGTCTAT ACA ACAG-CCCATACGAGC     TTTGAGATATCTGGA 100 93
        thrC 1232137 .. 1232157 +   -14  -3.24747   CTAAAAAAGCGCCAA            CCCTGCCC AGTTA GGGCAGGG            TTAATGCTCTCAAGA 100 37
        metH NONE
    AM1_1257 1243237 .. 1243254 +  -2.6  -4.67755   ATTGCGGTTTAGGTG             CATGGG CCTCAA CCCAAG              TTTTTAGCTCCCTAT  68 144
    AM1_1260 1246503 .. 1246515 +  -3.4  -2.60244   CACACAGTTTTGCTG                CCAA TTTTT TTGG                TGGATTAGTTCGACC  42 406
    AM1_1263 1252496 .. 1252508 +  -6.3  -2.89475   GGCTTTAAATTTCTG                TCCAA TCG TTGGA                TCTGCTGTGTAGCTC  54 282
    AM1_1270 1259530 .. 1259543 +  -4.5  -2.59069   CGTTAAATACTGGCA               CTTGG CCCC CCAGG                ATAATTTTTCTGGAT  46 383
    AM1_1272 1261487 .. 1261499 +  -5.5  -3.88291   TGGGGTTTCATGGCA                CTTGG CAG CCGAG                TTTGTAACCCTCATC  61 6
    AM1_1273 1263824 .. 1263865 +  -6.6  -4.64992   CAAAATTTGGCCTTT GCTGACGTACTGGAGAAG GAATAG CTTTTTCAGTGGGCCAGC  TTTATATTTTTTACC  79 2
        serA NONE
        prmA 1266893 .. 1266905 +  -3.5  -3.82097   TAGATATATAGGCCT                TTTTT ATC AAAAA                TTTAGTCAATTTGGA  56 412
    AM1_1276 1270085 .. 1270095 +  -2.4  -2.67981   ACTTTCCAACCTATA                 AGCC AGA GGCA                 TGAATTTGGTAGGAT  40 154
         hit 1271834 .. 1271858 + -15.9   -3.5616   TTACCTACAAAAAAA          TCTGCTAGTTC TAG GAACTAGCAGA          TTATAAATTTTTAGA 100 49
    AM1_1280 1273432 .. 1273446 +  -5.7  -2.66235   TTCAATCACTGGGAT               CCATC TGTTC GATGG               CTTGATTGATATCTC  52 145
    AM1_1281 1274987 .. 1274997 +  -6.8  -3.34894   CTTGGAGGGTCCTTT                 CGCA TGC TGCG                 TGTTTCCCCACGATT  61 174
    AM1_1282 1276596 .. 1276611 +  -4.6  -4.09685   CGTTCATCTGCCCTT              GGGCTG CAAT CAGCCG               TTTTACCCAATCGGC  62 366
    AM1_1284 1279020 .. 1279047 +  -4.2  -4.86621   ATCAGACAAGGCTTT        CAGAGGAC-GTTT CAC GAGCAGTTCTCTG        TTTTTCATTGGGCCT  71 198
    AM1_1286 1280792 .. 1280806 +  -2.1   -3.1733   AATCTCCTTGTTTAA               GTTCT GGAGG AGGAC               TACTTTTATCAGGGC  43 480
    AM1_1290 NONE
    AM1_1291 NONE
    AM1_1292 1284796 .. 1284818 +  -9.2  -3.65812   ATTCATTTATCCCAT           CACCGATGAA CCA TTCATCTGTG           TTGTATTCCCGCAGA  78 115
    AM1_1293 NONE
    AM1_1295 NONE
    AM1_1296 NONE
    AM1_1297 1288117 .. 1288129 +  -3.3  -3.35438   TCTAGGAGAGTGTTA                TCACC GTC GGGGA                TTCTCCAATCTGATA  47 461
    AM1_1300 NONE
    AM1_1301 1290347 .. 1290364 + -12.7  -5.49234   TAAACCCTTCTTAAA             CCCAGCC AAAA GGCTGGG              TTTTTTCTTAGATCT 100 414
         hli 1290737 .. 1290761 + -15.1  -4.65032   TCTTTCCTTCTTTCT          TGACCCCAGTT GTG AGCTGGGGTCA          TTTGTTTCTCCTTTC 100 86
        rpoD 1291788 .. 1291809 + -14.5  -4.43283   CCTACTACCTCTAAA           CGGCTCTTC GGTG GAAGAGCCG            TTTCTCTTTATATAC 100 60
    AM1_1307 1292428 .. 1292451 +  -3.2  -2.78405   CAGATTTAAGACTTG          GGTTCAC-CAA CCG TTGAGTAAACC          ACTTTTTTAACTAAG  43 9
        ftsH 1294392 .. 1294414 + -13.4  -5.29782   ACGAATTCCTTTGAA           TGACCCCTGC GTA GCAGGGGGCA           TTTTTTGTGCCTGTC 100 52
    AM1_1309 1296537 .. 1296547 +  -6.8  -3.46602   CAGTGCATGCTGTCA                 GCTG GAG CAGC                 TTCTAATGTGAACCA  61 509
    AM1_1311 1298728 .. 1298744 +  -6.5  -3.52234   AGGCTAGGGATCTGT              TCCGCTG CCT CAGCAGA              TTATGAGTTTGTTCA  61 103
    AM1_1312 1299017 .. 1299028 +  -5.8  -3.72576   CGAACCGATAAGGTG                GGCT TGGC AGCC                 TTTCATGGAGGAAAG  61 101
    AM1_1314 1301346 .. 1301364 +    -6  -3.04604   ATGGCGACTGCTATA             CCATCCTT TTG AAGGATCG             TCGTTTCTAGCTTGT  54 46
    AM1_1317 1303891 .. 1303932 +  -8.1   -2.6563   ATCCCATTGAGTAAT G-AGAGAAGCTAGAGGTCAT AGT ATGACCTCTAGCTAATCAAC TCACTTGTTGAAGAA  60 69
        ltrA 1306541 .. 1306555 +  -2.1  -2.68259   CTGCAGGGCAGTGCC              CGCGAG AAAA CT-GCG               TCGTGTGGTCATCTT  40 46
    AM1_1323 1307641 .. 1307655 +  -4.2  -4.38712   ATAGTGAGTTGGGTA               TCAACC CGA GGATGA               TTTTGTCGCACTAGG  65 378
    AM1_1324 NONE
    AM1_1325 NONE
    AM1_1326 NONE
    AM1_1327 1311802 .. 1311814 +  -3.3  -3.84406   CACTAATAAGTACAT                CCCCA GAA TGAGG                TTATTCTGATGACCC  53 46
    AM1_1328 1312182 .. 1312193 +  -5.8  -2.71693   CTATCGGATCTTCAT                GGAC CCCG GTCC                 TGCCTTTGCTTAATC  52 1
    AM1_1329 1312893 .. 1312904 +  -2.2  -2.63236   ATTGGGCAGCCAACC                GATG ATGG CGTC                 ATTAATATTAAGTTG  40 255
    AM1_1330 NONE
    AM1_1331 1314773 .. 1314785 +  -7.7  -2.56715   AAACATTTTGGCTAC                TCAGC GCT GCTGA                TAGATTCATGGAAAT  60 89
    AM1_1332 1316098 .. 1316109 +  -5.8  -2.78992   CTCCAACTTTCTGTT                CGAG TCCC CTCG                 CTTGTTCGCGTAGGT  53 432
    AM1_1335 1318358 .. 1318380 +  -2.6   -3.2511   AGTTGTTACCCCTGA           GAATCGTCAT GAA GTGCCGAATC           GTTTTGTACCTCAAC  46 101
    AM1_1336 1319916 .. 1319942 +  -5.9  -2.71712   AATACGGCCTAACTC        GACTGAAGCTGA GATA TC-GCTCCAGTC         ATTTGAAGAAAAGGG  52 125
    AM1_1338 1320788 .. 1320798 +  -6.8   -4.8622   GGGGCTGATATGGTT                 GTGC ACT GCAC                 TTTTTCCTTGGGGAG  82 292
    AM1_1339 1321237 .. 1321262 + -10.3   -5.8187   GGCTTAGTTCGGTTT         GGGTCGGGACC TTTG GGCCTCGGCCC          TTTTTTTATTGGCTG 100 34
    AM1_1343 1323460 .. 1323472 +  -3.4   -2.6193   AAGCGAACCTCCAAA                GCAT CAATA ATGC                TAGATTGCTTGGTTC  42 214
        pdhA NONE
    AM1_1353 1331496 .. 1331530 +  -5.7  -3.76492   CTTGTATTTCCGATA    TAGAGCGC-TGGCGAG TCTC CTCGTCAGGAGCACTA     TTTAATACCATTAGC  61 120
    AM1_1356 1333804 .. 1333816 +  -6.3  -3.28712   GGTTATAAACACCCT                TCGAT TGA ATCGA                TTATGGGCAGGCAGG  59 111
    AM1_1358 1335378 .. 1335412 +   -13  -4.32034   AAGGTTGGCCTAAAT     CTTCTCAAACACGCTC TTA GAGGCTGTTTGAGAAG     TTTTAGTACTCCTGC 100 28
    AM1_1360 1338389 .. 1338402 +  -2.3  -4.16284   ACGGCTTCTTTTCTA               GCGGT CTCA AGCGC                TTTCTTAGCCAATGT  57 441
    AM1_1363 NONE
    AM1_1364 1342658 .. 1342676 +  -2.4  -3.60098   TCGAAACTCATCTTG             CCATTTTG GTT CAGAATCG             TTTGCCCTGAAGCAT  47 220
    AM1_1367 1345273 .. 1345322 +  -7.7  -3.14931   TGAGTTCGCTATTGA GCATACCGACGTTGGACCAGCCA CCGT TGGCAGGTGAAAAGACGGGATGC TTGGTAAACAATGGG  62 302
        ndhK 1349024 .. 1349047 + -11.1  -2.80493   TGAATCTTTCATCCA          TGCTGATCC CAATGC GGATCAGCA           ATTCTATATTCAACG  77 70
        pheS 1350039 .. 1350056 +    -2  -4.14392   TTGTACACTAGCGAT             TTG-CGC TTCTT GCGTCAA             TTTTAGGCATTGCCC  55 2
         dus NONE
    AM1_1375 NONE
    AM1_1376 1353563 .. 1353577 +  -4.2  -2.59668   ACAACATGCCTGGAA               GTTGGC CAT GCTAGC               ATTATCCGAATATTC  45 77
    AM1_1377 1355758 .. 1355769 +  -4.4  -3.87538   TGAATGAGGCTATTT                TGTG ATGA CACA                 TTCTTCTACTCCTTT  57 371
    AM1_1378 1357923 .. 1357935 +  -3.3  -2.85668   CCATCTTATTTATGT                TGGGA CTC TCCCC                TCTAATCTGCCAATC  43 90
    AM1_1379 1359994 .. 1360012 +    -6    -4.011   CAGCTCGCCTTCAGT             CCCCTT AATGTCG AAGGGG             TTATTTCGATGTTCA  66 219
        moeA NONE
    AM1_1383 1363187 .. 1363205 +    -3  -4.19238   TAGCGAGTACCTGCT             TTGCGGTG ATG CACTGCCG             TTTTGACGTTAGAGC  58 76
        hemD 1369041 .. 1369051 +  -6.8  -2.60032   CTTCTGTGAGCAAGG                 CCAG TAC CTGG                 AGTTTTTGAGACACC  56 73
        aroG 1370609 .. 1370640 +  -5.8  -3.53444   TGGGTGATTTGGTCT      GGGGCTAGGTTGAGC TTC GCTAAGGCT-GCCCC      TTTGGAGGCCCCTGA  59 500
    AM1_1391 1371643 .. 1371660 +  -8.5  -4.98255   CTTAAAAGCCACCGT             TGCACTA CTGA TAGTGCA              TTTTTGTCCTTCGGA 100 147
    AM1_1392 1373444 .. 1373454 +  -4.6  -3.55444   TTTGACTTCGGAAAA                 TCCC CGA GGGG                 TTTCAAAGATCAGGC  55 511
        pilM NONE
        pilN NONE
        pilO NONE
    AM1_1398 1380113 .. 1380145 + -23.7  -4.05747   CTAAGAATCATAAAA      GTACCCCTCATCTTG AAG CAAGATGAGGGGTAC      TTTATATGGAATATA 100 47
    AM1_1403 1387213 .. 1387224 +  -7.2  -3.53012   GCAACCGAAGACACA                GGCC ATTT GGCC                 TTTAACAAAGGGACG  64 395
    AM1_1408 NONE
    AM1_1409 NONE
    AM1_1410 1394750 .. 1394778 +  -5.3  -3.04398   TTGCCTTAGGAGTCC        TACTGCTTAATCC CTA GGATTTATCGGTA        ATTTTGAAGGAAGCG  52 32
        selD 1405274 .. 1405294 +  -4.7  -3.16564   ATACCCTCCCTTTTT            TAGGGGTAA TAT TTGCGCCTA            TTACTGGCGTACCAC  51 405
    AM1_1425 1417478 .. 1417490 +  -2.6  -3.57971   TCTAAGTTCTCTAAA                CGGG CAACT TCCG                TTTGGCGATCGATCT  49 173
        psaL 1429108 .. 1429128 +  -7.5  -5.04175   TAGCTAGCTGAAAAA            CCCTCTGTG GCT TACGGGGGG            TTTTTCTATGGTTGG  89 99
    AM1_1441 NONE
    AM1_1442 1433545 .. 1433556 +  -3.6  -3.28712   CTAGGGTTTACCTTC                TGGC TAAA GCCG                 TTATGCAACGAGGGG  49 59
    AM1_1447 1439128 .. 1439139 +    -3  -2.85784   CCTAGGAGAGCTGTT                TTGA CCCC TCAA                 TGGTTGCTTAAGTTC  43 22
    AM1_1448 1439755 .. 1439766 +  -4.4  -2.71011   GTCAGAGGCTACTCA                CTGA TGAT TCAG                 TCATTCCGCGAGGAT  45 125
    AM1_1449 NONE
    AM1_1450 1442253 .. 1442268 +  -6.1  -2.50443   GCAGATTTTAGCAGC              TCCCC CGCGAA GGGGA               ATTAGTCCACTATGA  53 30
    AM1_1451 1442538 .. 1442565 +    -7  -2.61452   TAGCAAGGCCTAGGA        CTGGTTGGCTTG TTGA CAGGCCAAGTAG         GTTGCTTCGACTAAT  56 44
    AM1_1455 1447265 .. 1447289 +  -2.2   -2.8294   GGCATTCAGAGTCAT         CTT-GACTACA TAAA TGTAGGCCAAG          TCCTTATCCAAAATA  41 44
    AM1_1456 1448223 .. 1448269 +    -8  -2.60615   GAGTTGTAGGTCCCA ATGGCTGCAAGGTCAACTTC AACCTAG GGGGTCGACCTTGCAGCTGG ATCTTTGCCAACAAT  60 32
    AM1_1459 NONE
    AM1_1460 1450593 .. 1450622 +  -4.9  -3.15663   GTCAACCTTTCGTCC       GTGCAGGAGTGCT TGTG AGCCCTACTGAAC        TTGCTCAAGATCCGT  51 41
    AM1_1461 1452151 .. 1452161 +  -3.2  -4.52589   TCAGCTGCACCAGCA                 CCTG ACT TAGG                 TTTTGTGTGGGAACA  66 307
    AM1_1468 NONE
    AM1_1469 1458305 .. 1458315 +  -3.2  -2.64616   TAGGCGGATATCCAG                 GTGG ATA CTAC                 TGGTCTAGGTGCAAA  42 52
    AM1_1470 1459098 .. 1459114 +  -5.1  -3.61239   CATCCATTAACCCTA              CATGGGC TAC GTTCATG              TTCTATCTCCCTCTC  59 117
    AM1_1471 1459837 .. 1459853 +  -5.1  -3.64103   AGCTGATTGGGTAGA              TCGATGG TAG CAATCGA              TTTAGAATATGGCTC  59 122
    AM1_1472 1460406 .. 1460422 +  -2.9  -3.62864   ATGGGGGAACCAAGT              CTTCAGC TCG GCTTAGG              TTTGAAGTAGGTTTG  50 56
    AM1_1473 1461266 .. 1461280 +  -4.2  -3.05596   CCACTGCGGGTACAC               CAATGC CAG GCATGG               TTGAATCCCCCACTC  47 136
    AM1_1476 1466870 .. 1466881 +    -3  -2.88758   CTGGGCGAATCCGAT                TGAA GTTT TTCA                 TATCTCAAGCATTCT  43 23
    AM1_1477 1468103 .. 1468138 +  -2.5  -3.87104   ACGGTATAGCTTCAA    GAGCGTGTCGGTGTT ATCTCA ATCAGTGACAAGCTC     TTCTTCTAGTCTGGC  52 32
    AM1_1485 1474013 .. 1474038 + -12.7  -3.39058   AACGATAGAATGCTG         GAGGTAGATAC TATG GTGTCTACCTC          TGTTCTATCTGCTGT  95 92
    AM1_1486 1474626 .. 1474656 + -15.6   -5.4505   TTAACCCTTAAAAAA       CAACCTGAGTTCAA CTT TAGAACTCAGGTTG       TTTTTTATTGCAGAA 100 52
    AM1_1488 1475977 .. 1475993 +  -2.9   -4.4648   ATCAATACTGATATC              CATCAGT TTA GCGGATG              TTTTGTAGTCAGGGT  61 434
    AM1_1491 1478623 .. 1478638 +  -3.2  -3.11316   TCACACGATTAGAGT              TGACGG ATTG CCGTAA               TGTGTTGAATGATAG  46 69
    AM1_1493 NONE
    AM1_1494 1480460 .. 1480488 +  -6.7  -4.56775   GAATATTTTGGATAC        TGGGCTCCCCA ATCGTTG TGGGTAGCTCA        TTTTTCAGAGAGAGT  77 376
        glnA 1483674 .. 1483701 + -17.2  -3.28924   CAAAGCGATTTACAA        CAAAAGCTGCCT GTAC AGGCAGCTTTTG         TTGTAAAAAGCGATC 100 63
    AM1_1498 1485044 .. 1485057 +  -5.2  -4.24413   TGATTAGATTATTTT               GGGG CTTTAC CCCC                TTGTTTCTTAATAGC  68 34
    AM1_1499 NONE
    AM1_1500 NONE
    AM1_1501 1490948 .. 1490963 +  -2.5  -4.54727   ATATATTGAGACTAG              GTCAC ACCAAA GTGGC               TTTTCGTTTCACCAC  61 91
    AM1_1502 NONE
    AM1_1503 1492399 .. 1492423 +  -4.9  -2.75963   GAATCACCCATAAGG          GATGATTGGCC TGG GGCTGATCGAC          ATTTAGACTGCGAAT  47 344
         fba 1495122 .. 1495157 + -17.9  -2.71681   CCTAAATCAGTAGTG    CAAATTTAGGTGGTG CGATCA CACCACCTAAATTTG     TCGTTAACGGCATTC 100 36
    AM1_1511 NONE
    AM1_1512 1500741 .. 1500751 +  -3.2  -4.07687   GCATCTTCTAAGAGA                 GGAG CGG CTTC                 TTTTAGCAAGGGGCT  58 215
        hisA 1502519 .. 1502554 +  -6.9  -3.27109   TTAAGAAGAGGATGG    GAGTGCTGCAGTACCT CGGCA AGG-GCTTCAGCGCTC    TGTTGGTTCCCTTGC  59 119
    AM1_1528 1513441 .. 1513462 + -14.5  -3.65314   ATAGTCAAAAATAAA           GGGTGAAGG CTAA CCTTCACCC            TTATTAAAAATTAGG 100 458
    AM1_1536 1519856 .. 1519888 +  -7.1  -3.75766   ATAGGTCTCTAGCAA      GTCTTGATTCTCAGG GCT TTTGAGAGTGAAGAC      TTCTTGGGTTGTCAA  67 424
        thrS NONE
    AM1_1541 NONE
    AM1_1542 NONE
    AM1_1543 1525791 .. 1525801 +  -5.4  -2.60075   ATTCAGTCCCAGGGC                 TGGA CGA TCCA                 CTTCCTTGAACGCGA  49 6
    AM1_1544 1526033 .. 1526050 +  -3.5  -4.17048   ATAGGTATTGAAAAC             TAGGAAT AATT ATTTCTA              TTCTTTTCAACAAAG  60 98
    AM1_1545 NONE
    AM1_1546 1528574 .. 1528584 +  -3.2  -3.61654   AAATACAGTTGAAGC                 CTCG TAG TGAG                 TTTGACATCACTGTG  51 69
    AM1_1547 1529448 .. 1529474 +  -4.5  -3.41878   TGTCTGGCGAATGGA        GGA-GCTCTTAA CGGT TTATGAGCGTCC         TTATGACTTGAGGAA  55 15
    AM1_1549 1530538 .. 1530548 +  -4.6  -4.18018   GCACTATAAGAAACA                 CCCT ACA GGGG                 TTTTACATACCGAAG  63 113
    AM1_1552 1532508 .. 1532520 +  -3.4  -3.70149   GGCCCGTAAATCCTG                GGTT AGGGG AACC                TTTGCCTGGTCTCCA  53 137
    AM1_1555 1534454 .. 1534473 +  -6.6  -2.76117   TGACAATGAATAATA            TTTTTGAT TTAA ATCAAAAA             ATTACTTATTCTATT  57 186
    AM1_1556 1535543 .. 1535561 +  -3.8  -4.26076   TCCAGTATCGTCACA             TGGTGATC TGC GATCGCAA             TTTTCCTCAGCATGG  63 78
        ccb2 1541412 .. 1541431 +  -3.5  -3.33969   GTATTGGATCCTTAT            CGCCG TCATGATCAT CGGCG             TTATCGGCTCCGTTG  49 87
    AM1_1561 1542080 .. 1542127 +   -18  -3.62275   ACCCGCGGTCTTATT AGGTCTCAGAATTTCGAGGTCT AACG AGATCTTGGAATTCTGAGACCA TTTCAGCTCATGACT 100 204
    AM1_1563 1548432 .. 1548442 +  -5.4  -3.05046   CCATTTGTTTTCAAC                 CTAG ATC CTAG                 CTTTTCGACAGATCC  52 201
    AM1_1565 NONE
    AM1_1566 1551188 .. 1551201 +  -6.7  -3.08314   TGCCAAATAGAAGAA               GTGAC GAAT GTCAC                CTTTATCTATGACTT  59 49
    AM1_1567 1551962 .. 1551972 +    -4   -3.3782   TGACTACCGACTCCT                 TTTC TAC GAAA                 TTCCTTCACTACATA  50 318
    AM1_1572 NONE
    AM1_1573 1556562 .. 1556588 +  -2.9   -4.8543   GATGACCGTCTCAAT         TCCGAGAATCA TCTGC TGAGTCCCGGG         TTTTTATCCAGATTA  67 261
    AM1_1574 NONE
    AM1_1575 1558185 .. 1558201 +  -3.7  -3.03159   GATTCATATCCTTGA              GCAAG CTGAGCA CTTGC              TCTTCCCCCAGTTGA  45 216
    AM1_1579 1562360 .. 1562372 +  -4.1  -3.45366   TAGTCAACACTTAAG                GATGG AAC TCATC                TTAGTTACTTGCCCA  52 145
    AM1_1580 1563821 .. 1563833 +  -4.1  -4.52857   AAATAACCCTTTGGG                TCGCT AAG AGTGA                TTTTATCTCCCGGCT  68 90
    AM1_1583 1566045 .. 1566064 +  -3.6   -4.3534   TTTTGATAGAGATCC            GCAG-CTTT TTG GAAGTCTGC            TTTTGCTCCTTCAAC  63 273
    AM1_1586 1569687 .. 1569705 +  -6.8  -3.62384   CTAACCCACTTTTGC             TTAACAGA TAT TCTGTTAG             TTCTCTATCCCTTCT  65 37
    AM1_1590 NONE
    AM1_1591 1572221 .. 1572238 +  -2.6  -4.21954   TGAAGACGCTTGCCA             CGGCTG AAGTCC CAACCG              TTATTTGTATATTGG  57 111
    AM1_1593 1573118 .. 1573136 + -11.7  -5.30686   TAAACTCTTCTTAAA             CCCAGCC AAAAA GGCTGGG             TTTTTTATAGATGTT 100 152
         hli NONE
    AM1_1595 NONE
    AM1_1596 1574203 .. 1574226 + -15.4  -5.80951   CCTTCTATCTTTCCA          GCTGCTCTTC TATG GAAGAGCAGC           TTTTTTGTTTTACAT 100 406
    AM1_1597 NONE
    AM1_1598 NONE
        ftsH 1576881 .. 1576901 + -14.7    -5.252   ATAATTCCTTTAGTT            GCCCTCTGC TTT GCAGGGGGC            TTTTTTGTACACCTG 100 53
    AM1_1600 1577499 .. 1577510 +  -4.4  -4.07568   AACGCTCTTGCGATC                GCAA CCCG TTGC                 TTTTGCCCCCCAGAC  60 358
    AM1_1604 NONE
    AM1_1605 NONE
    AM1_1606 1581786 .. 1581799 +  -8.1  -3.45832   TCCGGAACTGTACTT               CCAGG TTTT CCTGG                TTGGTTGTGGCCTTC  66 205
    AM1_1610 1583389 .. 1583402 +  -2.3    -4.946   CCGACTGAGGAAGCA               CGATC TGTC GCTCG                TTTTTCATCTTTCGT  70 248
    AM1_1611 NONE
    AM1_1612 1585400 .. 1585426 +  -4.5  -3.41878   TGTCTGGCGAATGGA        GGA-GCTCTTAA CGGT TTATGAGCGTCC         TTATGACTTGAGGAA  55 15
    AM1_1614 NONE
    AM1_1615 NONE
    AM1_1616 1587972 .. 1588008 +  -8.2   -3.3514   AGCATTTTACGCAGA   GC-TTCCCCA-TCGTTGA CCA TAAACGAGTGGGGAACGC   TTATAGCCTGTCCGT  66 360
    AM1_1618 NONE
    AM1_1619 NONE
    AM1_1621 NONE
    AM1_1622 NONE
    AM1_1623 1593749 .. 1593763 +  -2.1  -4.72007   TTCTTCAACTGACTT               GTAGG GGGTA TCTAC               TTTATTTTGCTCGGC  67 175
    AM1_1628 NONE
    AM1_1629 1598143 .. 1598154 +  -2.2  -3.72073   AATACCGTAATAGCC                CTCT TCTC GGAG                 TTGCTTTTCATCCAT  50 433
    AM1_1633 1602395 .. 1602429 +  -6.6  -3.85698   ATGAAGCGATAGGTG    TCAGCATACGCAC AATTGAGCGG GTGCGTATGC-GA     TTTGTGGAAGAAGGC  67 330
        trpF 1605638 .. 1605653 +  -2.6  -2.84298   ACTCATGAAATAACT              GAGTAA CCCT TTATTC               TGCTTCTAACATCTG  42 71
    AM1_1639 1607152 .. 1607171 +  -9.2  -4.13767   ACTAGGTACATTCCC            CGTAGCGG CAAT CCGCTCCG             TTTTCAGATCCCGCC  78 422
        ppsA NONE
    AM1_1646 1615420 .. 1615436 +  -3.7  -3.94634   ATTTCCTTCTCCAAA              TCCCTAA TGT TTAGAGA              TTCTTTGACCTGGTA  55 385
        ndhN 1621027 .. 1621037 +  -4.6  -3.08133   CCCCTCTCCGATATT                 GTCG CTG CGGC                 TTAGATACCTGAATA  51 11
    AM1_1652 1622252 .. 1622268 +  -8.7  -2.59958   GCTCATCTCGGATCT              GCTAGCT CAC GGCTAGC              CCTTTGTTATTTCAT  66 21
    AM1_1653 1624093 .. 1624104 +  -2.2  -3.16742   ACTTCGGGTAAGATT                CTCT GGCA AGGG                 TTACTCGGGATTGGC  43 88
    AM1_1655 1624861 .. 1624884 +  -2.3  -4.62471   CTCTCAAAATCGATC          GTCCCCCGA TGCAGC TCGACGGAC           TTTTTAACAATTGCG  63 113
    AM1_1656 1632301 .. 1632313 +  -3.4  -3.69216   ATATTCCATAATCCA                CAGA TAACT TCTG                TATTTTCAGTGCAGA  51 454
    AM1_1657 1635546 .. 1635573 +   -15  -5.71983   CTTTGGAATAATGAC        CTCTCCTCCATA TGTC TGTGGAGGAGAG         TTTTTTTGTAGTTGA 100 56
    AM1_1663 1644699 .. 1644718 +  -2.9  -3.74658   AAATCTAAGAATGAA            GTCTCCTT GCCGA AAGG-GAC            TTTCAATAATTCTTT  51 492
    AM1_1668 1646759 .. 1646771 +  -4.7  -3.71848   GCACAGGGAACAGCT                CCTCC ATG GGCGG                TTGTTGCTGGGGAAA  57 363
    AM1_1669 1648660 .. 1648673 +  -2.4  -4.09864   AAACTAAACTAAACA               CCTT CAGGCA AAGG                TTTTGGGGCATGAAT  55 411
    AM1_1670 1650844 .. 1650891 + -20.2  -4.89729   GATCTTCTAATGCCT TCACAGCTTCAGGATTTATTTC GGCC GAAATAAATCCTGAAGCAGGGA TTTTTAAATTTTCTG 100 132
    AM1_1677 1654741 .. 1654753 +  -3.3  -4.18018   GGCCATTGCTCCATC                GCTGT GAA ACTGC                TTTTAGATGAAAACC  58 40
    AM1_1678 NONE
    AM1_1679 NONE
    AM1_1680 1656354 .. 1656370 +  -7.3  -2.53995   CTTTTGCAGCTTAAG              CGTCCTT AAA AAGGATG              TAGCTTCAGATGCAT  58 89
    AM1_1681 NONE
    AM1_1682 1658006 .. 1658028 +    -4  -3.01712   TCACATCTAATGCCG           TCCTTAGCAG CGT CGGCAAGGGA           TCTTCCCCGACAAAC  47 383
    AM1_1684 1659578 .. 1659588 +  -5.4  -2.71364   GAATCGCCTTGAACT                 TCTG CAG CAGA                 TGATTCGCCCAATAA  48 126
    AM1_1687 NONE
        glpK 1665557 .. 1665592 +   -15  -2.57244   AATATAAACTCAGTT    AATAATAGGGTTTCTC AGGA GAGAAACCCTATTATC     TACATTAGTGAATCA 100 238
    AM1_1689 NONE
    AM1_1690 1670179 .. 1670203 +  -5.1   -3.1247   ACAACGTTATTCGTC          TTAAATTCTTG CCC CAAGGATTGAA          TTAGGTGTAAAAAGT  52 284
    AM1_1694 1675055 .. 1675076 +  -4.5  -3.07291   CTAGGGCTGAGAACA           TCCCT-GTAC GAC GTATTAGGGA           TTCAGTGGAGTCATT  51 92
    AM1_1695 NONE
    AM1_1696 NONE
    AM1_1697 NONE
        lipA NONE
    AM1_1699 1679763 .. 1679788 +  -3.4   -3.3095   AATCCCACCCCTATT         GCATCATTAA ACGATA TTAATCATGC          TTGTGAAAAATCTCT  47 122
    AM1_1700 NONE
    AM1_1701 1681828 .. 1681838 +  -5.4  -3.75817   TAGAAACAATAGAGA                 GAAC ATA GTTC                 TGTTTATTATCGCCA  61 154
    AM1_1702 1683940 .. 1683950 +  -2.4  -4.66537   TGAATCAAGGACGCG                 CTGC TTA GCCG                 TTTTATGTTGGAACA  67 509
        cobS 1687077 .. 1687094 +  -6.9   -2.7169   AATTTAAGGTTCAAT             CCTGTCG GTCT CGCCAGG              CTCTTTGTAAAGATT  56 244
         rne 1689399 .. 1689409 +  -5.4  -3.04144   AGTCTTATAAATACT                 GCTT GAA AAGC                 TGTTGAACCTGAAGC  52 53
    AM1_1707 NONE
    AM1_1709 NONE
    AM1_1710 1694460 .. 1694475 +  -6.2  -2.55999   GGATGTCGAGGCTTA              TCTGAT TCTC ATCAGA               GTTGGTCTGAGCTGA  53 101
    AM1_1711 1695334 .. 1695345 +  -3.6  -4.08767   ATCGCAATAGGCTAG                CCCG CGCC TGGG                 TTTTCAGGCGATCCA  58 243
         rnc 1702505 .. 1702528 +  -4.6    -3.052   TTCAACAGTCCCTTT          TCCATCATTC GATA GGATAATGGA           TATATATCTACGGCT  50 43
        ccsA NONE
        tilS 1706582 .. 1706603 +  -8.8    -4.614   GGTTAGAAAAGTGAG           GTGACACT CCAAAA AGTGTCAC            TTTTATGTCATTAAG 100 395
    AM1_1723 1708231 .. 1708241 +  -6.8  -3.53012   TCTTGGAAGGCGCGA                 GCAG CCA CTGC                 TTTCCACCAAAGCAA  61 474
    AM1_1724 1710182 .. 1710193 +  -4.4  -4.19123   CCATCACCTCATTTT                CCAT AATC ATGG                 TTTCTGTAATTTCTA  62 525
    AM1_1729 NONE
    AM1_1730 NONE
        speE NONE
    AM1_1732 NONE
        bioB 1720233 .. 1720259 + -13.9  -4.16842   ATTAATCAACAGAAA         TGCCTTGAAGA CTTTT TCTTCAAGGCA         TTTATTAAGGATCGA 100 50
        trpS 1723022 .. 1723047 +  -6.1  -3.16564   CTAGGCGCCTCTAAG         GGCAGCGTG AAATGAAA TGCGCTGCC          TTGATCGCGTCCGGC  55 83
    AM1_1738 1726693 .. 1726706 +  -2.4  -4.86001   GACTCAGGTCGAAAG               GCAT CCTTCA ATGC                TTTTTCTAGGCTGGT  70 104
    AM1_1744 NONE
        cytM NONE
    AM1_1748 NONE
    AM1_1749 1739166 .. 1739185 +  -2.1  -2.95884   TCGATGAAATTCACC            TTCGGGA ACCATA TCCCAAA             TCTCTCCATTAATCA  42 485
    AM1_1754 1743721 .. 1743731 +  -3.2  -3.34192   ACAATTGTTTTGATC                 CCAG CTT TTGG                 TTAGTTCCAAGCATT  47 236
    AM1_1755 1744009 .. 1744022 +  -2.3  -3.62746   GTTCAATTCGGTAAC               GTTGC TTAG GCATC                ATTTTTTACCCTAAC  49 17
    AM1_1756 1744402 .. 1744415 +  -3.1  -2.83908   TGCCATTAACTTTCA               GTATG GCAA CGTAC                TATAGTCATCCATTT  43 7
    AM1_1757 1744904 .. 1744933 + -10.2   -3.0264   GCTTTCCCTTAAGTG       GCTAAAACATTG AGATTC CAGTGTTTTAGC        TATTCAGAGAGCTTT  76 106
    AM1_1758 NONE
    AM1_1759 NONE
    AM1_1760 1748925 .. 1748947 +    -4  -2.53911   TTGTTTTAGCGGGGT           CGCGCTGAAG CTG CATCATTGCG           TAAATTGGCCCTTCC  45 32
    AM1_1761 1750411 .. 1750422 +  -5.8  -4.08349   CCATATCGAATCGTA                GCCT CTTG AGGC                 TTCTATTTTTGGCAT  68 96
    AM1_1762 1751999 .. 1752019 +  -2.6  -3.18023   GTACACACTAAAAAA            GCAAAGAT TCATC ATCTTTTC            TGTTGATGGTAATCA  44 160
    AM1_1763 1752570 .. 1752586 + -10.1  -3.25823   ATTCTCTTCAATTTA              GGGCTGG GGC TCAGCCC              TTGCTGTAACCCCCG  76 40
    AM1_1764 NONE
    AM1_1765 NONE
    AM1_1766 1756158 .. 1756168 +  -3.2  -2.78706   AAACCACCCCAGTAA                 GCTG CCT TAGC                 ATTTGCACTGTACTT  43 26
    AM1_1767 NONE
    AM1_1768 1759925 .. 1759950 +  -3.9  -4.44461   ATGATCAGTTACCAA         GCCCTGAGAGA TCTT TCTTAAAGGGC          TTTTATACACTTATT  65 57
    AM1_1773 1765699 .. 1765713 +  -4.9  -3.18776   TATGCACACGCTGCT               GGTCC TAATT GGGCC               TATTGGTCGCTTTGG  51 428
    AM1_1779 1770846 .. 1770860 +  -5.6  -4.28994   CGGAGGCTTGGAAGA               ACCCCT TAA AGGGGA               TTTTAATCGCTGGTC  70 445
    AM1_1786 1778149 .. 1778161 +  -7.7  -3.12351   CCACAAACTTCTGCA                GCCTA AAA TAGGC                TTCGATATAGACAGG  62 141
    AM1_1790 NONE
    AM1_1791 1782528 .. 1782571 + -23.4  -4.11484   AAAACCTTATAAAAA GCACAAATGCGCCCGATTTA TCTA TAGTTCGGGCGCATTTGTGC TTTTGGGCAATTAAA 100 43
    AM1_1801 1792855 .. 1792871 +  -4.3  -4.17698   GTCCGAGGAAACGTC              CCAGCTC CTG GGGATGG              TTTGTATATCTCACT  62 437
    AM1_1804 NONE
    AM1_1805 1794367 .. 1794377 +  -3.2  -2.56095   AGAATCAACAACACT                 CAGT TAA GCTG                 TAGATTAGCTCTCCC  42 19
        obgE 1795558 .. 1795573 +  -4.8  -3.54459   TTCAGCAGAAGGAAG              TTGAAT TATC ATTCAA               TTTGGGAAAGATTAA  55 43
    AM1_1808 1796542 .. 1796567 +  -4.5  -3.53012   GAGACTTTAATTCGG         CACGCAGCTGC TTAA GCTGCTCCGGG          TTTAAGGAAGACCGA  55 231
    AM1_1813 1801474 .. 1801491 +  -8.5  -5.80364   TCAACCAACTAAAAG             GAGTGTT TCTT AACACTC              TTTTTTTGTTGAGCT 100 84
    AM1_1822 1809398 .. 1809414 +  -2.2  -2.92777   GTAGGCATTTCTGCC              GGATAG GATAA CTAGCC              CTTTAGTGTGTGGGG  42 146
    AM1_1823 1809854 .. 1809882 +    -3  -2.97613   GATCAGATAACTCTT        GCCGCAGGCGAT AAAGC ACCATCTGTGGC        TGTAATTGCTTGATA  43 54
    AM1_1827 1813059 .. 1813070 +    -3  -4.22949   TAAGAATGTGATAGA                CAAA CATT TTTG                 ATTTTTTTTTCACAA  58 306
    AM1_1828 1814953 .. 1814989 + -13.1  -3.18912   ATAATGTTGTCATGA    GAAAGAGGCTGCCATTT GAA GAACAGCAGCCTCTTTC    TTGATGGATGAATGA  95 55
    AM1_1830 1816695 .. 1816708 +  -3.9  -3.84406   TTTACTTGAAGTATA               TTAAG ATTT CTTAA                TTGTTGTGGTAGAGA  56 323
    AM1_1833 NONE
    AM1_1834 NONE
    AM1_1835 1825087 .. 1825103 +  -2.3  -4.57787   TTTGCTAGAAGTCAC              TTCATAA AGT TTAGGAA              TTTCTTTACTGTTGT  63 120
    AM1_1838 1826868 .. 1826880 +  -6.2  -2.58579   ATTGACGAGCCGTGC                GGCC AGATC GGCC                ATTATGGCGGGTTGC  51 64
    AM1_1840 1830151 .. 1830168 +  -4.1  -3.90464   CAGGTATCTCCCGCC             TGATGCC CATA GGTATCG              TTATATTGTTTGAAA  57 379
    AM1_1844 1833832 .. 1833843 +  -5.8  -2.89068   CTTAGTCATGAATGG                TGCC ATCT GGCA                 TGGTTGTCCCTTTTA  53 36
    AM1_1846 1835086 .. 1835104 +  -3.8  -3.16191   CTAGGGCATCCATTA             GGCGAATC AGC GATTTGGC             TTGATCGGGATCTGC  48 123
    AM1_1848 NONE
    AM1_1849 NONE
    AM1_1850 1838636 .. 1838652 +  -2.1  -4.16842   GGCGCTGGGCAAGTT              CCTGGGT TAA ACGCTGG              TTTGTTGCCCGTAAC  57 95
    AM1_1855 1843493 .. 1843503 +  -6.8   -3.1085   AGCCTACGATTGTCC                 GCAG CAA CTGC                 TCTTCCCTCGATTCC  59 505
    AM1_1857 NONE
    AM1_1858 1844943 .. 1844972 +    -3  -3.23395   GAGAGGCTATTACTG      TGGC-TC-TCAAGA TTGA TCTTGATGATGCCG       TTCCTAGTCATCGGT  46 111
    AM1_1859 NONE
    AM1_1860 NONE
    AM1_1861 1846577 .. 1846587 +  -3.2  -4.07568   GCCAACATTTCATCA                 GAGG GCT CTTC                 TTTTAAAAAAACAGG  58 458
    AM1_1864 NONE
        ilvB NONE
    AM1_1866 1851888 .. 1851900 +  -6.3  -3.53343   CCTGCTAATATTCAA                GTCTT TGT AAGAC                TTTGACAGGGCAATT  61 133
        gauB 1853252 .. 1853275 + -12.4  -2.62038   TCCTCACACCACACT          CCGCCTGAGC ATTT GTTCGGGCGG           CTTCCTCATTTTAGG  88 154
         trx 1853799 .. 1853828 +  -9.3  -5.37345   ATTTAAGTTATAGAA       GCGGTCCTTCG CCAATAAA CTAAGGACCGC        TTTTTTGTCGTTAAA 100 102
    AM1_1869 1855015 .. 1855026 +    -3  -3.08912   GATCACGATTGGGCA                TCAA TATT TTGA                 TCTATGTCTGTGATA  46 63
    AM1_1870 1859838 .. 1859849 +  -7.2  -3.28122   TCCAGCTAAATCGCT                GCGG TTTA CCGC                 TGTCTTTGCATCGTC  64 32
    AM1_1872 NONE
    AM1_1878 1872427 .. 1872442 +  -4.7  -5.12617   TTATACATCTTTAAA              CTGCT GGAATA AGCAG               TTTTTTCACTCATTG  80 14
    AM1_1879 1873806 .. 1873816 +  -5.4  -3.76125   ATTGGAGCAAGATTT                 GTAG CCT CTAC                 TTTGGGTTCGCCTAA  61 307
    AM1_1880 NONE
    AM1_1881 1876297 .. 1876308 +  -4.4  -4.38092   TCAAACTTGCGTCAA                GTCA TCGA TGAC                 TTATTTTAGTTGTTG  63 76
        pyrB 1878088 .. 1878107 +  -7.1  -2.77043   TTTTCCAACCTCAGG            TTCCGCC AGTCAA GGCGGGA             ATTTGCAATACTGGA  59 310
    AM1_1885 NONE
    AM1_1886 NONE
    AM1_1890 NONE
    AM1_1891 1889099 .. 1889118 +  -4.8  -2.62983   GCAGCACCATACGTT            CGCAGCCC ATCT GGGCCGCC             TGCTGTAAAAATCGC  46 468
    AM1_1923 1921301 .. 1921354 + -14.3   -2.5805   ACTCATTCCACACAC TCTTCTACTGCTATGCATTGCAAA GATCAAG TTTGCAATGCATAGCAGCA-AGGA CTTGTGAGCAATCCT  95 192
        trmB 1925502 .. 1925523 +  -2.9  -3.27215   AGATTCAACCCGCGA           TCGCACG CCCAATAC CGAGCGA            TTAATCTGGCAATTT  47 318
    AM1_1932 1929013 .. 1929040 +  -4.8  -4.08557   ATCGACGCTTGCCAC        GGTGTTGAGTAT CAAT GTCCTCAACCCC         TTGTTCTTTCAGCAG  62 274
        glyA 1933393 .. 1933405 +  -6.3  -2.60901   ATTCCTCATGCATGA                TGTCA TTG TGACA                GTTCATTAAGACTGT  54 85
    AM1_1939 1934648 .. 1934667 +  -9.4   -3.1355   TTGGTAATCGGCCAA            TCTAAAGC CGTG GCTTTAGA             TTGGGTATCAGTAAA  67 153
        cinA 1936126 .. 1936138 +  -3.4   -3.4616   TCAGTAAATATGCTA                CGTT AAAGA AACG                TTATAACATTTTTTG  49 101
    AM1_1942 1936371 .. 1936389 +  -8.2  -4.07912   CTAGCCTTATTTCAC             TGCTGATT ACT GATCAGCA             TATTTTTGATTCGTT  79 37
        aroQ 1936953 .. 1936963 +  -3.2  -2.60392   ACCCAGACTTAATCC                 TGCT CTA GGCA                 ATTCGTTACGAAGTC  42 29
    AM1_1944 1938774 .. 1938790 +  -5.1  -2.80545   AAGTTTAGGAGTGGC              CTGCGGT AAG ATTGCAG              CTGTTTTAGGCTATC  50 33
    AM1_1945 NONE
        rimI 1941518 .. 1941532 +  -2.7  -3.28712   CTAAAATTGGGTTTA               CCAGC AAGCA GCAGG               TTGTGGGAAAACGCC  46 224
        clpC 1944044 .. 1944065 + -10.9  -4.35885   GCTAATGCTGGAAAA           GGGAAATCC GAAA GGGTTTCCC            TTTCTTGTAGTCGAT 100 53
    AM1_1948 NONE
    AM1_1949 NONE
        rlpA 1946153 .. 1946185 + -20.1  -2.62616   AAATTTTGATATTTC      CAGAAGCCTCCTAAT CGA GTTAGGAGGCTTCTG      TGATCTCCGCCCTAA 100 97
    AM1_1954 1949142 .. 1949164 +  -5.4  -3.01712   TATCTGAAGCAGGAC           GATAGCGCCC CAA GGGCACAGTC           TGTTGAGGGACGGGA  51 336
    AM1_1955 NONE
    AM1_1956 1952017 .. 1952027 +  -2.6  -3.92314   AGGATAGAAAAGGTT                 TATT CGT AATA                 CTTTTTTTAATGATG  54 100
    AM1_1957 NONE
        thiS 1953458 .. 1953468 +  -5.4  -2.94561   TCTCAAGTCACGATT                 CTGA AGT TCAG                 TCATTGTCTTGGAGT  52 57
        hemH 1955120 .. 1955135 +  -3.3  -3.73043   CGGGGGACTACCCCA              TAGTC AATCAG GACTA               GTTTTTTACCTTTCT  53 373
         ccp NONE
    AM1_1963 1961357 .. 1961402 + -12.1  -5.14563   AAATTCAACACCGCC TAATCCCAGCAACCAGAGCGAT TGG AT-GCTCTGGTTGCTGTTGTTA TTTTTTGCTCGCAAC 100 54
    AM1_1964 NONE
    AM1_1965 1962748 .. 1962766 +  -2.5  -3.66654   ATGAATCACTCAAGA            CTTA-TGC AGCG GCAGTAAG             TTTCAACTTGAACTG  50 78
    AM1_1966 NONE
        folK 1966829 .. 1966849 +    -4  -2.73364   TATACAGGGGTTCAT           CGACTGTCT CACT AGGCAG-CG            TCATTCAGCTGAGAA  45 11
    AM1_1971 NONE
    AM1_1972 1967942 .. 1967956 +  -2.8  -4.95806   AGATTCACTTTAAAT               TCAGCT ATT AGGTGA               TTTTTCTGCTGATTT  70 111
    AM1_1973 NONE
    AM1_1974 NONE
    AM1_1975 NONE
    AM1_1976 NONE
    AM1_1978 1972910 .. 1972922 +  -5.5  -3.16881   TATCAAGCCTGCTTA                GGCTA GGG TGGCC                TTGCTGAGATAACTG  53 20
        ribC 1978467 .. 1978479 +  -4.8  -2.83715   TTCCTGACCACCCAC                GGCT TCGGT AGCC                TGTAATGGTAATGGG  49 8
    AM1_1984 NONE
    AM1_1986 NONE
    AM1_1993 1987231 .. 1987243 +  -7.7  -3.99805   ATCCATCTCCATGTA                CGACA GAC TGTCG                TTTGACTTTTTCAGA  74 65
    AM1_1994 1988039 .. 1988096 +  -4.1  -3.45742   GCCTGATCGGAGCAG CCATTGGTGCCC-TTAGTTCTGTCCTGG TTG CGGGGGGAGAGCTGGCGGGCATCGATAG TGTTCTTCGTCGTAG  52 216
    AM1_1997 1990032 .. 1990045 +  -2.3   -4.3739   TCTCAGCAGGTAAAG               CACAG AATC CAGTG                TTTTCTAGAACGATA  61 438
    AM1_2000 1991499 .. 1991510 +  -7.2  -3.20633   CGCTTTTTGTTCTTC                GCCC TCAT GGGC                 TTCCATATCTTCTAG  60 354
    AM1_2002 1992623 .. 1992661 +  -6.1  -3.25538   TTCGTAATCCTCATT  TAATGTCACCACTACCCC GGTC GGGGTAG-GTTAACGTTA   TAATTTTATTAAGAA  59 34
    AM1_2003 NONE
    AM1_2004 1995098 .. 1995117 +    -5  -2.85351   AAGAAATATTTCAGC            TTGGGG CTTTTCGA CCCCAA             TATCCTGTGAAAAAA  47 362
    AM1_2010 1998198 .. 1998209 +  -3.6  -4.07535   TTGCCAAATACGATT                GTGG TAAT CCGC                 TTCTTTATCCACATT  58 46
    AM1_2013 2002168 .. 2002209 + -11.8  -2.88427   CACTCCTCTGACATA TCAGCATCATCGGTAC AAGGTTGAAC GTACGGATGATGCTGA  TATGTCAGAGGTATT  83 44
    AM1_2016 NONE
        murQ 2006658 .. 2006672 +  -3.4   -3.0395   TGATCGGCTTTGCGA               GCACCT GTC GGGAGC               TGTTCAGGCGTATAT  45 304
    AM1_2019 2009436 .. 2009490 + -21.7  -3.02471   GTAAATTTAGTCATC CCAACATCTACAAAAGCCCCGCTGA GTTAA TCAGCGGGGCTTTTGTAGATGTCAA TATCTATGCTAAAAC 100 44
    AM1_2021 2012660 .. 2012696 + -16.1  -3.05046   ATCATCACATACTGT    CCAACAACAGCACATGA GTT TTATGTGCTGTTGTTGC    GTTTTGCCCCAATGA 100 70
        glgA 2014360 .. 2014371 +    -3  -3.49209   ATTACTAACAAAAAG                CATT GCTG AATG                 TTATCGATTTGCTGT  49 223
    AM1_2023 2014869 .. 2014904 +  -9.2  -4.58685   ATTTTTCTCTAAAAA    GAAACCGCTTCATCTGT TGG ATA-ACGAAGCGGTTTC    TTTTTAGAGAAATTT 100 172
        psbB 2018165 .. 2018184 +   -10  -5.09225   GTTCAATGATAAAAA            CCGCTTTC TTGT GAAGGCGG             TTTTTTGCATCAACT 100 343
    AM1_2029 2020200 .. 2020225 +  -4.1  -3.55563   CTGAACTCGCAATCC         CTTGA-GGCT AGTCCTC AGCCATCAAG         TTTCACGAATCAAAT  52 37
        ubiD 2025702 .. 2025720 +  -4.5  -5.10497   TCGACACGAAGAACA             GTGGGTC TGGAC GACACAC             TTTTTTGACTGCGTT  80 348
    AM1_2038 2028926 .. 2028941 +  -3.2  -3.82499   GCTGTGGGTTTGTTT              TCCACC GTCG GGTTGA               TTTCATAAATTTGAT  55 366
        nuoN 2038647 .. 2038670 + -18.2   -4.7497   TCTAACAACCAAAAA          GGAGCCTCCC ATAT GGGAGGCTCC           TTTTTGATGGCTGAC 100 154
        chlP 2041365 .. 2041403 +   -22  -4.25283   ATTTTGCATATAAAA   GCCAAAGCCCTTTAGATT CAA AACCTAAAGGGCTTTGGC   TTTTGATACAAGCAT 100 56
        panB NONE
        hisH NONE
    AM1_2050 NONE
    AM1_2051 2044655 .. 2044680 + -10.5  -3.57144   CTGGCATAAACAAAA         TCAGAGAGACG AACC CATCTCTCTGA          TTTACAGATAACAAA  80 32
    AM1_2056 2051029 .. 2051047 +  -7.3  -5.03713   GCATTCCAACAAACT             GGCCCCC AATTC GGGGGCA             TTTTATTTGCTTATT  89 277
    AM1_2058 2053512 .. 2053528 +  -6.5   -3.6715   ATAACTCTCAAAACC              GTTAGGG CAA CCCTTAC              TTTCCCCTTGAATGC  63 21
        galE NONE
    AM1_2060 2055774 .. 2055788 +  -2.7  -3.53343   CAATTTCAGCTAGCT               CGGCC TTGAT GCCCG               TTTGGACAACAGATT  49 152
    AM1_2065 2058807 .. 2058829 +    -4  -2.92091   GCAAGTCTCTATTCC           TCCCCTCTGC CAG GTTGACGGGA           TATATCACTAAGTCT  47 96
    AM1_2066 2060463 .. 2060476 +  -3.1  -3.39895   TGTCTCTGATAACGA               G-GGGA TAC TCCCAC               TTCATTAATCCAGAG  47 276
    AM1_2068 2061633 .. 2061643 +  -2.4   -3.0119   AAGCTGATCGTTACA                 CCTG TAT CCGG                 TATATCCTGTTAAAT  42 135
        serS 2063146 .. 2063157 +  -2.2  -3.15427   CAGGTGTCTAATCAT                CGAG CAGT TTCG                 TTCCTCACCCATGTT  43 207
        sppA NONE
    AM1_2071 2064824 .. 2064841 +  -5.7  -4.09685   ATTTTGGAAACAATA             GAATTAA GCAA TTAATTC              TTTTGAACAGTCACA  68 169
    AM1_2072 2065051 .. 2065074 +  -8.1   -5.2189   CTAACATAACCAACA          GCAGCTCAG GGTCAA CTGTGCTGC           TTTTTTCGTGGTTCA  95 82
    AM1_2074 2067266 .. 2067277 +  -5.8  -3.91897   GCCAGCCGGTGCCAG                GGAG AAAT CTCC                 TTTCTGAATCAGGCC  64 502
    AM1_2077 NONE
    AM1_2078 2069861 .. 2069873 +  -4.1  -4.18018   CTTCCGCTACCTCAG                TTGTG CCT CGCAA                TTTTGGATCCAAGGC  62 100
    AM1_2088 2080566 .. 2080582 +  -7.9  -3.05596   TTGTGGGTCTTAGAA              TGACCCC ATA GGGGACA              TTGCATGAGGGAATA  62 321
    AM1_2089 2083044 .. 2083084 +  -4.7  -3.63744   ATCAGATGAAACTGC  GTTGGAATTCAGGTTGAAG TAA CATCAACTTCAGATCCAGC  TGTTTTACACAACAA  57 82
    AM1_2092 NONE
    AM1_2093 NONE
    AM1_2094 2086857 .. 2086874 +  -4.9    -3.794   AACAACCTGAAACCC             CGCT-AGA TTA TCTGAGCG             TTTGATCACTTCCAA  59 264
    AM1_2096 NONE
    AM1_2098 2088615 .. 2088625 +  -3.2  -3.32993   GAGGTCGCTATCATA                 TGCT GTA GGCA                 TTGCTCTCTAGGTCC  48 375
    AM1_2101 NONE
    AM1_2102 2092116 .. 2092130 +  -7.1  -2.52543   CATAAAGAATTCGAC               CCCAG ATAAG CTGGG               TCGCTTCAAGGGAGT  58 36
    AM1_2105 NONE
    AM1_2106 NONE
    AM1_2107 2096011 .. 2096022 +  -7.2  -4.11216   AGTCTAACCTGTTCA                GGCC GTTG GGCC                 TTTTGCCAATAAAAC  71 213
        rpoD 2098033 .. 2098053 + -16.9  -4.20516   CCAAGATCACCCTAA            GGGGATCGC TAA GCGATCCCC            TTTCTTGCATCAAGG 100 62
    AM1_2111 2098786 .. 2098797 +  -5.8   -2.8294   GGTTAACGGAACGCT                GCCA ACGG TGGC                 TAATTCTGCGAGATA  52 141
        msrB 2105597 .. 2105612 +    -9  -2.90219   GGGGTTAACCTCAGA              TTGGGC TATA GCCCAA               TCTCTGGAACTTATA  67 58
    AM1_2116 NONE
    AM1_2117 NONE
        ilvH 2108151 .. 2108161 +  -4.6  -2.56271   TGCAAAGGACGACGA                 CGGC GAG GTCG                 CTCTTCTGATGAAGG  46 351
        ccb3 2110062 .. 2110078 +  -5.9  -5.14563   CTTACCTTGAACAAA              TTCTGGA GTG TCTAGAA              TTTTTTGGTGGAAGC  85 165
        clpB 2117449 .. 2117476 + -14.2  -3.65199   CTAGACCATAATCGA        ACCCCCTAGAAC TATC GTTCTAGGGGGC         TTTGAGTGAGGAGTT 100 54
    AM1_2128 2121450 .. 2121460 +  -2.6  -3.25946   TCAAATTTTTCGGAG                 TTAA AAC TTAA                 GTTTCTTTAACATAA  46 120
    AM1_2129 2124000 .. 2124016 +  -6.5  -4.07568   CATGCCAGATCCCTA              GCAAGGC TGT GCGTTGC              TTTTACCGAAAGGGC  67 317
        ftsH 2125961 .. 2125983 + -16.4  -5.02476   GAAAATTTCTGAAAA           GAGGGTGAGT TGA ACTCACCCTC           TTTTTTCGCAAATAT 100 53
    AM1_2131 2126949 .. 2126959 +  -4.6   -3.5944   AAAGATGCGAAGCAG                 TCCG CAA CGGG                 TTTGACAGTGTGGCT  57 77
    AM1_2132 2127245 .. 2127258 +  -5.9  -2.71497   CAAGCAACCATTGTT               GGGGT AGCC GCCCC                CTTCATTTAAAGTAC  52 87
    AM1_2133 NONE
    AM1_2134 2129328 .. 2129342 +  -8.6  -3.65224   AACTCCTACCTGATA               TGGCAT CTA ATGCCA               TTATTGGGGTGCAGT  73 206
    AM1_2136 NONE
    AM1_2139 2133486 .. 2133498 +  -3.3  -2.71924   AAGCACAAAGATGGA                GTGGA CCT TCCCC                ATTTCGAGAGGGGTA  42 120
    AM1_2140 2133888 .. 2133901 +  -6.7  -4.58283   GGGACTGGCACAAAC               TCAGC CACC GCTGA                TTTTTGAAGAGATTA  79 91
    AM1_2141 NONE
    AM1_2142 2136853 .. 2136867 +  -2.8  -4.13767   AGTGGTTGAATGCGG               CAGACT CGA AATCTG               TTTTAGGGTCAAACC  57 88
    AM1_2144 2137219 .. 2137234 +  -4.6  -3.18378   CGAGGGTGTGATTTG              CACCTG AAGT CAGGAG               GTTTCTTATGCAGAT  51 120
    AM1_2145 2138165 .. 2138177 +  -4.7  -3.89448   ATTCACGAATGATAT                CGGTC TTG GTCCG                TTGTGTCTTTTTCGC  59 76
    AM1_2147 2140591 .. 2140609 +  -3.8  -4.00882   TCTTAGGGATTTATT             CCTTCCTA ATT TATGGAGG             TTTGCTGTTATGTTG  58 35
    AM1_2148 NONE
    AM1_2149 NONE
        fadE 2147412 .. 2147422 +  -5.4  -2.73007   ATCGACTTCTGCTAA                 CTCT TCT AGAG                 CTTTACCGCGATATT  48 453
    AM1_2152 NONE
    AM1_2153 2150913 .. 2150924 +    -3  -3.34344   CTGGAAAGTCAGGAT                TATC AATT GATA                 TTCCTTGAAAGATGG  47 6
    AM1_2155 NONE
        sixA NONE
        gltA 2154423 .. 2154444 +  -2.3  -2.64274   GACTAGAATCAATCC           TTTCCTTCA GCCC TTAGGGAAA            TGGATTTCGGAGCAT  40 51
        ndhA 2155648 .. 2155683 +  -2.7  -4.42788   GGTCTGAAATTAGCG    TTT-CCTTTTGCCTTT GGTGG ATAGGCACAAGGTAAA    TTTTCTAAACTTAAA  61 2
        ndhI NONE
        ndhG NONE
        ndhE 2157334 .. 2157344 +  -2.4  -2.70774   AGAGTGGCGATCTCA                 CTGC TGA GCTG                 ATTATGCTTGAGATG  40 64
    AM1_2162 NONE
        uvrA 2161054 .. 2161075 +  -4.4  -3.19602   TATTAGAATACAGTT           GCAATCTG ATTATC CTGATTGC            TCTTGATATAGAGCA  49 56
    AM1_2164 NONE
    AM1_2165 2166627 .. 2166644 +  -8.3  -4.20918   TTACACAAAAATAAA             GCGCCCC CGGA GGAGCGC              TTTATTCAAATTAGG  79 85
    AM1_2169 2169370 .. 2169385 + -10.4  -3.05268   ACAATAACTTAAATA              CCCTGC ATCA GCAGGG               TATTGGGCGTAGTTC  76 104
    AM1_2170 2171941 .. 2171957 +  -2.3  -2.67428   GAAAACAATCTTGAG              GAAAG CTGATCC CTTTC              TGCATTCTTGGTAGA  40 17
    AM1_2171 2172848 .. 2172878 +  -3.2  -3.97307   CACAGGCTGAGAAGC       CTGACTGCCATTGG ATA TCAATTTCAGCCAG       TTCTTGTTGGGTACA  58 333
    AM1_2175 2175646 .. 2175665 +  -4.2  -3.25823   TCAGAATACATCTAA            GGAGCAGG AACT TCTGCTGC             TTCATATAAAGGAGC  51 91
    AM1_2177 2178088 .. 2178103 +  -6.8    -3.695   CTGGAGATTGAGCAT              CAGCCC CTGT GGGTTG               TTTAGGCTGTTTGGG  63 355
    AM1_2181 2184559 .. 2184572 +  -8.1  -3.35679   CAATTTTGTAGCAAG               GGTGC GATC GCACC                TTCTACCTGAGCCAG  64 476
        gidA 2187932 .. 2187972 +  -2.8  -3.92324   GGTAGCGCGCCTGCT TTGGGA-G-CAGGATGTCG CAGGTT CGA-ATCCTGTCATCCCGA TTTAATCTTAAGAGC  54 104
    AM1_2184 2188150 .. 2188161 +    -3  -2.66733   CAAGCATCAGCAATA                TAGA TTAA TCTA                 TGCTGTCAGTTAACG  42 18
        algI 2189804 .. 2189822 +  -5.2  -3.14581   TGCAAGCCAGATTGA             TGTTAGGG CCC CCCTAGCC             TGTCTTAATAAATTG  53 60
    AM1_2186 NONE
    AM1_2187 NONE
        rfbF NONE
    AM1_2189 NONE
        rfbC NONE
    AM1_2191 2195216 .. 2195231 +  -6.8  -3.25942   TGTCAACGGCTGCTA              TCCGTC TAGC GGCGGA               TTAATATCAGCCCCT  61 17
    AM1_2192 2196601 .. 2196627 +  -4.4  -2.52946   AATTCATGATGTTAA         TCAGTCTTCC TAGCTGC GGAAGACAGG         GGTTTTGTACCCGCC  45 137
    AM1_2193 NONE
        kdsB NONE
        kdsA NONE
        kdsC NONE
    AM1_2197 NONE
    AM1_2198 NONE
    AM1_2199 NONE
    AM1_2200 2205107 .. 2205140 +  -3.1  -4.30978   GAAGAGTTATTGGTA     GC-TTAAGCCCTCGAG TCC CTTGAGGGGATAGCGC     TTTTGATGGATTAAA  61 20
    AM1_2202 2206527 .. 2206546 +  -9.2  -3.49884   TTGGGGACTCAGCAT            CCACCGTC ATCA GACGGAGG             TGTTTGCTGATCTGT  71 212
    AM1_2204 2211787 .. 2211801 +  -2.9  -3.35996   TATCTGAAGTACCTA               CTATT TCCCC AATAG               GTTTTCTATCTACCA  46 449
    AM1_2211 2218203 .. 2218215 +  -3.4  -2.69471   TGATGGTGAGCACAA                TTGG GATAA CCAA                CTTCTATAGAGATGA  42 261
    AM1_2212 2218720 .. 2218734 +  -6.4  -3.21912   TTGATTCAACAATCA               GGCAGA TCG TTTGCC               TTCATCAGTTCACCC  57 315
    AM1_2218 NONE
    AM1_2219 2226445 .. 2226457 +  -3.4  -5.03715   AGAGAGGATTACAAG                GGTT ATACG AACC                TTTTTTGCAACTGAT  71 50
    AM1_2220 2226988 .. 2227005 +  -3.4   -3.7347   ATCAGAAGCGGATCC             GGCAAG CTGAAT CTTGTC              TTCTTGGGTATTGAA  53 230
    AM1_2222 2231805 .. 2231819 +  -8.6   -3.6106   AAAACCTTTATAGCT               GCATGA TGA TCATGC               TTTAACCCTCTTAAG  73 28
    AM1_2223 NONE
    AM1_2224 2234961 .. 2234986 +  -7.7  -3.74526   CACAGGGGCCTCAAT         TTGATGCTTGT CAAT ATAGGCATCAA          TTGTTCCCTTGATAC  68 403
    AM1_2226 2236493 .. 2236510 +  -8.5  -2.68821   GTGAATATTATTTGA             CCTATCA CTTT TGATAGG              TCATCTCCATTCTTT  63 269
    AM1_2227 NONE
    AM1_2228 NONE
    AM1_2229 2239316 .. 2239344 +  -3.2  -2.84325   ATTTTTAGAGGGTTT       ATGCC-AGCAATC CCCC GATTGCTAGGTAG        TACTATTTAGCAGCA  43 40
    AM1_2230 NONE
        thiL 2241124 .. 2241138 +  -5.6  -3.27704   TAGAGCTGGAGCTGA               CCAAGG TCG CCGTGG               TTGAGTTTGCCGACT  54 267
    AM1_2239 2250036 .. 2250048 +  -3.4  -3.20382   TCATTTGTACCTTGG                GATC GGCGA GATC                TTGATAGGTCTGAGC  46 47
    AM1_2240 NONE
    AM1_2241 NONE
    AM1_2242 2253614 .. 2253626 +  -4.8  -3.77087   GACTGCCAAGTCAAT                CCCA TTATT TGGG                TTTCGGTCTTAAATC  59 174
    AM1_2245 2255431 .. 2255446 +  -6.2  -3.81027   TTTTGCTTCACTATC              TACCTA CTAG TAGGTA               TTTGAATTAATTCAC  65 45
    AM1_2246 NONE
    AM1_2247 2256965 .. 2256980 +  -3.2  -2.85621   AGAACATCTACCACC              CAGGAG AATC CTCATG               ATTTCGGTTCAAGTT  43 9
    AM1_2248 2257374 .. 2257384 +  -3.2  -3.72576   ACTTAACGCCCTAAT                 CGTT TTA GACG                 TTTCATCAACAGAAG  51 35
    AM1_2249 NONE
        grxC 2258447 .. 2258459 +  -2.7  -3.08966   ATGTTTCAAACCGTC                CTTTA ATG TAAGG                TTCGCTGGCATTTGG  43 411
    AM1_2253 2260987 .. 2261011 +  -7.8  -3.03124   TGGCACTAGCCCCCC         CGC-CCCCCCA ATTC TGGGGGGAGAG          TATTGAAAGATAACG  62 144
    AM1_2255 2261735 .. 2261745 +  -6.8   -2.7873   GATGTGTACAAGAAT                 CGCT AAT AGCG                 CTTTCAGGTAATTTC  57 267
    AM1_2256 2262400 .. 2262439 +   -10  -2.59431   TGAAATTATGGTTGG  CTCGCTCGCCTCGAATGCC ATA GGTATTCT-GGCGAGGGGG  TAAATTATCGCGGGG  71 258
    AM1_2260 2264175 .. 2264213 +    -3  -2.50437   GGACTAGTCGCTATA   GGCTACGGCTCTTAAG CTGAGTT CGAAAGAGCCTCAGCC   CTGTCTTGGTGTGTT  42 87
    AM1_2261 NONE
    AM1_2263 NONE
        rpoZ 2266939 .. 2266959 +  -2.6  -2.71731   CCGGAGATTATTGGC            GAGTGA ACCCTAACC TCACTC            TGATTCAACGGTCCA  41 20
    AM1_2265 NONE
    AM1_2266 2268127 .. 2268163 +  -5.9  -4.85599   ATTCTTATATCTGGC    AAGGCTTGAAGGCTACT GAT ACTAGCTTTCAGGTCTA    TTTTTGTGCAATCAA  78 156
    AM1_2269 NONE
    AM1_2270 2270332 .. 2270349 +  -2.8  -2.84801   GACTGATTAACAATC             TAAATC ATGGAC GATTTA              TCATGTTTACCCATC  42 206
    AM1_2271 NONE
    AM1_2272 2272180 .. 2272195 +  -5.4  -2.70932   CTGGATTCTTTAAAT              CGATGG ATGC CTATCG               TAATTGAAAAGGGGC  49 3
    AM1_2273 NONE
    AM1_2275 2274730 .. 2274740 +  -2.6   -3.5627   ACTAGAATGGTGAAC                 TATT TTG AATA                 TTTACCAACTACTAT  48 151
    AM1_2280 NONE
    AM1_2281 2280909 .. 2280928 + -10.8  -3.63515   TCGGTTAGATCTCTG            TGCCATCA GGAA TGATGGCA             TTCTTCAAAATGACA  84 177
    AM1_2287 2285281 .. 2285299 +  -3.8  -3.63627   GAAGAAAGATGTCCG             CCGACAAT AGC GTTATCGG             TTTGCCATCTGCAGC  53 102
    AM1_2288 NONE
    AM1_2289 2287077 .. 2287091 +   -10  -4.51196   TGTTTACCCCAATGT               CCCCAA CCA TTGGGG               TTTTCTCCATTTAAG 100 242
    AM1_2291 2287484 .. 2287494 +  -5.4  -3.68351   CACTTTCAGCCTCCT                 TTGC TAT GCAA                 TTTGACTGATAGAAC  59 69
        dnaX 2290095 .. 2290107 +  -9.1  -3.70076   TCCCGATAGGTTTGG                TGGGG GTG CCCCA                TTTCCATCCATTTGC  74 153
        bioF 2296161 .. 2296188 +  -4.8  -3.62096   GATCCATGCACGACA        GTCCGTCTCTAA CATT TTGGTAACGGAC         TTTGACGTAATGCCC  57 427
    AM1_2300 NONE
    AM1_2301 2301218 .. 2301232 +  -2.8   -2.6296   TATGCGCTTAAATAG               GTGAGG ATT CTTTAC               GTTACTTAAAATTTG  41 188
    AM1_2302 NONE
    AM1_2303 NONE
    AM1_2304 2303339 .. 2303364 +  -3.5  -3.63054   ATATGAGAATTAGCA         TATTTATTTCT ACGA AAAAATAAATA          TTGTGTCTACCTTTA  53 93
    AM1_2305 2305467 .. 2305495 +  -3.8  -2.75074   TAGGGTTGCCCCCGA        TTGAGCTGTAGG CAAAA CCAATAGCTCAC        TGATATTGACATGGG  45 73
        aroA 2309228 .. 2309240 +  -9.1   -3.2963   TTCGGCTTTCAAGTT                GGCCA ATT TGGCC                TTGTAAAGGGGTAAT  69 359
        dacB 2312191 .. 2312202 +  -5.8  -3.38786   GCCCTGTTTCGCCCG                GGCA GAAA TGCC                 TTGATATTGAATATA  57 303
    AM1_2320 2320558 .. 2320570 +  -4.1  -3.35813   TAGAGATCTCCCCTT                GCAAG TAC TTTGC                TTAATTGCCCTAAAG  50 162
        proS 2323067 .. 2323078 +    -3  -2.74019   TAAAGAATATTTAGC                GAAA GCCA TTTC                 TACTTAGGGATTCTG  43 7
    AM1_2322 2324044 .. 2324055 +  -4.4  -2.59837   GGGGCTTCTGGGAAT                CCTA AAGA TAGG                 CTCTTGGTTTGGGGT  45 76
    AM1_2323 2325702 .. 2325715 +  -3.7  -2.75343   CTGCCAAATCACTGG               CACCC ACCT GGGAG                GTTTCCAGGTCTGGA  43 466
        chaA 2329545 .. 2329588 + -11.8  -2.57564   AGACTCAATAGGCTC TAGCCGCCCTGATTGAACCAG CGC CTGGTA-AATCATGGCGGCGA CTTCTGCCCGAGTAG  75 75
    AM1_2327 NONE
    AM1_2328 NONE
    AM1_2329 2334455 .. 2334469 +  -5.7  -3.21924   CTTTCTTCAATCACT               TGGTC AATCA GACCA               TATTCTAAAGCCTCA  55 121
    AM1_2332 NONE
    AM1_2333 2337460 .. 2337484 +  -2.1  -3.39668   TCGATCATTGGCGTT          CATCTCAATAG CGC TTAGTGTGATG          TTCTGAGGTTTACCC  45 15
    AM1_2336 2340896 .. 2340909 +  -2.3  -4.27617   TCCCCCTTGTTCTTC               AGGCA CGAC TGCCA                TTTTGATGCGATCTG  57 416
        rpoD 2344827 .. 2344863 + -14.6  -2.93382   ATTTCATTACTTACC    CTAAAGCGCCAGTGCA TCATC TGCATTGGCGCTTTAC    TGTATAAATCTGCCA 100 48
        sfsA 2345812 .. 2345831 +  -6.4  -3.36569   GGGGTAGACATTTAC            GATGGTCG ATCG CGATCGTC             TATTTAGGGACTTAC  59 162
    AM1_2343 2347170 .. 2347195 +  -3.3  -3.48276   AAATGGGTAACGAGG         TCTGTTGCC GCAGCAAA GGCAACAAA          TTCTGTAAGAACGCC  50 441
    AM1_2346 2349162 .. 2349177 +  -2.6   -2.6914   GGCAAAAACTATTGG              CAATTA GCGC TGATTG               ATTGTATCCCCGCTC  41 303
    AM1_2347 NONE
    AM1_2348 2352550 .. 2352583 +  -9.5  -3.10641   CGGACTGTCCCTCTC     CTGCCCAGCGAATCTG CAA CGGAC-CGCCGGGCAG     TTCAATCGTGGCTTG  70 154
    AM1_2350 NONE
    AM1_2351 2354157 .. 2354170 +  -2.4  -3.36785   GGTGTCTTGGCTCGG               CTAG TGGAAC CTAG                TTCATTGCCATCTAG  45 22
    AM1_2352 2355137 .. 2355157 +  -5.5  -2.59431   GATTCAGGGCCGTGA            TCTGAGA GGATAGG TCTCAGA            TGGATTGTGGAGGCC  49 68
    AM1_2353 NONE
    AM1_2354 2357182 .. 2357192 +  -5.4  -3.91412   GCAAATAGGTTAGAG                 TACG ATG CGTA                 TTTATGACCTCTAGT  63 117
    AM1_2355 2358351 .. 2358368 +  -2.7   -4.7416   CTAAGTTAAAACCTA             CATTCTT GTTG AAGACTG              TTTTTCAAGTTTTCC  64 476
    AM1_2359 NONE
    AM1_2360 NONE
        moxR NONE
    AM1_2362 NONE
    AM1_2363 2366302 .. 2366312 +  -2.4  -3.14931   CAGACTAGTCTTTAT                 CACC AGT GGAG                 TTGCTAAGGCGTGGA  43 243
    AM1_2364 2366938 .. 2366948 +  -3.2  -3.97674   TTTAGATTCAACGCT                 CGAC AAT GTTG                 TTCTTTCAGTCCTGG  56 74
    AM1_2365 2368020 .. 2368055 +    -4  -3.71649   GTAAAACTGCAAAAT    TAGAGGACCCA-CTGCC CTA GGCAGCTCAGTACTCTA    TTTCCCCTTTGACGA  54 41
        tuaD 2369685 .. 2369703 + -14.6  -4.88407   TTCTACGGTTTTGAT             CGGCTTGC TCT GCAAGCCG             TTTTTCGTTGGGTGG 100 220
    AM1_2369 2372402 .. 2372413 +  -5.8  -3.21593   GAATATTGGCACAAC                CGAC TTCA GTCG                 TCTTCTGCCAAACTA  55 258
    AM1_2371 2373607 .. 2373627 +  -2.5  -2.59447   CCGCTGTTATCGGTC            GCAGAGG AGGTTTG CCTGTGC            CTGTTCTACTTACGG  41 80
    AM1_2372 2374450 .. 2374460 +  -2.4  -3.25177   TGCTCAAAGCCAGAC                 GCAC TAT GGGC                 TGTAATTTTTTGAAC  45 146
    AM1_2374 NONE
        glmS 2379913 .. 2379936 + -16.8  -3.16822   ACTCTTAAAGCATAA          GCGCTCTCAG ATTT CTGAGAGCGC           TTAAATCATTGTTAT 100 46
    AM1_2377 NONE
    AM1_2381 NONE
    AM1_2382 2385816 .. 2385830 +  -4.2  -3.80733   ATTAATTCTACATAG               CGCGAT TTC ATCCCG               TTCTTCTGACCTCAA  57 129
         nrd NONE
        nrdE 2389057 .. 2389080 +  -6.1  -3.34013   TTCTTGGCAGCGGAG          GGT-CACAAC CGCTA GTTGTGCACC          TTGATTGAGCAGGTG  57 379
    AM1_2389 NONE
    AM1_2390 2395872 .. 2395898 +  -6.6  -5.41143   ATCCTAAAAAAGTCG         TTGCCAATTCAC CTT GAGAATTAGCAA         TTTTTTTAGGCACTA  89 195
        phkA 2399595 .. 2399609 +  -5.6  -2.57211   AGATCGAGTCGTACG               GTGGGA TTG TCCCCC               ATTCTCACACCGGAT  48 488
    AM1_2399 2406133 .. 2406149 +  -2.1  -4.09685   ACACAGTTTAGTGGA              CGAGTGG ACA CCACGAG              TTTTCAGACATGCGC  55 279
    AM1_2401 2407547 .. 2407558 +    -3  -3.99275   CATAATATTTCCCAT                CTTT GATA AAAG                 TTTCGTGTTCTGTAC  56 203
    AM1_2403 NONE
    AM1_2404 2410510 .. 2410521 +  -2.2  -3.64912   CAGGTGTAAGCACCC                GCGT ACTG ATGC                 TTGTCTCTATGACTG  50 406
    AM1_2406 2410956 .. 2410968 +  -3.3  -3.31915   ATGACTTCTCCATGG                GGTAG AAT CAACC                TGCTTTTTATCCAGG  47 59
        rpiA 2421863 .. 2421883 +  -8.4  -3.49924   TCCCATCGTTATCAA            GGAAGTAT GGGTG ATACTTCC            TTCTGATCATTTCAC  71 43
    AM1_2421 NONE
        phhB NONE
        gidB 2429135 .. 2429149 +  -4.2   -3.8709   CAACCAGTGGAGGGT               GCTATC TCG GGTGGC               TTTATGGACGGATTT  57 488
    AM1_2426 2431622 .. 2431634 +  -3.5  -4.81083   TCTTTGCACATAACG                TTTTT TAG AAAAA                TTTTTCATAATTGGC  70 168
    AM1_2427 2432160 .. 2432173 +  -3.9  -4.18058   CTTGAGAAATCGGCA               TGTTT TGAG AAACA                TTTTACACTCTGGTT  60 228
    AM1_2435 2440792 .. 2440809 + -11.3  -3.07043   CGCAATCAAAAAAGA             GGCTCTG CAAG CAGAGCC              TCTTGAGGTAGTCAA  84 104
    AM1_2439 2445243 .. 2445257 +  -5.6  -3.90112   TGGGTGTTCTAGAAC               CCGGTC AGT GACCTG               TTTGCTTAACAGACA  63 178
        dnaK 2447282 .. 2447306 +   -13  -5.53991   ATTACTCCTTCTAAA          CTCTGCTCTT AATCA AAGAGCAGAG          TTTTTTTCATGAGTG 100 99
    AM1_2441 2449757 .. 2449796 +  -5.1  -2.90212   CATGGATTCTAGACA GAGGCCAATGA--GCACCA TCCT TGATGCAATCTTTGGCCTC  TGTCTAGAATCCTGG  50 154
    AM1_2443 NONE
        thiD 2455575 .. 2455593 +  -2.5   -3.5032   CAAAGCTCTCTCTTT            CTTGAGAT AATT ATC-CAAG             TCTTTGCTGTCAAAG  48 108
    AM1_2445 2456199 .. 2456215 +  -6.7  -2.51193   AATTTTTAACAGAGA              TTATTTC GGT GAAATAA              ATGCTTTTATCAATT  55 67
    AM1_2446 NONE
    AM1_2448 2457941 .. 2457958 +  -3.4  -4.63486   TCACAACCATAGATT             C-CAGCC CCCCA GGCTGCG             TTTTGTTCGACCACT  66 86
    AM1_2452 2465404 .. 2465437 +  -5.4  -3.08508   GTACACCGACTGCTT     TAAGGTCAATGAAT CATCAC ACTCATTGCCCTTA      TGATTTTCGACCATC  53 23
    AM1_2453 2466950 .. 2466979 +  -3.6  -3.55444   TTGGGATACATAGAA      TGCGATCGCAGCGG TATT CCGCTGC-A-CACA       TTTCAAAGATACGGG  50 237
        psaA NONE
        psaB 2477429 .. 2477455 +   -21  -3.75153   GATAAATAGATTAAT         CCCCCCTCAACA TAG TGTTGAGGGGGG         TTTCGATTGAAGGGA 100 63
    AM1_2462 NONE
    AM1_2463 2482266 .. 2482301 +  -2.6  -4.14013   GCTTCATGACAGTTA    GTTTTCTCTATCAATC TTGA GATAGAGATAGGAAAC     TTTTGACAACTTTTA  57 330
    AM1_2464 2486552 .. 2486563 +  -4.4   -2.9661   AACTATGAAGGAAAT                GAGT GAGG ACTC                 CTTTATCAATAATTG  47 489
    AM1_2467 NONE
    AM1_2468 2492801 .. 2492821 + -11.9  -3.29144   TGCCAGGTGAACTGT            TGCGTGATC TGC GATCGCGCA            TTCTGAGACAACTGC  82 125
    AM1_2470 2495297 .. 2495311 +  -2.8  -3.31248   GCGATACAGACGCAA               CGCT TCGTCAT AGCG               TTCTAAGGCCTCTTG  47 416
    AM1_2474 2499457 .. 2499475 +  -5.9  -3.17798   TACGAGATGAATTTT             GGGGCCA GCTAA TGGCCAC             TTGGCTGATTTATGC  55 14
    AM1_2475 2500514 .. 2500524 +  -2.4  -3.23853   ACCTCAACGTTTTGT                 GAGC AAG GCCC                 TATTGCTTCCAACCA  45 70
    AM1_2476 NONE
    AM1_2477 NONE
    AM1_2478 NONE
    AM1_2479 NONE
    AM1_2480 2507898 .. 2507908 +  -3.2  -5.46698   TTTTGAGGGAAAACC                 TTGC AAC GCAG                 TTTTTTGCTTTTGAA  81 330
    AM1_2482 NONE
        miaE 2510330 .. 2510341 +  -5.8  -3.78934   ATTAGAGGATAGGAG                GCAG CATT CTGC                 TTGTTATGGCGAAAG  63 36
    AM1_2484 NONE
    AM1_2485 2512803 .. 2512826 + -10.2  -5.13344   CCACAATTTCAGAAA          GCCCCACGAC TAGA GTTGCGGGGC           TTTTTATCTTGGTAT 100 171
    AM1_2490 2515506 .. 2515533 +  -9.2  -3.99236   ATGCCCTTCAATATA        CCGATGGTTTGAG CCT CTCAT-CCATCGG        TTAATTTTTTCTCGA  83 60
    AM1_2491 NONE
    AM1_2492 NONE
    AM1_2493 NONE
    AM1_2494 2519205 .. 2519224 +  -3.5  -3.36648   CAGCATTCAACGTTC            GCTGGTA GCATGA TCCCAGC             TTATAAAATCTCTTG  49 18
         trx 2519748 .. 2519764 +  -4.5  -5.24129   TAACAATGTAAAATG              TTTTACA AAC TGTAAAG              TTTTTTATCGAAAAC  80 165
        nuoL NONE
        ndhM 2523561 .. 2523587 + -15.2  -3.95219   TAATAGGTATACAAA         CCCCCATGCTGA AAT TCAGTGTGGGGG         TTTCTGACATTTGAC 100 72
    AM1_2498 NONE
    AM1_2499 2525901 .. 2525930 +  -2.3  -3.10641   GGTTCCAACTTACCG       TTTCAGCGAGAG CGATAAT CTCTT-CTGAAA       TTACATCCTCCGTTG  43 431
    AM1_2502 2527324 .. 2527336 +    -2  -2.90496   GAACGGCCAACGAGT                TTGA TCCGC TCAA                TGGTTTGACCACAGG  40 74
    AM1_2508 NONE
    AM1_2509 2540206 .. 2540216 +    -4  -2.73364   ATCAACTTCAGGATC                 TTGA ATT TCAA                 TGGTTCCACTAACCC  44 498
    AM1_2514 2550991 .. 2551008 +  -7.7  -2.78715   ATCGCTAAGGAATGT             GGACCTG CACT CAGGTTC              TATGGTCGGGGGGTT  61 228
    AM1_2515 2551761 .. 2551776 +  -6.2  -3.12847   CTTGTGAGGGGGCTG              CAAACA TTGA TGTTTG               TTGCCTCTCCAGCTT  57 57
    AM1_2516 NONE
    AM1_2517 2555466 .. 2555482 +  -3.6  -3.36968   ACACCGCATTAATCC              CCCGCT TTCGC AGCAGG              TTATGCACTTGCGTC  48 452
    AM1_2522 NONE
    AM1_2523 2559334 .. 2559352 +  -7.4  -3.28712   CCACCCTGACGGTCT             GCTGATCA AAC TGGTCGGC             TTCTGCAGGGGAGCG  62 145
    AM1_2525 2560224 .. 2560234 +  -5.4  -2.60075   AGCCAGTCCCAGGGC                 TGGA CCA TCCA                 CTTCCTTGAACGCGA  49 97
    AM1_2526 2561207 .. 2561217 +  -2.6  -4.14422   AATTTTATAGACTAC                 TTTT GGC AAAA                 TATTTTTCTCTATGA  57 397
         mpg 2562826 .. 2562846 +  -7.5  -3.66896   TCATGCTGTCTCTTG            GGCAGATTC TCT GTGTCTGCC            TTGTCTATCTGTCCC  68 347
        umuD NONE
        umuC 2564616 .. 2564629 +  -5.3  -2.58999   CACCAAGCACAAGAC               CATCA TTAC TGATG                CTTGATATGTAAAAA  49 154
    AM1_2532 NONE
    AM1_2537 2573354 .. 2573380 +  -5.9   -3.0353   GCATCTGTTGCCTAC        AGCAAGGC-CAT CCCC ATGTGCCTTGCC         CTTGTTTATGGGACG  54 85
    AM1_2538 2573983 .. 2573996 +  -2.3  -4.22927   CTTACAAAGGCCGCC               CACCC TCTA GGGTC                TTTGTCTATTGGTAG  55 293
    AM1_2540 NONE
    AM1_2541 2577823 .. 2577835 +    -2  -3.14132   AATCAAAATTATTGA                TTGA AGTTA TCAA                TTAATGCCAGCCACA  43 22
    AM1_2545 2583229 .. 2583248 +  -2.8  -2.62168   GTCTCCCCTGGCACT            GACAAAGG CTCG CTTATGTC             CTGCTTTTGTTTTGC  41 289
    AM1_2548 2586440 .. 2586454 +  -2.1  -4.16943   GGTCTGCAAAGTACT               CAGAG ATATC TTCTG               TTTTAGCCTGTGGGC  57 393
    AM1_2556 2593168 .. 2593190 + -10.6  -3.80133   TATCAAGACGCCTGA           TGCCCCCA ACTCAAC TGGGGGCA           TATTTTGTGCGGGTC  86 55
    AM1_2559 2595764 .. 2595784 + -11.9  -5.77853   CAATCACTTATCTCT            TCACCTCCT TTA GGGAGGTGA            TTTTTTTTGACCATT 100 79
    AM1_2560 2597310 .. 2597334 +  -7.9  -4.21275   ACTTCAAATCTCTCC          TCTTCAGTTCA AAT TGAGCTGGGGA          TTTTCCATCAATTCA  76 487
    AM1_2563 NONE
    AM1_2564 NONE
    AM1_2565 NONE
    AM1_2566 2605803 .. 2605821 +    -3  -2.62983   CAAACGGCATAACCT             CGGATGCA AAT TGCAAGCG             TGATATCCCAATGAG  42 29
    AM1_2567 NONE
    AM1_2568 2607893 .. 2607903 +  -3.2  -3.29511   GGTCGAATGCCCGAT                 CGTT GCT GACG                 TTATCAAGGAATGAA  47 103
    AM1_2569 2609400 .. 2609411 +  -2.2  -3.53343   GCGAATGAAGCCTCT                CTGC TGAA GTAG                 TTTGGCACCAACGTT  47 87
    AM1_2571 NONE
        devC NONE
    AM1_2573 2613340 .. 2613350 +  -3.2  -3.55043   GCAAACCCTTACAAG                 GGTG GGG CATC                 ATTTTTGCTTACTTA  49 366
        lepB NONE
    AM1_2575 2614648 .. 2614658 +  -6.8  -3.05816   TCTTGTATACCGAGT                 GCGA TGA TCGC                 TTAGATAAAAAGTCC  58 171
    AM1_2577 2615900 .. 2615913 +  -4.5  -4.48987   TCATCCCAGAGTTGA               CTGGC TTCG GTCAG                TTTTCCTTCTAGAAC  71 457
        rpoE NONE
    AM1_2581 2619916 .. 2619928 +  -4.1  -2.78596   AACATTACGCAAAGA                GCTTT TCC GAAGC                TCTGCTAGGGAAATA  45 167
    AM1_2588 2626202 .. 2626213 +    -3  -3.83502   GCCATCGAATAAGAT                TTCA AAAC TGAA                 TTTCGTATCAACCTA  53 108
    AM1_2589 2628788 .. 2628822 +   -13  -3.60348   GAAAATCAAATTCAT     GGCCAACCAGGATT AGTATTC AATCCTGGTTGGCG     TTATCTAGTCTTAAC 100 84
    AM1_2590 NONE
    AM1_2591 NONE
    AM1_2592 2631543 .. 2631560 +  -4.9  -3.14463   TGGACAGCAAAATGC             CTC-CATC TTT GATGTGAG             TTGCTCAAACCCCTT  50 108
        vanW NONE
         mdh NONE
    AM1_2599 2640678 .. 2640690 +  -4.7  -3.30124   AGATTCGTCTTCGTT                CTGCC AGT GGCTG                TTCTAAAAAATGGCG  52 508
    AM1_2603 NONE
    AM1_2604 2642221 .. 2642233 +  -6.3  -3.17051   TAGCAATTTTCGATG                CATTC GCC GAATG                TCTTCATAGTCAGCA  57 421
    AM1_2608 NONE
    AM1_2609 NONE
    AM1_2610 2646023 .. 2646049 +  -5.9  -3.87815   CACTAAAACAAGTTC        CCGTGATAGGCA AGAT TGCTTGTC-CGG         TTTATGAGGATCGCA  64 195
        purL NONE
        purF 2651727 .. 2651737 +    -4  -3.51232   TCGAGCTGATAGCGA                 GTTT GCA AAAC                 TTGGTTTGGCAAGAA  52 317
    AM1_2616 2656449 .. 2656483 +  -8.8  -3.23018   TGTTGCAAGCCTCAT    CAGGTAAGGGTAGCGA CCCCA TC-CT-CCCTTACCTG    CTTTTGATGTCTAGG  69 92
    AM1_2617 2657483 .. 2657497 +  -8.6  -3.01712   GTAGCAGAGTCCAGT               TGCGAT CGC ATCGCA               TCTTCCAAACCACAA  63 248
    AM1_2619 NONE
         cmk NONE
    AM1_2621 2662620 .. 2662630 +    -4  -2.80895   AATTTATCACCACCG                 TTAG CCG CTAA                 ATTCTATCTCTTGAG  46 15
        cruP 2665018 .. 2665032 +  -4.2  -2.71144   ATTGTCGGTATCCAC               GCCGTA TAG TAAGGC               TAATTCCCACGACTA  45 73
    AM1_2623 NONE
    AM1_2624 2666024 .. 2666062 +  -2.5   -4.2717   CGTATCTGATGGAAC  GGCCATTACTCAACGATA GGTG TAATATTG-GTGATGGCC   TTTTACTGGCATCCT  57 158
    AM1_2627 2666730 .. 2666745 +  -3.3  -3.11073   GATAATACCCCCGTA              GCATT CAAAAC AATGC               CTTTTACATCCAGTC  46 209
        petM 2671068 .. 2671078 +  -3.2  -4.38712   TGAATGACCCCAGCA                 GCTT GAG GAGC                 TTTTGTGCCGATAGG  63 286
    AM1_2634 2673568 .. 2673579 +  -2.2  -2.69921   GTACCGTGAGCACAC                TGGG ACAA CCTA                 TGCCTTCTTCTCCTT  40 40
        cbiT 2674286 .. 2674302 +  -4.5  -3.95036   ATTAACCTCAGCCTT              TATCTTT CAG GAAGATA              TTATTTAGCCTGCTT  61 133
    AM1_2636 NONE
         pgl 2677221 .. 2677232 +  -4.4  -2.51133   GGCAAGATCAAAACG                TCTG AAGA CAGA                 GTTGCTGAGTGGCTG  45 129
    AM1_2638 NONE
    AM1_2639 NONE
    AM1_2640 2681180 .. 2681193 +  -3.8  -3.27022   CCAGCTGGCAAACAT               CAGC CCCGTT GCTG                TTCCTGTAACCTGAA  50 500
        fusA 2686076 .. 2686110 +  -9.3   -3.4052   TCAATAAACAGCAAG     CGAACGGCGCATTCT CCAAA GGGGTGTGCCGTTTG     TTAGTTGAGTTAGGA  74 52
    AM1_2645 2686507 .. 2686517 +  -2.4  -2.77043   GTTTTCGCGCATCAG                 GACC AAT GGCC                 ATTTGGGCTGCTGCG  41 69
    AM1_2646 2687862 .. 2687876 +  -4.9  -3.09784   TCACCCAAACGAAAG               GTCGC TTGGT GCGGC               GTTTCTTCAGGCTCC  50 323
        surE 2692455 .. 2692481 +  -2.3  -4.09628   CCCCTCCAGAAACGC         CAATCCGTG ATTTGATCA CACGAATTG         TTCTTATTTGGGCTA  55 11
    AM1_2651 NONE
        ribF NONE
    AM1_2653 2695559 .. 2695591 +  -7.7  -2.64155   TAAGTCAGCACATAA      TCGATCCCCTCGTAT TTT ATAAGTGGGGATGGA      TGCCTTTGCCAACGG  60 182
    AM1_2654 NONE
        gidA 2698754 .. 2698785 +  -3.2  -3.78208   CAATACACGAGAACC      GTTGGTGAAGAAT ACTACAA GTTCTT-ACCAAC      TGTTTTCGTATAGCT  53 112
    AM1_2656 2699558 .. 2699571 +  -5.2  -2.71712   CCTTGACAACCGGTT               CGGG CAATCC CCCG                CTTTCAACCCCCAAC  48 295
    AM1_2658 NONE
    AM1_2659 2701436 .. 2701452 +  -5.1  -2.83082   GATTTCAGGTTTTAC              CAACTCA GGC TGAGCTG              TATCATCAAGTTTTT  50 119
    AM1_2662 2705092 .. 2705116 +  -5.7   -3.1886   TCCGTTCTAAAAGGA          TTCCGCTCC ACCATAC GGAGAGGAA          TTGCTGAGATTAAAT  55 453
    AM1_2665 2708059 .. 2708070 +    -3  -3.54543   ATCACTGGCAGTAAG                TAAC GCTA GTTA                 TTTAACGAGATAGCT  49 23
    AM1_2666 NONE
    AM1_2667 2709621 .. 2709636 +  -7.6  -2.79679   TTATCGATACCCGCT              TCGTCT ACAT AGACGA               TCTGATGAGGGTGTT  61 482
    AM1_2670 NONE
    AM1_2671 2711186 .. 2711198 +  -4.1  -3.46602   ATTACATTTCCACCC                GATTC ACT GAGTC                TTGTAGTGTGACAGG  52 84
    AM1_2674 NONE
    AM1_2675 2713832 .. 2713846 +  -4.3  -2.61681   GATACTTTCGAACGA               TCTGT TAGGC ACAGA               GTTCTGAGATTAAAC  45 4
    AM1_2680 NONE
    AM1_2681 2719180 .. 2719192 +  -3.5  -3.85165   AACAGCAGTTATTGT                TATTT GTA AAATA                TTTGACTTTACACTA  56 334
    AM1_2682 2721187 .. 2721215 +  -2.5  -3.75378   ATTTAATCTATAACT       CCCATT-CTTAC CGCTGA GTGAGCAGTGGG        TTGTCTTGTACGGCT  52 69
    AM1_2684 2722135 .. 2722145 +  -6.8  -3.80133   ATTACGGGCTTCTTC                 CGCT TGT AGCG                 TCTTTTCTAGGGCTG  66 472
    AM1_2685 2723131 .. 2723141 +  -2.4  -2.62522   TGATTATCATGGCAA                 TGGC TCT GCCC                 ATTAGTCTTCACTGA  40 10
    AM1_2686 2723734 .. 2723759 +  -2.5  -4.96501   ACTCAACATCCATAG         CCGCGGTTGTT GACG AACAATCAAGG          TTTGTTTTTGTCGCC  70 147
    AM1_2688 NONE
    AM1_2689 2725362 .. 2725374 +  -4.8  -3.41053   AGGAGATGCAATTCC                GGTC GTTCG GACC                TTGTCCATGGTTTGC  55 108
    AM1_2690 2726356 .. 2726369 +  -4.5  -3.10641   ACTCCCCCCACACGA               TGCGG TCTT TCGCA                TTAACTGATAGGTTA  51 47
    AM1_2691 2727083 .. 2727101 +  -7.4  -3.19157   CTTGAATATCCTGAG             GCAATGCA GCT TGCAATGC             TTGATAGGCTTCCTG  60 89
        rpmB NONE
    AM1_2696 2728745 .. 2728758 +  -2.3  -2.64726   GGAGACATTTTCTCA               AGCCA TCTT TGGCG                CTTAATGTTCTCCCC  40 7
    AM1_2697 2730072 .. 2730086 +  -5.8  -2.78438   AGACCGGGAAGCAAA               TAAGAA CCG TTCTTA               GTTTGCGGTATAGTG  53 68
    AM1_2698 2730814 .. 2730843 + -16.7  -3.10796   ATCCAAGGTTTACTT       CGAATCTGTCTAA AGAT TTAGACAGATTCG        TGTTGCCTGATCGCC 100 13
    AM1_2700 NONE
    AM1_2701 NONE
    AM1_2702 NONE
    AM1_2703 NONE
    AM1_2704 NONE
    AM1_2705 2737566 .. 2737577 +    -3  -3.86106   AAGTGCATTAATCTA                TTGA TGAC TCAA                 TTTCATCATTAATCT  53 30
    AM1_2706 2738664 .. 2738678 +  -3.6  -3.04263   AGCTAATTTATACGA               GTAGAT AAA ATTTAC               TGTTAGAGGTGACAT  46 35
    AM1_2707 2740596 .. 2740615 +    -3  -2.61383   GTCCCTGGATTAACG            TTATTGAT TAGG ATTAATAA             GTTATGGCTGAAAAT  42 15
    AM1_2708 NONE
    AM1_2709 2741469 .. 2741485 +  -3.8   -3.2592   TAAAGAGAAGTTGCT              GATTTA TTTAT TAAATC              TATCTTCATTTCTAT  49 46
    AM1_2710 NONE
    AM1_2711 2744464 .. 2744480 +  -2.3  -4.00443   ATCATTAAACCCTAG              CTTTG ATCACGC CAAAG              TGTTTTTACTGGTAG  53 290
    AM1_2714 2747907 .. 2747917 +  -5.4  -3.78953   TATTCCTTGTTCTAA                 CTCA TCT TGAG                 TTTCATAATACCCCT  59 435
    AM1_2716 2749651 .. 2749664 +  -5.3  -2.91126   GAGACATCTTGCGAG               GTGAA GCTT TTCAC                TGTCATGTAGTTTAT  52 523
    AM1_2717 2751356 .. 2751392 +  -6.7  -3.63515   CTTTCCACATCATGA    TGAGTCAGATCATGG CTGTACT CAATCATCTGACTCA    TTATTAGAACTACGG  65 95
    AM1_2719 2753713 .. 2753733 +  -4.7  -3.64198   CTGAAATTACTCCAG            TCTCTGATC AAA GATCAAAGG            TTATATCTATCCACA  57 305
    AM1_2721 2754919 .. 2754937 +  -8.9  -2.58714   AGTAGGGCGGTTAGC             TGGCTGA CTTGT TCAGCCA             TGCCTTGATCTAGCC  66 44
    AM1_2722 2757730 .. 2757747 +  -2.8  -3.26722   ATGTGTTGCTTGACA             TATTCT TATATC AGAATA              TATTGTGAGTATGGC  46 145
    AM1_2723 NONE
    AM1_2724 NONE
    AM1_2727 2762278 .. 2762289 +  -7.2  -2.64747   CTCATGCAGCATAAA                CGGG CCAC CCCG                 CTTATACTCCCCTCG  56 378
    AM1_2730 NONE
    AM1_2732 2767070 .. 2767083 +  -3.1  -2.53822   CTGCAGCTTCAGGGG               TCGAT GCCT GTCGA                ATCTTGTCGCATAAG  40 311
    AM1_2733 2767632 .. 2767660 +    -4  -3.68962   AGATTTTGGTTAAAT       CTCC-CAAAAAAA GATA TTTTTCTGAGGAG        TTATCTGTCTTAAGC  54 28
    AM1_2734 NONE
    AM1_2735 NONE
    AM1_2736 NONE
    AM1_2737 2770043 .. 2770054 +  -3.6  -3.96148   AGGTCACTAAAGTCC                CTGC ATGA GCGG                 TTTGTGCTAAGGCCG  55 338
    AM1_2739 2775726 .. 2775736 +  -3.2  -4.57073   ATCAGCCATCAGGGC                 GTTC GAG GAGC                 TTTTTCAGCAACGTA  63 160
    AM1_2747 NONE
        acsA 2784492 .. 2784543 +  -5.2  -2.52676   CCTAAGCACGCACTA TCGCTGATGAGGTTGAGTCTGT AAGCATCC ACAGCCCTAACCTCATCACCTA TGGCTTACAGGCCTC  49 36
    AM1_2750 NONE
    AM1_2751 2789061 .. 2789081 +  -8.3   -2.9296   AGGCCCTGCTCCGTT            TGCAGGGCT TCC AGTTCTGCA            TATAGTTCAGCTTTG  63 169
    AM1_2753 2790452 .. 2790462 +  -5.4  -3.72576   GATTGATATTGAAGC                 CAAC CCC GTTG                 TTTAGTCGCCCCACC  59 10
    AM1_2754 2791148 .. 2791167 +  -4.2   -4.6468   GGATAGAGTTAAGCC            TCCCCTCA AGTC TGGAGGGA             TTTTCTATAATTTCA  68 120
    AM1_2755 2791689 .. 2791699 +  -6.8  -2.62246   AGACGGCGTAAAGAT                 TGGC AAA GCCA                 GTTGCTTCCCCTTCC  56 40
        petJ NONE
    AM1_2757 2792745 .. 2792758 +  -2.3  -3.28447   CTATAATTAATCTTC               CCCCT AGCC AGGAG                TGTTATCATGCCTAC  45 44
        pdxJ 2793492 .. 2793528 +  -6.5  -4.64766   GGTCGAGGTTAGGTT    TGCAGCAGTTGCTGAGC GGA GGTAATCAGCTGCTGCG    TTTTTCCGATATCCA  77 29
    AM1_2760 NONE
    AM1_2761 2799253 .. 2799270 +  -4.9  -3.28864   AACAGCGTTATTATC             TTCTCAGG CAA CCTG-GAA             CTTTTATGGTGATAG  53 300
    AM1_2762 NONE
    AM1_2763 2800358 .. 2800374 +  -4.4  -4.57755   GAGATACCTGAACTT              TCCTGA ACAAA TCGGGA              TTTTATCTGCTGAGT  66 153
    AM1_2764 2800755 .. 2800774 +  -2.1  -3.02461   CAACTTGCCGTAAGA            GAACGCA TACATT TGCATTC             TCTTACAGCAAGTTG  42 53
    AM1_2765 2801446 .. 2801457 +  -2.2  -2.87881   ACGTCCGCAGTCACG                CTAG CAGA CTGG                 TCTCTCAACACATTA  41 57
        recN 2803468 .. 2803478 +  -3.2  -3.93583   TGCCCCATCTGTAAC                 GGCT ATG AGTC                 TTTATGCCTGCATTC  56 76
    AM1_2767 NONE
    AM1_2768 2805368 .. 2805383 +  -3.2   -2.7012   CGGAACAGTATGCAT              GAGTCA AACT TGACCC               TCGTCTCATCTATTC  42 13
    AM1_2769 2806100 .. 2806110 +  -2.4  -4.74103   TCAATCACGACTGTA                 GCCC GGT GAGC                 TTTTTCAATTACAGG  67 247
    AM1_2771 2807248 .. 2807262 +  -3.5   -2.5497   TTAAGTCTCCAACAG               GGCAG CGTAT TTGCC               GATTTTGATATTGAT  44 366
    AM1_2772 NONE
    AM1_2773 2808219 .. 2808233 +  -8.6  -2.91582   GGTGGCATTCTGTAA               CTTCAC CGA GTGAAG               TGTGTGACTGCACTC  65 59
    AM1_2774 2809185 .. 2809208 +  -8.2  -2.60813   TGGTAGCGCTTTAAC          TCATTCCCTG GATG TGGGGAATGA           ATATTTAAGGACATC  61 463
    AM1_2778 2810543 .. 2810556 +  -2.3    -3.445   TGTAAACTTGCTACC               CCAAC TGCC GTCGG                CTTTTTGCTCAATCC  47 287
    AM1_2779 NONE
    AM1_2780 NONE
    AM1_2781 NONE
    AM1_2782 2814202 .. 2814230 +  -7.6  -4.19177   CCCCTCAATAACAAA       GAATGCCG-T-CAC TCA GTGCAACGGCATTC       TTTATATTGCCCAAT  76 343
        sdhA 2817352 .. 2817367 +  -3.2    -5.252   CCATGTTGTTGACAG              TAGCTG CTAG CAGCCA               TTTTTTATCCCCATG  79 343
    AM1_2787 NONE
    AM1_2789 NONE
    AM1_2791 NONE
    AM1_2792 2824817 .. 2824843 +   -16  -4.64844   ATAGCTCTCAGTCGT         GGTCAGTGATGA TTC TCATCGCTGACC         TTTTGTATATCTGGG 100 104
    AM1_2793 NONE
    AM1_2794 2825936 .. 2825946 +  -5.4  -3.10677   CCCAGCCATCAACCG                 CTTG CTG CAAG                 TTGGATCGGTTAATT  52 153
    AM1_2796 2828587 .. 2828597 +  -3.2  -3.87638   TTGTGCCTAGGTAAG                 CAGG AGT CTTG                 TTCTTACTTCGTTTA  53 202
    AM1_2797 NONE
        cyaA 2829803 .. 2829833 + -20.6  -3.36273   GCATTATTTATGATA       TCAGCCCTCATGTC TAA GGCATGAGGGCTGA       TTGCTGTTCAGGCCG 100 49
    AM1_2803 2835225 .. 2835235 +  -5.4  -3.55262   CGCTCTGCTCTCAAA                 GCTA AGC TAGC                 TGTTTGATTGAGCTT  57 8
    AM1_2804 2839096 .. 2839109 +  -3.8  -3.67188   AGATATTCAACTGGT               GCTC TAAGGT GAGC                TATTTTCCAGTGGGT  53 19
    AM1_2805 2843383 .. 2843398 + -10.4  -2.72144   TAGATGGCCATGTTC              CCAGCG AGAA CGCTGG               CTTTGAGCCGCCTGG  69 461
    AM1_2809 NONE
    AM1_2810 NONE
    AM1_2811 2849927 .. 2849954 + -14.2  -3.76492   GACTCCTTAAGCAAA        TAGCGACGGCCT AAAA AGACCGTCGCTA         TTTGCTCAAATTCAG 100 53
    AM1_2814 2855094 .. 2855111 +  -4.9  -2.56477   AAACCAATGAGTCGA             CGT-CGTA AGT TACGGACG             CTATTGATCTGTTTT  47 18
    AM1_2816 NONE
    AM1_2817 2857715 .. 2857741 +  -3.7  -3.14211   GTAGCTACCACCTGT         GCGGTAGAT AAAAAGGCG ATCTTCCGC         TTGCTGAAAAAAGGT  46 104
    AM1_2821 2862316 .. 2862326 +  -5.4  -3.01726   TTTAATTGAGTTCTG                 TGAG TGC CTCA                 ATTTCTCTAGCAGAC  52 169
    AM1_2822 2864400 .. 2864411 +  -2.2  -4.26903   AAACCGCAATAATGA                TGGG AATG CTCA                 TTTTCATGAGGTGCA  58 75
    AM1_2823 2867237 .. 2867251 +  -5.6  -3.98256   CATTGGGTCACAGGT               GCCGCA ATT TGCTGC               TGTTTTTGGTAGGCC  64 82
    AM1_2825 2869059 .. 2869077 +  -2.4  -2.57564   CTAAAGTGAGGACGA             TGCTTTCT GGC AAAAAGCG             CTTGTGAAACCGTCG  40 137
    AM1_2826 NONE
        ycf3 2870481 .. 2870511 +  -2.6   -3.7331   CGTCGGCTAGCCCTA       GGAAAGAGGT CAGTCCTTTAA ACCGCTTTCC       TCTTTTCCTCACCCT  50 31
    AM1_2829 NONE
    AM1_2830 2873609 .. 2873634 +  -2.5  -3.87914   AACTTCATCACTCTA         GATTCAAGCCT ATCT AAGCTTGGCTC          ATTTTTTCTTCAATC  52 177
    AM1_2831 NONE
    AM1_2832 2875978 .. 2875995 +  -5.6  -2.75064   CGGGAGAATCAACGT             TTACCG TACATT CGGTAA              TGATTGGCTCCGCGG  53 327
        speB NONE
        hypA NONE
        hypB NONE
    AM1_2836 NONE
    AM1_2837 NONE
    AM1_2838 2881377 .. 2881391 +  -4.2  -3.35046   CCTTCGCCTTCGACT               TGGCCG AGT TGGCTA               TGTTTAAGGACATAG  50 229
    AM1_2845 2889592 .. 2889605 +  -2.4  -3.54741   TTCATGGACGATTCA               GTCA ATCCGA TGAC                TTTACCCAGATAGTC  47 70
    AM1_2846 2890117 .. 2890148 + -10.3  -3.30364   CATCTTCATTTGCCC      CCTACTACTGAGA GACCTG TCTTGGTAGTAGG       CTTTATTCTTCTGAA  78 155
    AM1_2852 2895270 .. 2895280 +  -5.4   -3.5627   GGTTTAGGGGATAAT                 GACT AGC AGTC                 TTTAGAACATCCTCT  57 64
        murF 2897134 .. 2897144 +  -8.2  -3.36492   AATTTCATCAGTTCT                 CGGC GCT GCCG                 TTCTGGGGTTGAGCC  66 514
        btuR 2898122 .. 2898134 +  -3.3  -2.80464   CGACCAAATTACTGA                GATGC GAC GCAGC                GTTTGCCCTTAGTCC  43 1
         dcd 2898970 .. 2898986 +  -2.2  -4.07133   ACCCGCAGCTCTCCC              CCTGAG AAGGG CTTGGG              TTCTTTATAGAAGTA  55 236
    AM1_2860 2903527 .. 2903539 +  -3.5  -3.30124   CTTAGATCTTGTGAC                TTTTT GTG AAAAA                TTATGCACGCTGAGG  49 125
        rplS 2903915 .. 2903927 +  -5.5  -2.57132   TGTAGAGGGAGTTTG                GTGTG GTT CGCAC                ATTATCCAACCAGCC  49 36
    AM1_2863 NONE
        nusG NONE
        rplK 2905735 .. 2905752 +  -5.6  -2.80958   TAAGCCCAGTGATCA             GGGTAT GCTTTA ATACCC              GTCTTTGTTCACCTA  53 38
        rplA 2906683 .. 2906720 + -10.1  -3.30124   CTAAGTCAGCGTTAT   CAAAAGACCTTGG ACCTACCTGCAC CCAAGGTCTTTTG    TTGTGGGGACTGACA  76 185
        rplJ 2907299 .. 2907311 +  -4.7  -3.11073   TCAGACTCTGATAAG                GCTGC TTA GCCGC                ATTTTCCATCCAATC  51 17
        rplL 2907813 .. 2907851 + -15.6   -2.7371   ATTCAAATTTCAAAC   TAAAGGCTTGTTAGGAGA CCT TCTCTTAGCAAGTCTTTA   ATTGTGTGATGATAT 100 97
    AM1_2870 2908765 .. 2908775 +  -4.6  -3.48276   CTACATCCACCGTTG                 GCGG TGA CTGC                 TTCTCTACGGAAGAC  55 162
    AM1_2873 NONE
    AM1_2874 2914125 .. 2914144 +  -5.8  -2.73364   GGAGGGCTGAAGTCG            CAGAATAT AAAG GTATTCTG             TAGTTCACCTAAAGA  52 31
         fbp 2915326 .. 2915346 +  -2.5  -3.19389   CTTGCGCTGAAGTCC            TAACGGCAG AAC CTACCCTTA            TTACTCGATCGATTA  44 23
         tal 2916531 .. 2916589 +  -5.4  -2.65547   TAGGCCTGACGACTC GCCCTTAGC-CTAGGGGA-TTGGGCGTT ACCCA AACGTCGAAGTGCGCTAGTGCAAAGGGC TGACTTTCACCGTTT  49 38
         zwf NONE
        opcA 2919825 .. 2919837 +  -4.1  -2.83846   GGTTCCTTGCTGCCC                CTGAT GGT ATCGG                TGAGTTTTGTGTCTG  45 286
        cobB 2921622 .. 2921643 +  -3.7  -4.34402   CGAGACTTTAAAGCA           ACCTGCT-GA AGC TCTAGCAGGC           TTTTGGTCTCGCCAA  63 17
    AM1_2885 2925224 .. 2925236 +  -3.3   -3.1855   GCACACTTTGAGCCA                CAGAC AAT GGCTG                TTGAATGTTGAAAAA  46 60
    AM1_2886 2927447 .. 2927460 +  -8.1  -2.77043   GAACTTGCGGTACCA               GGGCA GACC TGCCC                GTTTGCGATCGTGCA  59 503
    AM1_2888 2928201 .. 2928241 + -14.8  -3.19936   TCTGGCAAATTCCCA  AAAGCAAGCGGTGTAGCC CCGAA GGTTACACCGCTTGCTAA  TTAGATTAAATGATT 100 10
        recJ 2932713 .. 2932724 +    -3  -3.71487   TGCGAGGGGGATTTT                GATA GGAT TATC                 TTATTAGCTCTGATC  51 227
    AM1_2892 NONE
    AM1_2893 NONE
    AM1_2894 2933995 .. 2934013 +  -2.4  -2.54619   GCAGGACTACATCAG             GTCTTTTG ATC CAAAGCAC             ATTCATAGGTTCTTC  39 114
    AM1_2895 2934287 .. 2934301 +  -2.8  -2.78463   CGCAAAGCGGTCAAT               GACTAT AAA AAAGTC               TGTCGTACGCCCACT  42 125
    AM1_2896 2934973 .. 2934995 +  -4.1   -3.9392   ATGGAACGTAGGGCA           GGCTGGC CCCTCTTAT GTCAGCC           TTGTTTGCAGTCAGA  59 430
    AM1_2900 NONE
    AM1_2901 2938324 .. 2938347 +  -8.2  -3.89354   ATGCTTATACACCGC          TCGACGACATG TAT CG-GTCGTCGA          TTATTGATTTAAAGG  75 200
        hisD NONE
    AM1_2903 NONE
        rimL 2941606 .. 2941619 +  -9.5  -6.06723   ATGGAAGTTCGACGG               GGGGC GCAA GCCCC                TTTTTTTTTAGAGAA 100 107
         pao 2943892 .. 2943904 +  -7.7  -2.76815   CACCTAAAGTGAATC                CCTAC TTC GTAGG                CTTATTGAACACAGT  61 246
    AM1_2906 2944737 .. 2944758 + -10.9  -3.29569   ATATTCAACTCACAA           GTACGCAGC ATGT GTTGCGTAC            TATGTTGTCTTATGC  81 51
    AM1_2907 2945541 .. 2945558 +  -2.6  -3.16564   CCACCGTACTCATAC             TGCAGG GAATCA CCAGCA              TTCCTAAAGTACGAA  45 365
    AM1_2910 NONE
    AM1_2911 NONE
    AM1_2912 NONE
        pyrG 2949472 .. 2949500 +  -3.1  -4.05446   AATCACTAAATTTTC       CCGAGACGTTGG CATCAC CCGACG-CTCGA        TTTCTGCTTGCACCC  56 89
    AM1_2916 2951704 .. 2951715 +  -2.2  -3.64198   GATGGTTTTGTTTAT                CTCT CTTT AGGG                 TTGTGTCTATGCGCC  49 170
    AM1_2917 NONE
    AM1_2918 2953318 .. 2953360 + -12.8  -3.02144   ATACAATCCAGAACA GTTAAAGCGCCCAACTTG CATTTCA CAAGCTGGGCGCTTGAGC TATTGAAACCAATCC  95 56
    AM1_2920 2954428 .. 2954444 +  -2.9  -2.64735   CATCTCCAATAGAGG              GCTGGCA CAA TCTCAGC              TGGTATGACTCCACT  41 71
    AM1_2921 2956089 .. 2956102 +  -5.9  -3.95324   TTTGCCTCAGTCAGA               GGGCG TCGA CGTCC                TTCTTCTTGCCAATA  64 202
    AM1_2924 NONE
    AM1_2925 NONE
    AM1_2926 NONE
    AM1_2927 2963327 .. 2963343 +  -3.6  -3.91897   GAAGTGGCGTTGCGA              CCAAGG TAACT CCATGG              TTTCTGGCTGAACGG  55 250
    AM1_2935 2970588 .. 2970602 +  -8.6  -2.62616   CCATCTAACGTATGG               GCAAAG AAG CTTTGC               TCATGTAGGAAATCG  61 231
    AM1_2938 NONE
    AM1_2939 NONE
    AM1_2940 2972997 .. 2973012 + -11.8  -2.80958   TTGCCAAAAAAAAAC              GCCCCC GAAA GGGGGC               ATATTTGTTGGAATG  83 54
    AM1_2946 NONE
    AM1_2947 NONE
    AM1_2948 NONE
    AM1_2949 NONE
    AM1_2950 NONE
    AM1_2951 NONE
    AM1_2953 2983064 .. 2983075 +  -2.2  -2.71731   TCTCTATAACCATGA                GCTA TCTT TGGC                 TGCTTAAGGAATGGC  40 7
    AM1_2954 NONE
    AM1_2955 2985972 .. 2985986 +  -4.2  -3.09516   CGCGATCTGCCCCAT               CTGGCT CCC AGCCAA               TTCCATACTCCGCCA  47 456
    AM1_2958 2988434 .. 2988459 +  -9.1  -3.55622   GAGAACCGTCCGACA         GGGGT-TGTCGA TTC TCGATAGACCCC         TTTAGGACCATTACC  71 306
    AM1_2960 NONE
    AM1_2961 NONE
    AM1_2962 2992958 .. 2992968 +  -3.2  -4.00348   AAGCAACCTAACCGG                 TCGT TGG GCGA                 TTTAATTCATTGAGG  56 30
    AM1_2964 2995660 .. 2995682 +  -6.4  -4.73682   TTCTCCAGTTGTGAC           GTACATTTTT AGT ACAAATGTAC           TTTTATGTTATCAGG  77 509
    AM1_2966 2996978 .. 2996995 +  -3.4  -3.67498   AGTAAAAAAACAATT             GCC-GCT TCATC AGCAGGC             TTATCTTGCGGCTTC  53 434
    AM1_2971 3002143 .. 3002157 +    -5  -3.53012   CACCAAGCCACTCGC               TCCAAT ATG GTTGGA               TTTAGACCCCGCAAA  55 302
    AM1_2973 3003229 .. 3003245 +  -4.3  -3.79071   GGATTACTCCTGGCG              CTGGGTA GCT TGCCCTG              TTTGGCTCTTCTACA  57 190
    AM1_2974 3003405 .. 3003416 +  -3.6  -3.80573   GCCTAAGCTTGAAAC                CCTC GTTT GGGG                 TTTAGTCATGGTAGG  56 35
    AM1_2975 3003811 .. 3003822 +    -3  -2.73364   GCCAGTATTCAGCTC                CTAT CTAT ATAG                 TGGTTAGGATGCGAC  42 14
    AM1_2977 3004927 .. 3004944 +  -4.1   -3.1355   GAGACTAACATTTCA             GCATCTT TACA AAGACGC              TTGAATCTAGCTAGC  49 33
    AM1_2979 3007167 .. 3007179 +  -3.3  -2.53382   TGAGCTGTCATTGCT                GAACG ACT CGATC                TAGCTTGACGATAAT  42 100
    AM1_2980 NONE
    AM1_2981 3008528 .. 3008542 +  -4.2  -4.47551   CAATGTATCTGCATT               GAAGTG AGC CCCTTC               TTTTGTAGCTTCAAT  65 404
        nirA 3012158 .. 3012169 +  -2.2  -3.88823   GTTGGAAAAGTGGTG                CTGG ATGC CTAG                 TTTAAGTTTGCTCTT  51 14
        nrtP 3013894 .. 3013928 +   -13  -5.36441   TTTTCACTCACAAAA     GACCGCAGATTCAT CGACTGA ATGAACCTGCGGTC     TTTTTTATATCAAGC 100 76
    AM1_2986 3016079 .. 3016108 + -11.6  -5.93809   ATAGAAGTTGATGAC       CTAGGGAGCAAA ATCACA TTTGTTCCCTAG        TTTTTTTTGTACAAG 100 58
        mopB 3018650 .. 3018660 +  -3.2  -2.92371   AACGATCATCCTATC                 CAGG TAA CTTG                 TGTCGTTCCCTAGAT  44 111
    AM1_2988 NONE
    AM1_2989 3020395 .. 3020409 +  -4.3  -3.60792   CGGCGTATTTCACAC               TGATC ATCTC GATCA               TTTAGCCGTTAAGCC  54 117
    AM1_2990 3021380 .. 3021400 +  -3.9  -2.72511   AGATGAGAAAAACAT            CTATGGGGG TTT TCGCCATGG            CTTTAGAACCCTGCC  44 121
    AM1_2991 NONE
    AM1_2992 3023131 .. 3023145 +    -5  -2.69964   TCTAAGCGTAAGCAA               TACTGT GCA GCAGTA               TCCTCTAATTCCACC  46 347
    AM1_2994 3024023 .. 3024053 +  -2.4  -2.65504   CTGAGTGACCACCAA       GGGAAACACCTGCA CCG TACAGGTACTCCCC       CATTTTTGATGAGCG  39 205
    AM1_3003 NONE
        truB NONE
    AM1_3005 3036439 .. 3036453 +  -2.8  -4.24963   CTGTGGAGGATTACC               TCTTAG CCC CTAGGG               TTTTGCATCCTTCTC  59 92
    AM1_3006 3037030 .. 3037065 +    -9  -4.78237   TTTCTCCAACAGATC    CCTTACGACTGAGGGG TATG TCCCTTGGTCGTAGGC     TTTTCTTCTGGCATA 100 138
    AM1_3008 3039444 .. 3039460 +  -2.2  -2.82933   ACACGCCAGGGTTAA              GCCATT GGCAA ACTGGC              TATACTGGATTAAAC  41 130
    AM1_3010 3040027 .. 3040037 +  -8.2  -2.54103   GGCGGCTGGTGCATA                 CCGG GCA CCGG                 GTTGCTGCGTGTTTT  60 331
    AM1_3012 3041965 .. 3041980 +  -3.3  -3.90241   ATTCATCCCCCCAGA              TAAGC ATCTTC GCTTA               TTCTTATGGTTGATA  53 23
    AM1_3013 NONE
    AM1_3014 3043909 .. 3043930 +  -2.9  -3.53811   GTCCAGCCGCCACAG           CCGATCACA TCCT TGTGCTGGG            TTTCCGCAAGATAGA  49 331
    AM1_3018 3046413 .. 3046428 +  -3.3  -2.79749   GAGAACATAACCACA              CTGAA GACATA TTCAG               GTTATCTTGCCGATG  43 317
    AM1_3021 3048039 .. 3048068 +  -2.9  -3.58365   GCAAATGCTTGATGC       TG-AGTTTCTACCC GAA GAGTAGCAACTGCA       TTCTATAGTCTCGTC  50 4
    AM1_3022 3049567 .. 3049577 +  -5.4  -3.55262   CGCTCTGCTCTCAAA                 GCTA AGC TAGC                 TGTTTGATTGAGCTT  57 8
    AM1_3023 NONE
    AM1_3024 3050844 .. 3050860 +  -2.2   -4.0616   ATCAGGTTACAACAC              GACACA CAATC TGTGGC              TTTGTGGTTGAAATA  53 51
    AM1_3028 3054250 .. 3054276 + -12.3  -3.51924   CTTCATGAAGCATAA        CGCCCCGCTGGC TCAG GTCA-CGGGGCG         TTATATCACTGAACA 100 52
    AM1_3032 3056968 .. 3056984 +  -5.1  -2.67513   GAGAAGGTGTTATAC              GATAGGT GGT ACCTAGC              ATTACTTATAGATGT  49 241
    AM1_3033 3058249 .. 3058260 +  -2.2   -3.9644   CTGAAGAATTGGGAA                GCAT GCTT GTGC                 TTGTTATCTTAAAAG  53 160
    AM1_3035 3060081 .. 3060095 +  -4.2  -2.62263   TCAAGCTTAGAATTT               GCAAAC CCC GTTCGC               TGATCTGACGACAAT  45 8
    AM1_3036 3060684 .. 3060702 +  -2.4  -3.58801   ACACCGAAGCTCAAC             CAAAATAC AGA GTGTGTTG             TTTGCAAGATTCTCT  49 154
    AM1_3037 3061445 .. 3061455 +  -5.4  -3.66541   TATCGCCGTTTTAGG                 GGTT AAG AACC                 TTTAGCGTCTATGTT  59 27
    AM1_3042 3065617 .. 3065634 + -11.3  -3.53224   GAGAAATAGGTAAAG             TCCCCCA CTGG TGGGGGA              TTTAGGGGACGAGTG  89 3
    AM1_3044 3068150 .. 3068164 +   -10  -2.86011   ATCATTCTGCAGTCG               GCCAGA AGG TCTGGC               TCGTGTTTCCAATTG  68 369
    AM1_3046 3071737 .. 3071749 +  -2.7  -3.39028   AGGTGATCAAGCACT                TGGAA AAC TTCTA                TCTTTAGCCCTTCTG  47 416
        folE NONE
    AM1_3057 NONE
    AM1_3058 NONE
    AM1_3059 NONE
    AM1_3060 3083081 .. 3083096 +    -4  -5.01732   TTGGGCGTTGGCCAT              TGCTTT ATGA AAGGCA               TTTTTTCAGACAATT  77 308
    AM1_3064 NONE
    AM1_3065 3091846 .. 3091857 +  -5.8  -3.86015   CAGGGCCACAGAAAG                TCGC TGAA GCGA                 TTTATCAGGCAGCTA  63 234
    AM1_3066 3092522 .. 3092536 + -11.4  -2.78798   ACGAAGGGCTGTATC               CGCCGT AAT ACGGCG               CTTTCCATGAACAAT  76 216
    AM1_3070 3095097 .. 3095111 +  -5.8  -3.83226   CAATTTCCTAGGATA               TGATAA CGA TTATCA               TTCTTCTCAATCCTT  63 247
        hemB NONE
    AM1_3072 3097460 .. 3097472 +  -3.3   -3.3506   CTAGGAGGTTCAAAT                TTGCC AGA GGCCA                TTCTGCGGGTTTCAG  47 37
    AM1_3073 NONE
    AM1_3074 3099223 .. 3099243 +  -6.1  -3.64599   GCTACCCATTATCAC            CCTAGTGTC GCC GATGCTGGG            TTTAGACTGTGGTCG  63 162
    AM1_3076 3107248 .. 3107280 +  -7.1  -6.02546   CGACTGAATCAGCAA     CGAGAGGTGAATTC TGTTCC GAAC-CACCTCTCG      TTTTTTTTACTTTGC 100 73
    AM1_3080 NONE
        rbfA NONE
    AM1_3082 3111294 .. 3111306 +  -2.7  -3.19192   ATCACTCCCCAAAAT                TTAGA GCA TCTGA                TTCGGTTGGATCAAC  44 65
    AM1_3083 3114470 .. 3114495 +  -3.2  -4.15328   CATCACAGGTCACGG         GCACCCCTTA CAAATA TTAGGGTTGC          TTTATGGTTTAAATT  58 94
        lipB 3119972 .. 3119989 +  -2.7  -2.74012   CTTTTATCTGTCATC             CTTCATC GCTT GATTAAG              TCATTACGATAATCC  42 9
        moaE 3120706 .. 3120720 +  -6.4  -3.28497   TAATGTTTCGACCGG               GTCATC GAG GGTGAC               TTCAATTTCCAATCC  59 229
        dnaA 3125876 .. 3125907 +  -8.9  -4.08767   AATATTAATTCACAC      CCTGTGGAAAA CCCCCCGATC TTTTCCACAGG       TTTTCCACAGGTGAG  83 392
        dnaN 3127260 .. 3127274 +  -5.7  -3.11584   TCGCGGTTAGCCTAG               CCCAT CAATC ATGGG               TATCTTAAGTAATAT  55 31
    AM1_3097 3127711 .. 3127742 +  -9.5  -4.87665   TTGCATCTATAAAAA      TATCCCCCGCAAT CTAACT GTTGCGGAGGATA       TTTTTATAGATGCCC 100 61
    AM1_3101 3131740 .. 3131755 +  -2.6  -4.39828   AAATTAGAGCAAAAA              TCGCACA TCA TGTG-GA              TTTTATCGGCATATT  62 152
    AM1_3105 3136087 .. 3136110 +  -2.4  -4.12738   AATGCTAGGCAACAC          GGTATTAGCA GTGA TGTTGGTGCC           TTTGGTTTCATCTGC  55 440
    AM1_3107 3137866 .. 3137886 +  -3.2   -3.1489   TGGAAGCCATTTTTC            CCTTCTGG GGTCG CCAGAGCG            TTCCATAATGTTTGG  46 395
    AM1_3109 NONE
    AM1_3110 3140131 .. 3140150 +  -2.1  -4.83169   AGGGCCAGCTAATCA            TCTCTGG GGGATG CCAGAAA             TTTTTATAAGCCAGT  67 93
    AM1_3114 3144999 .. 3145020 +  -3.7  -3.92542   CCTTGAGTTAAAAAT           TGAGATTTC TAAC GGCATCTCA            TTGTTTGCCAATCAA  58 101
    AM1_3115 NONE
    AM1_3116 3145939 .. 3145953 +  -3.5  -3.85817   TCCGAGGGTAAAGGT               GCTCG AGCCG TGAGC               TTTGTCGAACGGAGT  55 444
        pilT 3150373 .. 3150385 +  -4.1  -2.85484   TCTGATAGGTCTCTG                GTCTA ACA TGGAC                TGCTTGTGACTACTT  46 70
    AM1_3121 3151273 .. 3151290 +  -5.6  -4.59853   CTAGAGATAAGTCAT             TCCCTA CAAATA TAGGGA              TTTTTGAAGAATTCA  75 89
    AM1_3122 3152403 .. 3152416 +  -3.1  -5.13343   CCTGAAGTGCACCAT               TGTGG TCAC CCATA                TTTTGTTTTGCGTTG  74 294
         ddl NONE
    AM1_3125 3156572 .. 3156588 +  -4.4  -3.57106   TTTGCATCCTCAATT              GGTCTA ATGAA TGGACC              TTAATTTACATTCAA  52 19
    AM1_3126 3157524 .. 3157537 +  -3.7  -3.65224   AATTGAATTTCTTGA               GACGG AACT CCGGC                TTCTTGGGCTGCCAT  53 495
    AM1_3128 NONE
        aacC 3160261 .. 3160282 +  -7.3  -3.06261   GGCCAACCCCGAAGA           GAGAAGTAG ACTG CCACTTCTC            TCTTCGGGGTTGCAG  61 131
    AM1_3134 3163311 .. 3163327 +  -5.1   -3.7347   GCATCAAATAATTGT              TCAAGCC GCT GGGTTGA              TTCTTGAGTCTTACC  59 241
    AM1_3137 3165633 .. 3165648 +    -4   -2.8294   TCCTACCCTGTTTTC              TTGTGG CTGT CTACAA               TGCTTATGGGCGGTC  46 49
    AM1_3138 3166236 .. 3166256 +  -4.6  -3.80945   GACGTGACCAAATTA            CTGCGGTA TTGCT TGCCGCTG            TTGTGTTGTGTGCTG  59 40
    AM1_3139 3167760 .. 3167774 +  -2.8  -3.96618   GGGGACACCCACGAC               CCGTTT AAT AAACGC               TTCTTTAAAATTGGC  56 404
        ilvD 3171090 .. 3171117 +  -5.7   -4.2074   GGTTTTCTTGAGTAG        GC-TCTTCTTCT TTAGT AGAAGGAGAAGC        TTTGTCTATTACAGA  69 396
    AM1_3147 3176422 .. 3176432 +  -4.6  -2.95884   ATCGGCATGGATGAT                 TGGC GTT GCCG                 TATCTGGGTTGCTAA  49 266
    AM1_3149 NONE
    AM1_3151 3179312 .. 3179328 +  -6.5  -2.62158   CCACAATAGTAAACG              TCGACGG GCT CCGTTGG              ATATTGCTTCTTTAA  53 174
        ntcA 3185708 .. 3185730 +    -9  -3.92746   CTTGTATCGTTTTTT           CCACCCCTCG AAG CTTGGGGTGG           TCTTTTTGAGATCGG  76 380
    AM1_3160 3190270 .. 3190288 +  -6.6  -2.72649   GTTTGCAGCATCTGA             CGCCGTTC AAT GGACGGCA             CTTCTGTAATCAGCT  53 133
        lpxB 3195833 .. 3195848 +  -4.6  -2.77899   AAGAATCTTGGGATT              GGCCAT CGCG ACGGCC               TAATTCGTAGACGCC  49 39
    AM1_3168 NONE
    AM1_3169 NONE
    AM1_3171 NONE
    AM1_3172 NONE
    AM1_3173 NONE
    AM1_3174 3202974 .. 3202997 +  -7.5   -4.5442   TGAAAAAATGAAAAA          GACATCAGT GGTTAA ACTGGTGTC           TTTTGTAGTTGAAGC  78 53
    AM1_3175 3203383 .. 3203394 +  -4.4  -2.80879   ATTCGATCACAGGAT                CTGT AAGA ACAG                 CTTGTTGGGCTTCAT  45 124
    AM1_3177 3204944 .. 3204961 +  -5.5  -4.07568   CGTCTTAGAGGAAAG             GGGAGGA GTCC TACTCCC              TTTTCGAGGGCCAAG  64 108
    AM1_3180 3209477 .. 3209504 +   -15  -3.19175   ATCCTCTAAGTAAGT        TA-GCGGCAGGCT CTG AGCCTGCCGCATA        TTCCATCTGTTGGCA 100 32
    AM1_3181 NONE
    AM1_3182 NONE
    AM1_3183 3215900 .. 3215914 +  -8.6  -2.58714   TAGCCATTACAGTAA               GCTTGA GAG TCAAGC               TAAATTGGTATAAGA  63 434
    AM1_3191 3228196 .. 3228209 +  -3.1  -4.19817   CCCCCATTTGGGTGA               GGTTG GGGC CAATC                TTTTGACTCAGTAAC  59 75
    AM1_3192 NONE
         hli 3230689 .. 3230709 + -18.3  -4.88495   TAGTTCGCGCTTTAA            GCCCCCAGC ATT GCTGGGGGC            TTTTCTTATATCTAT 100 80
    AM1_3196 3237105 .. 3237118 +  -2.4  -3.97307   GATCAAGGATGTTTT               TCTG ATTTGA CAGA                TTATTGTTCACTCAA  53 71
    AM1_3197 3238550 .. 3238574 +  -3.6  -3.05715   AGCACCTTTCGAGAA          CTGCGATG CTGGGGTGA TATCGCAG          TTCCCTCACCCACTT  46 39
        nuoK NONE
        ndhD NONE
    AM1_3200 NONE
    AM1_3201 NONE
    AM1_3202 NONE
    AM1_3203 NONE
        mnhB NONE
    AM1_3205 3243388 .. 3243398 +  -5.4  -3.53012   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 207
    AM1_3208 3245434 .. 3245451 +  -3.3  -4.08216   AAGATGGCTCGCTCT             GCCTCTG TGGC CGGACGC              TTTTGGCCCCGCTCC  58 79
    AM1_3210 3248730 .. 3248740 +  -2.4  -3.56643   TGCACATCAGGCTTG                 GCCC ATT GGGG                 TTTGAGAGATATGCG  47 404
    AM1_3212 3251148 .. 3251159 +  -5.8  -2.62396   CCCATCGGTTTGCTA                GAGC TAGC GCTC                 TCCTCTCAGCAAATC  52 68
    AM1_3213 3251842 .. 3251880 +  -7.5  -5.24129   AGTCTCTTGTACCGA   TGGGGTAATCTTCCAAG CGCTT CTATGAAGATTGCTCCA   TTTTTTATAGGGGCC  90 137
       groEL 3254018 .. 3254039 + -10.9  -5.24989   CTGAGTCTTGCAAAA           CAGCTTGTC ATCT GACAGGCTG            TTTTTTGGTGTATGA 100 78
    AM1_3215 3254868 .. 3254894 + -15.3   -4.9218   TTACTTAAAAAGCAA         TGCCCTCGATT TAGCT AATCGAGGGCA         TTTTTGTGATGGATA 100 61
    AM1_3219 NONE
    AM1_3220 NONE
    AM1_3221 3260525 .. 3260557 +  -3.5  -3.41302   TCTTGACTTGGTATT     GCTATATTGTCAGG ATCTTG CCTG-CAGTATTGC      TCTTTAAAGTGTTCC  48 314
    AM1_3223 3264469 .. 3264479 +  -5.4  -3.02829   TAGACCAAAAGTCTA                 TTCC ACA GGAA                 TCTTGCACCGATCTG  52 38
    AM1_3228 3268467 .. 3268487 +  -3.1  -3.17075   GGGGTTGTAATCACA            TCCCAAGGG ACT TCCTGGGGC            TTCAATTGGACGCGC  45 305
         hli 3269901 .. 3269919 +   -11  -5.18355   CATCATCCATGCCAA             GCTGAGGT ACT GCCTCAGC             TTTTTGCTTTTTAAA 100 51
    AM1_3232 3271513 .. 3271532 +   -10  -5.08255   TCATTATCAAACTGA            CCTCAGCT ACAT AGCTGGGG             TTTTCTTTTGGGGGT 100 293
         hli 3271910 .. 3271931 + -13.7  -5.01553   CATCTTTAATATTTT           TTCCCCGGC ATGT GCCGGGGAG            TTTTATTTATCAGTT 100 73
        rpoD 3272962 .. 3272987 +  -7.7  -5.24129   TCAATCTGCGCATCA         GCTACTCTT CTGCCTGC AAGAGTAGC          TTTTTTGTAACAGAA  95 57
    AM1_3235 NONE
    AM1_3236 3273638 .. 3273650 +  -4.1  -2.78015   TCAGATTTTCACTTT                TTGGG TGG CTCAA                CTTTCGGGTCATTGA  46 150
        ftsH 3275642 .. 3275666 + -21.5   -4.7629   TGTTTTCCTTTTAGA          TGGCCCCCTGC TTA GCAGGGGGCCA          TTTTTCGGTTGATGG 100 52
    AM1_3238 3277894 .. 3277910 +  -2.9  -2.56011   AGATGATGGCTCCGG              TGATCAG TTT CCGGTCA              ATGTCTTTGCGGTTG  40 192
    AM1_3241 NONE
    AM1_3243 3279538 .. 3279551 +  -8.1  -4.25104   TGTCCTTGTTGCTGA               GCAGC CCAA GCTGC                TTTTGCTGCAGACAG  75 295
        gdhA NONE
    AM1_3245 3282025 .. 3282040 +  -3.2  -4.38472   TAGTCTATCTTGATA              GCTAGC ACCA GCTAAC               TTCTTTTGATTTCCA  63 500
    AM1_3248 3284554 .. 3284570 +  -9.4  -2.61341   GTGCTTCCCCCGGTT              CTGGGC GAGAG GCCCAG              TCAATTGCATTTTTC  63 341
    AM1_3251 3286185 .. 3286197 +  -4.9  -2.55668   CGAACAACCCATAAA                GAAAA TAG TTTTC                ATTACTATGAACCTG  47 54
    AM1_3253 3287497 .. 3287507 +  -4.6  -3.33969   GGCTTTCCCCTAAAG                 CGTC GAT GGCG                 TTATCCAATAGATTG  52 485
    AM1_3257 NONE
    AM1_3258 3291924 .. 3291934 +  -6.8  -2.84171   CTCAATTGCCCCTAA                 CGCT TTC AGCG                 TCGCTTTTTGAGCAT  54 84
    AM1_3260 3295783 .. 3295803 +  -5.5  -3.55563   AGTGACTCCCTTGAA            TGAATGG TCTCTCC CCATTCA            TTTACCCAGTGAAGT  57 61
    AM1_3262 3296725 .. 3296735 +  -3.2  -4.38712   ACGGTAATGAGAGAT                 CAGG CAG CTTG                 TTTTGTCCGGCTGAG  63 285
    AM1_3268 3305761 .. 3305782 +  -2.9  -3.42699   TTGATAATCTCCAGC           TTGGGCACG CAGA CTTGCTCGA            TTGTAATAGGTCACT  47 403
    AM1_3271 3309182 .. 3309192 +  -2.4  -4.28188   GGTCTACCCTCAGAC                 CCAG GTG CAGG                 TTTGTATTGTCCATC  58 128
        ccmK NONE
    AM1_3281 3314715 .. 3314726 +    -3  -2.89881   GATGGTTGTGCTGGT                CTAT GAAA ATAG                 TGTGTCGGATGGATG  43 360
    AM1_3282 NONE
    AM1_3283 NONE
    AM1_3284 NONE
    AM1_3285 3318980 .. 3318992 +  -4.1  -3.72576   GCCACGGAATCAGTC                GATCA AAC TGGTC                TTTGCTAAAGGAAAG  55 268
    AM1_3293 NONE
    AM1_3294 NONE
    AM1_3295 NONE
    AM1_3296 NONE
    AM1_3297 NONE
    AM1_3298 NONE
    AM1_3299 NONE
    AM1_3300 NONE
    AM1_3301 3329184 .. 3329199 +  -2.6  -2.85228   GTTAATATTTCAAAC              TTTTAC GGAT GTAGAA               ATCTTTCTCTTTGCG  42 295
    AM1_3302 3334581 .. 3334594 +  -5.3  -2.75481   TGACAATGGTTTTAA               TCATC ATGA GATGA                TCGTTAACATTGAGC  50 51
    AM1_3303 NONE
    AM1_3304 3337371 .. 3337383 +  -3.3  -2.70354   CGGCAGGTTTAAATC                CGCAA TTG TGGCG                TAGGTTTCTGAAAAA  42 418
    AM1_3307 3339677 .. 3339721 +  -5.9  -3.18086   TTTGTTCTCAAAATA T-TCGGTCGTCAAGCATAGCA ATGGC TG-TGTGCCTGACGACCGGCA TTAGCTCTATCGTTT  55 78
    AM1_3310 3343149 .. 3343176 +    -7   -3.1236   AGGAATATGCTGAAT        TAGCGCCAAATC ATGG GATTGGGCGATA         TGGTTTTGCAGTTTG  60 503
    AM1_3316 3348894 .. 3348909 +  -3.2  -2.57026   TAACTTGGTTGTCGG              CAATGG TCAC CCTTTG               GTTGGTATCAATATA  42 223
    AM1_3321 3354361 .. 3354373 +  -2.7  -3.02511   CACTCCCTAAATCCA                TTTTG GTT CAGAA                TGTTGCGGACATCAC  43 105
    AM1_3322 3354846 .. 3354862 +  -2.1  -4.05033   CTCTTGGGCTGATTA              GCGACCA ACG TAGGCGC              TTTGTCTCCGATCAG  53 103
    AM1_3323 NONE
    AM1_3324 3358375 .. 3358410 + -19.2  -2.87931   GGAAATTTCATAATA    GAGAAACCAGGAGCTA TGCT TAGCCCCTGGTTTCTC     TATATGCAGAGTGAA 100 56
    AM1_3325 NONE
        cbiB 3359977 .. 3359987 +    -4  -4.61231   TTTCCTGGAAGAAAA                 CAAA GCT TTTG                 TTTTTGGGGATATAG  68 357
    AM1_3330 3364771 .. 3364794 +  -5.2   -3.0894   TCAAACACTAGACAA          TCAGCTGGCT CTAA GGCGAGCTGG           TTGAGTGCATAGTTG  51 256
        gatC 3367025 .. 3367046 +  -3.8  -2.66733   GGTAAGGACATACTT           CTC-CTAGA CTGCC TCTAGTGAG           TGATGTCGGTTACAA  44 121
        ndhH NONE
    AM1_3334 3369124 .. 3369144 +  -7.5  -2.92389   AAGACCTGAGGTAGT            GGCACAGGT ATG GCCTGTGAC            TGTCTAGATCCCTTG  61 116
    AM1_3335 3369445 .. 3369463 +  -3.2  -3.36868   AATATAAAAAGCGAT             TTTTATCA AGT TGATTAAA             TGATTTTATTTGTAT  47 149
    AM1_3336 3370658 .. 3370676 +  -7.4  -3.97741   ATGGCGAGGTGAGCC             CAAGCTCG TGA CCAGCTTG             TTCTTGTTCCGGTTT  72 73
    AM1_3341 3374252 .. 3374265 +  -6.7  -3.96483   GGCCTTCCGTAATCT               CCGTA TATA TACGG                TTGTTTGGATCAAAT  69 217
        tyrS 3381314 .. 3381338 +  -5.7  -3.73359   AAACGACAGGCTTGG          TTGAGATCGTG CAA CACCATCACAA          TTGTCTTGCCTTGTT  61 368
    AM1_3351 3385631 .. 3385647 +  -5.9   -3.9941   CACTTCCATCCCGCG              CCATAAT TGA GTTATGG              TTTGCTTCTCAACCC  66 20
    AM1_3354 3388581 .. 3388591 +  -5.4  -2.80195   ACACCGCAGGCTAAG                 TAGG CGC CCTA                 TCGTTAATACTAAAT  50 57
    AM1_3355 3389267 .. 3389282 +  -3.9  -3.78022   TCGTGGAATTGTCCT              GCCTG GGGAGA CGGGC               TTTGCTAGGTGTAAC  56 95
    AM1_3356 3390433 .. 3390444 +  -4.4  -2.73124   GCCGTCCTGCCGACT                CCTT ATTT AAGG                 CTTTGGCAAATAAGC  44 516
    AM1_3359 3393832 .. 3393852 +  -4.1  -2.56914   GGCTGGCTAGATAGT            TATTAAGAA TTC TTCTCAATA            TAAATTACTAGAGTG  45 20
         hli 3397817 .. 3397833 +  -5.9  -3.36694   ATACGGTGGATAACT              CTCTTGT TTG ATAAGAG              TCTTTGGCCATCCCT  57 154
    AM1_3363 NONE
         hli NONE
         hli 3400862 .. 3400875 +  -3.8  -3.51924   AGATAATCAAAAATT               GTGG GTTTTA CCAC                TTCTGTGACTGAGAA  52 411
    AM1_3372 3404166 .. 3404195 +  -9.4  -4.85918   TAACACAGTCTACGT       TCCCTGAGGAGT AACCGC ATTTCTCAGGGA        TTTTCTTCTATCATC 100 75
    AM1_3373 3404798 .. 3404813 +  -3.2  -3.39803   CAGCTTAGGGCATGG              GCCG GAAAAAGA CGGC               TTCTGAATATACATC  47 89
        tcmP 3405990 .. 3406005 +  -5.4  -4.39227   TACATTGGACGAGTG              GTGACG ATGG CGTTAC               TTTGGTTTTATTTAT  68 45
    AM1_3378 NONE
    AM1_3379 3408542 .. 3408568 +  -2.3  -3.20387   TTTAGGGCTTAAACA         CATTGACTG AAATCTCAG CTGTCAATG         TATTCAATATTTTGG  43 29
    AM1_3381 3409492 .. 3409516 +  -7.1  -3.65656   AAATAACGATGGAGA          CCACCGTCATT GCT AACAACGGTGG          TTCTCTATGTACTGG  68 39
    AM1_3382 3410814 .. 3410838 +    -3  -3.29144   ATGCCTTCAGAATAA          TTTATTGAGA TTCAT TCTTGATAAA          TTCTGGCGGAAATGA  47 91
    AM1_3383 NONE
    AM1_3384 3414171 .. 3414184 +  -2.3  -4.14243   AGAAGAGCCTCCATA               CCTGG GTAT TCGGG                TTTTCAACTGCAATC  55 76
    AM1_3385 3414940 .. 3414951 +  -2.2  -3.77196   TTTTGCTGGAGATAG                GTTG TGGT CAGC                 TTTACTGACTCATGA  51 61
    AM1_3386 NONE
    AM1_3387 3416701 .. 3416751 + -15.1  -3.22223   ATGGATGCAGGCTAC TTGTCTGCAAGCACAAATCAGGATC CTA GA-CCTGATTTGTGCTTGCAC-CGA TTACTGATCAAATTG 100 97
    AM1_3395 3424757 .. 3424769 +  -4.1  -3.08867   ATATCCTTGGCCCAA                TGGAG TTG CTCTA                TATCTTGGGCGTTCA  47 405
    AM1_3404 NONE
    AM1_3405 NONE
    AM1_3409 3442317 .. 3442329 +  -7.7  -3.19091   CCCCGTCTCACCAAT                GGTGA CCG TCACC                TTCGTCGATAGCTGT  62 253
    AM1_3413 NONE
    AM1_3414 NONE
    AM1_3415 NONE
    AM1_3416 3448204 .. 3448220 +  -6.6  -2.84687   GTTTTTGCACCTTGT              CTGCAA TTCAT TTGCAG              TGTCGTACTGATTAC  57 325
    AM1_3417 NONE
    AM1_3418 3450890 .. 3450930 +  -9.7  -5.00616   GTCCTCTTCCATCCA  TTTCTAGCCCACAAGCGTT ACT AACGCTTGTGGGCTGCCGC  TTTTTTGGCCAGCAG 100 40
    AM1_3419 NONE
    AM1_3420 3452275 .. 3452304 +  -2.1  -3.36823   GGAATGGCCCAACTG       GACTGCTGCAT CACTTGAT ATTCAGCAGGC        TTGGGTTTTGAACCA  45 129
    AM1_3423 NONE
    AM1_3424 3455294 .. 3455308 +  -6.4  -3.12936   CCTTTGACCCAGCCT               TGAGCC GTT GGCTTA               TCTTGCACTTTGACT  57 118
    AM1_3429 NONE
    AM1_3430 NONE
    AM1_3432 3462452 .. 3462465 +  -2.3  -5.22258   TTGCGCGTTTAATGC               GGCGT TGCC AAGCC                TTTTGTTTTGCTTTG  76 354
    AM1_3434 3463394 .. 3463405 +  -2.2   -2.7566   AGAATTTAGCCTTTG                GTGG TTGA TCAC                 TGCTTAAGCTTAACT  41 7
    AM1_3436 3464601 .. 3464616 +  -7.6  -3.12999   CAGGGTTTGGAGGGG              TTGGCA CTCT TGCCAA               TTGCGTCTGCGATCG  62 199
    AM1_3437 3467992 .. 3468021 +  -5.1   -3.2964   TTGAGGGGCAATGAT       GTCGTC-TTGCTTT GGC AAGGCAAGGAAGAC       TTATCGAAACGATTT  55 96
        hflX 3469749 .. 3469764 +  -7.6  -3.23216   TAAAGCTGCTTATTG              CGTGAT CGGT ATCACG               TTGGTCATCATCCAA  63 56
    AM1_3439 3470031 .. 3470060 +  -4.9  -3.10164   TCGTAGGATTTGTAA       TGATGGGAAGTGC TATG GCCCTGCTCATCG        TTCCGTCCTAAGTGG  51 44
    AM1_3441 3470556 .. 3470566 +  -6.8  -3.22086   GGAGAAAGGAGGCGG                 GCAG ATC CTGC                 TATTAATCCTTCTGT  57 302
    AM1_3442 3471801 .. 3471840 + -18.1  -3.77722   GCTACATGCTCTCTC  CCCCTTTCCATTGCAAG AGTTAC CTTGCAATAGAAAGGGG   TTATTAATGCTTGCA 100 62
    AM1_3443 3472794 .. 3472804 +  -3.2  -4.04576   TCCAAAACTTAACGT                 GCAG CTG TTGC                 TTTACTTCTCTCCGT  56 90
    AM1_3446 3475113 .. 3475125 +  -4.7  -3.22886   CTTCCAAATTCTGCC                CCGTG CGA CCCGG                TATGTTGTATAACAT  50 441
         tig 3478967 .. 3478977 +  -5.4  -3.37975   CCCAAAGCAGATGAT                 TCAG CCA CTGA                 TTCTGAATAATAGGT  55 5
        clpP NONE
        clpX NONE
    AM1_3451 NONE
        mutL NONE
    AM1_3453 3485321 .. 3485339 +  -4.5  -3.00946   TTCCGGGTAGAGAGA             TCGCCGA CGGAC TCGGCAA             TGGTTTGTAAACCCA  49 145
         grx 3498179 .. 3498190 +  -5.8  -4.53303   CTCCGTTCAAAGTAT                CTGC GAAA GCAG                 TTTTCTCTACCGCTG  73 105
    AM1_3464 3499540 .. 3499551 +  -3.6  -2.87211   TTACTTGTACTGCTC                CTCC AGTT GGGG                 TATATCGCAAGGCAT  43 334
    AM1_3471 3507609 .. 3507619 +    -4  -3.08966   GTAATGTTATTTAAG                 GAAA TTA TTTC                 TTAGATGCGATTTCA  49 410
    AM1_3472 3509299 .. 3509312 +  -4.5   -3.6336   CTGAATGATGACTTC               CGCTG GCTT CAGTG                TTCTCTGTCGTCTAA  57 130
    AM1_3473 3510046 .. 3510059 +  -5.3  -3.31322   ATACACCGTCCACAT               GTGAT GGTT ATCAC                TTCTCCAGACTTGAA  55 104
    AM1_3474 NONE
    AM1_3476 NONE
    AM1_3478 3512063 .. 3512099 +  -9.6  -4.27192   GAGTTGGATAAACAA   CCGGTCTTGA-GGTCAG CCCG TTGACTATTAAGACCGG    TTTTCCTGACCGTTT  88 2
    AM1_3481 3517504 .. 3517517 +  -5.2   -3.2981   CTGGCAGTTATAGCC               GCCC GATCAA GGGC                TTGATCCTTACTCTC  55 28
    AM1_3482 3518670 .. 3518687 +  -3.3  -4.10453   CTTCATTTCCAAACT             TGAGGGG TGAT CCTCACA              TTTTCCCCAAGTTTG  58 61
    AM1_3483 3519112 .. 3519122 +  -2.4  -4.93547   CTGTTGGATGAGCGG                 CTGG ATG CCCG                 TTTTTCCTTGCTTAG  68 30
    AM1_3484 NONE
    AM1_3485 3519882 .. 3519894 +  -2.6  -3.80133   AGGTCGGGGGTCTGG                GCGG GAGTG TCGC                TGTTTTCTGGAAATA  54 168
    AM1_3493 NONE
    AM1_3494 NONE
    AM1_3495 3529673 .. 3529683 +  -3.2  -3.29364   TGAATCTGGTTATTA                 GTGA GCA TCGC                 TTGATGATTACTAAT  48 213
    AM1_3498 3538194 .. 3538214 +  -4.7  -3.96483   CTGAACTCTACAATA            TTGGCTAGA TAG TCTGGCTAG            TTGTTTCGATCGGAT  61 124
    AM1_3499 3540405 .. 3540421 +  -6.5  -3.89435   ATCAATTCATCCCCG              CACTCAG GGA CTGAGGG              TTTGCCTTCTTTGGC  65 226
    AM1_3500 3542696 .. 3542713 +  -2.7  -4.13945   CAAAAAGTGCCTTGA             CTTAGAG CATA CTCTAAC              TTTTAAGGTACAGAT  57 452
    AM1_3503 3544046 .. 3544056 +  -5.4  -3.95324   TAAACTTTGCTTCCT                 CCAA GGG TTGG                 TTGTTGTTCCAGGTG  61 111
    AM1_3504 3546153 .. 3546176 +    -6  -3.55973   CAGAATTAACTCTCT          TTGCTCAATC CGTT GACTGAGCAG           TTGCTTATTCCCTTG  59 68
    AM1_3506 3550338 .. 3550366 +  -2.4  -3.28001   GATACTCTTCACCGT       CCAGCTGGCAGAT TGTA ATC-GTCGGCTGC        TTCGGTTTGCCAATG  45 157
    AM1_3508 3552337 .. 3552395 +  -3.2  -4.77759   TTAAGGAAGCAGATG GTGAGGGATGCCCTAGAGGTGATCGCGA AAAGG TCGCCA-CAT-TCTAGGTCAGCCATCGC TTTTTGATGGGTTCT  68 111
        aqpZ 3553653 .. 3553663 +  -5.4  -2.65808   GCTGAGCGATCATAA                 GAGA GTC TCTC                 TCAGTTATTAACGCT  49 26
    AM1_3510 3554317 .. 3554334 +  -2.7  -3.03903   GTGCGGGATTCTGTC             GCGA-TGT CCT GCAATCGC             TGTTGACGCGCTTTT  43 410
    AM1_3513 NONE
        fabD 3557298 .. 3557310 +  -2.7  -2.94411   CCCAATTTGATATGG                TCAGT CTT ATTGA                GTTCTTTGCCGAGGT  43 72
    AM1_3515 NONE
    AM1_3516 NONE
         def 3559176 .. 3559189 +  -5.3  -4.02581   CTCGTAATACCTAGG               GTGAT CACT ATCAC                TTCTCTTTTGTCAGG  64 203
    AM1_3519 3560867 .. 3560880 +  -3.1  -2.91924   GCCTATGATGCTGTC               TCATC GTCT GGTGA                CTTTATGAAAGATGC  44 164
    AM1_3520 3562105 .. 3562118 +  -4.5  -4.08216   CTGCAAAGACGAGCA               CCTGG GCAT TCAGG                TTTTGGGAGAAGTCG  62 385
    AM1_3524 3564758 .. 3564768 +  -5.4  -3.65294   CCTAGAAGATTAGAA                 TTGG AAC CCAA                 TTACTTTGTCTCAGC  59 28
    AM1_3526 3565475 .. 3565496 +  -5.9  -3.17392   AACCGAGGCCAACTC           CATTTGCTG GAAA CAGAAAATG            TTGACTTCAAGCGTC  55 339
        speE NONE
        speB 3567697 .. 3567710 +  -3.8  -3.73783   TCTTTTACAAACAAA               CGTC CTCTTT GACG                TTGTTCAATTAACTC  55 270
    AM1_3530 NONE
    AM1_3532 3572411 .. 3572449 + -21.2  -3.14931   ACACAAAACAAAAAA   CAATAGCCCCCAGCACTG GTG TAGTTCTGGGGGCTATTG   TTGATGAAAGATGAC 100 63
    AM1_3535 3577426 .. 3577442 +  -2.9  -3.57918   TCAGCCCGCGTGGTG              TTGGAGG ACA CCCCTAA              TTCTGTGATGTGAAT  49 356
         rfc 3581440 .. 3581453 +  -3.9   -3.1855   AAGTGGTGCCATGGA               TTAGA ACCC TCTAA                TTCCCTGTTGCAACC  48 22
    AM1_3538 NONE
    AM1_3539 3582461 .. 3582472 +  -4.4  -4.28049   ATTCCTACGCACAGA                CTCA ACCT TGAG                 TTTTGCAGTTTTAGG  62 214
    AM1_3545 3590500 .. 3590516 +  -2.9  -3.74747   ATTCTCAACCACTGT              CAATGTC ACG GGCAATG              TTTCATCGGGCTTGA  51 447
    AM1_3548 3593163 .. 3593175 +  -4.1  -5.44721   TTGAGAACACGAAAT                GCATT AAC GATGC                TTTTTTTGCCCTAGT  85 349
    AM1_3549 3594111 .. 3594146 +  -5.4    -2.914   GTGGGGTTGGTTCTT    TGCAGAATTGCCAAGG GCAA CGATGGTCATTCTGCA     CTTTGGTATGGTGCA  52 49
        recA 3595425 .. 3595438 +  -8.1  -2.56914   GACCTGATCCACCAC               CCGCA ACTG TGCGG                TCCATTGCTGGGGTG  57 174
    AM1_3554 3597861 .. 3597881 +  -3.3  -3.68325   AACGCAATCAGGTGA           GACAGCGG TTTATT CC-CTGTC            TTGTCTTGCCCTATA  51 63
    AM1_3555 3599022 .. 3599036 +  -4.2  -3.53761   GGAATTGTCTAATGT               CGTGAT GAC ACCACG               TTTCGAGGCAAATTC  52 103
    AM1_3557 3600746 .. 3600762 +  -5.1  -2.83371   CCAGCGGTCCTGGGT              CTTGGCA ATT TTCCAAG              CTTCTTGCTCAGCTA  49 520
    AM1_3558 3602140 .. 3602163 +  -3.9  -2.63596   TCTGTAAGCACTTGC          CAACCGGCTG GGCTA TAGC-GGTTG          TAATCTAAAATGCCC  44 251
    AM1_3560 3603459 .. 3603471 +  -9.1  -2.50935   CCTGCAAAATCTGGA                TGGGG TGT CCCCA                GTTCATAGATGGAAT  63 261
    AM1_3565 NONE
    AM1_3566 NONE
    AM1_3567 NONE
    AM1_3568 NONE
    AM1_3569 3618930 .. 3618943 +  -5.3  -3.18681   TCAAGAACTGACAGG               CAATG GAGC CATTG                TTGATCGCCTTGCGC  52 63
    AM1_3571 3621592 .. 3621610 +  -4.5  -3.50853   AGCTTCATCATGAAG             GCTTCTC CTTTT GTGAAGC             TTCTGATTACAACGC  55 53
        nifU NONE
    AM1_3575 NONE
        gldA NONE
    AM1_3577 NONE
    AM1_3578 NONE
    AM1_3579 NONE
         era 3629867 .. 3629879 +  -3.3  -3.67296   CTAGTTCTCCCGGTC                TGAGC CGT GCCCA                TTTACCTGCATCCTC  53 93
    AM1_3584 3635041 .. 3635055 +  -3.5  -4.44974   GTGGGACATTCAGAG               CGGTG GATTG CATCG               TTTTATCCGATTTAA  63 365
    AM1_3586 NONE
    AM1_3587 3636965 .. 3636978 +  -3.7  -3.38272   CGTTTAGACCGCTAG               GCCCC ATTT GCGGC                TTGTCCATAATGGTG  49 34
    AM1_3588 3638871 .. 3638891 +  -9.7  -2.90688   GATTCACTTCCAAGA            CGACCTTGG TTG CCAGGGTTG            TATCTGAGGTGATTA  68 510
        rpsT NONE
    AM1_3591 3641132 .. 3641151 +    -8  -4.18018   GTTGTCTTTACCCGT            TCAATCTT AAAA AAGATTGA             TTTTCGATACAAACG  76 16
        rpoB 3644536 .. 3644566 + -11.2  -4.41616   TTGTCTGCCGGACAG       TAGGGTTGAACGGA TGA TCCCTTCAACCCAA       TTTATTTCGAAGCAT 100 41
       rpoC1 NONE
       rpoC2 3650502 .. 3650530 + -13.2  -3.81027   ACCAGTAATCAGTAA        AAGAAGGGGCTC AATTG GAGCCCCTTCTC        TTTAGGTTAATTGGC 100 33
    AM1_3595 3651925 .. 3651936 +  -2.2  -4.07568   ACCCGACTATAAGCT                TTGG CGCC CCAG                 TTTTGCCCCACAAAA  55 491
        rpoE 3656546 .. 3656564 +  -2.5  -3.35813   TTAGATTTAAACTAG            GC-TTTCA TTCA TGAAACGC             TTGCTTGAGATACCG  46 126
    AM1_3601 3657276 .. 3657286 +  -5.4  -3.35542   AGCTGACCATAGGCG                 CTAG GAA CTAG                 GTTTTTACGCCTGAG  54 111
    AM1_3609 3666066 .. 3666082 +  -6.5  -3.22938   ATCATACAGCTGACA              TTCCCGC ATT GAGGGAA              TATTACGTTGTTTGA  57 517
    AM1_3635 3692167 .. 3692181 +  -6.4  -3.57144   TTTGGTGATGGGAAC               GCCTTT ACG GAAGGC               TTTGCCGGTGCCGCC  61 159
        crtR 3694282 .. 3694302 +  -7.7  -2.56596   AAGAACAAGACGACT            GGATTCATT TGT AATGAATTC            TGCATTACTCGGGGC  57 184
    AM1_3641 NONE
    AM1_3642 3698912 .. 3698922 +  -3.2  -3.16881   ACTTTTTCTTGGATT                 TGGT CTA GCCA                 TTGCTGCGCTACATC  46 232
    AM1_3647 3703756 .. 3703781 +  -2.7  -2.73875   GCAAGCTGTTGAAAC         TGGC-ATCAATA AAA TATTGATGGGCA         TAGTCTTGGGCCGAG  41 348
    AM1_3649 3706839 .. 3706859 +  -3.2  -4.26386   TTAGAAGTCGAAGGA            GACGATGA CTAAC TCGGCGTC            TTATTTGGTTTTTAC  61 14
        mpgP 3707764 .. 3707790 +  -3.9  -3.46081   GGGTTGGGATAGCCT        CAGTCACGTTAGC GAA GCTAA--TGACTG        TTAGTTCATTCCCTG  51 119
    AM1_3651 3708956 .. 3708970 +  -5.7  -3.35679   GGTTGTGCAGGTGGT               CTTCG TAGTT CGAAG               TTCTGAGTGACCCAA  57 441
         hli 3711371 .. 3711407 + -10.9  -4.36914   TATATTTTCGCAAAA    GTTTGAAAGCGCTTCTG CTG CAGTCGCGCTTTTAGAC    TTTTGTAAAACGAAA 100 48
         hli 3712737 .. 3712762 + -19.1  -4.18018   AAGGTCAGTCATCAA         GGGCAAGCAGG ATAT CCTGCTTGCCC          TTTTGCATGAAGAGG 100 79
        comB 3714578 .. 3714592 +  -3.5  -5.13343   GCGGGTAATGGAGTG               GGGTT TTAAT AGCCC               TTTTATTTTCCATTC  75 209
    AM1_3664 NONE
    AM1_3665 3722758 .. 3722773 +  -7.6   -2.5507   TCTTTGGAGCCATCA              GGATTG AGAT CAATCC               CTCTTGCTTCAATAA  57 343
        frdB 3724606 .. 3724641 +    -4  -3.22499   TTCTTCAGTGCGATC    GCAAGGGAATTCCG TTAAGATC CTGAAGTCCTTTGC     TGCTTTGTTTATGAG  49 93
         hli 3724847 .. 3724878 + -20.4  -3.35996   GTGGGATTGCGCTAA      TCAAAAGAGGCGCT GTAC AGCGCCTCTTTTGA       TTCTAAATAGAGATC 100 26
    AM1_3671 3727894 .. 3727908 +  -2.1  -4.11216   GCTGACGACGACCCC               TTGGT TGTTC ACCAG               TTTTGCGCCTAGGGA  55 95
    AM1_3676 3731956 .. 3731967 +  -2.2  -3.21099   CATTTGGTAAAAATG                CAGG GCAA TCTG                 TTCATCATCAGCGGG  43 482
    AM1_3680 3733504 .. 3733554 +  -3.6  -3.35813   TGGGCTAAATCGGCC TG-ATGTCACAGTCTGGAGTTGG-TC ACC GAGCCAGCTCCAG--TGTGCCATGCA TTGATTAGGCTAAAG  49 33
         gor NONE
    AM1_3683 3735129 .. 3735152 +  -2.4  -3.63744   GCGTCTCCGTCTACC          TTCGCTTCAT AGGT AGGAAGTGAG           TCTTTTGCAGGACCG  50 59
    AM1_3685 3736230 .. 3736256 +  -3.1  -3.62522   AACGCATAAAAATTT        TTA-CTTCAAGC ATTG GCCTGAAGATAA         TTGTTGCGGCCATTA  51 90
    AM1_3686 NONE
    AM1_3687 3737430 .. 3737446 +  -3.7  -3.30124   CGAGGCAATTTTTAA              TTAGGCT GAC AGCATAA              TTCTGCAAGATAGCC  49 22
    AM1_3688 NONE
    AM1_3689 NONE
    AM1_3690 3739085 .. 3739113 + -11.1   -4.9725   CTAGTTTTTAGACTG        TTGGTGGTTAGCT TCA AACTAGCCACCAA        TTTTTGTCTGAGCGT 100 45
    AM1_3692 NONE
    AM1_3693 NONE
    AM1_3694 NONE
    AM1_3695 NONE
    AM1_3696 NONE
    AM1_3697 NONE
    AM1_3698 3756867 .. 3756878 +  -5.8  -3.45027   ATAAAAGCCAGCAAA                GGCT TGCG AGCC                 TCTTTCCTCAAGCCT  59 451
    AM1_3700 3758613 .. 3758630 +  -4.9  -3.14463   TGGACAGCAAAATGC             CTC-CATC TTT GATGTGAG             TTGCTCAAACCCCTT  51 122
    AM1_3704 3762771 .. 3762802 +  -5.2  -2.87931   TTTCGACGCTCGTCC      TTCAGTATGCTGCT TATT AGAAGGATACTGAG       TCTATAACCGCTCAA  50 60
    AM1_3706 3763571 .. 3763590 +  -2.8  -3.53091   CTGCATAAAGAAAGC            CAG-GCGGG CGG CTTGCTCTG            TTTCCGGCAGACGCT  49 415
    AM1_3710 3768900 .. 3768916 +    -5  -2.77344   CAAGCGTGTAGCAAC              GAGGCC TTATC GGCCCC              CTTCTTGGAGAATGA  49 42
    AM1_3712 NONE
    AM1_3713 3772074 .. 3772090 +  -8.7  -3.66356   ACGGCAAACCGTTGA              GGGGTGA CTC TTACCCC              TTTGGCCTTCAGGGT  71 458
        katG 3774760 .. 3774813 +  -6.9  -3.07575   GTCTTAGGTGAAAGA CTC-TGATTTTACGGTCCTGTAGGAG AGA TTCTTGCAGGACTGTAAAACAACGGG TTGACTAAAACTTTT  59 57
    AM1_3719 NONE
        phnC NONE
    AM1_3721 3780441 .. 3780455 +  -2.8  -2.58999   TCGTAATTGAGCCGG               CCAG TGCCCTC CTGG               ATTCGTATCTAGGGC  41 511
    AM1_3724 3782183 .. 3782196 +  -2.4  -4.56597   GTTGAGGCTGTTGGG               GATC TTGTTC GATC                TTTTTGCGGAGGGAC  63 329
    AM1_3728 3784198 .. 3784215 +  -3.4  -3.67864   GCAATGCTTAATATA             GTGTGC AGAAAG GTACAC              TTTAGCGTTACGTTG  51 30
        terC 3785379 .. 3785390 +  -5.8  -3.63627   TGTAGCGATATGGGC                CGAC AGCA GTCG                 TTTGCGGTCTAGAGG  61 291
    AM1_3736 3789529 .. 3789542 +  -6.7  -3.14132   ACGGCAGCGTCAGGG               CTCAC CCTT GTGAG                TTGATCAAGCAAACC  59 104
    AM1_3737 NONE
    AM1_3738 3793101 .. 3793112 +  -5.8   -4.7497   ACCCAAATTCATGGC                CACC TTGC GGTG                 TTTTTCGTGACTGCG  78 159
    AM1_3744 NONE
    AM1_3745 3802969 .. 3802981 +  -3.4  -2.87243   TCAGGATAAAGAGAA                GGAA CTGGT TTCC                TGATTGTCATCATCC  43 72
    AM1_3746 3806604 .. 3806614 +    -4  -3.11302   CTGGCTTTCGAGGGC                 TTTG TTG CAAA                 ATTTTGCAGTCTTCA  49 49
    AM1_3748 3806945 .. 3806968 + -10.4  -5.27923   CCTCTTCTGATGCAA          TACCCTCGACA AGA TG-CGAGGGTA          TTTTTTATGGCGTTA 100 96
    AM1_3749 3807348 .. 3807360 +  -9.1  -2.62396   TCAGTGAATCAGCTA                GCGCT TTA AGCGC                TGGTATAGAAACCTC  66 232
    AM1_3750 3809226 .. 3809250 + -10.7  -4.87318   CTGATTGCGATAAGA          GCTAGTCGGGG CAT TCTCGGCTAGC          TTTTTCAGTTTTGAA 100 51
        menC NONE
        menE 3815313 .. 3815338 +  -9.9  -3.66666   TTTCTATAGGATTAA         GGGTTTGG-TTA CAA TAAGCCAAACCC         TTTAGCCGTTTTAAA  80 441
    AM1_3758 3818464 .. 3818492 + -16.2  -4.21275   GAATATAAAAGCAAA        GAGAGAGGATTG AGAAC CAATCCTCTCTC        TTTTGCGTCACTTAC 100 82
    AM1_3760 3821360 .. 3821374 +  -6.4  -4.05877   CCCGGTTACGGGCAC               CTCGTT TGG GACGAG               TTATTTCATCTGGTA  67 391
    AM1_3764 NONE
    AM1_3765 NONE
    AM1_3767 3824951 .. 3824969 +  -4.5  -3.78934   ACTGCCAACCCCAGC             CCCTTCT TGACT AGATGGG             TTGTTATGGGAAGCG  57 448
    AM1_3770 NONE
    AM1_3771 3827089 .. 3827116 +  -9.2  -3.71649   AACTTAGTAAACGAG        TCAGAGGCTAGC GTCA GTTGGCCTTTGA         TTTGCGCTTTAAACG  78 69
        lipA 3830406 .. 3830442 +  -7.4  -4.91712   CAAAGCCCGTGTAAT    TTGAAGAGGTGTGTCT GCAAA AGGCATGCCTCTTTGA    TTTTTCTAACTTGAC  89 142
    AM1_3777 3831556 .. 3831571 +  -4.7  -2.87501   TTTTGCTGATTAAGG              TCAGC GTTAAA GCTGA               TGATATTTCCTGAAG  49 104
    AM1_3778 NONE
    AM1_3779 3833907 .. 3833932 +  -2.5  -4.57755   GAAGAAGTGGTTTTG         GCAGCTAATGA AGAA TAATGGGCTGC          TTTTATCTCCTAACT  61 8
    AM1_3782 3836293 .. 3836306 +  -2.3  -3.14132   AGCCAGGTATTGAAG               GGCTT ACAG ATGCC                TTGATGCGCCAGGAA  43 8
        nusB NONE
    AM1_3787 NONE
    AM1_3788 NONE
    AM1_3789 3844748 .. 3844760 +  -4.1  -3.04248   GCTTGAGTTTTAACA                TTCCT TCT AGGGA                TGTTAGGGGGTGTTG  47 48
    AM1_3791 3845786 .. 3845806 +  -7.5  -3.61232   GGATTTAGGAACAGC            GGCCGTGAG AAC CTCATGACC            TGTTTCTGTGAGCAG  64 51
    AM1_3794 3848689 .. 3848699 +  -3.2  -3.57792   TGCCTGGGATTTCCC                 GCTG GTC TAGC                 TTTGAGGCTAGATAG  51 16
    AM1_3797 3854226 .. 3854240 +  -4.2  -3.15544   CAGGCTTGCTAACTG               GTCGTC GAG GACGAG               TTGCTCGAGGTGGGG  48 419
    AM1_3801 3859021 .. 3859040 + -11.4  -3.53444   GCTCAGTTAACCTTG            CTGACCGG AGGT CCGGTCGG             TTTAGCAGAGGCTAA  89 323
    AM1_3803 3859563 .. 3859573 +  -6.8  -3.21772   AGCAAGTAGTTTGAT                 TCCG TAA CGGA                 TCTTGTAGACCCGTT  59 46
    AM1_3804 3860162 .. 3860176 +  -5.7  -3.70689   TTGTGCATTTGTCTG               GGGAA TAATC TTCCC               TTGTGTATCTCTTTG  61 18
    AM1_3805 3860819 .. 3860843 + -10.8  -4.71061   CGCGTTCTGATACGA          CCTTAGGATC TTCTT GATCCTGAGG          TTTTTCCGTATGCAT 100 142
    AM1_3807 3862030 .. 3862040 +  -4.6  -3.23532   CAGCGGTGGCGTAAT                 GTCG TGA CGGC                 TGTATTGCTTTCCGT  51 484
    AM1_3808 NONE
    AM1_3809 NONE
    AM1_3810 3864373 .. 3864384 +  -2.2  -3.60525   AATGCTACAACGTTG                GCAT GTGT GTGC                 TTATCTATACATAAA  47 212
        ppgK 3867378 .. 3867388 +  -4.6  -2.61004   AAAACACATTAAAGC                 GGCG ACC TGCC                 AATTTTTGCCGATGC  46 88
    AM1_3820 3870383 .. 3870411 +  -4.6   -3.0894   GGGGTATACCCTAAG       GCACATGTCCGGT TGAG ATCAG-CATGTGC        TTGAATGAGTGCTTC  49 229
        moaB 3871468 .. 3871488 +  -3.9  -3.55444   TACCTCAATCTAACA            GGCTAGCTT GGT ACGCTAGGC            TTTAGCCCGTCGCAC  51 56
    AM1_3824 3872274 .. 3872291 +  -6.3  -2.81547   GTATTGAGTCTTGCT             GC-GTTGC TCG GCAACGGC             TAATTGCTCTGAGGA  55 460
    AM1_3825 3873469 .. 3873480 +  -2.2  -3.24447   CTGTATGAATGGGGT                CG-GC TAT GCTCG                GTTTTGTAGGATATA  45 66
    AM1_3830 NONE
    AM1_3831 3881092 .. 3881111 +  -5.8  -2.79302   ACGCGCAAAAATGGC            TTGAATTC GATC GAGTTCAA             TCTGGTGCAGATAAT  53 72
    AM1_3834 3882491 .. 3882503 +  -7.7  -3.69323   AGCAGATTCTGTCTG                CCAAC AGC GTTGG                TTTCGATAGTAATGG  68 154
    AM1_3835 3885594 .. 3885626 + -12.1  -4.56961   TTGATCAATTGATGG      CTGTAGCTGTGGGTA TTT TGCCTACAGCTACAA      TTTTCTATCAATCTT 100 84
    AM1_3839 3893085 .. 3893097 +  -3.3  -3.09732   CTCATCGATATCCAA                GACCG TAT CGGTA                ATTTTGACCTCATTC  46 311
    AM1_3849 3903623 .. 3903651 +  -3.1  -4.53737   TTCAAGTAATACTCA       CCGGCTGTCTTC TTGAGC GAGAAC-GCCGG        TATTTTTTTGTCTTA  63 132
         tgt 3904958 .. 3904968 +  -3.2  -2.60032   CCCTTAGCCGCCCTA                 GGTC AGT GATC                 CATTTTTGGCAGCAG  42 128
        psbK 3905274 .. 3905295 +  -9.5  -5.52023   CCCTAAAGTTGTAAA           GGGAAGTAA TTTA TTGCTTCCC            TTTTTTATTGGTAAT 100 121
        ribD NONE
    AM1_3859 NONE
    AM1_3860 NONE
    AM1_3865 3915961 .. 3915995 +  -2.3  -3.59979   AAGTAAGTGTTAATC    GCAA-TCATCAATGGCG TCA TGCCCTT-ATGATTTGC    TTTAACATCAGCGCC  47 326
    AM1_3875 3928494 .. 3928505 +  -2.2  -4.28069   AGATGTCTTTGCAAT                GTTC CTTA GGAC                 TTTGTTGCATTCTGT  58 69
    AM1_3877 3929348 .. 3929358 +  -8.2   -2.5655   CACCAGGCCAGATCA                 GCCG CTT CGGC                 ATTGATATCCGTAAA  60 200
        accD NONE
    AM1_3883 NONE
    AM1_3884 NONE
        psbV 3937172 .. 3937195 +    -6  -3.05384   TGCAGTTCTTTGGGT          TTGTTTGGGA GTTT TCCCCAACAG           TTCCATCGCCCAAGC  54 143
        psbV 3937770 .. 3937783 +  -6.7  -3.61178   ATCCTAAAATAATGA               TGCGA GTCA TCGCA                TTTGCCATAAATAAG  65 155
        petJ 3938241 .. 3938264 + -13.2  -4.86731   CTAGTTCATAGTTTT          CCCCCTTTTC ATAT GAAGAGGGGG           TTTTGTTTGGCCGGC 100 55
    AM1_3888 NONE
    AM1_3889 NONE
    AM1_3890 3940394 .. 3940413 +  -4.9  -2.78816   TCCGAGATGGTCAGC            CCCTCCC CTGGTA GGGAGGA             TGTAATGGCAGATGC  49 12
    AM1_3891 3941025 .. 3941048 +  -3.1  -3.38291   TGGGGATTAATGTGG          GTGAGGCTG GCCTGA TAGCCTTGC           TTGTGGAGTTGTGCA  47 116
    AM1_3897 3947244 .. 3947256 +  -6.3  -2.79796   ATCGCTAAAAATCTT                TCCTT GTA AAGGA                TCTAATGCGATAAGA  55 178
         hli 3947603 .. 3947630 +    -7  -2.54896   TGATCCAATTGATTA        GATCCTCATCTG CAAG TAGGTGGGGGTC         TGCCTTGGATGGGGG  55 45
    AM1_3899 3948322 .. 3948351 +    -5  -2.92246   CAGCGACTATAATTT       GAGGACGT-AGCG ATGTG CGATCGCGTCCTC       TATGCTTACCCTTCG  50 46
    AM1_3900 3949106 .. 3949117 +  -4.4  -3.64685   ATTTATATGGGGTTG                TGAG TTTG CTCA                 TTCTTAAAAGATTTT  54 278
    AM1_3901 NONE
    AM1_3902 3951516 .. 3951536 +  -3.1    -3.745   TTGAATTTACTGAAA            CGTTTGCCC TAG GGGTTGGCG            TATTTTGATCGCTGA  53 14
    AM1_3904 3955758 .. 3955772 +  -2.8  -4.23434   CAAAAATAAAATAGT               CCGTTT GTA AGATGG               TTTTCCAATATTTTA  59 275
    AM1_3906 3956596 .. 3956608 +  -6.3   -3.6715   TGGTACCTACCTTCT                TCAGT CAG ACTGA                TTTGGCCTTGGGTGA  63 148
    AM1_3914 3968482 .. 3968502 +  -3.2  -5.27477   ACGCCTGTTCTCGTC           CGTAGGGGC CATC GCCCC-AGG            TTTTTTGATTCGCAT  79 439
    AM1_3916 3969908 .. 3969938 + -11.3  -3.29626   TTTAATCCAAATCTC      GTCGCCCTT-CTAG TGCT CTAGCAAGGGTGAC       TTCGTCTGCATATTC  86 58
    AM1_3919 3973257 .. 3973277 +  -4.8  -4.42386   AAGAGAGGTGGGCAG           GAGG-CAAT CTAA ATTGGCCTC            TTTTCTACCTGGAAA  68 474
    AM1_3920 3973767 .. 3973784 +  -3.4  -3.73775   CTCGCAAAAATAAGC             CTTTCC AAACCA GGGAAG              TTTGCTGGAACTAGG  51 289
    AM1_3921 NONE
    AM1_3922 3974652 .. 3974678 +    -5  -2.88999   GGCAGCGTTCATCAA         ACGTCTGAGTAC CGT GGACCCAGACGA         TATCGTCTATGCGGA  49 50
    AM1_3923 NONE
    AM1_3924 3976576 .. 3976586 +    -4  -3.06515   AAGAGATCATCCAGG                 TTGA CTT TCAA                 ATTTTGGACGTAGAG  47 65
    AM1_3927 3979437 .. 3979449 +  -4.1  -3.66646   CAGATTCTCAAACAT                TCCTG AGA TAGGA                TTTGAGTCAAGTATT  54 87
    AM1_3928 3980201 .. 3980231 + -15.6  -3.00525   CCAATCACAGTTTTT       GAAAGCGATCTAGG CAA TCTAGGTCGCTTTC       TATGATTTGGACAAG 100 143
    AM1_3929 NONE
    AM1_3931 3981548 .. 3981563 +  -4.6  -3.17527   CGTCATTTGAGTCAA              CAGTCC CAAC GGTCTG               TATTCCTGATGAGTA  51 31
    AM1_3933 3982351 .. 3982365 +  -2.8  -3.41636   ATTTCGCCATTCACC               TCAGCT TCT AGCTCA               TTCATTAACTTCATT  47 113
    AM1_3936 3983505 .. 3983519 +  -2.8   -4.3739   TACTACTGGAAAACC               CCTTGT TTA ACAATG               TTTTGTAAGGGCATC  59 3
    AM1_3939 NONE
        ahcY 3990541 .. 3990564 + -15.4  -3.66658   CAGACGTGTGCTTTT          CCTCAACCCT TAAT AGGGTTGAGG           TCTTTTAGGGCTCTT 100 48
    AM1_3942 3991524 .. 3991536 +  -7.7  -3.84406   GAGTGGATAGATGTT                TGGTG TAC CACCA                TTGTTGTAATGGAGA  70 59
    AM1_3946 3997282 .. 3997303 +  -3.7  -3.73775   GGAACACTCATCACC           TGGCGATTT TGCC AAGTCACCA            TTTGATCAAACTGAC  53 216
        lexA 3999425 .. 3999452 +  -9.2  -3.08679   AAATCGCTAGACAAG        GCAGAGTGC-TCG TAG CGATGAACTCTGC        TCTTGCGTGAGCGAA  72 262
    AM1_3950 4000590 .. 4000602 +  -3.4  -2.65815   AAGCTAGTAAGGGGG                GGAT AGACC ATCC                TAATGTCGGTCTCAA  42 110
    AM1_3951 4002165 .. 4002206 + -19.8  -3.66844   ATCCCTGGATAGTTG CAGAAATGGTCTTTATCC ATTAAC GGATGAAGACCATTTCTG  TTATTAAGGTATCAG 100 45
    AM1_3955 NONE
    AM1_3956 4008987 .. 4009003 +  -5.9    -3.273   ATCGTCTAAAAAAGA              TTGATCG GCT TGATCAA              TGTTGCCTTTTATCA  57 181
    AM1_3964 4014354 .. 4014367 +  -5.3  -3.59262   GGATTCAGCTCAAGC               GGTTT AGCT AAACC                TTTAAGACTCTAAGG  59 15
    AM1_3969 4019483 .. 4019513 +  -6.8  -3.37612   ATTGGCTTCAATCTA       GGGTAAGCAATCTA CTC TAGAATGCCAACCC       TTCCTTAAGCTTGGC  61 269
    AM1_3973 4023645 .. 4023655 +  -3.2  -3.78775   CTCAGCTCTATAGGT                 CTCT ACC AGGG                 TTTGATCCTGCAGAC  53 207
    AM1_3976 NONE
    AM1_3977 4028179 .. 4028219 + -18.5  -3.05963   CGCTTTAACAGAAGA  CTCTTCTTCGGAGTGGTTA AAA TCGCCACTCTGAAGAAGAG  TCTTACCCTGGCCCT 100 33
        gloA 4030151 .. 4030180 +    -5  -4.18018   CCCTTGGTAATTGCT       GGGTGAAAGCTT AGAGTC AAGCTTCCGCTC        TTTTGAGTCGCAACA  63 51
    AM1_3980 4030512 .. 4030535 +  -4.6  -3.14463   TTATCTTCCAAGCAA          TACAATGCAA AGAT TTGCATGGTG           TTAATGAGAAGCATT  51 111
    AM1_3981 4032407 .. 4032434 + -17.2  -4.52143   CCTTTTAGGCTGAAA        TAAGGCAGTGTG AGAA CACACTGCCTTA         TTTATTGTCTTTAAA 100 60
        rpsD 4034380 .. 4034403 +  -7.5  -5.61596   TAATCTACGAATCAA          CTCCCAAAT CCGTCA GTTTGGGAG           TTTTTTTGTAGACGT 100 77
    AM1_3986 4036393 .. 4036408 +    -9  -2.84587   CCTTCAACCACTCGG              CCACCT CTCC AGGTGG               ATTAGTTTTATCCAG  67 133
    AM1_3988 NONE
    AM1_3989 NONE
    AM1_3990 NONE
        hisZ NONE
        hisG 4040886 .. 4040898 +  -9.1  -2.60496   CTTTAGGTTGTCCCA                CCTGG AAA CCAGG                CTCTTTGCCAAAGGC  63 264
    AM1_3994 4042973 .. 4043013 +  -2.4  -4.77036   TGATGCATAGATTAA TTTGGCCCAGCCC-AGCAG TGTC CAGCAAGGGATGAGCCGAA  TTTTTCGTCATCAGA  66 66
    AM1_3999 4046415 .. 4046441 +  -6.4  -2.76087   CTTTGTTGATCTGCT         CGCTTGCTTTGG CCG CCCGGGCACGCG         CTTTGAGCATCTCTT  54 369
    AM1_4000 4048149 .. 4048163 +  -4.2  -3.83644   AAAATGAGTGGTCTT               CCCAAG TGG CTTGAG               TTCGTTTTTCAATGT  57 102
    AM1_4004 NONE
    AM1_4005 4051515 .. 4051558 +  -9.8  -4.32201   CAGTGATCTGTGAAA TGAGTTGCTGGAGGCTAGGCT ACT AGATTA-CTTTCAGCAACTCA TTTTCAATTAATTCA  93 76
    AM1_4006 4052606 .. 4052628 + -12.2  -2.89564   TCAAATCTATAAATA           TTAGATCCTT TGC AAGGATCTAA           TATCTGAGATAAGAA  83 497
    AM1_4007 4054222 .. 4054254 + -20.1  -2.92293   CTTAGTCGTAGAATA      TCCAAGGGTGCTATT AAC AATGGCACCCTTGGA      TCTAGTGTTGGGATT 100 221
    AM1_4008 4055532 .. 4055542 +  -3.2  -3.94846   AAGTTGTCCGTTCTC                 GCGT TAA ATGC                 TTTAAATTTTCCTGA  55 232
    AM1_4013 4065856 .. 4065894 +  -3.2  -5.12617   AATATCTTTAATAAG   ATAAACCATGATAATTTC TAA GGCATTAGCATGGTTTGG   TTTTTTGGGTGATTC  75 108
    AM1_4014 NONE
    AM1_4015 4067131 .. 4067144 +  -3.1  -2.78869   AAGAGATTTGATCGA               TCTTG TTCG CAGGA                ATTCTACTTTATGAT  43 30
    AM1_4016 4067937 .. 4067965 +  -4.4  -4.88228   CAAAATGCTTACGCA        GCTAGCCTAGCG AAACA CGATTGGCTTGC        TTTTTCGTCTTCACT  71 16
    AM1_4017 NONE
    AM1_4018 4069356 .. 4069368 +  -4.8   -2.8547   AACGATGGGGGTTCT                GGCT TCATT AGCC                TCTAATATAACGACT  47 294
    AM1_4020 NONE
    AM1_4021 4071891 .. 4071904 +  -6.7  -3.63627   GACCAATCAACGTTA               CTCTC AAAA GAGAG                TTTGCCGTCTAAAGA  65 79
    AM1_4022 4072614 .. 4072624 +  -3.2  -3.50572   TCCGGCTGGGTGACC                 TCCA GCA TGGG                 TTGTGTAGAATAGGT  50 211
    AM1_4032 4080680 .. 4080701 +  -5.3  -2.76189   AAAACAGGCAACAAT           GAAAGA-TGT ATT ACACTCTTTC           TCATTCCATGGCTTC  50 125
        ubiH NONE
    AM1_4035 4082419 .. 4082430 +  -5.8  -4.15106   TAGGTTTGAAATTTC                TGCC CTTG GGCA                 TTTTCAAGCTTAATC  68 52
         pex 4085317 .. 4085344 + -13.6  -4.52857   TCCAATTATTAGTTA        TCGGCATTAGAT TTTG GTCTAATGCCGA         TTTTCTATGAGCAGT 100 53
    AM1_4040 4086348 .. 4086367 +  -2.2   -2.7634   GAAAAAGATTAGAAC            TCTATTTT TTAG AAATTAGA             CTTTAAGGTCACGTT  41 226
    AM1_4041 4087175 .. 4087208 + -13.3  -3.60792   CATTGTTAAAGACCT     C-GAAAGAGCCAGACT CAA AGCCTGGCTCTTTCTG     TTTCAGGGTTAGCGG 100 78
    AM1_4042 4088437 .. 4088456 +  -7.9  -2.61144   CTAGTCATAGTAATA            GTTTGGG GACTGA CCCAAAC             GTGTTTAACGAGTCA  60 42
    AM1_4046 4091753 .. 4091763 +  -3.2  -3.07043   GATCAGGCCAGCATT                 TGCT GCT AGCG                 TCTTGCGCTGCTGCG  45 335
    AM1_4049 4093605 .. 4093620 +  -2.6   -4.2717   CGGCAAGAAAAAAAT              TA-GCTG CTC CAGCATA              TTTTGCTGGACTCGT  59 260
    AM1_4053 4095946 .. 4095957 +    -3  -3.45087   TCTTCAGGTAACAAG                TCTT TAGC AAGA                 TCTTCTTCAATTGCT  49 71
    AM1_4058 4108120 .. 4108164 +    -5   -3.6106   ATATGGCTTACAAGC TGCTGACTCGTCTGGC-GTCGG GGT TCGATTGCCTGGTG-GTCGGCA TTTAACAATATTGCA  55 380
    AM1_4062 NONE
    AM1_4063 NONE
         nth NONE
        rpsN 4113157 .. 4113184 +  -5.6  -4.36127   ACAATACTTAAGTCA        CAGCTTCTCT ATAGTTGC AGGGGAGCTG         TTTTGGCTTGTTCAG  70 54
        cysS 4116771 .. 4116782 +  -7.2  -3.26814   GATCCAATGCAGAAT                CGGG TAGC CCCG                 TCTCTTCTGCTTTTC  60 353
    AM1_4072 4120814 .. 4120826 +  -3.3  -3.07755   CTGCAAATCGACGCC                GCTGT AGA ACTGC                ATTTTGCGGGTCTCT  45 338
    AM1_4074 4122641 .. 4122654 +  -2.3  -3.03124   CCCTCAAACCTAAAA               CCTTC TCGC GACGG                TCTTAAGCACTGAGG  42 6
    AM1_4075 4125374 .. 4125385 +  -5.8  -2.56288   CTGCAGAATCGTGAT                TGGC AAAT GCCA                 TCAGTTCACTGCTTT  50 499
    AM1_4078 4127533 .. 4127547 +  -2.8  -4.13767   TGGCACTGAGCATCT               CCATTT TTA AGGTGG               TTTTGAGATGGCGCA  56 214
        rpsP NONE
    AM1_4099 4140339 .. 4140351 +  -6.3  -4.00347   CTGATAGACATAACA                TCAGA ATT TCTGA                TTCGTTTTTGTTTGT  67 99
        phoH 4141615 .. 4141635 +  -9.7  -2.95113   AGCTCAGCTGTCACA            CCATCACCG GGG CGATGATGG            ATTTCCGTTTTCAAG  69 294
    AM1_4103 4142880 .. 4142897 +  -2.1  -3.45592   GGCCAAGGACAACCG             T-GATTAG TTA CTAATCCA             TCTTTGATAAAGCTT  47 23
    AM1_4105 4143487 .. 4143508 +  -2.9  -2.65815   GGGCTGATCAGCTTT           GACCCTATA GTGG TGTGGGGAC            TCGTATGCATGTGAA  41 58
        rnhB 4144126 .. 4144139 +  -5.3  -5.03747   CTTCCAGATTAAGGA               TCTGA GGTA TCAGA                TTTTTTGAGCCATTT  78 29
    AM1_4110 4147166 .. 4147190 + -17.9  -3.74693   AAGCCAAACAAACAA          GGGGCAGCAGC TAA GCTGTTGCCCC          TTTGCTCAGCTCAGG 100 64
    AM1_4111 4147970 .. 4147988 +  -3.8  -3.05935   AATGTCGATTCAGGG             GATAACAC TGT GTGTTGCC             TACTTTGATTCTCTG  46 39
    AM1_4112 NONE
    AM1_4113 4149156 .. 4149175 + -11.4  -5.01042   TAAGCATTATGACTA            GCGCTCGT TATT GCGAGCGC             TTTTTGCTTTCAATT 100 183
    AM1_4114 4150702 .. 4150726 + -17.9  -3.74693   AAGCCAAACAAACAA          GGGGCAGCAGC TAA GCTGTTGCCCC          TTTGCTCAGCTCAGG 100 64
    AM1_4115 4151506 .. 4151524 +  -3.8  -2.98545   GATGTCGATTCAGGG             GATAACAC TGT GTGTTGCC             TACTTATTCTCGGAG  46 39
    AM1_4116 4152208 .. 4152221 +  -6.7   -3.0782   ATCTTGCAGCCACTT               GTGAG AGTG CTCAC                TGTGTTGAGCAGTTA  59 103
    AM1_4117 4152773 .. 4152785 +  -6.3  -3.95036   TCGTTAAACTGAAGA                GATGA ATG TCATC                TTGTTTAAGGTGATT  67 195
    AM1_4118 NONE
    AM1_4119 4154373 .. 4154391 +  -9.6  -2.56095   ACCGCTTCCATAAAG             CCTGATAG AGA CTATCGGG             TACCTTGGCTCTGAG  66 54
    AM1_4121 4156914 .. 4156937 +  -8.2  -3.38272   GTAAAAGGGAGGGGA          GTCCAAGCAT GGCT ATCCTTGGAC           TTATGCATCGTCATC  69 95
    AM1_4123 4159883 .. 4159894 +  -3.6  -3.19602   GCTGCCTCAACCAAT                TGGC TGCT GCCG                 TATTCGTCTCCACCG  46 132
    AM1_4126 4163455 .. 4163470 +  -3.2  -4.87803   CTCTGCTGGGGGTAT              TCACTG ATGA CAGTGC               TTTTATTTGAACGTA  68 94
    AM1_4127 4164302 .. 4164324 +  -9.8  -3.20878   CTTGCAGCTTGTACA           GAGCAGACCT ACT GGGCCTGCTC           TTGCATTAGCTGTTG  74 100
    AM1_4129 4167182 .. 4167194 +  -4.7  -3.73072   GCAAAAATGGCCTGT                CGGTC CTG GTCCG                TTTGCTGGCAGCCTT  57 186
    AM1_4132 NONE
        epsH NONE
    AM1_4134 NONE
    AM1_4135 4172769 .. 4172780 +  -4.4  -3.32769   CGTCAGACTCTCTTC                TGGA ATGT TCCA                 TTGCTCCTTTCGACG  51 166
    AM1_4136 4173970 .. 4173989 +  -4.9  -2.89039   TACGGCTTCTTCTAA            GTAGCGG CGTCTA CCGCTCC             TATGTCAAAATAATT  49 22
         ffh 4175826 .. 4175861 +  -4.7  -2.54098   CTGGGTGAACCCAAC    GCCACTGTCTTCATC TATGGC GAGGAAGATGGTGGA     ATCTTGATTGCGAAA  46 394
    AM1_4140 4177796 .. 4177810 +  -6.4  -3.15861   GTAGAGAGTCCAGCG               CATTCC TAG GGGATG               TTAATAGGCGTACTG  57 17
    AM1_4141 4178999 .. 4179009 +  -2.6  -4.25848   GATGGTCCAAGTTGG                 TATT ACG AATA                 TTTTCCTGAACCGTT  59 420
    AM1_4143 4179894 .. 4179909 +  -3.2  -3.05384   CGCCGAAAATTTGCA              GAGGCT TGAG GGTCTC               TTGAATGGCGAACCA  45 200
    AM1_4145 4181587 .. 4181598 +  -2.2  -4.15565   AAGTTGTTGAGTGGT                CAGT CACA GCTG                 TTTTGAAATACTAAG  55 104
    AM1_4146 4182477 .. 4182491 +  -8.6  -4.04752   TTCCATTGGCGTTTC               CAGCAT CAC ATGCTG               TTTATCCTCTGGTTT  76 322
    AM1_4148 4186300 .. 4186312 +  -7.7  -2.71712   GAGTAGTAAAACACC                TTGGG CTG CCCAA                CTTTGCAGGCAACCG  58 348
    AM1_4156 NONE
    AM1_4157 NONE
    AM1_4158 4192932 .. 4192945 +  -2.3  -2.52676   TTATTGGCCAAGTGT               AGCGA TGAG TCGCC                TCGATTCCCACGATG  39 24
    AM1_4159 NONE
    AM1_4160 4195185 .. 4195197 +  -2.6  -3.56161   CGCTTGTAAGGGGCT                GTGC TGATT GCGC                TTGTATCGTGGCTTG  49 520
    AM1_4162 4196835 .. 4196853 +  -2.4  -2.94199   AGTGGCAAACATATT             CTTGCAAC AGT GTTATAAG             TCTGATTCATCAATG  42 8
    AM1_4163 4197454 .. 4197479 +  -2.5  -4.19371   ACACCTGCTGCTGTA         GGGAGGATGAA GCGC TTCGTCCTAAC          TTTCTTCAACCTTTA  57 404
    AM1_4164 4198688 .. 4198707 +  -3.6  -3.04598   ACTAATGGAGCGTTT            CGGTGAGTG GGA TACT-ACCG            TCTCTCTGGATTTAT  46 64
    AM1_4165 4199317 .. 4199327 +    -4  -3.61398   GCAACAACACCATTG                 TTTG CTA CAAA                 TTGTTCGACAAACCA  54 248
    AM1_4167 NONE
    AM1_4168 NONE
    AM1_4170 NONE
    AM1_4174 4204376 .. 4204386 +    -4  -3.74916   TTGACCCTAGCAATC                 TCTT CGG AAGA                 TTGTACTTTTATCTT  55 329
    AM1_4176 4205546 .. 4205558 +  -4.9  -4.19238   CAAAATTGAAATTTA                TTGAA GTG TTCAA                TTTTGGACTTGAGAA  63 296
    AM1_4179 4208035 .. 4208045 +  -3.2     -2.55   GCCTGTGTCGGCATG                 GACT CTA GGTC                 TAAATTAAGGTGTTG  42 135
    AM1_4180 NONE
    AM1_4181 4209295 .. 4209320 +  -8.3  -3.62354   TAGTTAGGACGAGCT         GGACGGGTA GGAAAAAA TGCCCGTCC          TCTTTCGTTTACAGG  73 106
    AM1_4182 NONE
    AM1_4183 4210813 .. 4210824 +  -3.6  -4.07877   TAGGTGCATTCTATT                GGCG TTAT TGCC                 TTATTTATCCAATAA  60 170
    AM1_4184 4211573 .. 4211606 +  -3.1   -3.6502   GTAACACTAAATGAC     GAGCCCCTTCAATCA CCGC TAATTGTAGGGCTTC      TTTAGATCCAAAATG  51 484
    AM1_4186 NONE
    AM1_4187 4213374 .. 4213404 +  -5.4  -3.99592   ACGCCTTACATGAAA       GTAAACACTGCTCC AGA GAAGCCGTATTTAC       TTTCTAGTCCTAGAT  63 500
    AM1_4190 4216647 .. 4216659 +  -4.9  -3.33696   ATCCACTGCACATAC                TTGAA GGA TTCAA                TTCATTCACAACCCC  53 130
    AM1_4191 NONE
    AM1_4192 4218440 .. 4218453 +  -3.9  -3.86015   AGTATACTCTAGACG               GTTAA GAGA TTAAC                TTTCTGGAAAGACTG  56 218
    AM1_4201 4225290 .. 4225310 +  -2.5  -5.00616   TAACAAGATAAATAC            TCGCACGGT TCA ATAGTGTGA            TTTTTTGGAGGCAAG  70 124
    AM1_4202 NONE
    AM1_4203 NONE
    AM1_4204 NONE
    AM1_4205 4226927 .. 4226943 +  -3.7  -3.90316   GAATTGGATAGGTAA              GCTAG CAACAAT CTAGC              TGTTTTTAGCCAACT  56 67
    AM1_4206 4227421 .. 4227437 +  -2.3  -3.24755   GAGCAGTGGTGTTTT              TCTAC TGTAGGC GTAGA              CTTTGTTTGGCGGAT  45 43
    AM1_4207 4228469 .. 4228485 +  -6.5  -4.07877   CAATATGGGCGTAAT              CTCCCTT ACC AAGGGTG              TTATTTCTGCCGTCA  68 414
    AM1_4210 4232992 .. 4233003 +  -2.2   -4.1899   ATGGACCAATTCCGC                GTCT TTGA GGAC                 TTTTAAATGGAATGA  57 471
    AM1_4214 4236627 .. 4236645 +  -6.6  -3.45023   TAAAACAAATACCGT             TGACCCCC GAT GGGAGTCG             TTCTCCTCCTGATCC  61 367
    AM1_4219 4241603 .. 4241618 +  -2.6  -3.78556   AAGCATATTAGGGTG              TAAAGG TGAA TCTTTA               TTGTTAGATTCTTAT  52 128
    AM1_4220 4242593 .. 4242605 +  -3.3  -3.93963   AGGAAGATACGGGCG                ATGCC TAG GGCAA                TTTGTGGGTGATGGT  55 294
    AM1_4225 4246503 .. 4246517 +    -5  -3.31641   ATAGAACTCTCAATC               TCCTAT ACA GTAGGA               CTTTTACTCTTTGTT  53 37
    AM1_4226 NONE
    AM1_4228 NONE
    AM1_4229 4249684 .. 4249726 +    -7  -2.70003   TGCTGAAGAAATTTG TAGCTTATTCTGACAACGCT CTC AGAGTAGTCAGTATAAGCAG ATCTTCTTATACTGC  56 248
    AM1_4231 4251968 .. 4251981 +  -3.9  -3.86015   GCTATACTCTAGACG               GTTAA GAGA TTAAC                TTTCTGGAAAGACTG  56 55
        argG NONE
    AM1_4236 NONE
    AM1_4237 NONE
    AM1_4238 NONE
    AM1_4239 4258918 .. 4258928 +  -3.2  -4.07246   AATAGGAGTTAAGTG                 CGTT CAG GACG                 TTTGGTTTCCCATGG  56 72
    AM1_4240 NONE
    AM1_4241 NONE
    AM1_4242 NONE
    AM1_4244 4262989 .. 4263006 +  -2.1  -2.67803   ATAGAAAATACTGAT             TTTATTG AGGT TAATAAA              TAACTTTCCTAAAGG  40 5
    AM1_4250 4268853 .. 4268868 +  -2.6  -2.60988   GTGCCTAATACTGGT              CGTTCTA ACT TAGA-CG              TGGATTAATTGAGTT  41 33
    AM1_4251 4269798 .. 4269818 +  -8.3  -2.87229   GAATTTTGTTATTTC            GATTGCAGA AAA TCTGCAACC            ATTTGCTGATGGACT  64 46
    AM1_4252 NONE
    AM1_4253 4271102 .. 4271118 +  -5.1  -2.69649   TTGAACAGCCGAGAG              GCGAAAG AAT CTTTGGC              ATTATCTACACCTAT  49 62
    AM1_4254 NONE
    AM1_4255 4275257 .. 4275273 +    -3  -2.75284   ACTAACTGCCCCCCA             TTCTGCC TATG GGC-GAA              TCAATTTGTGATTTT  43 368
    AM1_4256 NONE
    AM1_4257 NONE
    AM1_4258 4278163 .. 4278173 +  -4.6  -4.63218   ATAAACAGAGAAGAT                 GGGG AGT CCTC                 TTTTGTTAAAGAAGA  71 437
    AM1_4260 4279046 .. 4279059 +  -4.5  -3.00629   GCGAGGAAACTTGAA               TGTCC AGAG GGGCA                CTTTATAAATTGTTA  50 248
    AM1_4264 4282467 .. 4282481 +  -7.2   -3.2963   AGAGGCGCGTTCCTA               CCTTTT CAG AAAAGG               TTATCCCCCAGTAGT  64 521
    AM1_4266 4283470 .. 4283485 +  -2.6  -3.33151   CTATCAAATATAGAT              TTCAGCC ATA GG-TGAA              TCTTCGTTTACACCG  46 117
    AM1_4268 4287736 .. 4287764 +  -8.9  -3.55444   TGAGTCTTTGCAGTA        TCCCCAGCTTATT AGG AATGGGCTGAGGA        TTTAGAAGATGACGC  73 520
         pgi 4292755 .. 4292778 + -12.4  -5.54338   AAATAACCGCATCAA          CGGGCCTCTG CATA CAGAGACCCG           TTTTTATTTTGGTTG 100 54
    AM1_4273 4294097 .. 4294111 +  -2.8  -4.14739   ATCAGTTCATACTGG               CCAATT TGT AATGGG               TTTTGGGCTAGCTGC  59 318
    AM1_4275 NONE
    AM1_4276 4296420 .. 4296432 +  -2.7  -4.92812   ATTTATTCCATATTT                TGTTG TTA TAACA                TTTATTTTATTGTCA  70 348
    AM1_4278 4296825 .. 4296837 +  -5.5  -3.48288   GAGTGATAGTAAGGT                GGTGA GTT TCGCC                TTATGCTCTCCATTA  56 79
    AM1_4279 NONE
    AM1_4280 NONE
    AM1_4282 4302346 .. 4302359 +  -6.7  -2.72745   TGCGCTTGAGAAATA               CGCTA AAAA TAGCG                CTATTTGTAAGTCGG  56 71
    AM1_4285 4307142 .. 4307165 +  -7.5  -3.21395   CGAAATCCGTATAGG          GCAAAGCCA ATCGAC TGGTTTTGC           TGTTCTGCGAACAGT  60 307
    AM1_4289 4309800 .. 4309823 +  -6.7  -2.53715   AACAGCGCAAAAAAA          GGGTAGACC CGACTC GATCTACCC           CTTGCTCCTACTCAG  55 89
        cdsA 4311427 .. 4311438 +  -3.6  -3.21276   CGAGTAGGGATTGGA                TGCC GCCT GGCG                 TATTGTAAGCAGCAA  46 330
    AM1_4293 4313100 .. 4313113 +  -2.5  -3.86421   GATGTAAAATAACTA               TTTTT ATTC AAAAA                TCTTTATATTTTCTT  52 224
    AM1_4296 4318391 .. 4318421 + -12.6  -4.65263   GATTGTCTGAACAGA       CTGGTAGGCTTAGC TTT GCTAAGCCTACCTC       TTTCTTTTGCAACCT 100 373
    AM1_4303 4322667 .. 4322678 +  -3.6  -4.20354   TCAAATTATAGAGAG                CCTG TAGC CGGG                 TTTTCGCGTTCAGTT  60 73
    AM1_4305 4326577 .. 4326587 +  -3.2   -5.1287   GACCGATTCAGTGTA                 TTGC CCC GCAG                 TTTTTTGAATGTAGG  75 63
    AM1_4306 4327491 .. 4327504 +  -3.1  -3.21595   ATCCGATCCATCCTG               TGTTG TCAT CAGCA                TTAATCGTGAGAGTT  46 60
    AM1_4314 4337036 .. 4337049 +  -4.5   -4.2828   TGAACTGCTTTTCTA               GG-GCG TTA CGCACC               TTTTGGTGGATGGGG  64 57
    AM1_4315 NONE
    AM1_4316 4340556 .. 4340576 +  -3.9  -3.19889   GGCTCAGAGTATAAC            TGTCCTCGA TGT TCCAGGACC            TTCGATGTCTTGCTG  48 321
    AM1_4317 4341057 .. 4341070 +  -3.8  -3.83744   TAAGCTCTGGTGAGC               TGGG AAAGGC CCCA                TATTTATTTAGGTGC  56 158
    AM1_4318 NONE
    AM1_4319 4344079 .. 4344101 +  -9.2  -4.07568   CAATAAATTAGGAAA           TCATGCAAAC AGA GTTAGCATGA           TTTTGAACGGGCGAA  83 35
    AM1_4320 4345625 .. 4345640 +  -6.2  -2.76162   GTTTCTAATGTAGCG              CTTCAT GAGC ATGAAG               ATTTCACATCCGATG  55 114
    AM1_4321 4347062 .. 4347079 +  -4.1  -3.65046   TTATTTGGGGCAAGA             CACAATG GAAG CATTGCG              TTGTTACCCTAGCGC  54 85
    AM1_4322 4348471 .. 4348481 +  -2.4  -2.65298   AGAATAATCCTGGCT                 CGGC CCA GCGG                 GTTGTGCTAGATCAC  40 34
    AM1_4323 4350118 .. 4350130 +  -2.6  -3.24137   GCTACCCTAGAGATC                TCGC GAGGA GCGG                TATTCTCCAGTCATT  46 167
    AM1_4324 4352067 .. 4352079 +  -3.3  -4.58395   CCCGGACACTAAATA                TTCCC CTT GGGCA                TTTTTACCCACTAAA  66 461
    AM1_4326 4353958 .. 4353982 +  -8.7  -5.63103   AATTAATGAGTGCTT          TCAGAGTTTTC TAA GAAAACTCTAA          TTTTTTTCCTTAGAA 100 451
         pex 4354531 .. 4354558 + -14.2   -3.1978   GATTGAATGAGCTTT        CGGCTGGAACTT ACCT GGGTTCCAGCCG         TCTTAATATCAACGT 100 56
    AM1_4328 NONE
        hemK NONE
    AM1_4330 NONE
         ald 4358060 .. 4358074 +  -4.2  -2.90212   AGGGAAGTCTTGAGT               GGTTGG GCG CGAACC               TATGTCCCATGCTGG  46 77
    AM1_4332 NONE
    AM1_4333 4359783 .. 4359794 +    -3  -3.31792   GAATAAAATCCTGAT                TTTG GCTT CAAA                 TTCTAAGAATACTCA  47 132
    AM1_4334 4360154 .. 4360212 + -31.4  -2.51849   CTTGTAATTTGTAGG -C--CATCACCCCCCGGCCCCCTCTCCCA ATTT TGGGAGAGGGGGCCGGGGGGTGATGCTGA GATTTTCAGTTGTTC 100 27
    AM1_4335 4360966 .. 4360988 +  -4.8  -3.17763   TTGGGCGAGGGGGAG           GAATTCAGCG TAT CGGTGACTTC           TTGCTCCCCTCTCCC  51 309
    AM1_4338 NONE
    AM1_4340 4366606 .. 4366627 +  -2.9  -3.06796   ATGCCATTGCTTAGG           CTTGGCCAA ACGA TAGGCCAAC            TTGACTCGGATCAGA  43 27
    AM1_4342 4369631 .. 4369644 +  -3.1   -3.6682   GCCGTAGGTGAGTCC               TTTGC GATC GCGAA                TTTCAGTACCTAAAC  51 424
    AM1_4343 4373823 .. 4373833 +  -3.2  -3.61486   AGGAATCTCTATCAA                 TCTG GTG CGGA                 TTATCATGTTTTGCT  51 79
    AM1_4344 NONE
    AM1_4345 NONE
    AM1_4346 4375180 .. 4375215 + -12.7  -5.14563   ATAGAAGTTGCCCTA    CTCCCTGCTACCTAA TAAATC TTGGGTAGCAGGGAA     TTTTTTGGTACGCCA 100 52
        pntA 4377608 .. 4377622 +  -4.2  -3.61506   GTCCTCAACTGGCTA               GGACAG CGA CTATCC               CTTTTTTAGGAGTCC  54 73
        pntB 4379093 .. 4379127 +  -9.4  -5.64274   AATATTCTGCCTAAA     GTAGAGAATGCCTGTT TCT ATTAGGTGTTCTCTAC     TTTTTTTATGGATAA 100 53
    AM1_4349 4379927 .. 4379937 +    -4  -3.36762   TGATGAGGCTTAGGC                 GTTA GTC TAAC                 TCTTCTGTGATCTGT  51 21
        cpmA NONE
    AM1_4351 4381784 .. 4381810 +  -6.7  -3.55622   GCTCATGAGGTTTGG        TAGCAAGTGTGGG TCA CCC-CACT-GCTA        TTTAAGAAGGTTACA  63 473
    AM1_4353 NONE
    AM1_4355 4384563 .. 4384583 +  -4.6   -5.4505   TTCAATGGCGCCAGG            CTCTCCCA TAAGT TGGGCGGG            TTTTTTATTGACGGC  85 82
        ftsH NONE
    AM1_4365 4396144 .. 4396165 +  -2.3  -4.07568   GTTTTACCCTCTTTT           TCAGGTTGTC TAT GACCA-CTGA           TTTTCCCCAGCCGCC  53 43
        cysG NONE
        pyrF 4397699 .. 4397754 +  -4.8  -2.72344   CTGTACCGATTTAGT TAGCGCTTGATAGCAAAAACG-GCTGG CTT CTATCGTGTTTTAGCTGTCAAGCGTCG TCATTACCGATCGGA  48 16
        radC 4398721 .. 4398732 +  -2.2  -3.13177   ATATGATGATTGAGG                GTCA CTAC TGGC                 TTGACTATAGACTAT  43 126
        gapA 4399827 .. 4399852 + -11.9  -4.17296   ATGATTCAAATAAAA         CCCCTCATCTG GAAA TAGGTGAGGGG          TTTCTATGTGTAGCA 100 75
    AM1_4372 4402256 .. 4402284 + -18.3  -2.74886   TTGCATAATCCTAAG        GAAAGGGGTGAGT TGA GCTCACCCCTTTC        TGCTGTCTATAATTT 100 81
    AM1_4373 4404158 .. 4404175 +  -4.8  -3.91897   TTATCGTTGCATTCC             CGGTGC AAAAGA GTACCG              TTTCTAACTCAGCAA  59 132
    AM1_4379 NONE
    AM1_4380 4411143 .. 4411162 +    -5  -3.33509   CTAAGGGGTAGCGGC            GGAATTGA GCCG TCAAATCC             TTAAATTGTTTCCCC  53 110
    AM1_4381 NONE
    AM1_4382 4413972 .. 4414016 +  -7.4  -2.60496   TCGCTTTCGTTGACC GTTATCCCTGA-TGCTTGG CTGGAATA CTAGGTACTCAGGGATAAC CTGTTTAACGGGACA  58 52
    AM1_4383 4415752 .. 4415762 +  -2.4    -3.695   GCAAATCGCTGTAGG                 GGGC TGA GGCC                 TTTCCACTGTTTGAG  50 121
    AM1_4388 NONE
        tpiA NONE
    AM1_4390 4420711 .. 4420733 +  -3.3  -3.68341   CGGCTGAGATCTATT           GCAGTTGCT CTTCA AGCTTCTGC           TTATTCCATAAAGTT  51 59
    AM1_4392 4423476 .. 4423520 + -10.2  -4.82901   AGGTTCTAAACCGAC TGAATCAATAACCCAGCAGA ACCAC TCTGCTGGGTTATTTGTCTA TTTTTCTAAACGAAC 100 65
    AM1_4398 NONE
    AM1_4399 4427707 .. 4427718 +  -4.4  -4.11394   GTTGAGACCATCGGA                TGTG AATT CACA                 TTTTCCCGATCCAGT  61 433
    AM1_4401 NONE
    AM1_4402 NONE
    AM1_4403 NONE
    AM1_4404 4432680 .. 4432691 +    -3  -4.74504   CTAGAGAAACCGTAA                TTAC TGAT GTAA                 TTTTTGCATTGAAGT  65 79
    AM1_4405 4432998 .. 4433030 +  -5.1  -3.05844   AAATAAATTTCAAGA      TCTTAAAAGAG GTACTTGATTG CTCTTTTAAGA      TCTTGAAATAGAAAG  52 39
    AM1_4406 4434395 .. 4434411 +  -6.5  -3.40899   GGACATCTCTTATTT              GAGGCGT CAT GTGCCTC              TTGTCATGAGGGGTT  61 213
    AM1_4409 4436340 .. 4436350 +  -5.4  -2.75183   ATCATGATCAATATT                 CCTT TGG AAGG                 TGCTTAGGTCGCAAT  50 8
    AM1_4410 4437579 .. 4437590 +  -5.8  -3.61398   GGTGGTTCCACCACC                GGGA ACAA TCCC                 TTCTTCAACAGCCGC  59 499
    AM1_4414 4440501 .. 4440513 +  -5.5  -3.08642   TTTTGGCCTGTTCTA                GTGCG TTT TGCAC                TTGAGTGAATCCTGT  51 112
    AM1_4424 4450173 .. 4450207 + -21.7  -3.17075   CATCACAATATGCAA     TACCCCCCTTTTCTC AGGTA GAGAAAAGGGGGGTA     TTGCATTAAACCCAG 100 43
        cbiD NONE
        guaA NONE
    AM1_4429 4454642 .. 4454652 +  -3.2  -3.15841   ACATATCGCACAGCA                 GGGT CGC ATCC                 TCTTCATGGCCTTCT  46 381
        cobN 4461083 .. 4461107 +  -3.6  -3.37537   ACAGACCATCCACTA          GATATTGCAT GCAAA GTGCAAAATC          TTCGCTTTTGCGATG  48 473
    AM1_4441 NONE
    AM1_4442 4470843 .. 4470854 +  -5.8  -2.87026   CATTCTGGTCAAAAA                GGGT AGGG ACCC                 TCTGCTATGGATCTG  53 20
    AM1_4443 4471510 .. 4471523 +  -3.7  -3.11366   GTTGGGACGACCGCC               GCCGC CGCC GCCGC                ATTGTTTTGCGATCG  46 148
    AM1_4445 4475294 .. 4475319 +  -3.3  -4.21275   TAGCTCTAAATTTTC         TCTCAGGAATT TGAA AGTATCTGAGA          TTTTAAGTCGATTCC  58 396
    AM1_4447 4478416 .. 4478426 +  -6.8  -2.56124   AGTTGCGGGTATAGT                 CCAG TCT CTGG                 CTCTCTTTCCCTAGC  55 27
    AM1_4451 4482237 .. 4482248 +  -5.8  -3.47078   AGGACCTCTGAATGG                CTGC TGGA GCAG                 TTCTAGTCTCGACTA  59 8
    AM1_4453 4483648 .. 4483669 +    -3  -2.93045   TTTGTAACGACTGCA           TTAGGTCA AATCCA TGACCAAA            GTTTCATCTCTCCCT  44 95
    AM1_4454 4484846 .. 4484867 +  -4.3  -3.12402   TTGCCGTGGGATCCA           CACGCCCTT GAGC GGGGGCATG            TTGAATAATCATTTC  48 461
    AM1_4457 4486341 .. 4486352 +  -2.2  -2.67803   CAAAGGATTTAGCAA                TCCA CTTT TGGG                 TGAGTTTACTGAAAG  40 29
        thyX NONE
    AM1_4459 4488425 .. 4488441 +  -8.7  -3.30243   ATAGCTATAAAAAAA              GCTAGCG ATT TGCTAGC              TTCTACAGAATCAGT  71 37
    AM1_4464 4493392 .. 4493425 +  -3.9  -2.77013   GGTGGAGAATATCTA     TCGTGAATAGTTGGA AATA TCTAACAGTTCGTGA      GTTCTTAGAAGGATA  45 20
    AM1_4465 NONE
    AM1_4466 NONE
    AM1_4467 NONE
    AM1_4468 NONE
        apcA 4495932 .. 4495944 +  -4.8  -2.84234   TGATGCCTGCGCTCC                GCCT CAATC AGGC                CTTATTAAATTAATC  49 0
    AM1_4470 4497046 .. 4497083 + -11.3  -3.01924   TTATCTCTAAACATC   CATTGCCCGTAGCGCTG ATTT TACTGCTGCGGGCAGTG    TGTTGAGCAACCCTC  83 52
    AM1_4476 4502673 .. 4502687 +  -4.2  -2.54193   CATCAACTGACCTTA               TGGCCT GTC ACGCCA               TACCTTCGGGTCGTA  45 51
    AM1_4479 4507665 .. 4507675 +  -3.2  -3.67775   ACCCTCTACTTGTAG                 GCTT CTT AGGC                 TTCTTAAATAAAAAT  51 243
    AM1_4481 NONE
    AM1_4482 4512727 .. 4512742 +  -6.8  -4.87626   TGGATTTTACGACTT              GCGACT TTGA GGTCGC               TTTTTGATATTCGGG  83 472
    AM1_4488 NONE
        epsH 4519325 .. 4519337 +  -3.3  -3.18738   TCCTCAGTTTGCCGA                CTCGC CAA GGGAG                GTTTTCATCATGATC  46 0
    AM1_4490 4520303 .. 4520315 +  -7.7  -4.09685   CAGCCACTGTGCGAT                CGCAA TCT TTGCG                TTTTAGCGGATAACC  76 301
    AM1_4492 4521408 .. 4521428 +  -9.7  -2.93684   AACTTGCTGTATTGA            TCGGTGCCA TTC TGGCACCCA            GTTGATTTTTATCTA  73 44
         tag 4522998 .. 4523011 +  -2.3  -4.00042   ACAAATGTTGAGAAT               GGGCA AATT TGCAC                TTATTTACTAGAAAA  53 89
    AM1_4496 4524526 .. 4524536 +  -5.4  -2.65938   CTTGCTTCTGCCAGG                 GACA GGT TGTC                 ATGTTCTGGTTTTTC  48 182
        gyrB NONE
    AM1_4500 4528544 .. 4528560 +  -7.3  -4.42639   TCCTGTGCAGTCAAC              CGTTTCT TTT AGAGACG              TTTTAATTGCCCTAT  78 14
    AM1_4504 4532327 .. 4532371 +   -13  -2.69649   CTTTTACTCTCACTT TCCCCCATGCCCCAGAAGACT GATC AG-CTTTTGAGGTATGGGGGG GTTATCTCAGAATGT  91 84
        yciH 4534357 .. 4534367 +  -6.8  -3.36968   GGAATCAGAAACATT                 GAGG TAT CCTC                 TTCTGCCCTTAAATG  61 74
    AM1_4513 NONE
    AM1_4514 4541207 .. 4541228 +  -2.9  -2.81547   TAATGGCCTCTCCCA           GCTCATACC AACG GGTTTCAGC            TACTTCATCTACGGC  42 142
    AM1_4516 NONE
        xylB NONE
    AM1_4518 4545200 .. 4545216 +  -6.5  -2.58579   ACCCACCGTCATCAG              TGACAGC ACA GCTGCCA              ATTCTCCAAAATTCC  53 181
    AM1_4520 NONE
    AM1_4521 NONE
    AM1_4522 4549986 .. 4549996 +  -6.8  -3.89041   TAAATCAAAATTATG                 GCCT ATT AGGC                 TTATATTTAGTCTCT  67 241
    AM1_4530 4558099 .. 4558127 +  -8.1  -2.76263   CAGCAAAAGCGAAAG        TATCCGCATCGGC TCC GCCAGTGAGGATA        TCGTTACCTGCTCCC  59 455
    AM1_4532 4565686 .. 4565697 +    -3  -3.53563   TAGTATGGACAACTA                GATA TGTA TATC                 TTTCACGGAGAGTAT  49 110
    AM1_4534 4566460 .. 4566474 +  -6.4  -3.82083   CATAAATTCCAGATA               TCCCTG GTT TAGGGA               TTTAGCTTGTCCTGC  65 170
    AM1_4539 NONE
    AM1_4540 NONE
        ubiA 4577363 .. 4577381 +  -7.4  -2.52676   GATAGGCATCACTCA             GATTAGCG CCT CGCAAATC             TGCATTGGCCAAATC  56 224
    AM1_4543 4579769 .. 4579782 +  -5.3  -4.22338   TGCAATATAAAGATT               GTCAT AGCT ATGAC                TTTTGAGATTCTCAT  66 336
    AM1_4547 4584886 .. 4584901 +  -3.2  -3.53444   GTTGCCCCTGGTCGT              CCGC AGGCGATA GCGG               TTTCCCAAACACTAG  50 307
    AM1_4549 4586431 .. 4586441 +  -5.4  -2.53263   CAGCCTCCCAAATTA                 CGTT TTC AACG                 TCAATTCAAGATCGG  49 238
        hppD 4587614 .. 4587626 +  -3.3  -3.18582   TCCGTCTGACTATTA                TGCCC GGT GGACA                TTGCTCGATACACTG  46 103
    AM1_4553 4588415 .. 4588429 +  -5.7  -4.27617   AGCAATCATACTGGT               GGGAT CGGCA ATCCC               TTTTCCTGCGATATC  69 403
    AM1_4562 4596293 .. 4596307 +    -5  -2.95896   CGATCATAAAAACTG               GTAAAC CCC GTTTGC               GTTTGTAGCTGCTGA  49 516
         sat 4598807 .. 4598817 +  -6.8  -4.11692   CCATTATCTAGTAGT                 GGGT TCT ACCC                 TTTTGCCCATCCGTA  71 81
    AM1_4565 4601178 .. 4601198 +  -3.2  -5.00884   GCATGAGGAGTATGA            GTGGTGAG GCCAG CTCACCGA            TTTTTTAAAGCAACT  71 43
         dtd NONE
        glmS 4605296 .. 4605312 +  -6.5  -2.62396   GACGCTGTGGGGCGA              GTGTAGC GAT GCTTCAC              TCCTATAGGGAAATA  54 54
    AM1_4578 NONE
    AM1_4579 4616836 .. 4616851 +  -7.6   -3.3447   GTTAATCGCTCCATT              CACTTG TCAC CAAGTG               TTCCGTTTGATTGTG  66 52
    AM1_4580 4617238 .. 4617254 +  -2.3  -4.21989   ATCCATGCCTGTGTA              TTAACCA TGT TCGTTAA              TTTGTTGCCATTGTA  55 157
         lgt NONE
        cobM 4619236 .. 4619254 +  -3.2  -4.20769   AGATTCAAAGAAGTT             TCTTCA CAAAAAC TGAAGA             TTTGTGTTGACATCT  58 309
         hli 4619467 .. 4619488 +  -4.5  -4.77567   GGCGTTTTGCACTTC           TGG-GGCTTA ATG TAAGCTGCCA           TTTTGTTATCGACCT  74 11
         hli 4619858 .. 4619875 +  -8.4  -5.21709   TCACTCTCATCCAGA             CCCAGC CATTGC GCTGGG              TTTTTTACTATCCAC 100 188
         hli 4620254 .. 4620272 + -11.7  -3.88029   TTCCTTGTCTTTTAG             CCCCAGC TTCTC GCTGGGG             TCTTTTATATCCACT  95 93
        rpoD 4621379 .. 4621403 +  -7.2  -3.95584   GCAAATCGTATTTCA         TACCCCGTCTG CTTG CAG-TGGGGTA          TTTGATTCATGCCGG  69 140
    AM1_4588 NONE
    AM1_4589 NONE
        ftsH 4624298 .. 4624334 + -21.1  -3.69734   GGTTGAAATCCCTAA    GCAAAAGCCCTCCAC TGAAAAT GTGGAGGGCTTTTGC    TTTAGATGGATTATT 100 45
    AM1_4592 NONE
        pdxH NONE
    AM1_4598 NONE
    AM1_4599 NONE
    AM1_4600 4634823 .. 4634838 +  -2.6  -5.38839   GTTGTAAACTTAAAC              TTTCTT TGTA AAGAAG               TTTTGTTTTTGTCTG  76 215
    AM1_4601 NONE
    AM1_4602 4635798 .. 4635818 + -12.6  -3.26444   TTTAGTTAGTTCCTT            GGGGCAAC ACATC GTTGCCCC            TCTGTTATTCAGGAG  95 46
    AM1_4603 4636707 .. 4636728 +  -3.1  -3.39668   CAAAAGCAATATGAA           CAACAAA TTTTATGT TTTGTTG            TTATGGAGTTTGAGC  47 164
    AM1_4604 NONE
    AM1_4605 4638039 .. 4638056 +  -3.3  -3.66908   ACTTAATGGTGTAGC             CAGGGCC ACCC GTTCCTG              TTCCTTTTGGGCAAC  53 273
    AM1_4607 NONE
    AM1_4608 NONE
    AM1_4611 NONE
    AM1_4612 4646018 .. 4646038 +    -4  -3.43689   GTCTGCCAAGAGCCA            TAGCCTCT AAGCC ATAGGCTA            TTATGGTGCGGTTTT  52 23
    AM1_4622 4656911 .. 4656928 +  -2.7  -3.06492   TCGCAATGACAGGCT             CTTTAGA ACCG TCTTAAG              TCTTCCCCTCGCTAC  43 9
        cyoE 4657942 .. 4657956 +  -5.6  -2.61452   ACTCATATCCTTCAA               GCTTGG ATA CCCAGC               ATTGGTTGAAGTCAT  52 2
    AM1_4624 4659296 .. 4659312 +  -2.2  -3.22789   GATCGCAAAAAAGAA              CGCAAA GAAAA TATGCG              TTAACTTCCTATCGT  43 5
    AM1_4625 4660574 .. 4660593 +  -6.4  -4.00934   TACAACCGTTGGTAT            GGCGATCT TGCA AGGTTGCC             TTTGATGTTTAAAGT  67 313
    AM1_4628 4663340 .. 4663350 +  -2.4  -2.62386   AGCGAACCCCAGAAA                 CCCG ATC CGAG                 CTATCTTTCCTTTCC  40 505
    AM1_4632 NONE
        deoC 4667034 .. 4667047 +  -4.5  -2.86164   TTTGGATCAAGGCAA               GCG-GG TGT CCACGC               TATCCTGCTTCCCCC  49 71
        recO NONE
    AM1_4635 NONE
    AM1_4636 4671112 .. 4671125 +  -2.4  -3.22091   TCCCCACATGAAGCG               TCAG ATGCGC CTGA                TTAATACCTTCAGAT  43 494
    AM1_4638 4672558 .. 4672574 +  -9.4  -3.22476   CAAAGCTCAAAGTAA              GGCCCT CTGAA AGGGCC              TTCATGGTGCATCCT  72 243
    AM1_4639 4673785 .. 4673828 + -14.9  -2.57013   GTGCTTGCTATCCCA TCTCTGAGGGAATCAATCTC TTTAT GA-ACTGATTCCCTCAGAGA TGCATTAAATTCAGC 100 122
    AM1_4641 4674998 .. 4675008 +  -3.2  -2.90194   AAGATGGGGATAAAT                 CCAG GCA TTGG                 TCTCATTGAGCCAGT  43 343
    AM1_4643 4678181 .. 4678199 +  -7.5  -3.72695   CTAATTCTAATGAAG             TTTGAGC ATCGG GCTCAAA             TTTGATACGACGGAT  67 227
        murG 4682479 .. 4682497 +  -7.4  -2.55361   ATAGGTAACGTATCG             CTAGAAGC CCA GCGTCTAG             ATCATTTTTAGGTGG  58 46
    AM1_4654 4689418 .. 4689447 +  -2.8  -3.95073   ACAAGCTGTTGAGCA       CATG-CTGCACCC CTAAT GAGAGCAGGCATG       TTTCTAGATCTGGAA  54 369
        rpoE NONE
    AM1_4656 NONE
    AM1_4658 4693490 .. 4693507 +  -6.3  -3.25823   AGAACAATTCCGCCG             CCT-GTGG CCA CCACGAGG             TTGGTGTGAGCAGCC  57 310
        miaB 4696495 .. 4696506 +  -3.6  -3.07935   AACCACTATCATCTG                TGGC AACT GCCG                 TTCGCTAGGTGAAGT  48 6
    AM1_4667 NONE
    AM1_4668 NONE
    AM1_4669 4704374 .. 4704397 + -13.2  -4.61482   AGACTTGATAGATTT          GTGAGGCTGT AAAT GCAGCCTCAC           TTGTTTTTTGGGGCC 100 74
        ham1 4706222 .. 4706236 +  -2.8  -3.57462   TTCTTTGTTGGCAAT               GACC TTGGGCT GGTC               TTTGGCCATCGCATC  49 388
    AM1_4675 4708126 .. 4708139 +  -3.8  -2.68653   TAAAACAATGGCCAA               GGCT AAATTG AGCC                CTTCCTTGATATTTT  44 418
    AM1_4678 4711581 .. 4711601 +  -2.5  -2.93901   CCGTAGTGGTGTGAT            TGCTTTCGA GGG TCGGGAGGA            TCTGCTTACTCAACT  43 106
    AM1_4679 NONE
    AM1_4680 4714296 .. 4714311 +  -7.5  -4.08706   GTGATTGAAATTTGA              CCGCC ATCAAA GGCGG               TTTATATCATCCGCA  73 26
    AM1_4682 4715427 .. 4715447 +    -4  -2.71765   AGTAGATGAGCATAG            TCAATGGC AGTTC GTCGTTGA            GTTACTTTCACATAT  45 396
    AM1_4684 4716867 .. 4716877 +  -2.4  -3.79747   GTAGAACCTGTTAGT                 TGCG ACC CGCC                 TTTCATAGTGGATGG  52 468
    AM1_4686 NONE
    AM1_4687 4721725 .. 4721739 +  -3.5  -4.18018   AAATCAGCAGCAGCG              GCAGCC TCTA GGC-GC               TTTTCAATCACGGAC  60 345
    AM1_4689 4724434 .. 4724447 +  -2.3  -3.27022   ATAGTCCATGTTTTT               GGCTG ACTG CATCC                TTACTGTAGGCTAGC  45 199
    AM1_4690 4725102 .. 4725126 +  -7.8  -3.19293   CAGCCCCAAAACAAA          GCGATAGGGA AGTCC TCCCTGGCGC          TTAGATATTGAAGTT  63 83
    AM1_4691 NONE
    AM1_4692 NONE
    AM1_4693 NONE
    AM1_4694 NONE
    AM1_4695 4729170 .. 4729181 +  -4.4  -3.84185   AATTTTTTTGTGTTA                TAGG GTTC CCTA                 TTGTGTTTAGGTAAG  57 338
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN 4734522 .. 4734534 +  -6.9  -2.80816   AAAATTGTTTCTCTC                GCGCC AGA GGTGC                TCTAATGGCTAAGAA  57 8
        rplX NONE
        rplE NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rplO 4737891 .. 4737904 +  -3.1  -3.11218   GGGCCGGTGGTAGCT               TTCAG TCTA CTGAG                TCTTAACATCTTTCA  46 6
        secY NONE
         adk NONE
        infA 4740166 .. 4740179 +  -6.7  -3.99228   TCAAGATGCATTTGA               GTTGC GATC GCAAC                TTTATCCATTGCTAT  69 64
    AM1_4717 4740966 .. 4740980 +  -4.2  -2.88663   AACCTATTTCTGGCA               GAAACC CAG GGTATC               TGTCTAACCGTCGAT  46 40
    AM1_4718 4743168 .. 4743186 +  -4.5  -3.53224   ATTAATTCTAACTGG             CGATAGC TGGAT GCGATCG             TTTAAGGAACCACTG  55 241
    AM1_4720 NONE
    AM1_4721 4746914 .. 4746950 +   -19  -3.31144   ATCCAGTAATCTGCT   GCGTCAGGAAGTAGAAG CTAT CTTC-ACTTCCTGACGC    TTATCGCAGTCACAC 100 32
    AM1_4722 4747581 .. 4747625 + -10.1  -2.62515   TCAGTAATGGACTGA GAGCTATGGGTGAAACCAA CTCTCTT TTCGGCTCACCCATAGCTC TACTATCACCGCCTT  71 34
    AM1_4723 NONE
    AM1_4724 4753417 .. 4753456 +  -7.8  -2.89742   CGTCCGATAGCTGAA  CCTCTAACCCTGTCGTTC TCCC GGACTACGGGGTTAGCGC   TATCTCAGACTTCAC  61 31
    AM1_4725 4755301 .. 4755336 + -12.8  -3.99924   TTGTCTAAATCTTTT    CTCTGATCTCACTT AAGAAAAG GAGTGAGATCAGAG     TGTTTTGTTCCTGTT 100 79
    AM1_4726 4757867 .. 4757906 +  -2.9  -4.83246   TACTTAGCTAAATGC  AGAGGCATGAGTTCT AACAATGAAC GGAACTCATACCTCG   TTTATTTGTTTGTAC  67 69
    AM1_4727 4761421 .. 4761432 +  -4.4  -3.28791   TCAATTGGCGATTGT                TAGG GACT CCTA                 TTCTCCACCGACGCT  51 151
    AM1_4731 4764355 .. 4764369 +  -5.7  -3.28712   CGATCTGGGACGATA               CCAAC CATTC GTTGG               TTATCCAAGAAAGGG  57 91
    AM1_4736 NONE
    AM1_4737 NONE
    AM1_4738 4776169 .. 4776197 +  -4.5  -3.21276   AGATCATCAAGCGCC        GTGGGACAGCTAA CCT TTACCCCTCCCAC        TGTTCTCAGCCAACA  51 13
    AM1_4739 4777039 .. 4777069 +  -3.2  -4.08216   GACCGCTGCTTCCGG       GCCAAGGGTCAA AAAGACA TTGACCTCAGGC       TTTTGGGCAAGATAG  58 392
    AM1_4741 4778356 .. 4778388 +  -3.6  -2.68695   GTGCCAAAATAATTC      TCCATCGTTTTT CTGGGTTGA AAAAACGATGAA      AATTTTTAGCTTTAT  44 29
    AM1_4742 NONE
        ompA NONE
    AM1_4744 NONE
    AM1_4746 4783459 .. 4783475 +  -5.1  -3.08211   TTTCGAGGGACACAC              CGATTCT GTC AGAAGCG              TAATTTTGCAACCGT  53 45
    AM1_4747 4785852 .. 4785870 +  -3.9  -3.68886   CCCTAGCCCGTGTAG            TGCC-TCA ACAT TGATGGCA             TTTAGCTGAGTTGCT  55 234
    AM1_4755 4797833 .. 4797849 +  -5.2  -3.31322   ACTAAAAACCCGAAA              TCCTTT CCAGA AAAGGA              TTGTGGCAAATTAAC  55 283
    AM1_4758 4800708 .. 4800745 + -25.9  -4.35524   GCCGCTAGTGCTTTA   GTTTCAGGGGGTTGGAT AATT ATCCAACCCCCTGAAAC    TTTTAAATTTCGAAC 100 49
    AM1_4759 4801843 .. 4801860 +  -9.9  -3.19463   CCGCCACCACCCCAA             CCGATGT CCAA ACATCGG              TTAATAAGTGGTGAG  70 464
    AM1_4764 4806607 .. 4806620 +  -6.7  -2.90615   CTCATCAATAATTAG               CTCTG TTAG CAGAG                TGGTTTAGGGGGGAT  58 224
    AM1_4766 4807288 .. 4807299 +  -7.2  -3.21276   CTGGGTTTCTGGTTT                GCCG AAAT CGGC                 TGTTCTGCCAAGGCA  60 55
        glpD NONE
    AM1_4768 4810868 .. 4810879 +  -2.2  -3.05816   AGCTCAATATCTTCG                GGTG ACTA TACC                 TTGCCTGCAGAATCC  42 196
    AM1_4769 4812504 .. 4812517 +  -2.3  -3.17075   AATGTCCTGAATATA               GGCTG CTGG CAGGC                TTAAATTCAAGGCGC  43 408
    AM1_4773 4814935 .. 4814959 +  -6.6  -3.83998   ACTGACTAAATTAAA         CTAATCAAGAG TGGA CTCT-GATTAG          TTTAATATGCAGTAC  67 274
    AM1_4784 4820565 .. 4820575 +  -5.4  -3.21912   CTTTATTTTCCAATG                 CTAC CTG GTAG                 TTAATAAATTGACCG  52 503
    AM1_4787 4824050 .. 4824062 +  -2.7  -2.77891   ACCAGCCAGTCACGA                TGCTA TAT TAGTA                ATCTTTATGATTCTA  42 415
    AM1_4789 NONE
    AM1_4790 4826633 .. 4826653 +  -6.1  -2.95521   TTACCCCTTGCAACC            CGAATGGTG CAT CGCCATTCA            TGTGATTAGTCTAAA  56 253
    AM1_4792 4828342 .. 4828362 +  -6.1  -3.02144   GCACGATAGAAGCCA           CC-GCGGG CAGATT CCCGCAGG            TCTTCGACCACGTAG  53 52
    AM1_4798 NONE
    AM1_4799 NONE
    AM1_4800 4837586 .. 4837596 +  -5.4  -4.06864   CCCTACGTTGCCTGT                 CGAT TCG ATCG                 TTATTGTTATGTCAC  63 167
    AM1_4801 4838679 .. 4838708 +  -5.7  -3.20494   TTGGGTGTAAGTTAA       GTGGGGTTGAGAA GATT TTTACAGCCCTAC        TGTTAATCATTCCAT  55 44
        hemB 4841619 .. 4841660 + -12.5  -4.07687   CAGACTTCGTTGAAC TTAGAAAGCTGGCCTTT TCTTGTAT AAAGGCCAGCTTTCTGC  TTTTAGCAAGGGGCT 100 44
    AM1_4806 4844807 .. 4844826 +  -5.1  -2.89881   GAAGAATGCTAGATT            TGTCATA CAACCT TATGACA             TCTATGCCATGCGTA  50 183
    AM1_4807 NONE
    AM1_4808 4845796 .. 4845840 +  -3.6  -3.09968   GGGACATAGCGTATA GCCTATCGTTGCCTTGTG CAGAAGAGC CTCAATGTAATGATGGGC TGTTGGGATTAACTC  46 310
    AM1_4811 4847225 .. 4847251 +    -5  -3.52204   TCCGTTTTACTAAAG         GGCAATTCTTCG TCT CGAAGATGAGCC         TTAATTTGAAAATGA  55 359
    AM1_4815 NONE
    AM1_4817 4852855 .. 4852866 +  -5.8  -3.55563   AAACATCGTTAGCAA                GCTC AACA GAGC                 TTTCAGCAGTGGAGT  59 523
    AM1_4818 NONE
        rmlD 4855447 .. 4855463 +  -4.4  -4.15066   TCTGGTACATCATAG              GTGTGT AATTC ACGCAC              TTTCGTTTCTAAATC  62 480
    AM1_4822 4858340 .. 4858350 +  -2.6  -3.06831   ATTTTATGTTCATGC                 TTAA GCC TTAA                 TTCCATCGCACTTCA  43 236
    AM1_4823 4860190 .. 4860201 +  -2.2  -3.59262   AATTTTGAGGATCGG                CTCT CGCA GGAG                 TTTGGCGATATAGAA  47 206
    AM1_4827 4864196 .. 4864206 +  -5.4  -4.09519   ATTCTGTTCAAGACT                 TTGC TAA GCAA                 TTATTTGTGGATGAT  65 41
    AM1_4828 4865541 .. 4865557 +  -2.1   -3.9122   CAAGGGCCGTAGAGC              GTTGGCC AAA GGCGTAC              TTGTTTGGGACGGTA  52 213
    AM1_4831 4868065 .. 4868082 +  -4.2  -2.60615   AACACTTTATTTAAC             TTCTGA TTAACC TCAGAA              ATATTTAGGAAAGGT  45 63
    AM1_4832 4869506 .. 4869522 +  -2.3  -2.68356   GCATCTAGTGGAATT              TTTATAC TAA GAATAAA              CTTATAGATTTAAAT  40 46
    AM1_4833 NONE
    AM1_4834 NONE
    AM1_4835 4873677 .. 4873689 +  -4.8  -5.08824   GATGATAGATGCGAC                GTCG GGCAG CGAC                TTTTTTGGATAAGAG  80 496
    AM1_4837 NONE
         trx 4880104 .. 4880133 + -12.1  -4.16182   ATTTTTCGTTCCTGA       CGGTAAGGCGAAG CGCG CGCCGCCTTACCG        TTTACTTTGTCCTGC 100 49
    AM1_4840 4881334 .. 4881366 + -12.7   -5.1675   ATACTTTCCTAGAAC      GTCTCGTGGTTTCCC GTT GGGGCACTACGAGGC      TTTTTTGATCGGTGA 100 60
    AM1_4843 NONE
    AM1_4844 4885978 .. 4885988 +  -2.4  -3.66921   TGGGAGGCTGTGCTA                 GGAC CTT GGCC                 TTTAAGCTTAGGGTT  50 318
    AM1_4846 4889134 .. 4889167 +  -3.8  -3.57144   AAGTGATTTCAGAAT     CTCCTCGGAATTGC ACATTG GCAATGCTGGGCAG      TTTAGCCGTAAAAGC  52 337
    AM1_4848 4890743 .. 4890756 +  -3.9  -3.51708   ATCTCAGCACAATGC               TTCAA GTGT TTGAA                TTCCTTTGAGAACTG  51 186
    AM1_4849 4892859 .. 4892873 +  -2.9  -3.69809   GCGCCACTTCTGAAT               TTTTC AGCAA GAAAA               TTAGTTTGTTGGCTA  51 401
    AM1_4856 4900346 .. 4900364 +  -4.6  -4.06678   GCCCTAAGTTTAGGG             GATGTAAA CCA TCTACATC             TTTATCTGGATCAAT  62 517
    AM1_4858 4901349 .. 4901361 +  -4.7  -3.17392   TTTCTAGCGCCTCAT                CTGCC AGG GGCTG                TTGACTTAGGCGATG  50 282
        thrB 4904917 .. 4904931 +  -2.8  -3.73534   CCTCTAAAGGCGCTA               CTAGGT ACT GCTTAG               TTCTTAATGCCGTTG  50 63
    AM1_4869 4922399 .. 4922421 +  -2.6  -2.79679   GCTAGAGATCTATAA           TCGTCATCCA TTA TGGGAGGTGA           TATCCTGGCACTCTT  42 26
    AM1_4870 4923458 .. 4923485 +    -7  -5.14563   ATACCTACAAATCAA        CGGATGGCTAGTC TTT GGAT-GCCATCCG        TTTTTTCATGGGCGG  88 135
    AM1_4871 NONE
        topA 4926315 .. 4926327 +  -6.3  -3.19157   CTATTCAGCGAAAAT                CTTGT TAA ACAAG                TTGGTGACCTTGCTA  57 357
    AM1_4874 NONE
    AM1_4875 NONE
    AM1_4877 4929681 .. 4929699 +    -3   -3.8211   CACCTTTGAGATAGA             CACTGGCA AGC TGCCAAAG             TTCTTGTCCATAACG  54 447
    AM1_4879 4930884 .. 4930897 +  -3.8  -4.30014   ACAAAAACACCTGCG               GAGC TGTTCT GCTC                TTTTAGATTGATCAG  63 50
    AM1_4883 4933659 .. 4933671 +    -2  -2.97513   ATTTTTTCAAGGTAC                TTCT ATTGA AGAA                TGTAATTCTGAGTCT  42 17
    AM1_4884 NONE
         pep NONE
    AM1_4886 4936593 .. 4936638 +  -6.1  -3.40597   ATACAGATAATTAAT CACCGCCGTTGCCAGGGTATGG GTG CCATCTTTGGGCAA-GGAGGTG TCTTTGCGTGGGGGC  61 79
    AM1_4892 4942190 .. 4942203 +  -5.3  -3.54424   CCCGTACCTGGAAAA               TCATG AGGA CATGA                TTTACGAAGCTAGAG  57 62
        pncB 4945301 .. 4945314 +  -2.3  -3.28745   CTCGCCGGACATCAA               AGGCT GCTT AGCCC                TTAACTTCTTGCCCA  45 15
        nadD NONE
    AM1_4898 NONE
        nadE 4948847 .. 4948865 +  -5.3  -2.55896   TAATGGAATCACTTG             TCTATCC TCCTC GGGTAGA             GTATTGGTTGATGAC  49 477
    AM1_4901 4950529 .. 4950546 +  -6.9  -3.57144   CCGCCTTCAAAATCA             CAACCCC TTGA GGGGTCG              TTTGCAAATAGCGGC  61 344
    AM1_4904 4952139 .. 4952162 +  -3.1    -3.445   CTGATGTATCTTAGG          TGGGGCAAG CCGTTA TTTGCCGCA           ATTTTTCATGAATGC  49 37
        fcbC 4952935 .. 4952953 +  -5.4  -3.58522   AAATTAGAAACATAT             TTTGTAAT TTG ATTACAAG             TTTGGGCATACTAAT  59 353
    AM1_4906 4954614 .. 4954627 +  -3.1   -4.3739   TAGCCAGAGTCGATT               GATTC AAGA GGATC                TTTTCTGAGGCGGTG  62 249
    AM1_4911 NONE
    AM1_4912 4959438 .. 4959453 +  -4.7  -2.98823   AGTAATATCAGAAAG              GAGCA ATTTAA TGCTC               TATCTGTGCAAACCC  50 168
         prk 4960569 .. 4960598 + -11.5  -5.66684   TATAGATTTCTATAT       TCAGGTGTTGGGG CTGC TCTCAACGCCTGA        TTTTTTTATGGGTTA 100 53
        folB 4962033 .. 4962049 +  -3.7  -3.02263   AAGAAATTGATACTA              TTGGC TACGAGT GCCAA              TGTTCAAAGACGTAT  46 117
         hli 4962397 .. 4962423 +  -7.4  -5.75342   CTATCAAACTTTCAA         TATCTTTGCTCG CTT TGAGTAAGGATA         TTTTTTTTGCCAGCG 100 118
        ftsH 4964816 .. 4964838 + -19.2  -4.66163   AACATTCCTTTGGGT           GGCCCCATGC TTA GCATGGGGCC           TTTTTCGATCGAGAT 100 54
    AM1_4918 4965436 .. 4965461 + -11.9  -3.38072   TCAACCAATCAATGA         GGCTGGGAAGT AGAC GCTTTCCAGCC          TTCCTGTTAGATAGC  89 109
    AM1_4921 4966685 .. 4966700 +    -4  -4.07568   AAAGGCTAGATTGCC              GCCATTC CAA GAA-GGC              TTTTAGCCGCAAAAG  59 39
    AM1_4922 4967628 .. 4967646 +    -6  -3.01924   ATTATGAACTCATGG             TTCGGATA CAT TAGCCGAA             TGTTCAAAACACCTA  54 12
    AM1_4923 4968149 .. 4968165 +  -5.1  -3.63195   CTTCCCCCATTATAT              CGGGT CAAAAAT ACCCG              TTGATTTGGTGTTTC  59 91
    AM1_4924 NONE
    AM1_4925 4969162 .. 4969177 +  -3.2  -4.37971   TAGAAGTATCATCAG              CTAACC TCTC GGTAAG               TTTTACTGCTATTTT  61 22
    AM1_4926 4970092 .. 4970126 +    -5  -3.70149   GATTGATACTCGTAC     TTTGCAGAATTCCAAC TCC GGTGAAACTCTGCAAG     TTTGAATGATGTCAG  57 54
    AM1_4927 4970560 .. 4970571 +  -2.2  -3.41051   GCACTGTAGCCATTC                TGTC CCTC GGCA                 TTGTCCTACAGATAA  47 116
    AM1_4928 NONE
    AM1_4929 NONE
    AM1_4930 4972414 .. 4972425 +    -3  -2.66882   AAAGGAGAGAAATGT                TTGA GTTA TCAA                 CTATTCTCTGTTTAG  42 220
    AM1_4931 4973185 .. 4973206 +  -3.7  -3.62597   TGGCAGATAATCCCC           CGGCTTTGAG CGA CTCAAC-CCG           TTCTTGCGGCGTAAA  53 463
    AM1_4935 NONE
    AM1_4936 4975778 .. 4975788 +    -4  -3.17586   AGGGTTATCTAAACT                 GATT GAC AATC                 TCTTCATAAGTTAAT  49 202
    AM1_4937 NONE
    AM1_4938 NONE
        panF NONE
    AM1_4940 4979549 .. 4979559 +  -2.4  -3.68351   AAACCGATAATGCTT                 GCGC ACA GCAC                 TTTGAATGGTCCAAG  49 63
    AM1_4944 4983016 .. 4983028 +  -2.6  -3.12606   TCAAACTATGGGCAA                GCTG AATAA CGGC                TTGAATAATCTCTGA  45 404
    AM1_4947 4985765 .. 4985790 +  -9.8   -5.1361   GCACTGAATCCATGA         CACTCCAGGA GTTACA TTCTGGAGTG          TTTTTTGCAGTTTCT 100 110
    AM1_4948 NONE
    AM1_4949 4987701 .. 4987724 +  -3.9  -3.15544   AGATTTTTTCCACGA          TATCAGACA CCACTT TGTCTGGTG           TTGATGCCCCTGACG  48 104
    AM1_4953 4992324 .. 4992346 +  -4.8  -3.14564   CCGGCTGTAGATCGC           CTTCGTGG AGAATGC CCACGCAG           TTAATCACCCAGTAG  50 525
    AM1_4957 4996704 .. 4996714 +  -4.6  -3.37513   ATTTAGAAGAACTGG                 GGGC ATT GCTC                 TTAATCTTGGGGTGT  52 333
    AM1_4961 4998591 .. 4998605 +  -7.1   -3.0127   TAAGCTCGTACAATC               CCAGG CAAGA CCTGG               TATGTGCTTCCCTCA  61 476
    AM1_4962 4999875 .. 4999904 + -11.5  -2.80245   TTTCGGCCAACAACA       CAACACCACCAGA CGCA TTAGGTGGTGTTG        ATTCTATTGGAGTCG  76 455
    AM1_4964 5002440 .. 5002475 + -13.4  -3.05597   AGAGTCAAATATCTT    CAAGGCGTAGTGTACA GTGA TGTTGACTACGCCTTG     CTTTTGGGGACTACA 100 64
    AM1_4965 5005545 .. 5005556 +    -3  -2.58249   TCTATAAAAACTTAA                TTAG AAAC CTAA                 GTTCTAGAAAATGTA  42 180
    AM1_4966 NONE
    AM1_4967 NONE
    AM1_4968 5011720 .. 5011742 +  -3.3  -3.31144   GCCGCAGCCGCAGAA           GCCTGGTCA CAAGC TGCCCAAGC           TTATAAAGGTCAGCC  47 421
        hslO 5018749 .. 5018772 +   -11  -3.55202   ATTTAAAAACCGAAG          CAGGGGCCTA GTTC TAGACCCCTG           TCTTATTTCAAGCTA  83 15
    AM1_4976 NONE
    AM1_4977 5022375 .. 5022404 +  -2.9  -3.71848   GGTGAAGACGTCCTT       CTC-GATCTGACTG GGA TAATCAGGTCAGAG       TTATTACTCGCGCGG  50 140
    AM1_4978 5022840 .. 5022850 +  -3.2  -4.65895   GAATAATTTGCTGGG                 CTGG ATT CTAG                 TTTTTCAGTAACCCA  65 35
    AM1_4979 5024415 .. 5024425 +  -5.4  -3.28592   CACCTCTGATTTAAC                 TTGC TTG GCAA                 TAATTTTTGAATTCA  54 219
    AM1_4986 5033509 .. 5033525 +  -6.5  -2.73635   TTTCTTCTAGCTAAA              CAGCCCA GAT TGGGGTG              ATTTGAGCCCATTTA  55 79
    AM1_4988 NONE
    AM1_4989 NONE
    AM1_4990 5041500 .. 5041531 +  -2.1  -4.15508   AAAATGGAGTCTGAT      GGCCCTTACCCTA CCAATC TTGGGAGAGGGAC       TTTTAAGACTTCATT  55 80
    AM1_4991 NONE
    AM1_4992 NONE
    AM1_4993 5043771 .. 5043785 +  -5.6  -3.54543   CACCGTGGTAATTGC               TCGGGC ACC GCCCCA               TTTAGCCAGCTGAAT  56 514
    AM1_4996 5046464 .. 5046480 +  -3.7  -4.42748   GAGTTAAATCTAGGT              GTTGG CAGGAAT CCAAC              TTATTTTTGGAATGA  65 166
    AM1_4997 5046717 .. 5046727 +  -3.2  -3.05046   CGGATTAGAGATATA                 GCGT TTC ATGC                 ATTTTGAACAGGTAA  44 41
    AM1_4998 5047147 .. 5047161 +  -2.1  -2.62144   CTGTTCCCATGCATT               TGGGA AGAGA TCTCA               CTGTTGTCCTTTAGG  40 71
    AM1_4999 NONE
    AM1_5000 5048135 .. 5048145 +  -6.8  -2.66326   TCAATTCACGGGCCT                 GCTG TTG CAGC                 TCGGTTTGCAGTTGA  53 180
    AM1_5006 NONE
    AM1_5007 5055113 .. 5055130 +  -3.5  -3.16191   GAGTGAGTAGCCCAT             G-CTCAAA GGG TTTGAGGC             TTAATACCACTGTGA  48 31
         hli 5055469 .. 5055491 +   -12  -4.99638   TCTTCCTTGTTATAA           GACCCCGGTT TTG AGCTGGGGTC           TTTTTCTGTAACTGT 100 84
    AM1_5012 NONE
        ubiG NONE
    AM1_5015 5058906 .. 5058918 +  -4.8  -2.64462   ACCGATGCCGTAATC                CCCA GATGA TGGG                TGAGTTCTAGTTCTT  46 289
    AM1_5016 5061727 .. 5061737 +  -3.2  -3.18728   TTATTAACCGGAGAT                 TGCT AGA GGCA                 TTCAATCTTCGGAGT  46 34
    AM1_5018 5062932 .. 5062949 +  -3.3  -3.61398   TCATCCTGGGTCTGC             TGGCAAG GCGA CTGGCCG              TTGTTAACGAGAAAC  51 73
    AM1_5020 5063313 .. 5063340 +  -5.6  -3.10641   TCTGATTCTTTACTT        ATAGGCTTCTAT ATAG ATAGAAGCCCAA         TTAGATGCTGCGTTG  55 36
    AM1_5021 NONE
    AM1_5022 NONE
    AM1_5023 NONE
    AM1_5024 5068952 .. 5068968 +  -3.7  -3.85698   ATCTATGATTGATAC              TCGATTC TCA GAGTTGA              TTTCTCAACAGAAAC  56 33
    AM1_5027 5072635 .. 5072648 +  -3.8  -3.01918   GCGGCTGGTTTCTTG               GAGC AGGGAA GCTC                TCATTTCTACCGTCG  47 372
        recA 5079161 .. 5079176 +  -3.2   -3.2794   GTTGAGGAAGAAGAG              GCCG CATAATAC CGGC               TTAATCTCCATCCCC  47 17
    AM1_5032 5079613 .. 5079639 +  -7.2  -3.82604   TCAATGTTTTTCATA         TGCCTTCGCCCT AAA AGGTTGCAGGCA         TTATTAATTGACTGC  70 12
    AM1_5033 5080565 .. 5080576 +  -5.8  -3.80893   CCGTTAAACTTTTAG                CACG TCAG CGTG                 TTTGAATTATGACCT  63 34
    AM1_5034 5083222 .. 5083238 +    -3  -3.61398   CCCAATCAACGAGCA              CGAGAT CTGCC ATTTCG              TTCTTGGCCAAGCAG  49 431
    AM1_5036 5085384 .. 5085401 +  -2.7  -4.47551   ATTTTTTATTCAATT             CGTAAGT AAGT ACTTACA              TTTTATCGCTTGAAT  61 41
    AM1_5037 NONE
    AM1_5038 NONE
    AM1_5039 5089205 .. 5089240 + -20.6  -3.21912   AAAAGCTGTGTATAA    CCCTACGGTCCAAACT AATT AGCTTGGACCGTAGGG     TTGATGGCTTACGGA 100 322
    AM1_5043 5090988 .. 5090998 +  -3.2  -3.09112   ATCTCAAACGACCAT                 CTGG TAG TCAG                 TCTGCTATTTTTTAA  46 305
        psbU 5092125 .. 5092152 +  -5.6  -3.38316   ATAATCACCAAGGCA        CGGGTGGGAT ATGGGGGA ATTCCATCCG         TTCATTCCATCATGA  57 37
    AM1_5047 5093791 .. 5093825 + -13.6  -5.09225   CTCGCTCAAACAAAT     CCCCAGGTAGATCTTT TAT AATGACCTGCCTGGGG     TTTTTTAGCTGGGCT 100 389
    AM1_5049 5095889 .. 5095902 +  -6.7  -3.63968   GTTATGGACGTGTCC               GGCTA ATTG TAGCC                TTTGGAAGTTTAAAG  65 20
        psbT 5097205 .. 5097221 +    -3  -5.15117   TGATTGGCCCAAAAT              CTGATT CAAAT GATCAG              TTTTTTGAGGTTTTA  75 117
    AM1_5055 5102191 .. 5102212 +  -2.9  -3.40102   AGCTGCTGGTCTCCA           GAATGGTGG GAGA CCACAAATC            TCTTCCTTTCTATAG  46 105
    AM1_5056 NONE
    AM1_5057 NONE
    AM1_5058 5105162 .. 5105172 +  -6.8   -3.5774   TCTGTGTATACCTAC                 GGGT AGA ACCC                 TTTCCCAGCTTGGGT  65 90
    AM1_5059 NONE
    AM1_5060 5106636 .. 5106655 +   -10  -4.74453   GGTTATTATTTTGAA            CCCCACAT TTAT GTGTGGGG             TTTTTAGCTGTCTTG 100 57
    AM1_5061 5107018 .. 5107028 +    -4  -2.72166   TCACTTCCACTATCC                 TCAA AAG TTGA                 CTATTTCGTTGACGC  44 266
    AM1_5064 5113678 .. 5113689 +  -2.2  -4.26076   CCCCGTCAAACTATT                GTCT GGCA AGGC                 TTTTGATGGCCATAC  58 103
    AM1_5067 NONE
    AM1_5068 5122015 .. 5122029 +  -7.2  -3.09327   ACCAAGTTATCTATT               GTCAAT AAT ATTGAC               TATTGAATGAAATAC  62 137
    AM1_5071 5123965 .. 5123975 +    -4  -4.68593   ACTAGAGTTACAGCG                 TGTT TTG AACA                 TTTTTGAATAATAAC  68 45
    AM1_5073 NONE
    AM1_5074 NONE
    AM1_5075 5128090 .. 5128112 +  -7.6  -3.23274   TTAACCCTTCATTCC           CGTCCTGGGC AGT GCCCACAACG           TTGACTTCTGGGGCA  62 331
    AM1_5082 NONE
    AM1_5083 5137705 .. 5137720 +    -4   -3.8211   GGTGGAGGATGTTGC              TAAACG ACGC CGTTTG               TTGTTGTGGATCGAG  57 23
    AM1_5084 5138712 .. 5138726 +  -4.2  -4.32177   CGCTGGGAGTGGTTC               GAGCTG CGG CGGTTC               TTTGTTATGACATCA  63 1
    AM1_5085 NONE
    AM1_5086 NONE
         aat 5147243 .. 5147258 +  -3.2  -2.78384   TTTTGTCCTGAATAA              CACCCA AACT TAGGTG               TATACTGCGGACGAC  43 65
    AM1_5094 5148518 .. 5148528 +    -4  -3.48738   CAATCCTAAAAAAGG                 TGTT AGA AACA                 TGTTTAGTGCTCCTC  52 145
    AM1_5095 5150564 .. 5150576 +  -3.5  -4.06687   GAATGTTAACTTATA                TTATA AAT TATAA                TTATTTATAACCAAT  58 247
    AM1_5096 5151463 .. 5151475 +  -3.4  -4.12748   AGTGATGTGTTAGAA                GGAT TTGAT ATCC                TGTTTTTCTGTCGTA  58 28
    AM1_5098 5152340 .. 5152350 +  -6.8  -3.06183   CCTTTATGTCATCCA                 CCCA TGC TGGG                 TTGGATAAACCTAAA  58 151
    AM1_5099 5154481 .. 5154491 +  -6.8   -3.1706   GCGATAGCTGACCGA                 TGGC AAC GCCA                 TTAATAAACTCCGTT  57 471
    AM1_5101 5156500 .. 5156526 +    -3  -3.64812   TTCAATTAAAGGGAA         TCTTCCAAAATG CGA TGTTCTGGAGGA         ATTTTTTCAATGGCA  51 109
        ureD NONE
        ureA NONE
    AM1_5105 NONE
        ureB 5159808 .. 5159821 +  -4.5  -3.32022   ATTGTTAAGGAGTCT               GTTCC AAAT GGAGC                TTGCTATCTCCCAAA  53 275
    AM1_5107 NONE
    AM1_5108 5171462 .. 5171479 +  -4.1  -3.73107   TAAAGGTTACAGCGA             TCAAACG TTAC CGTTCGA              TTTAGAATTTACTGG  54 116
        ureC 5173649 .. 5173661 +  -2.7  -2.70932   GTCGTAACAACAATA                TCTTG TAT TAAGA                TGATTGCGAAAGAGA  41 447
    AM1_5110 5174289 .. 5174321 +  -5.8  -4.46072   GGAGTATCTCTTTTC      TCTAAAGAGGAA CCACTCATC TTCTTCTTTAGA      TTTATCTTTATTAGA  73 177
    AM1_5112 5175254 .. 5175266 +  -3.3  -3.65902   TGTCTTGTCTGGGGA                CGTTC AAT GGGCG                TTTCAGTCACATCCA  51 451
    AM1_5114 NONE
    AM1_5115 NONE
    AM1_5116 NONE
    AM1_5117 5177240 .. 5177250 +  -6.8  -3.04248   TTGTGGACGCTTTTT                 GAGC TTC GCTC                 TATTGCCACATCTTG  58 63
    AM1_5119 5179304 .. 5179318 +   -10  -2.57881   GCCCTTAAAAGAGAG               GGCTTG TTA CAAGCC               ATTATGCCCACGTTA  71 129
    AM1_5121 5180345 .. 5180369 +  -2.8  -4.56597   GTGGATTCCGAATCG         CGGC-TCTGGC AAAG GCCAAAAGCTG          TTTTTGGCCCCCCGA  65 288
    AM1_5122 5183146 .. 5183158 +  -2.7  -2.85659   TAGTCCGGGGTATCC                TAATC AAC GGTTA                CTTCTATATTTCAGT  42 38
    AM1_5123 5184872 .. 5184904 +  -9.2  -3.55444   ACCTAAATACCTCCA      TCGCTCCAATGACA ATTAG TGGCATTGGAACGA      TTTGCCCACTCAAGG  76 35
    AM1_5124 5185234 .. 5185252 +  -3.8  -3.06183   GCGTAGAAAATTCAG             GCTTATGT TGA GCAAAAGC             TTGCCTCAAGATCCG  46 15
    AM1_5126 NONE
    AM1_5127 5187568 .. 5187600 +  -8.5  -3.30441   AGCTTATGCACTCGC      GATTTCTAACGCTTG TTG TAGGCGTTTGAGATC      TTCTCCCCGCTGATG  69 39
    AM1_5131 5189934 .. 5189958 +  -2.2  -2.75844   GATGGCATGCATTAT         CGACCGTTTGA GTCT TCAAACA-TCG          GTTTCCAATCCAGCA  41 75
    AM1_5133 5191551 .. 5191567 +  -3.6  -4.18762   TATCTGCAGAAATAA              TCGGCC CATCC GGACGA              TTTTCGATCAAGGTT  60 453
    AM1_5135 5198845 .. 5198865 +  -7.6  -3.53012   TCTCTTTAAATATCA            CCGTTTCA CAAGC TGAGACGG            TTTCAGGGCGGCAAA  66 348
    AM1_5138 NONE
    AM1_5142 5204653 .. 5204664 +  -2.2  -4.34759   GTAACAGTCCCCTAG                CCTT ATTG AGGG                 TTTCTTCATATTCTC  61 416
    AM1_5146 NONE
    AM1_5147 5211160 .. 5211170 +  -2.4  -4.26076   CAGTTGATCAGCAAT                 CCGC TGG GCTG                 TTTTGATGGGAATGG  57 480
    AM1_5149 NONE
    AM1_5150 NONE
    AM1_5151 NONE
    AM1_5152 5214232 .. 5214244 +  -3.3  -4.23674   AATTTGTTGAATGCT                GGGGG GTT CTTCC                TTTGTATTAATAAAC  60 270
    AM1_5155 5218910 .. 5218921 +  -5.8  -2.94032   TCAAGAATTAAATAA                TGGG CGTA CCCA                 ATTTCGTTAAGGAAT  54 56
    AM1_5156 5219397 .. 5219407 +  -5.4  -3.47806   AATATCAAGGGCAAC                 TAGC CAT GCTA                 CTTTTTGCTATGGCA  57 113
    AM1_5157 NONE
    AM1_5158 5222783 .. 5222795 +  -6.2  -2.77899   CAAAAGCAGGCATAG                CGGG TCATC CCCG                TGATTCGTCCGCCAG  52 267
    AM1_5161 5225666 .. 5225683 +  -4.1  -2.53911   CTTCTTAACTGAACA             GTGCC TGGAATTT GGCAC              TGACTTAACCATTCA  45 33
    AM1_5162 5226463 .. 5226474 +    -3  -3.07307   GCAATAACTCCTAAG                TCTA TTGC TAGA                 TTGGATGAGCATTTA  46 34
    AM1_5163 5227168 .. 5227178 +  -4.6  -3.60792   ACCCTGTCTAATCTT                 GGCG TTC TGCC                 TTTGACGATTAAAAA  57 59
        purB 5228746 .. 5228762 +  -6.5   -3.2964   CGGTAGACTAAGGGG              TCCGTGG GAA TCACGGG              TTCTAAAGAGCCTTT  59 226
    AM1_5170 5234910 .. 5234926 +  -5.1  -3.08966   ACAACCTTTACAGTC              CGATTGC CCT GTAGTCG              TTAGATAGACTTTGG  53 5
    AM1_5172 NONE
    AM1_5173 NONE
    AM1_5174 5239206 .. 5239226 +  -8.3  -3.53444   ATTCTCTACCTTTTG            GGCATTGCT AGA AGGAATGCC            TTTAGCAGGGCATAA  71 40
    AM1_5175 5240105 .. 5240121 +  -3.7  -4.05446   TATTCATTCCTTCTG              TTTTGTG ATG CCCAAAA              TTTATAGTTACGACC  58 152
    AM1_5176 5241082 .. 5241099 +  -4.9  -3.14463   TGGACAGCAAAATGC             CTC-CATC TTT GATGTGAG             TTGCTCAAACCCCTT  50 122
    AM1_5178 5243514 .. 5243530 +  -8.1  -2.53911   GACTGGACCTCCATT              TATCTTG GTG CAAGATA              TGAGTTAAGCCTTGC  60 6
    AM1_5181 NONE
    AM1_5182 NONE
    AM1_5192 NONE
        carA NONE
    AM1_5195 5258940 .. 5258959 +  -2.9  -4.08216   ACCCTAGGGCTACTC            TCAATTC AGTTGG GGATTGA             TTTTAACGGGGATAA  57 6
    AM1_5200 5263690 .. 5263704 +  -2.9  -3.77087   CATTGCAAAGCGAAG               TCATA ACGAC TATGA               TTTAACTATTGAATG  52 117
    AM1_5201 NONE
    AM1_5202 5264612 .. 5264642 + -13.4  -3.40597   ACCCATAACAGAACA       GGCTCCAGTGCA ACACTTC TGTACTGGAGCC       TATTTGAATCACCCG 100 91
    AM1_5205 5266812 .. 5266836 +  -2.2  -3.61178   ATAAGTGTCGCTGAT          TCTAATCCTT GCTGA AATGATTGGA          TTTGAGATAAATGAG  49 95
    AM1_5206 5267529 .. 5267545 +    -5  -3.07994   AAGCAAAGTAGGGCC              GCCCGG ATGGA CCAGGC              TTCCCTCAGCTTCCC  51 30
    AM1_5208 5271486 .. 5271504 +    -3  -3.93038   GTTGGCAATAAATCA             GCTTCACA AAA TGGGCAGC             TTTGATATTGAACTC  54 176
    AM1_5210 5273838 .. 5273849 +  -4.4  -3.53444   CTTCCGCGACCACAT                CCAT TCCC ATGG                 TTTGGGCCAAGGTGA  52 258
    AM1_5214 NONE
    AM1_5215 5281037 .. 5281054 +  -5.7  -2.86164   AACCTGACATCCGTA             TCTAAAT GTTG ATTTAGA              TATAATCCTTGAAAA  53 48
    AM1_5216 5281378 .. 5281390 +  -3.5  -3.76224   TCAAATTTCTTATTT                TTATT GCC AATAA                TTTCATGCGTCAACA  56 196
    AM1_5217 5284073 .. 5284087 +  -6.4  -3.20348   AGTATCAGATTAGTT               TTAGCG AAT CGCTAG               TTCAATCTTAGTCCC  57 74
    AM1_5219 5285697 .. 5285721 +  -2.1  -2.98823   TTGTGCAACCCTTTG          TTCTCGTTGCT CAG AGCGATTAGAG          TATATGTGCAAACAA  42 3
    AM1_5220 5285996 .. 5286008 +  -3.3  -3.73647   GCTCATGTGTGGATA                GGGAG CGA CTACC                TTCTTGGTCAATCAC  51 160
    AM1_5221 NONE
    AM1_5222 5286999 .. 5287011 +  -7.7  -3.11569   TTGCACGGGACATTC                GGTCA GCA TGACC                ATTTCTGTATCTCTT  63 70
         dut 5287838 .. 5287852 +  -6.4  -3.58343   GGGACTCCGAACTAA               GGTTCT TTT AGGACC               TTTCCGGATAATGGG  61 278
    AM1_5230 5297371 .. 5297382 +  -4.4  -4.08557   CAATCACGACAATCG                GATG AGCG CATC                 TTGTTCTTTGACGAA  61 21
    AM1_5231 5298056 .. 5298076 +  -3.2  -2.88849   TAGGGTCCTTTAGTT            GGCCCAGA TTGAT TCTGGCTC            CTTTGCTGATCTACG  43 141
    AM1_5232 5298845 .. 5298857 +  -4.1  -4.59993   TAGCAGTGCAGCACA                TCGAA ACC TTCGG                TTTATTTATCCCTTT  68 42
    AM1_5234 5300729 .. 5300741 +  -5.5  -3.18839   TGAGCACGGGGAGTC                CTTGC CAA GCAGG                TCTATCTTTAGGGGT  52 505
    AM1_5236 5305071 .. 5305081 +  -5.4  -3.05844   TTGGCACTCGGGCTT                 GGAT GCA ATCC                 TATTAAACTGGGCAC  52 9
    AM1_5237 NONE
       sodCC 5306804 .. 5306819 +  -3.2  -3.55444   GATCCAACCCATCCA              TCAGCC CTTC GCCTGA               TTTAGCAACTGGACG  50 70
    AM1_5240 5307533 .. 5307549 +  -3.1  -3.19463   GAGGGGGAAGACGAA              TTTTTTA CTT TAAAAAG              TTCCTGGCTACTCAC  46 341
    AM1_5241 5308625 .. 5308636 +  -2.2  -3.92592   CTTATCCTCGTCACT                GGTT ATAA AGCC                 TTTAGTGTTGAACAT  53 18
    AM1_5242 5309243 .. 5309271 +  -8.1  -2.75307   TCAGCATAGTCAAAA        GATGAGGATAGGC AGT GCTGAACCTCATC        TACTTGCGGTCTCTT  61 172
    AM1_5243 5310395 .. 5310406 +  -2.2  -2.65962   TGATTGTCTTTGTTC                TAGC CCTT GCTG                 CTGTCTTCTTTTCTC  39 83
    AM1_5250 5319878 .. 5319892 +  -4.2  -5.11613   AATTAAGGTGTTGTG               GGAATC TCA GAATCC               TTTTTTAGCTGGTAT  78 122
    AM1_5251 5321672 .. 5321683 +  -4.4  -2.82082   TTCTTTATTTTGGCT                CTGA TGGC TCAG                 TCGTTGCTGGTTGAT  46 263
        lepA 5326799 .. 5326809 +  -5.4  -3.04902   TCTGGCAACGGCTTC                 TTGC ACA GCAA                 CTTTATCTGCTGCGC  51 340
    AM1_5257 NONE
        menB 5328875 .. 5328925 +   -12  -4.76892   CCATGTCAGCATTGG CTAATTACAGTTCAGGGAGCAAGT TTG ACTTGCTCCCTGACGTTTAAATGG TTTTTGAATTGATCT 100 78
         xth 5330788 .. 5330801 +  -8.1  -3.07443   TCCTGTTCTGATAGG               GCGAC AGAA GTCGC                TTGAATAACATCTGA  60 228
    AM1_5266 5338150 .. 5338169 +  -2.8  -2.68223   TGTTCAATGCCCATT            CGTTC-CTG ACT CAGAGCACG            GTTATACTCTCGCTG  41 428
    AM1_5269 5339830 .. 5339860 +   -14  -2.50994   TTACTTTCAGTTTTA       TGGGGGTATCCAGC TAA GCTGGACACCCCAA       ATTGATAGCGTTAAG  93 300
    AM1_5272 NONE
    AM1_5273 5341929 .. 5341940 +  -4.4  -4.08557   CAATCACGACAATCG                GATG AGCG CATC                 TTGTTCTTTGACGAA  61 21
    AM1_5274 5342550 .. 5342570 +  -4.7  -3.26717   AGTAATCGAAATTAC            GTTGCGAGT AAT ATTCGAAAC            TTCAGTTCTCTACCT  53 77
    AM1_5275 5343657 .. 5343667 +  -2.4  -3.10894   ATCATGAGGCGGCTT                 CCCG TTC CGGC                 TTAACTCATGGTGGT  43 11
    AM1_5276 NONE
    AM1_5277 NONE
    AM1_5278 5348787 .. 5348797 +  -5.4  -3.53012   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 78
    AM1_5280 5350504 .. 5350514 +  -5.4  -2.71364   GAGGAGTACTGGCTG                 GTGA TTA TCAC                 TACTTACCCCCATCC  49 120
    AM1_5282 5350782 .. 5350803 +  -5.9  -3.10959   GATCAATATACGGCT           GCGTTCTATG CTG CATAG-GCGC           TATCTATTCCCCTTC  55 8
    AM1_5283 5352008 .. 5352024 +  -8.1  -2.54896   GTCTGGACCTCCATT              TATCTTG GTG CAAGATA              TGAGTTGAATGAACC  60 1
    AM1_5285 NONE
    AM1_5286 5353975 .. 5353999 +  -4.3  -2.57468   ACAGTTCATCTCCAC          ATGAAATTGGT ATG ACCTATTTCAA          CTTGATCTGGTGCCG  45 144
    AM1_5287 5354605 .. 5354617 +  -3.3  -3.65902   TGTCTTGTCTGGGGA                CGTTC AAT GGGCG                TTTCAGTCACATCCA  51 525
    AM1_5297 NONE
    AM1_5298 5362155 .. 5362166 +  -4.4  -3.52652   TCTAAACCGTATTGT                TCTC ATGT GAGA                 TTCTCGTTAAATCAA  52 271
    AM1_5302 NONE
    AM1_5304 5366693 .. 5366705 +  -5.5   -3.5394   TCGCCTCCTGGACCT                CAGGG GAT CCTTG                TTTGAGCACGGCTTT  56 205
    AM1_5305 5369085 .. 5369096 +  -2.2  -3.06183   CGGTTTGTTTAGGCG                TCAC CTCA GTGG                 TTGGCTAGGACTACC  42 6
    AM1_5307 5369628 .. 5369641 +  -3.7   -4.0641   TGGAAATGGCCCGCT               GCTGC ATGC GCCGC                TTTGTATGGCTAGGG  58 240
    AM1_5310 5375138 .. 5375155 +    -2  -4.45738   CCAAATAGGCCGAGA             CTCGAT CTAAAA ATTGAG              TTTCTTCTTGGGATG  61 432
    AM1_5312 5376950 .. 5376963 +  -8.1  -2.64099   TCAACGATAACATTC               TGCCC ATTT GGGCA                ATTATAATCACCACC  60 77
    AM1_5313 5378907 .. 5378934 +  -6.4  -4.53602   CGCCCCAAAGTCACC        TCGAACATGTCAC CCG GTGACA-GTTCCA        TTTGTTTGGTGTAGG  77 142
    AM1_5317 5383520 .. 5383532 +  -3.5   -2.6927   GTTGATTCATGCCAA                TTAAA TGG TTTAA                TGATCTCTGGAACCT  44 120
    AM1_5318 5383849 .. 5383881 +  -9.9  -2.58861   ACCATCAAAACCGAC      TTTACAGGGCGAAGC AGT GGTTCTCCCTGTAAG      CTTCTACCCGTAATC  66 91
    AM1_5321 5388355 .. 5388380 +  -3.3  -3.10905   TATTATCCGGTTGAG         CCGCTAGCTGAT TGG AT-AGCTGGGGG         TTAGGTGGGTTATAA  46 220
    AM1_5323 5389481 .. 5389501 +  -3.2   -4.4078   GACAGGTGCATCATG            CCCCTGTA GGGTA TGCAGGAG            TTTTCCTTGGGAAAG  63 394
        ilvE 5396194 .. 5396205 +  -4.4  -2.54098   ATACATTCTGGTCTG                GGAT GAGC ATCC                 ATGTTGATTGAAGCG  45 174
    AM1_5332 5396343 .. 5396375 +    -4  -3.44888   ATAGTGAAAGTCAAA     CGGGGTAGCCAAACC AATA GGAATGG-TCCCCCG      TTAATATGTTCTTTT  52 37
    AM1_5335 5398017 .. 5398030 +  -2.3  -3.25823   TTTTGGGATGCGTTG               GTTGC GATC GCACC                TTAGTCTCCCCCCGC  45 8
    AM1_5336 NONE
    AM1_5337 5400051 .. 5400081 + -11.3  -3.53012   AGATTCGCACCAGAA      TGTGTAGCCC-CGA GGGA TTGAGGGCTACACA       TTTAAGACAGCACAC  89 49
    AM1_5342 5403825 .. 5403839 +  -5.6  -2.53911   ATTGAACTATTGCCT               AGGCAG AAA CTGCCC               TAAATTGAAGCTTGG  52 44
    AM1_5343 5404601 .. 5404611 +    -4  -2.58686   AATGCAAAGTCCCGA                 TTTG GAT CAAA                 AATTTTCTGTCCCCT  45 89
    AM1_5344 NONE
    AM1_5345 5406180 .. 5406206 + -16.7  -2.66272   ACCAACAGATAACAC         TGTGGATCGGG TTTGC CCCGATCCACA         TCCGTTTCAATCACC 100 286
    AM1_5347 NONE
    AM1_5348 5407792 .. 5407817 +  -8.3  -4.77157   GTAAAGATTCAACAA         GCCCTCAGT TATCGACT ACTGGGGGC          TTTTTACTGCATTAA 100 56
    AM1_5353 5411543 .. 5411567 + -11.4  -4.33258   CTCTAATGCATTGAA          CCCCGGCAGG CGGTA TTTGCCGGGG          TTTGTCTTTAGCCAT 100 368
        msrA 5414348 .. 5414362 +  -3.6  -3.14126   AGGTAGCTGTTCTGT               TCAATG ACA TATTGA               TCTTGAGCTTTATCA  46 309
    AM1_5362 NONE
        pabB NONE
    AM1_5364 NONE
    AM1_5365 5424712 .. 5424726 +    -5  -3.85698   AATTCAATCTAAATT               TTCCAT ACC ATGGGA               TTTGTCGCAAAGAGC  59 289
    AM1_5366 5425548 .. 5425566 +  -2.4  -3.33922   TTGCCCAGTAAATAG             CCAGAG ATGGCCA CTTTGG             GTTTTTCGAAAAACT  45 30
        proC 5426771 .. 5426786 +  -3.2  -3.88232   AAATCAATAAATCGC              TCCAGC AAAG GCTGAA               TTATTGTATCGGGGC  55 324
    AM1_5369 5429475 .. 5429490 +  -3.3  -3.19192   TGTCGAATACGGAAC              TTGAG GCGGGG CTCAA               TTAAGTTACCTCCCA  46 82
    AM1_5370 5430177 .. 5430189 +  -4.1  -3.46068   TCAAGACTGGCTCAA                TGGCA AAC TGTCA                TGTTTCAATTACCAC  52 182
    AM1_5371 5431112 .. 5431128 +  -4.5  -2.63357   TCAGAGTAAGCCTGC              TTTTAGC TAG GTTAAAA              ATCTTTCAGCTAATT  48 16
    AM1_5372 5431910 .. 5431920 +  -3.2  -2.72344   CAATCGCATGGCCAA                 TGGT ATG ACCG                 TAGTTAAGGATAGCC  42 487
    AM1_5374 5434360 .. 5434372 +  -3.3   -5.4505   TGAGCCGCAAAAGTC                TGGGC ATA GCCAA                TTTTTTGTTGCAACG  81 165
    AM1_5376 5436286 .. 5436299 +  -3.9  -3.49048   GGAATGTCTCGCAAA               TTTGA ATTC TCAAA                TCTTCTTCCTTCCGC  52 342
        ccmK 5441922 .. 5441952 +  -6.1  -3.14132   CCAGATTGAGTTCAT       AGAAGTCTTGCCT TTTTT GGGCAAGACATCA       TTCGTAAAGCGAGAG  57 72
        ccmK NONE
        ccmL 5442645 .. 5442657 +  -4.1  -3.90316   GATTCAGTCATCAAT                TCCGA TGT TTGGA                TATTTTTCCCAACCT  57 39
        ccmM 5445306 .. 5445326 +  -4.7  -3.41693   GAACGATCTTGTCAC            TCTTAGCCT AAG AGCCTAAGG            TTCATTGCTGATGCA  55 67
    AM1_5384 5445981 .. 5445992 +    -3  -3.18383   CCGCCTAGGTATTGA                TCAT CGAT ATGA                 TTCCTGCATCCAAAT  46 109
        ccmK 5446814 .. 5446870 +    -6  -3.09866   AGGCAAGATTATCCC TCAGGAGTCGGGAGAGA-TTCTGACAGT GAG ATTGACAGAAGTCTCCCCC-ACTACCGA TAATTGTTGTTTGTT  55 98
        purA NONE
    AM1_5387 5449345 .. 5449360 +  -5.4  -3.28712   GGAGCGTAACCCCAT              CAGAGC CAGG GCTTTG               TTATACCAAGCGCGA  54 258
    AM1_5392 5455277 .. 5455293 +  -3.5   -3.4052   GATTTACATCAGGAA              GCCCCTG AAA CTGAGGC              TTAATTGAATTGAAA  49 5
    AM1_5393 NONE
    AM1_5394 5457628 .. 5457639 +  -2.2  -3.89501   TCCCTTAACCTTAAA                TCTC TTGT GAGG                 TTTATAGCGGTGTTC  52 385
    AM1_5399 NONE
    AM1_5400 5461260 .. 5461285 + -12.7  -5.03314   TACAAATAAAAGTAA         TCCCCTATTGG TTAA TCAATAGGGGA          TTTTTTGGGAATCCC 100 67
    AM1_5402 NONE
    AM1_5403 NONE
    AM1_5404 5464757 .. 5464769 +  -4.1   -3.5394   CACCTACATTGGGGC                GGAGT TTG ACTTC                TTTGAGGGAAGGTTT  52 366
    AM1_5407 5466577 .. 5466617 +  -3.3  -2.87792   GAATAGACCGACAAC  ATGCTTGGGCGATGTATTT AGG AAATTCATTGCCCAATAAA  CTTTCCCTTCATCTT  43 54
    AM1_5408 5467628 .. 5467646 +    -3  -3.77209   TGGCTTTTATTATCG             TTGTAGGC ATT GCCATCAA             TTTCACTGTCTATTT  53 380
    AM1_5410 5468412 .. 5468423 +  -4.4  -2.53345   CATCGAATCAAGCGA                CCAT CAGC ATGG                 GTATTGGTATATGGC  45 199
    AM1_5412 5469680 .. 5469704 +  -9.3  -4.11394   TGGTTTCTGATTGAA          GCGATCGCA AGGCTGC TGCGGTCGC          TTTTGCCCCTGCAAT  78 100
    AM1_5415 5475035 .. 5475063 + -13.3  -3.86524   TGCGATATGTCATTC        TGTCTCCTTTGAA GAC TTCAAAGGAGACC        TTTCTACCGCGGTAT 100 498
    AM1_5417 5475737 .. 5475747 +  -5.4  -3.54721   CCTATGAGAACAGTT                 CCAA CCA TTGG                 TTCTGTGGGATTTTG  57 34
        rpsO NONE
    AM1_5421 NONE
        ccmA NONE
    AM1_5423 NONE
        cruA NONE
    AM1_5432 5489864 .. 5489886 +   -10  -2.65815   ACAGTTGAATTATCA           GATTTAGCTT GTT GAGCTAAATC           TGATATGAGTCTAAG  66 524
    AM1_5439 5499719 .. 5499737 +  -3.1  -2.68775   CCAGGACACCACTAA            GCGTCGGA CTCG TCTG-CGC             TGCATTTGCTGATGG  41 219
    AM1_5442 NONE
         trx 5502030 .. 5502055 +  -2.5  -4.10161   ATTTGCTGCCCTCAA         TGCGGCTCCCCT GCA AGGCG-GCTGTA         TTTTACGAGCTCATA  57 109
    AM1_5444 5502251 .. 5502267 +  -2.2  -3.07307   TCCCTTACCCATGGC              CTAGGG GTTAA CGCTAG              TTCAGTCAGCCTTTC  43 22
    AM1_5445 5503009 .. 5503027 +  -2.4   -3.1886   CAGCTCGGCAATCGT             TTTGGC ATAGGCA GCCGAA             TTGCTACCGTTGGAT  43 256
    AM1_5448 5507800 .. 5507817 +  -4.1   -3.1355   TGATAACTAGACAAA             TGCGG GGTAGGTG CCGCA              TTGGATCTGCATGAA  49 93
    AM1_5449 5509191 .. 5509214 +  -5.2  -4.15006   ACCCTTCCCAACCAT          CCGTTTGCCA ATGA TGACAGGCGG           TTTTGCCCTCAGTAT  66 385
    AM1_5453 NONE
    AM1_5454 NONE
    AM1_5455 NONE
    AM1_5456 5514000 .. 5514017 + -11.3  -3.53444   GGTTGATCAGGCAAG             TCCCCCA CTGG TGGGGGA              TTTAGGGGGCCATCA  89 100
    AM1_5462 5520670 .. 5520690 +  -4.6  -4.42238   CTTAGTGGTGGACAG            GAGGGTGC GCTGG GCGGCCTC            TTTTCCTTGGGCTCG  67 522
    AM1_5465 5522877 .. 5522887 +    -4  -3.90762   ACCAGTTGAGATTGG                 GTAA GAT TTAC                 TGTTTTTCGGAGATC  57 309
    AM1_5470 NONE
    AM1_5472 5531009 .. 5531032 +    -9  -2.52623   GTCAACGGTTTAAGG          CCTGAAG-TGT TGG ACAGCTTCAGG          ATATTGTGGAGGCAG  65 106
    AM1_5473 5531826 .. 5531839 +  -2.3  -4.09551   GAAAGCTGCATAAAC               TCCTG AGGA CTGGA                TTATTTCTAGGATTT  55 28
    AM1_5475 5532636 .. 5532660 +  -2.2   -3.4052   TCCATCATTCATTTC         CCTAGTTTGAT CCGG ATCAC-CTAGG          TTCCTTAAGTTCCAG  45 2
    AM1_5476 5532939 .. 5532956 +  -3.4  -3.41051   AACGGCAAAAAGCTA             GGGTTA CTGGCC TAGCCC              TTGTGATGCCCATCA  49 11
    AM1_5477 5533392 .. 5533421 + -11.7  -6.08342   ACCAACCCTCAATAG       TCAGTATTATTAC GGTC GTGATAATACTGA        TTTTTTTATTTATTC 100 143
    AM1_5478 5535225 .. 5535238 +  -3.7  -3.05384   TGAGCTAGAGTGTAT               CGGGC GAGT GACCG                TTAACTGCCCAGACC  46 145
    AM1_5480 5536699 .. 5536714 +  -4.6  -3.14344   CCCCCCGCATGACTC              GACGGG CAGT CCCTTC               TTGCTCCCAGGCCTG  50 139
        rpoD 5540467 .. 5540487 +  -6.8  -2.84461   CTTAGATTAAAAAAA            GGGCATGG AAGAC CCATACCC            TGATTGGTCTCTGTT  57 36
    AM1_5484 NONE
    AM1_5485 NONE
        dinB 5543596 .. 5543610 +  -2.1  -2.71712   AACAGTTATCGATTG               GGTTT GTCTA AGACC               GTTTGGGCAACCCCA  40 15
    AM1_5487 5544183 .. 5544201 +  -5.2  -3.22521   AAACATCTTCATCAG             CCTTCTGC AAA GCAGGACG             TTCCATTAGTCTAGC  52 173
    AM1_5489 5546479 .. 5546489 +  -5.4  -3.16338   GATTTTTTCGACGAC                 TGGT GCC ACCA                 TCTCTTCATCTACCT  53 256
    AM1_5491 NONE
    AM1_5493 5547830 .. 5547842 +  -4.7  -3.04062   GGCTTGATTTCAGTG                ACCCC TTT GGGGA                ATTTCTGCTTGGCTT  49 217
    AM1_5499 5550123 .. 5550136 +  -9.5  -3.10715   GCATCAATCAATTGG               GCCCG ATCT CGGGC                TTCACTGATGATACG  70 125
    AM1_5500 5552369 .. 5552390 +  -7.3  -3.07575   CAATGCGATGGACCT           GCAG-GCGTG GCG TACGCTCTGC           TTGGCTAGCGATTTT  62 68
        pyrH NONE
         frr NONE
    AM1_5508 5558592 .. 5558610 +  -4.5  -3.17075   TGCCTGGTGTCAATT             GAGATGG GCTCA CCTTCTC             TTAGCTTCAACGGCC  51 24
    AM1_5509 5560475 .. 5560501 +  -7.2  -5.03145   CGGTTTAGATGCTGT         CTGGGTGGAGGG CGA CTTTCCTTCCAG         TTTTTTAGCGAGTTC  88 425
        psbH 5562237 .. 5562254 + -14.1  -5.22006   GTTGATATCCCATCT             GCCCCGG TCTT CCGGGGC              TTTTTATTGTCGTGA 100 94
        tatA NONE
         pth 5563651 .. 5563696 +  -2.6  -4.62336   GTATCAGAGAAGAAG GTTCAACCTTGAGTTTTC CTTAAGTCTT GAAAACCCATGGCTGAGC TTTTTGAACTGCCGT  64 384
       petF1 5564076 .. 5564099 + -13.2  -5.96219   CTTGTGGCTAATGGT          TTGGGGCGTT GTTG AGCGCCCCAA           TTTTTTTTGTCGATA 100 62
        moaA 5565202 .. 5565222 + -10.5  -4.16016   ATACACTAGAAGAGG            CGTACGTTG ATG CAACGTATG            TTTGTTGCCGACTAC  91 59
    AM1_5518 5566135 .. 5566148 +  -5.3  -3.73775   TGGGCCTGAGCTGGA               GACTT CCCT AAGTC                TTTCATCAAGCTGAA  59 224
    AM1_5520 5566837 .. 5566850 +  -4.5  -3.85909   CCCCACGACCGTCAG               CACCT CCTG GGGTG                TTTGAATTTGAGTAA  59 383
    AM1_5526 NONE
    AM1_5527 5575537 .. 5575552 +  -5.4  -3.72632   ATCGTATGTCCTCTA              CTCTGC TGCG GTAGAG               TTGTTGAGTATGTGT  59 63
    AM1_5530 5580586 .. 5580625 + -22.4  -2.78384   TCTCAACATAAAAAT  TAAGGCCGGACTGGTTCT TAAT AGAGCTAGTCCGGCCTTA   TATGGTCGAAAGGGG 100 50
    AM1_5533 5583655 .. 5583686 +  -9.5  -3.76775   GCTTAGCCTTATTGA      CGGCTCAAGGTAA TTTCAT TTTCCTTGAGCTG       TTTAGGTATATTCAA  81 85
    AM1_5534 5584194 .. 5584204 +  -2.6  -4.29304   CTAAAAAATTGCTTT                 TAAT CTG ATTA                 TTTATCTTCTAGTAG  59 230
    AM1_5535 NONE
    AM1_5536 5585479 .. 5585515 +  -6.7  -3.62046   GCACTACCCCAATAA    CCATAATTCCTAACC CAAAGCA GATTTGGAATTATGG    TTATTGGAAAGATAA  65 49
    AM1_5537 5586208 .. 5586218 +  -5.4  -3.08798   GAAGCTTGGCCAGAG                 CCTT AAC AAGG                 TATTGCATCGAAGGT  53 156
    AM1_5538 5587701 .. 5587720 +  -6.4  -3.27525   ATTGGAACTATGCCT            TGGGTTAC TAAT GTAACCCC             TTGCGTTTGGGCGGA  59 518
    AM1_5544 5594478 .. 5594488 +    -4  -2.91144   AAGAAAAGAATTGAT                 TTAG AAT CTAA                 TAGTTTCGAGAATAA  47 110
        dapB NONE
       psb28 5605161 .. 5605173 +  -2.7  -3.17194   AATCCCACGGGCTTG                GGTTT TCG AAATC                TTAGGTTGCGGCCAT  44 9
    AM1_5554 5608095 .. 5608107 +  -5.5  -4.41348   ACTTCAACTCGAATT                TGTCG CTC CGGCA                TTTCTTTGCCGGAGC  70 102
    AM1_5558 5610146 .. 5610167 +  -5.9  -3.65046   GCGGGTAAATAAGGG           TAAACAGGA AATA TCCTGTCTA            TTGTTGAACTAAAGG  61 271
        mnmA 5611477 .. 5611487 +  -3.2  -3.70039   GGTGGAGGCATTATT                 GAGG CGT TCTC                 TTGATTTTGACGTTT  51 11
        chlH 5620145 .. 5620167 +  -9.8  -5.07107   AACCTTAAAGAAAAA           GCGCCCTACT CTA AGCAGGGTGC           TTTTTTGAAGCTTTA 100 55
    AM1_5566 5621337 .. 5621350 +  -2.5  -4.09292   TCCATACATAAAAAA               TAATT GTTG AATTA                TTTGGTTGTTCAATT  57 520
    AM1_5568 5623441 .. 5623451 +  -5.4  -3.53012   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 16
    AM1_5571 5629423 .. 5629446 +  -2.4  -3.68341   ATGTTCAGCAAAAGC          TTGTCTGAAT ACCT GTTCAGTCAG           TTCTTGACTGGGATT  50 220
    AM1_5574 NONE
        grxC NONE
        gshB NONE
        galE 5634707 .. 5634718 +  -5.8  -2.91264   CATAGTTGCCATGGG                CAGC ATAG GCTG                 TATCTGGATAGCGAA  52 394
    AM1_5582 NONE
    AM1_5583 5644375 .. 5644389 +  -7.8  -3.00786   GGTGGTGAACGTGAT               GGGCAG AGC CTGCTC               TATATGCATTTTCGA  60 472
    AM1_5585 5645756 .. 5645776 +  -6.8  -2.80988   TAGTGGGTAGATAGG            CTAGGGTC ATTAA GACCCAAG            TGATTAATCCTGTAA  54 350
    AM1_5589 NONE
        recQ 5651477 .. 5651487 +  -2.4  -2.80443   AGATCGATGTTGACA                 GTGG ATG CCCC                 TGTAATAGAATCTGA  41 41
    AM1_5592 5651971 .. 5651985 +  -4.2  -3.74872   CTTCTTGTAATAGTA               GGTCTA TTT TTGACC               TTTACTCGAATAAGT  57 135
    AM1_5593 5652878 .. 5652903 +  -6.9  -3.16564   CATTATTCGAAAGAT         TTGGGCGCCTGT GGG GCAG-CGTCCAA         TTGCTGAGGTGGACC  59 125
    AM1_5594 5653313 .. 5653351 +  -9.7  -3.63627   TAAAGCTCTAACTAT  CCTGTATAAG-CCTGCGCT TTG AGCGCAGGACTGGT-CAGG  TTTCACCTATACCGC  80 4
        mutS 5656651 .. 5656662 +  -2.2  -3.55071   AAATAGCCCAGTATC                CCTA ATTG TGGG                 TTTGCAAGGGTGTCA  47 62
    AM1_5597 5657442 .. 5657460 +  -2.3  -3.60098   GAGCAGCTCTTATAC             CGGGCTA AAGTG TCGCCTG             TTTGAGATGAAAAGT  49 2
    AM1_5598 NONE
        recJ 5660138 .. 5660165 +  -4.8  -3.76224   CAGCAGGATCCTGAT        GATGCGAT-GCCC TAG GTGCGATCGCAAC        TTTCCTCCCTCCACA  59 11
    AM1_5600 5661680 .. 5661690 +  -5.4  -3.33865   GAATGGTAGTGAGAG                 GCAA GTG TTGC                 TATTAATTTCAAATG  55 524
    AM1_5604 NONE
    AM1_5606 5669698 .. 5669712 +  -4.2  -4.18018   TAAAGCATCTACAAC               CGTCTC GCA GGGATG               TTTTGCCTCGAAGAA  62 184
        clpS 5673546 .. 5673572 +    -3  -4.56775   TCTTAATTCTTCATA         GTTTTTGGAGGT TGC AACATCAAAAAC         TTTTTGAACAACCCT  65 425
    AM1_5614 NONE
    AM1_5616 5676623 .. 5676637 +  -4.3  -3.31726   CTCCACATTAAACAT               CGATT GGCCA AATCG               TATTGTCTGAAAGGA  51 78
    AM1_5617 NONE
    AM1_5618 5678373 .. 5678383 +  -4.6   -3.6682   TCGCCAGGTGCGGAA                 CGGC AAA GTCG                 TTTACGTGCCTGCAA  57 72
    AM1_5619 5680085 .. 5680096 +  -4.4   -2.8462   TTGAATAAGGTATTC                TGGA TCTT TCCA                 CTATTTTGGTGCCTT  46 60
        argF 5681070 .. 5681088 +  -4.5  -3.60792   AGCTAGCGTGTTAGG             CGCTAAG ATCGA CTGAGCG             TTTGGCGATTAAGCC  57 10
    AM1_5621 NONE
    AM1_5623 5684632 .. 5684646 +  -5.6  -3.40498   GCGACTCGCCGATCT               CGCTAG AGC CGAGCG               TATTGTTCAGACTTG  57 20
    AM1_5624 5686271 .. 5686288 +  -4.1    -4.371   CAGGGATATCACTAA             CTGATAC CGAC GTAGCAG              TTTTAATATCATCGA  65 461
        lytB NONE
    AM1_5631 NONE
        fabG 5693660 .. 5693670 +  -2.4  -3.23945   AGAGATAGGATCGCT                 GTGG CGT CCCC                 CTTTATTGTGTAGTA  45 58
        accA NONE
    AM1_5634 5695753 .. 5695769 +  -3.7  -3.84406   TGATGCCGAACGCGG              GGACATT CTA AATCTCC              TTGTTGTCATCAACC  56 15
        folE 5696593 .. 5696612 +  -6.4  -3.11291   TGATACGCTTTTGTT            GA-GGGGGG ATT CCTCCCATC            TGTTGGAGTTATAGA  57 95
    AM1_5636 5697531 .. 5697583 + -11.2  -3.49878   AGGTAGGCGTCAAAG CGGCGGCGGTTGGC-GACCTGGGTG ACAT CATCCAGGGCAGCTAGACGCTGCAG TTCTAAATTTGCTTG  79 471
    AM1_5639 NONE
    AM1_5640 NONE
    AM1_5642 NONE
    AM1_5643 5709136 .. 5709148 +  -4.1  -4.49337   GTGTTGAGGCGTGAT                CGTTG CAC CAATG                TTTTCGTTGGTATTG  68 504
    AM1_5645 5710641 .. 5710687 +  -2.5  -4.72188   TGAATGATCACCTCA CTCCTGTGGAAT-GG-TTTGACT TGC ACTCAAAGCCTATTCTGCAGGAC TTTCTTTTGGGTTAG  64 102
    AM1_5646 5711420 .. 5711438 +   -16  -5.86061   TTCTCTCAGTCAGAG             GCCCCTGC ATT GCAGGGGC             TTTTTTTTGATGGCC 100 66
    AM1_5647 5715825 .. 5715842 + -11.3  -5.96219   TGAGTCGATTTAGGA             GAGGAGG GAAA CCTCCTC              TTTTTTTTCTGCATG 100 55
    AM1_5649 5717099 .. 5717128 +  -6.4  -3.16676   CGCAACAAGCAGCAA       CCCATCGCAC CAAGGAAGCA GAGCGATGGG        TATTGAGTTGGTCGA  57 317
    AM1_5651 5719791 .. 5719811 +    -4  -4.43309   TCCACAAACTGACGA            CCACAGGT TTTAC ATTTGTGG            TTTTGCTTGCCATTA  66 512
    AM1_5653 5720234 .. 5720245 +  -2.2   -3.3341   ATAAATTACAAAGGG                CGGT ATGT ATCG                 TTCTAGCCGATTTTT  45 50
    AM1_5654 NONE
    AM1_5655 5720981 .. 5721010 +  -7.1  -4.80882   TACTGTTATTTTGTA       ACTCCCCTGCA GTTGACGA TGCGGGGGAGA        TTTTTGATGTGCGAT  85 62
    AM1_5656 NONE
    AM1_5657 5722595 .. 5722605 +  -5.4  -3.55262   CGCTCTGCTCTCAAA                 GCTA AGC TAGC                 TGTTTGATTGAGCTT  57 8
    AM1_5663 5728110 .. 5728134 +  -6.6  -4.34402   TTTAGTAAAGCGATG         C-CCTATAGAT TGAT ATCTATAGGCG          TTTTGCTATGGAAAC  74 63
    AM1_5665 NONE
    AM1_5667 5732809 .. 5732834 + -13.5  -3.65199   TTTTACTCAAAATAG         CAGGAATTTTG AAGT CAAAATTCCTG          TTTGGATAGGAAGTT 100 197
    AM1_5668 5735754 .. 5735764 +  -5.4   -3.5032   TTTCTGATGTAGCCC                 CATC TGC GATG                 TCTTTAATCTAGGCG  57 327
    AM1_5672 NONE
    AM1_5673 5738468 .. 5738501 +  -9.6   -2.7728   CGCGTTATTCAGCTT     GGCCCCATTGAGGT TGGTGT ACTTCAGTTGGGCC      TGCTTCAGCTTTGCC  68 236
    AM1_5676 NONE
    AM1_5677 5742412 .. 5742426 +  -3.6  -4.77079   TGGAAGCAAGACCAT               TAGTTA GTT TAGCTA               TTTTATTGATATATC  70 19
    AM1_5678 5743656 .. 5743674 +  -3.8    -3.484   GGTCATATCCTTTAA             CCCTTTAC TTA GTGAAGAG             TTCTAATGTGCTCAA  51 130
    AM1_5682 NONE
    AM1_5683 5748297 .. 5748313 +  -5.1  -3.81259   AAGAAGTAATAATAC              CTTCATG CGT CAGGAAG              TTTAATGCGTTATAT  61 265
    AM1_5685 NONE
    AM1_5686 5750822 .. 5750838 +  -2.3  -2.93449   CGCAATTGCACAAGT              CAATTTT AGG AAATTTG              GTTTAGGTTTATGCT  42 17
    AM1_5687 5754068 .. 5754086 +  -6.6  -2.84587   TTGTATTGGCTGTCA             TGGCCACA ATG TGAGGCCG             ATTCGTTTTATCCCA  54 269
    AM1_5689 NONE
    AM1_5690 NONE
    AM1_5691 5759941 .. 5759951 +  -6.8  -3.07029   GGAGGTTGCTCCTCA                 GTCG GGG CGAC                 TCTTAAAGATGTTTA  58 121
        dnaK NONE
    AM1_5693 NONE
    AM1_5695 5765007 .. 5765017 +  -3.2  -3.30124   CAGATACCTGCAAAT                 GCTG GTC TAGC                 TTGTCGCCCATGCGA  48 85
    AM1_5697 5768579 .. 5768602 +  -3.7  -3.62275   ATACACCGTACCGTT          CTGCCCAGC AATTTG GCGGGGAAG           TTTGAGGTGGTCGAT  53 85
    AM1_5702 5775166 .. 5775184 +  -5.2     -3.24   ACATATCGGCAGGCA             TAGGCGGC ACT GCGGTCTA             CTTTTGTGGGATCCT  52 389
    AM1_5704 NONE
    AM1_5705 5782489 .. 5782509 +  -7.5  -3.30243   GGCTTGAGCCAACTT            GAGGGCTTT GGC AAGGCCCAC            TTCTGAGCCATCAAT  62 456
    AM1_5708 NONE
    AM1_5709 NONE
    AM1_5710 5786322 .. 5786353 +  -4.8  -4.54727   TCTATTTGCTAAATG      CAATA-AATTTTTAT TGG ATAAAAATTGTGTTG      TTTTAGTTTAAAGGG  68 167
    AM1_5711 5790186 .. 5790200 +  -5.6  -3.41988   GGTCGCCCCCTCCGC               CCACTG ATT CAGGGG               TATTGTTAGATACGA  54 80
    AM1_5730 5811464 .. 5811485 +  -2.9  -3.39784   CCTAAAATCGGCTTC           G-GAGCGGGT TTG GCCCTCTCAC           TCTTCTTACCCATCG  46 128
    AM1_5731 5812961 .. 5812974 +  -3.7  -4.27467   TCACCCATCACACTT               CCGAG TATG CCCGG                TTTATTCAATTGTCG  63 269
    AM1_5735 5815622 .. 5815635 +  -2.4  -3.67976   AAGTTCAAAGATGCT               TGAG TTTTAC CTCA                TTTGAAATTAATAAA  49 220
    AM1_5738 5818729 .. 5818744 +  -4.6   -2.7263   TGTTATCGAAACCCG              ACAGGC CCAA GCCTGA               GTTTGCAGCCCTAAT  48 61
    AM1_5741 5821194 .. 5821210 +    -3  -2.84602   GATCGTCGGGTTGGG              GCGATT CAGCA AATTGC              ATTTGATAGGCTAAC  42 273
    AM1_5747 5825452 .. 5825469 +  -5.5  -3.53012   TGCTAATCCAAAGGT             GTCTTGG TCAT CCACGAC              TTTCCAAAGGGGACG  57 35
    AM1_5748 NONE
         gmd 5828199 .. 5828209 +  -2.6  -4.13014   TGAATAAATCTGCGT                 TTTA GGC TAAA                 TTTTAAGCCTGTGGA  57 34
    AM1_5750 NONE
    AM1_5751 NONE
    AM1_5752 5830715 .. 5830738 +    -6  -2.53263   GGTCTCAAGCAGCAA          TGGCTTGAGT AATA GCTTGAGCCA           TCGCTTGGGAATCAA  52 41
         icd 5834266 .. 5834283 +  -2.1  -3.81322   GAATTAAGTCCTGGT             TTTAA-GG AGA CCATTAAA             GTTTTTTGTCGTTAC  51 72
    AM1_5756 5834915 .. 5834930 +  -5.4  -3.66772   CTTTTGCACCGCTTG              GGCAAT GGTT GTTGCC               TTCTTGAAGGTTTCG  59 470
    AM1_5757 5837243 .. 5837253 +  -8.2  -3.16564   TAGTTTGAATCGGCT                 GGGC ATA GCCC                 TGTTAAATTGCCTTA  67 88
        glpX 5838485 .. 5838498 +  -2.3  -3.46234   GCACTTCAGTTACAT               TAGGC GATA GCCTC                TTAATTCTGAAGTTT  47 23
        hemA 5840246 .. 5840268 +  -4.9  -4.73448   TCAAGGTGGGGAATT           GTTCACTTA ATTTC TGAGTGAGC           TTTTTGAGTATCTCT  73 411
    AM1_5761 5842407 .. 5842417 +    -4  -3.14931   GGTGCTTACTGAATG                 TTCT AAG AGAA                 TTAATCAGCAATGGA  49 49
    AM1_5762 NONE
    AM1_5763 5844654 .. 5844668 +  -4.2  -2.72977   TATGTGGTGGCAGCC               CTCAAG GAG CTGGAG               TAATCTATGTGCGGT  45 8
        asnB NONE
    AM1_5765 NONE
    AM1_5766 NONE
    AM1_5767 5849898 .. 5849916 +    -6  -4.44915   ATGCAATGAAAGAGG             GTGGTTGG AAT TCAATCAC             TTTTATGCATAGTTA  73 269
    AM1_5769 NONE
    AM1_5770 NONE
    AM1_5771 5853312 .. 5853322 +  -2.6  -3.60395   TTATTAAATTTATAT                 TATT CTC AATA                 TTGGTTATTGTATGC  50 34
    AM1_5772 5854600 .. 5854616 +  -5.3  -2.85257   TGATAGTTCACAGAA              TTTTAAT AAT ATTAAAA              ATTATCTGTTTGAGA  50 173
    AM1_5773 NONE
    AM1_5774 NONE
    AM1_5775 5858244 .. 5858255 +    -3  -3.62597   TCAGGACGGACTCAT                TGAA CATA TTCA                 TTGTTAAAGCATCAG  51 424
    AM1_5777 5859230 .. 5859244 +  -4.3  -4.02534   CAAGTTTAAGCTTTG               GTACT GATTG AGTAC               TTTGTAGGTTTAGGT  59 127
        ccmK NONE
        purH 5861490 .. 5861505 +  -4.6  -4.20516   TAACCCCTCGACGTC              CAGGCC GAAC GGGCTG               TTTATTCAGTAAGGC  64 127
    AM1_5781 NONE
    AM1_5782 5865165 .. 5865192 +  -4.2  -2.78463   AACGAAGCTTAAAGT        CGGTTCGATT GATTTCCA AATGGAACCG         TCTCATCCGAAAAAT  45 271
    AM1_5785 NONE
    AM1_5786 NONE
        mraY 5870851 .. 5870875 +  -4.9   -4.3586   ATACCCCGTAGCCGT          GCAAAACACTG GAC CGGGGTATTGC          TTTTGGTATGGATAA  67 74
    AM1_5789 5873801 .. 5873824 +    -9  -2.64794   AGGATAATATTTGGC          CAGG-ATGTTC ACC GAACATTCCTG          TCCTATCCCATTGCA  66 44
        hisF 5874667 .. 5874692 +  -3.5  -3.01074   TGGTGGATTAGTCTT         TAATTTTATTA AAAT TAGTAAAGTTA          TGATTATTCTGCTTG  46 73
    AM1_5791 5875301 .. 5875322 +  -5.9  -2.66395   AAGCCTCAAAGGCAA           TACCTGAGA GGAT TCTAAGGTA            ATTATCATCGTGCAT  52 383
    AM1_5793 5875944 .. 5875972 + -13.2  -4.82863   CCCGTAGATTAAAGC        CCCCTGCTAGTT TTGAT GGCTAGCAGGGG        TTTGTTTTATCGTTG 100 76
    AM1_5799 NONE
    AM1_5800 5883042 .. 5883059 +  -2.7  -4.49838   ATCCTTTAGTATGTA             GAG-GTGG GGA CTACACTC             TTTATATTTGTTCTT  61 74
    AM1_5801 5884412 .. 5884436 +  -7.9   -5.1925   ATATATACCCTTTCA          GGGATTCCT AGATTTC AGGAGTCCC          TTTTTTAGCTTATAA  95 209
    AM1_5804 5885759 .. 5885786 +  -4.8  -3.36327   CCTTCGAGGGGGTGG        CTGATTGGAGGGC AAT GCCC-CCAAAAAG        TTCTCAATCGCCTGG  52 64
    AM1_5806 5889673 .. 5889696 +  -9.6  -2.64595   ACCTTCTCCAAGAAC          TCTGGCTTGG CAGG CCAAGCGAGA           ATTATCCTGGCAATT  66 403
    AM1_5809 5891254 .. 5891265 +  -4.4  -4.62069   ATGGCGGTTGCGGCA                TACC GCAA GGTA                 TTTTTCCGATCCCGA  68 281
    AM1_5816 5895727 .. 5895738 +  -3.6  -2.52464   GACTACAAAGTTGGT                GGCC AAAA GGTC                 TGAGTTGAAGCAACA  44 65
    AM1_5818 5897637 .. 5897651 +  -4.2  -3.29727   CGCCACTAAGAGATG               TGCCGT TTG ACTGCA               TCTTCATTGCTTAGC  51 75
    AM1_5819 5898543 .. 5898555 +  -9.1  -3.57387   ATCAAGGGAGTGCAG                CAGGG TAC CCCTG                TTTGGCCAATATCTT  75 370
    AM1_5820 NONE
    AM1_5821 NONE
    AM1_5822 5900929 .. 5900947 +  -3.8    -3.137   TTATCGGATATCTAT             TTTCCTCT TTT GGTGGAAA             TTCAGTGCTATTCCT  48 50
    AM1_5823 5901287 .. 5901307 +  -7.6  -4.19624   ACGCTTCATCGCTCT           CAGGGCCTC TTTC GAG-CCCTG            TTTATATTGCCGCTG  76 261
    AM1_5824 NONE
    AM1_5825 5903297 .. 5903320 +  -4.7  -2.51702   CATCCGATCTTGCTA          GATTTTGTA TAGCAC TACGAAATC           GTGTTAGTACTATTG  47 102
    AM1_5828 5904779 .. 5904792 +  -6.7  -3.26449   TTGGGGAGAGTAGTA               CTTGG GTAG CCAAG                TTAGATTATCTCAGC  61 28
    AM1_5830 NONE
    AM1_5831 5906858 .. 5906871 +  -3.1  -3.27029   TGAACGTCGTCGAAG               TCGTT TGCT AACGG                TCTTGATTGCTGCGA  47 15
    AM1_5832 NONE
    AM1_5833 NONE
    AM1_5834 NONE
    AM1_5835 NONE
    AM1_5836 5909258 .. 5909293 +  -6.2  -4.38369   AATTTTAGCTAGGTG    CTTAAGACAGCCTATT TGGC AAGCGGTTGTCTTAGG     TTATTTCTTTGGTTG  72 29
    AM1_5838 NONE
    AM1_5839 5911137 .. 5911150 +  -2.3  -2.78586   CCCTTATTTTCAGAG               GATCC AGGA GGAGC                GTTGATTTGATTTCA  41 7
    AM1_5840 NONE
    AM1_5841 5912643 .. 5912663 +  -3.9  -4.54205   CTTTCTCCTCAAGCG            CTGTGAGGA AAT TCAGCACAG            TTTGTTTGGTCTCCT  68 454
    AM1_5845 NONE
    AM1_5847 5915971 .. 5915985 +  -4.3  -3.97911   CTCTGGGAATTAGCG               TGTAG CAGTC CTACA               TTTAGTGTGTTTCCT  59 352
    AM1_5848 NONE
    AM1_5849 NONE
    AM1_5850 5919403 .. 5919420 +    -4  -3.17723   CCCCGTCTGCTTGTA             ACGGGG AATGCA CCCCGA              TTAGATTCAAGATAA  49 178
    AM1_5856 5921984 .. 5922002 +  -9.6  -3.53444   ACTGCCCCCTTGTTC             CGTCACTT GAT AGGTGACG             TTTAACAACCAATAC  74 353
    AM1_5865 5929005 .. 5929030 + -10.3   -5.8187   GGCTTAGTTCGGTTT         GGGTCGGGACC TTTG GGCCTCGGCCC          TTTTTTTATTGGCTG 100 34
    AM1_5866 5929847 .. 5929868 +  -5.1  -3.40558   AACTCGTTACTGTTT           GCATAATGG CGTC CCGTTCTGC            TGTTTCCAATCTATC  54 345
    AM1_5870 5931912 .. 5931923 +  -5.8  -2.61681   GCGCTGCCTAAATCT                GCTC TGGG GAGC                 CTTCTCCCCTTGCCC  52 225
    AM1_5871 NONE
    AM1_5872 5932653 .. 5932693 +  -5.4  -5.38047   CGTACCTAACGCAAC TGCACT-GCCTGAGGCAGC AAGG GCTGCCTCAGGTTAGAAGA  TTTTTTGTATCCATA  84 32
    AM1_5873 5933743 .. 5933755 +  -3.4  -2.80796   GTCAGAGCCATCTCT                TCCT CGATA AGGA                CTTTCAATGCTAAGC  43 109
    AM1_5874 5934079 .. 5934094 +    -4  -3.28712   GATTTGGCTCAGGAG              CT-AGCC CGT GGCTGAG              TTATCGACACCGCCA  51 11
    AM1_5875 5934819 .. 5934843 +  -7.9  -5.08824   ATATACATCCTTTTA          GGGATTCCT AGGTTTC AGGAGTCCC          TTTTTTAGGTCAAAA  95 261
    AM1_5878 5938059 .. 5938090 +    -3  -3.08088   GTGCCGTTATGGAAT      CAGTTACACTTC ATTACTTC GAAGGGTCACTG       TGTATTCCACCATTT  46 121
        bphP NONE
    AM1_5895 5957294 .. 5957306 +  -4.1  -3.74693   CCTTAACCAATCCCT                TCAGT CCC ACTGG                TTTGGTGACATACGC  55 130
    AM1_5898 5961006 .. 5961023 +  -4.1  -3.55563   AGCAAAGGTGTCTCC             CATTGCC CCTT GGAAATG              TTTGGCCAATCGGGT  52 401
    AM1_5900 5962156 .. 5962170 +  -6.4  -3.84394   GGGGCTCTTCTCCTC               TTGCGG TTA TCGCAA               TTTACCTTCTGTCTG  65 48
    AM1_5901 5962737 .. 5962747 +  -6.8  -3.18912   AAAAAACTAACTGTG                 GGCA TAC TGCC                 TTACTAGCTGGCTGA  59 64
    AM1_5903 5964791 .. 5964808 +  -5.5  -3.92542   CCATATTTAATCGCC             TGCCTAG CCCC CAAGGCA              TTATTTACCGCTACC  61 428
    AM1_5907 NONE
    AM1_5908 NONE
    AM1_5909 NONE
    AM1_5910 NONE
    AM1_5911 NONE
    AM1_5912 5979157 .. 5979167 +  -6.8  -3.21747   CAATCCCGAGATTAA                 TCGG ACG CCGA                 TTCCTGATCGGATGA  59 70
    AM1_5915 5980960 .. 5980972 +  -4.1  -3.23975   AGAGCTTTCATTTCC                CACTT CAT AGGTG                TCCTTTTTAAGAGCT  51 266
    AM1_5917 5981452 .. 5981464 +  -4.1  -4.54727   AAAAAAGCGCCATCC                CAGTT GTG AGCTG                TTTTAATTTGCGAGA  68 132
    AM1_5922 5989499 .. 5989525 +  -4.4  -2.62396   TCCTCAAAAATAAAA         TGTTGTTGGAGA GTG TCCTCAACAACC         TCATCTCCCAAGGTA  44 251
    AM1_5926 5993550 .. 5993561 +  -2.2  -3.61894   ACGACCAAAATATTT                GACT TTAG GGTC                 TTATTCGGCAAAGTT  50 242
    AM1_5927 5996220 .. 5996233 +  -3.8  -3.15249   TCCCATCTCCGAAAA               GCCT TTTCGT AGGC                TTCATCCCCAGTGTG  48 224
    AM1_5929 NONE
    AM1_5930 5998363 .. 5998401 +  -6.1  -4.27316   AGCTAATCAAAAAAA  TGCCAGATTGATCAATCC GCAT GGGGT-ATCAACCTGGCA   TTTTAAGTTGGAACA  72 113
    AM1_5934 6003197 .. 6003212 +  -4.7  -2.75498   AAAGCCTCAGATATA              CAGGA CACTTC TCCTG               CTTCTCTATCAGATC  49 514
    AM1_5940 NONE
    AM1_5942 6008570 .. 6008600 +    -4  -3.66896   AATCTGATCCGACAG       TCCCCAACCC AAATAGATCAG GGGTTTGGGA       TTCTCTATCTGTAGC  55 353
    AM1_5943 NONE
    AM1_5944 NONE
    AM1_5945 NONE
    AM1_5946 6012269 .. 6012285 +  -4.5  -2.80699   AGTTTTCATTGCCCG              CTATGTT GGA AATATAG              TAGTATTGCTTGGCA  49 450
    AM1_5947 NONE
    AM1_5948 6013347 .. 6013358 +  -4.4  -3.64703   GATGCGATCGCAATA                CTTC TCAT GAAG                 TTTGGCTGCCAGCGG  55 444
    AM1_5953 6016091 .. 6016106 +  -4.8  -3.21062   GACTACAAAATACTC              TTTTCA AAAC TGAAAA               TTGAATCTTGGTATG  51 350
    AM1_5958 6021490 .. 6021507 +  -4.1  -2.85896   TAAACACATGGCAAT             GCCTTTT TCGT AATAGGC              TGCTTCATTGATAAA  45 128
    AM1_5960 6024035 .. 6024046 +    -3   -4.1822   ATAATGAGAATTAGG                TGTA AAGA TACA                 TTTCTTGCAATGAAA  58 180
    AM1_5961 NONE
    AM1_5962 NONE
    AM1_5963 6026815 .. 6026826 +  -5.8  -3.08471   TTGGAGAAGGGCAGT                CTCG ATAT CGAG                 TTGGCTGAGATTCTC  53 76
    AM1_5967 6030696 .. 6030724 +  -2.5  -3.55254   TTCTTGCGCTTCTAC        TCCTGAAAAGA AGTCTTG TCTTTCTAGGA        ATTTTTATCGTGATA  48 367
    AM1_5968 6033952 .. 6033962 +  -6.8  -3.52192   ACTCCTGATCCTAAT                 GCTG CAA CAGC                 TTATATACAGTTAGG  63 508
    AM1_5969 6037822 .. 6037850 +  -4.5  -3.06302   CTTGGCTAATTCAGC        CGCTATCAGTTGA CGC TCTGCTGATGGCA        TTACCTCAAACTCAT  49 331
    AM1_5976 NONE
    AM1_5977 6055423 .. 6055441 +  -3.1  -3.35775   AATTAATTGGATTGC             GTCAGGA TAACC TCATGAC             TATTTCAAACATCAT  47 195
    AM1_5978 6056602 .. 6056626 +  -7.1  -2.72511   TCATCTCAGTCCGCC          GTAGATCAGTC CCG GACAGATCGAC          ATTTGCCAACATACC  56 470
    AM1_5981 6059504 .. 6059519 +  -7.6  -2.79679   TTATCGATACCCGCT              TCGTCT ACAT AGACGA               TCTGATGAGGGTGTT  61 524
    AM1_5984 6060749 .. 6060773 +  -3.6  -3.37537   ACAGACCATCCACTA          GATATTGCAT GCAAA GTGCAAAATC          TTCGCTTTTGCGATG  49 367
    AM1_5987 6063215 .. 6063229 +  -2.8  -2.79878   GGCTCTTTATACAAA               ACTTCA GTA TGAAGC               GTTTCGATGGGTAAA  42 388
        amiE 6070999 .. 6071019 +  -6.1  -5.10516   AGTTAGATTCACTCC            AGCCTATGT TCT ACGTAGGCC            TTTTCTTTGCTTTTT  87 275
        fmdA 6072700 .. 6072733 +    -9  -3.68504   GTTCTTCTCCTCAAT     GATTGAGTGCTGAG TCAGTT TTCAGTGCTCAATC      TTCTCTCGTTTCTTA  75 72
    AM1_5995 6073052 .. 6073065 +  -3.8  -2.56164   AGTCATTCCCCCGCT               CGGT ATTAAC ACCG                CTCTTCCTTCATACT  44 17
    AM1_5996 6074849 .. 6074863 +  -2.9  -4.73677   AAGCTAGCTATGAAT               TTACT TTATT AGTAA               TTTATTTATTGTAGG  64 156
    AM1_5997 6080953 .. 6080973 +  -3.3  -3.18264   CTTGCTATCTGTGCT            GAATAAATG CCC CATCTGTTC            TTGATACATGGCCAG  46 174
    AM1_5998 6081487 .. 6081519 + -10.1   -4.7173   GCTTCCGATATGGAA      TAGCACTATATCTAT TTT ATGAATATAGTGCTA      TTTTTGAATATAGTA 100 23
    AM1_5999 6082030 .. 6082055 +  -7.7  -3.46304   GCTATGCCAAGGGAC         TTGCCAGTCTGA TAT TCAGA-TGGCGA         TTGCTGTATTTTGGC  68 169
    AM1_6000 6083015 .. 6083038 +  -7.4  -3.35996   ATCCGGATCAATAAT          CATGTAGGGG GGTT CCCCAATATG           TTCTGGATAAAACTG  62 214
        isiA 6086018 .. 6086059 +  -7.3  -4.91109   TGAATAAGAGCGCCA CGGTAAGAGCGTGAA-CAAC CTG GGCGCTTCACGCTCTTGCCA TTTTTATCGTAACGA  85 75
        isiB 6086637 .. 6086659 +  -9.1  -3.29109   AGGGTTCCAAAAGCC           GGGTCAGGG CTTAT TCCTGGCCC           TTCATCTCCCCTTTT  71 39
    AM1_6005 NONE
    AM1_6006 6088287 .. 6088297 +  -4.6   -3.3782   GAGGGAACCCCAAAG                 GCCT TAC GGGC                 TTGATTGGCTCCATC  52 237
    AM1_6013 NONE
    AM1_6014 6096791 .. 6096811 + -12.7  -3.36823   TAATTGCTTGATGCA            TCTCTCTTG ATC CAAGAGAGA            TTGGGTTTTGCCGCC  95 38
    AM1_6015 6100777 .. 6100793 +  -2.9  -2.87931   GATAAGTCATTAAAT              GGAGAAG ATT CTTTACC              TATATGCAAGCTCCC  42 52
    AM1_6016 6101741 .. 6101760 +  -5.8  -3.19192   CAAGAGAATTCAAAA            GTTAAAGT ATTG ACTTTAGC             TTGACTTGAATAGAC  55 124
    AM1_6017 6102024 .. 6102071 + -22.4   -3.2794   ACATCACAGGTGTGA TTAAATATTGGTAAGCCTCCGG CTTG TCGGGGGCTTACCAATATTTAG TTAATATGAATAAAA 100 12
    AM1_6019 6104265 .. 6104282 +  -3.4  -3.76952   TCATCAAGGTAGATT             CAGTGA ACTTGA TCGCTG              TTTAAATTGGCTCGG  53 373
    AM1_6020 6105466 .. 6105478 +  -3.3  -3.53298   AACGGCATCGATACG                GAAGG CAA CCTGC                TTGATTTCAACTGAT  49 160
    AM1_6021 NONE
    AM1_6022 6108116 .. 6108132 +  -6.6  -2.78216   TAATAAGTGGGTCGC              CCTTGA GCTGA TCAAGG              TGGTTAATCAGGATG  57 15
    AM1_6023 NONE
    AM1_6024 NONE
    AM1_6025 NONE
    AM1_6026 6110091 .. 6110102 +    -3  -4.51477   AAAACTATCTGTAAG                TAGA AAAT TCTA                 TATTTTTTTATCTCT  65 395
    AM1_6028 6111646 .. 6111657 +  -5.8  -4.24342   GAGGTGGATCAAACA                TGCG ATCG CGCA                 TTTGTTCATAAAACA  69 473
    AM1_6035 NONE
    AM1_6036 6119782 .. 6119800 +  -3.1  -3.61536   AGCGATTGTCTTAGC             TGTCAAG CTCCC CTTGCCA             TTTCGGGATTCCATT  51 103
    AM1_6038 NONE
    AM1_6039 6123887 .. 6123897 +  -3.2  -3.24188   TTGCCATAGGTACGC                 CAGT ATA GCTG                 TTGATAATAATCTAG  46 220
    AM1_6043 NONE
    AM1_6044 6127430 .. 6127454 +  -5.8  -4.42386   TCTTCCAAAAGAAAA          GAGGTAAG TTTATACGT CTTACCTC          TTTTGTAGATAGCAG  73 124
    AM1_6046 6129152 .. 6129177 +  -8.4  -3.57309   ATCTCCGGTTAAGCC         GAGAGGGA-AG CGTCA CTATCCCTCTC         TTTGCAAAGGTTTTA  73 85
    AM1_6047 6131685 .. 6131705 +  -4.7  -4.16016   AGAGAGCTACTTTTT            GGGTGAAAT GAA ATTCTACCC            TTTGTTCAGGAATCC  63 340
    AM1_6054 6138857 .. 6138874 +  -3.3  -3.68569   TGCTTCCACAGTGGT             TGGGGGA AATT TCACCCG              TTCTTCAATGCGTAA  53 405
    AM1_6057 6144337 .. 6144351 +  -7.2  -4.13945   CCTGACTTTTCACGG               TAACTC CTG GAGTTA               TTTTCCCATAGAGGT  73 76
    AM1_6058 NONE
    AM1_6059 6146023 .. 6146033 +    -4  -2.87881   TGAGTTGTGGCCTCC                 TAGT TCC ACTA                 TCTATGAGCCCCTTC  46 86
         hdc 6147901 .. 6147911 +  -3.2  -3.51032   AGTCTTTATTGTCAC                 CAGC TAG GTTG                 TTCTCATTAAACACT  49 54
    AM1_6061 6148806 .. 6148836 + -11.3  -2.78935   CGCCCCTCCTTCTGT       CGGTTCATCCATA TCATC TGTGGATGAACTG       TCTACTGGAGCCTCT  74 410
    AM1_6064 6151763 .. 6151776 +  -2.3   -4.9725   TCCGCTTTTGCTCCT               GCACG TTGC CCTGC                TTTTTCTCTGGCGCT  70 151
    AM1_6066 6154584 .. 6154594 +    -4  -3.83998   GTCTTGGCTCTGTAG                 TTGA ATA TCAA                 TTTCATCTCCAATAC  57 489
        crtL NONE
    AM1_6078 6168794 .. 6168820 +  -2.2  -3.64703   TAGAAAAGCCTGATG         TCGATCATGGAT GAG GTCAATGGCCGA         TTTGGGTGAGGGACG  49 121
    AM1_6079 NONE
    AM1_6080 6169825 .. 6169844 +  -2.8  -2.98823   ACCAATTCAAGGTTG            ATTGACCA AAAC TGGTCGAG             TGTATGTGACGACAA  43 25
    AM1_6081 6170109 .. 6170124 +    -9  -3.60296   TCTAGGGAGATGTGG              TCCCCA GAAG TGGGGA               TTTAAGGTGGGGGTA  75 165
    AM1_6088 6179602 .. 6179616 +  -2.1  -2.60496   ATGCGAAAGAACAGA               TAGCG AGGGC CGTTA               ATATTTCCACCAAAG  39 76
    AM1_6092 6182537 .. 6182548 +  -5.8  -3.06183   AACGATCCGTTCGTG                CTCG GCGT CGAG                 TTCCCTGAGCATCCA  54 437
    AM1_6094 6183813 .. 6183823 +  -4.6  -3.46872   CCCGTCATATAGAGA                 CCGG GAA TCGG                 TGTTTGAATCTTCGT  55 330
    AM1_6096 6186063 .. 6186076 +  -3.8  -2.62396   AAAGTGAGGAGTAGG               GCAG CATTTA CTGC                TACTCTGCCCCACTC  44 27
       trpF1 NONE
    AM1_6104 6192752 .. 6192767 +  -2.5  -2.63432   CAGTGGGTGGTGAAA              GTGGC GCAAAG GTCAC               ATTGATTAGGTGTCT  41 200
    AM1_6105 6193703 .. 6193725 +  -3.4  -4.46514   TCCACATTCGTAGGC           TATATCGATG ATG CGTCGATCTG           TTTGTTTCAATAGCT  63 329
    AM1_6107 NONE
    AM1_6108 6195905 .. 6195918 +  -5.3  -4.24786   TTGGAAATAACAACT               CAGAA CCAA TTCTG                TTTCTATCTTGTAAA  68 49
    AM1_6109 6196554 .. 6196565 +  -2.2  -3.07344   TGAGGAACGTAAGAT                GCAG AAAG TTGC                 TGTATTCGGCAATGC  43 130
    AM1_6113 6200130 .. 6200145 +  -3.3  -2.63102   CTTTCCATATAATTA              GAGAA CGATCA TTCTC               TAATATGAAGGTAAT  42 352
    AM1_6114 6200738 .. 6200773 +  -2.7  -4.35116   TCTTATAATTTTTTT    TGGCTAATTAGAGAA CAATCA TTCTCTAATTAGGAG     TTTTGATATCGAATC  59 33
    AM1_6115 6200986 .. 6200996 +  -5.4  -2.91144   AAAGGAGTTGGTGCC                 CATC GGC GATG                 TGATTTAAGCGATGG  52 7
    AM1_6116 NONE
    AM1_6117 NONE
    AM1_6118 NONE
    AM1_6119 6204144 .. 6204157 +  -3.8  -4.14392   AAGAGCAAGCTTTGA               GCCA GATCAA TGGC                TTTTGAGAGTTCAGG  62 349
    AM1_6121 6205601 .. 6205652 + -14.6  -2.71364   ACCGCATAGTTGGCA TCACCAAAAGAGGACAAGAGCC CGAGGTTA GGATCTAGTCCACTTTTGGTGA TGCTTGAGAAAATGC 100 32
    AM1_6123 NONE
    AM1_6124 6207589 .. 6207605 +  -5.9   -3.0693   TAGAATATAATGCAA              CAGAATT GAT GATTCTG              TCATTTACTTTCCAC  54 38
    AM1_6128 NONE
    AM1_6129 NONE
    AM1_6130 6210933 .. 6210944 +  -2.2  -2.77895   CGTCCCTGCCCTTTG                TTCC CGTA GGAG                 GTTGTTCACGATGGC  41 17
    AM1_6131 NONE
    AM1_6132 6211978 .. 6211989 +  -4.4  -2.90075   ACGTCAAATCTTGTT                GGAT TTAG ATCC                 TCTGGTTGAACCAAA  46 18
    AM1_6133 6213738 .. 6213750 +  -3.4  -3.95456   AGCATGCCCAAAGTC                CCAA ACAGC TTGG                TTTGCTATTCAGTTT  56 107
    AM1_6135 6216009 .. 6216021 +  -2.6  -3.48824   TGACCAAACGACCTG                GCGG GACTG CTGC                TGTTGTTCTAAAATC  49 409
    AM1_6137 6217613 .. 6217627 +  -5.8  -3.20307   GAATCAAATATTAGT               TCTATT AAT AATAGA               TATTCATCATATTGA  55 451
    AM1_6138 NONE
    AM1_6139 NONE
    AM1_6140 NONE
    AM1_6141 NONE
    AM1_6142 6224454 .. 6224467 +  -3.7   -3.0395   AGCAGAGGCTGGGCA               GACGG CAAT CCGGC                TCTTGACCCATATAT  46 6
    AM1_6143 6225476 .. 6225489 +  -2.3  -2.74563   TCAGGACAGAAAAGC               CCGCT ATTG AGCCG                TCGTTAACCTATAGG  41 188
    AM1_6144 6226384 .. 6226396 +  -3.3  -3.35597   AGCAAAAACGTGAAG                CACTG CTG CAGGG                TATTTAAGGAGTAAG  47 6
    AM1_6145 6227551 .. 6227562 +    -3  -3.54676   AATGGCCTGATAGAT                GTTT TCAG AAAC                 TTAGTTTGAGTACGT  49 142
    AM1_6146 NONE
    AM1_6147 NONE
    AM1_6148 NONE
    AM1_6149 NONE
    AM1_6150 6231878 .. 6231893 +    -9  -3.39923   GAGTCGCTGATTTGC              GCCGAT AACT ATCGGC               TTGAATTTTGATAAT  71 275
    AM1_6153 NONE
    AM1_6154 NONE
    AM1_6155 6235698 .. 6235748 +  -2.4   -2.9313   CAGCAGCAACTAACC GCCCGGATGGATGGCCTGCTTG CGGAAAA CGAGAAGGCTATCAAACAGCGC ATTGTTGATTTAAAG  42 28
    AM1_6156 NONE
    AM1_6157 6236069 .. 6236088 +  -5.8  -3.14393   AGTCTTTCAACTTTT            CAAAATCT CTAT GGATTTTG             TGTTACCTATCTGAT  55 48
    AM1_6158 6236403 .. 6236415 +  -4.8  -3.16742   ACTCCCATTCCCTCA                GCGA CCAAA TCGC                TTGATCAGGGTTGAA  51 154
    AM1_6159 NONE
    AM1_6160 6237894 .. 6237904 +  -3.2  -4.69326   ACTATATCTTTTGGA                 TTCC CTA GGGA                 TTTTATATTACCTAT  65 293
    AM1_6163 6240030 .. 6240069 +  -7.5  -4.07568   TTCATTGTCATTCAA GAAAAAACACCGC--TCTT GGGG AAGAATGTGGTGTTTTTTC  TTTTAAGGCGCAAGC  72 356
    AM1_6165 6240910 .. 6240924 +  -3.5  -2.72144   TGCCCCAAGCTTTTT               CCTGG AGTCA TCAGG               CTTTCAAAGCCCTCA  42 345
    AM1_6172 6245578 .. 6245590 +  -6.2  -3.65425   CCGTTTGAGGATTCC                GCCC ATTCC GGGC                TTTGCGATCTCTGGC  61 220
    AM1_6175 6247059 .. 6247072 +  -5.3  -3.61654   GGTGTATCCTTGATT               TCTAC TTTT GTAGA                TTTCCCCTAAGTCTG  59 2
    AM1_6178 NONE
    AM1_6179 6249187 .. 6249217 +  -6.3  -3.66178   AATTGCCTAATGACC      TGGCTTGGGTGA GCCATTAA TCACCCAA-CCA       TTTCAGATTCCAGAG  63 31
    AM1_6182 6254133 .. 6254147 +  -4.3  -3.56821   TCACCGACTGAAATG               GCTAT CAGAT ATAGC               TTTCAGCCCTATGAT  52 203
    AM1_6183 6254633 .. 6254674 +  -3.7  -3.73968   CCCTGTCTGTACCTG GGTCAGCCCTG-TGGC GATCCCCCCCA GCAATCGGGGCTGGCC TTTCCTCACCACTTT  53 49
    AM1_6184 6255227 .. 6255274 +  -4.2  -3.18239   GAACTCCATGCCAGA CCGACTGGTGAGAACGAC CGCAAGCTCAAT GTCTTTTTCGGCAGTCGG TTGATCGGGTATGTC  48 171
    AM1_6186 NONE
    AM1_6187 NONE
    AM1_6188 6256729 .. 6256752 +  -7.5  -3.55487   ACTGTACCTGTCGTT          CCTTTCTAG CACCTC CTGGAAAGG           TTCTGGTTGATCTGA  66 438
    AM1_6190 6257993 .. 6258006 +  -5.3  -2.60075   ATTTGAGCTATTCCC               CATCA CCAC TGATG                ATTCATTACGGAAAG  48 520
    AM1_6192 6259302 .. 6259316 +  -3.6  -3.57627   CTAAAGATAGAAATT               TGGATT ATA AATCTA               CTTTTTATATCACCA  53 259
    AM1_6193 6260600 .. 6260610 +  -8.2  -3.79043   CGATCGCAATGCTGT                 CCCG TCA CGGG                 TTTCCATTCCTGATC  71 334
    AM1_6195 6262097 .. 6262116 +  -2.8  -4.50627   TTCGGGGGTAAAGGC            TCTGC-GAC TTC GTCAGCAGC            TTTGTTTAATCGCTC  65 405
    AM1_6197 6264882 .. 6264892 +  -2.4  -3.59979   ACCACGCTAATTCCC                 GGAG AGC CACC                 TTTCCAGTCCCACAC  49 59
    AM1_6199 6267077 .. 6267093 +  -5.2  -3.46511   ACATTATGGGTTCCG              GATACT TTGCC AGTATC              TTCTGGGTTGTCTAG  56 449
    AM1_6212 6279650 .. 6279662 +  -6.3  -3.69734   AAATACCGTAGCATC                GTCTT TTT AAGAC                TTTGACTCGGTTATT  63 364
    AM1_6214 NONE
    AM1_6215 6282330 .. 6282352 +  -6.4  -3.16564   AACAGTAGCCCAACA           TAAGATATGG CCC CAATATCTTA           TATTGCATTCCATTA  57 33
    AM1_6220 6291257 .. 6291276 +  -8.6  -2.54192   TCAAGTTGAGACTAA            CTTTGGCA AAAA TGCCGAAG             ATTGATCATCGTGTA  63 236
    AM1_6223 NONE
    AM1_6224 NONE
    AM1_6225 6297953 .. 6297966 +  -5.3  -2.62263   GTGAGAGTCAGTATC               CTAGA CCGC TCTAG                TCCTATCCCGCAGGT  49 136
    AM1_6226 6300247 .. 6300268 + -12.3  -3.17901   CGGTTTTGAAGCCAA           GTCGGAGGA GTGA TCCTCCGGC            TTAGGTTAACCATGT  93 88
    AM1_6227 6301114 .. 6301149 +  -2.5  -3.75665   GAGTAGCTGTAATGA    GGTTGCTGAGTTGGGG CCCAT CTCCA-CAAGGCAACC    TTTGCTCCAATATCG  52 42
    AM1_6229 6301985 .. 6302016 + -10.9  -4.01646   AACCTTTCCCAAAAT      TCTCCTCCGATCC TCCCCT GGGTTGGAGGGGA       TTCATTTTTTGTGTG  90 39
    AM1_6230 NONE
    AM1_6231 6302762 .. 6302775 +  -3.7  -2.62515   TGCTCGATAAACTTT               CGGTG TCAT CCCCG                TCATCTGCCGAAATT  44 116
    AM1_6233 6304293 .. 6304304 +    -3  -4.46212   ACAGCCATATTCCTC                TGAA ATTT TTCA                 TTTTCTACTGGAAGA  63 65
    AM1_6234 6305646 .. 6305664 +  -7.4  -3.35371   TCGGTTCGTGAGAGC             GTCGTGCA TTC TCCACGAC             TTGATTGAGGATGTC  62 367
    AM1_6237 NONE
    AM1_6238 6308995 .. 6309006 +  -4.4  -4.07868   TTTGATGGAGCTACT                TACG ACTT CGTA                 TTTATCTCAATCTCG  61 347
    AM1_6242 6317347 .. 6317360 +  -6.7  -4.08221   CGAGCCTTAATCACA               CTCTC TCCC GAGAG                TTTAATTCTCTTGAA  71 474
    AM1_6244 6319563 .. 6319581 +  -3.1   -2.7281   CTCGACGATCTTAAC             GGGTCTT TGGAT AAAACCC             ATTATCATTGCTGTG  42 159
    AM1_6245 6319933 .. 6319952 +  -2.1   -3.1505   TAAAAGTATGTGATT            CGGTTTC AGATGG GAGACTG             TTGATGAAGCGTACT  43 92
    AM1_6246 6322189 .. 6322202 +  -2.3  -4.24786   AATAACAGGTTATAT               CCCGA ATAG TCGCG                TTTATATCTTGTCCA  58 372
    AM1_6248 6323916 .. 6323942 +  -4.4  -3.32963   GCGAGGGGTCTAAAA         TTTGTTCGATTC CTA GGGCCGGACAAA         TTATCGCCTACAGAT  51 28
    AM1_6249 6325588 .. 6325620 +  -9.3  -2.91681   TGGCCTACTGATCAC      TTTTTCCAATAGCAA AGG TTGCTGTTGGAAGAC      TGTCTAGGCTTCAAC  71 58
    AM1_6251 6331159 .. 6331188 +    -5  -2.85574   GTAGCCCCGTGACTT       TAGTTCGAGTTG GAAAAG CGACTCGAGCGA        CTTTAGTCGCATTAA  47 118
    AM1_6253 NONE
    AM1_6254 6332032 .. 6332068 +  -9.5  -2.91873   GTGATGAATTTAATG    CTCAACTAGGGAGTGTT AAC AACTATACCTAGTTGAG    TAATTTACAAATGAT  71 17
    AM1_6260 6337010 .. 6337027 +  -4.9  -3.14463   TGGACAGCAAAATGC             CTC-CATC TTT GATGTGAG             TTGCTCAAACCCCTT  51 108
        rpiB NONE
    AM1_6264 6341141 .. 6341158 +  -4.2  -3.70109   GAACTTTGTGCGCTA             TCAACT AAACCA AGTTGA              TTATTCAATGATCTA  54 455
    AM1_6266 6343174 .. 6343191 +  -3.4  -2.89683   CTGATCGAGGGACAG             CGATTG GATCTG CGATCG              TATCTGCGATCGCAT  43 176
    AM1_6271 NONE
    AM1_6272 6346917 .. 6346931 +  -8.6  -3.81146   TTGCAGTTTCCATGT               TGCCAA ATT TTGGCA               TTCTTCCTTGGGGGA  73 430
    AM1_6281 6352633 .. 6352651 +  -8.9  -4.28432   TCTATCGTGGTTCCC             TCACCAG GATGA CTGGTGA             TTTTGACTTGGCCTT  80 128
    AM1_6288 NONE
    AM1_6289 NONE
    AM1_6290 6364358 .. 6364389 +  -3.7  -3.75898   CCATTGTGGATAATA      GAAACCCCTCAAG CGATAA TTTGATGGGTTAC       TTTGAATGATTTGTT  56 234
    AM1_6292 6365315 .. 6365325 +  -2.4  -2.78596   TTGAATGCCGAGTTT                 CCTG GTC CTGG                 TCTCCTGCAAAGATG  41 54
    AM1_6293 6365584 .. 6365597 +  -3.1  -3.73224   TCTGAAATGGTGTAA               CTTCT TGGG AGAGG                TTTGATAACGCCTAG  51 105
    AM1_6296 6369172 .. 6369184 +  -3.3  -3.33884   TGTAGCTTCATAATG                CCGGG CTT TCTGG                TCTTGGTCTTTTGCA  47 36
    AM1_6298 6371554 .. 6371570 +  -9.5  -2.84955   TGAATTTGCTCTGTT              GCTTCAA GGT TTGAAGC              TATCATAATAATTAT  70 65
    AM1_6301 6373059 .. 6373069 +  -3.2  -3.22298   ATTTGAGCAATGGGT                 GGTC ATC GATC                 TTCCTCGTCCCTGGA  46 150
    AM1_6303 NONE
    AM1_6304 6373437 .. 6373451 +  -3.5  -2.53846   TCAAGTAATTCGTGC               GGTGC GTCAA GCATC               CTGATTTTCTCTCTG  44 7
    AM1_6305 NONE
    AM1_6306 6377116 .. 6377126 +  -2.4  -3.65902   CGGTGGTAATCTCTA                 CAGC TGT GCCG                 TTTGAGTGCAGTAAA  50 324
    AM1_6311 6380277 .. 6380296 +  -6.4  -3.55563   AGTAGGAATAAGGAT            GGATTGCA CTGC TGCCATCC             TTTAAGGGGTAAGGT  61 114
    AM1_6313 6381621 .. 6381640 +  -4.2  -2.58714   GATTGCTGAACACTG            GACTAGCG CTTT CACTGGTC             TGACTTGGTATAAAA  45 148
        dsbA NONE
    AM1_6315 6383413 .. 6383429 +  -5.9  -2.65091   AAAATGGGGGAGCCG              TTAAGGT CAT GCCTTAA              GTTCTCCCTTAACCT  52 81
    AM1_6316 NONE
    AM1_6317 6384912 .. 6384926 +  -2.8  -4.62336   TGCTCAATCTATTTA               TCGATT AAC ACTCGA               TTTTTAAGATGGACT  64 18
         tal 6387955 .. 6387965 +  -2.4  -2.54193   GCGTTGCTATTCAGG                 GAGC TTT GCCC                 TAGATTGCCCTGGTC  39 12
         gnd NONE
         zwf NONE
         fbp NONE
    AM1_6322 6392329 .. 6392361 +  -3.5  -3.30243   GTGTCCGAAAGAGAA     GGGGATTATTGCGG CCATGA CCACAA-AATTCCC      TTCTGAAGCGTAAGT  49 183
    AM1_6323 NONE
    AM1_6324 6394418 .. 6394432 +  -2.8  -3.62522   CAGTTTCAGTTGCGC               TGCTAA TTG TTGGCG               TTGTTGGAGCGATTG  50 300
    AM1_6331 6405772 .. 6405784 +  -6.3  -4.14243   ATGGCTAGGAGTCAC                TCTCT CGA AGAGA                TTTTGACGTGCCATC  69 95
    AM1_6332 NONE
    AM1_6333 6407729 .. 6407744 +  -7.6  -2.84059   TGCCATTTGGAAATT              CCAATG CCAT CATTGG               TGATTACTGTGTGTA  61 101
    AM1_6334 6408528 .. 6408560 + -12.9  -2.70354   TCCATAAGCAGATTT      CTAAAGCCCGATTTT CGC AAAAGTGGGCTTTAG      TGAATTTATCAAGAG  91 138
    AM1_6335 NONE
    AM1_6336 6412164 .. 6412177 +  -3.1  -3.78329   TAGCGATCCGTCCCC               TGGAG TAGA CTTCA                TTTGAGTTCCTGCAG  51 292
    AM1_6341 NONE
    AM1_6342 6419052 .. 6419062 +  -3.2  -3.73534   TCTAGCTGTCGTCTG                 CTCT TCT GGAG                 TTGTTAGTAGACTTG  51 287
    AM1_6343 6421442 .. 6421457 +  -2.6  -3.51232   CGTGTAAATGAATTC              T-CAGGA GAT TCCTGCA              TTACTTTAGAAGGGC  48 203
    AM1_6344 6422336 .. 6422355 +  -6.4  -3.01869   CAGATTCATCAACTC            CAGGGCTA GTTC TATCCCTG             ATTTATCCGTTTATC  56 17
    AM1_6345 NONE
    AM1_6346 6424522 .. 6424539 +  -4.9  -3.35798   CAAAGCAATCTGATC             TTTAAGG AGTC CCTTAAG              TTCTCCATAGGGAAT  52 168
    AM1_6349 6427303 .. 6427316 +  -3.8  -3.44848   GATTAGGATCATGAT               GACC GATGTA GGTC                TGTTTGATCCGACAG  52 155
    AM1_6353 6431484 .. 6431509 +  -3.3  -3.40899   GGGCGCTACTCACTT         TGTCGACTTGC TCAA GTAAGTTGAGA          TTGTCGTAAACAGTT  48 181
    AM1_6356 6433276 .. 6433289 +  -3.1  -2.82015   TTTTTCCTAGATCGC               CTCTT ATAA AAGGG                TGTCCTAAGTCTCAA  43 75
    AM1_6360 6443495 .. 6443506 +  -2.2  -3.74868   GCTCTGAGGAACATA                G-GCC GGG GGCGC                TTCATTCTTTTTAGA  50 428
    AM1_6362 6446378 .. 6446392 +  -7.1  -3.08088   TTTTAATTTTTTCTC               CCTCG CTTTT CGAGG               TCTATTAGCAAGTTT  62 439
    AM1_6363 6447326 .. 6447363 +  -4.7  -3.15249   AGGTTATTAATTTTT   GGAGCCAGTGGGAAATG ATAT CGTTCCCCACTGGCAAA    TTGCTGAAGCCTATG  51 31
    AM1_6364 6447548 .. 6447558 +  -6.8  -3.06315   TGGGTCAATATCAGA                 GGGT GAA ACCC                 TATTGGGGATGTTCA  58 111
    AM1_6365 6449514 .. 6449530 +  -9.5  -3.08036   GTCTAGATAGCCATC              CCACTAA ACA TTAGTGG              ATTTGATTTCCTTGA  72 35
    AM1_6366 6454631 .. 6454649 +  -8.8  -3.06796   ACGTAGCCAACTGTC             GCTGCGTA AGA TTCGCAGC             TTCCCTCAACTCCCG  63 365
    AM1_6369 6455697 .. 6455715 +    -3  -2.76696   AAGCAGATATTTATT             GCGAACTT TAA GGGTACGC             CTTCTTACCAAGACC  43 15
    AM1_6380 6468098 .. 6468115 +  -2.7  -3.23638   TCATCAGATAGAGAT             TGCTG TCTTATTT CAGCA              TTACTCCCTGTTTGG  45 68
    AM1_6391 6479535 .. 6479556 +  -5.9  -4.06964   CCAATCAAAATAATG           CTTGATTAG AATG CTATTCAAG            TTTGCTTGTCTCTCT  66 65
    AM1_6393 NONE
    AM1_6394 6484231 .. 6484271 + -13.7  -3.57106   GGATGAAGCTTTAAG  TTTATTGTTACCTTAAAAT AAT ATTTTGAGGTAACAATATA  TTAATTTAAATTGGC 100 153
    AM1_6396 6485440 .. 6485450 +  -5.4   -4.4448   GATCAAATCAACGCT                 TAGC ATT GCTA                 TTTATTTAAAGATTT  70 147
    AM1_6398 6488258 .. 6488279 +  -5.9  -3.04792   AATTGCTTCTAGGTA           GGGT-GCAAT ATA GTTGCGACCC           TGTTCAAGATAGTAG  53 238
        ndhM 6501547 .. 6501563 +  -6.6  -3.37071   AGGTAGACCTCGCAC              CACTGA TATGC TCAGTG              TTCTCAATGCCATTT  61 266
        aroH NONE
    AM1_6410 6502688 .. 6502698 +  -2.4  -3.05844   CATAGTGCCTGTCTA                 GGGG ACG CGCC                 TGTTAAGGTCCAAAA  42 87
    AM1_6411 6502567 .. 6502600 -  -6.7  -2.83343   ATAGGCATCATTACA     CGGCATGATTTAGTG CGCG CATTAAAGCCTGCCG      TAACCTATGAATCAC  54 126
    AM1_6406 NONE
    AM1_6405 6497890 .. 6497906 -  -5.1  -2.71101   CCGGGAAATAAGTTA              TCTCCTG TTA CAGCAGA              CTGATAGCGTGACTA  49 16
    AM1_6404 NONE
    AM1_6403 NONE
    AM1_6402 NONE
    AM1_6401 NONE
    AM1_6400 NONE
    AM1_6399 6487776 .. 6487800 -  -4.9  -3.53811   GGGAGCTGTTCTAAA          GATGGAAAGAC CTG GACCTTCCCTC          TTACCTCAACGATAG  55 450
    AM1_6397 6485433 .. 6485447 -  -6.4  -2.91342   AATCAAGGATCAAAT               CAACGC TTA GCATTG               CTATTTATTTAAAGA  56 411
    AM1_6395 6484341 .. 6484353 -  -2.7  -2.66873   ACTTGTATCAAAGAG                CTACA GTT TGTAA                TAACTATCTAGGGTT  41 119
    AM1_6392 NONE
    AM1_6390 6478977 .. 6478998 -    -3  -3.83042   GGAGCTAAAAACCAA           GATAGAGT TGCTGG ACTCGATC            TTCTACAAGCCCTTT  54 508
    AM1_6389 6478097 .. 6478107 -  -3.2  -4.86029   ATAAATAATAGAAAA                 GAGT GGT ACCC                 CATACTCAAAATATT  68 111
    AM1_6388 NONE
    AM1_6387 6476910 .. 6476927 -  -8.5  -3.91984   ACAGCCCTTAAAGAA             CATGAGA ATCT TCTCATG              CAGTAAATTGGACCT  77 39
    AM1_6386 6476368 .. 6476382 -  -8.6  -3.96624   CAGTTTCATGAGAAA               GCTTTC ATA GAAAGC               GTTTTAAGGGCTGGT  77 99
    AM1_6385 NONE
    AM1_6384 NONE
    AM1_6383 NONE
    AM1_6382 NONE
    AM1_6381 6469317 .. 6469329 - -10.5  -2.75481   TCGGAATTCTAATGA                CCCGC CCT GCGGG                TATCCTTCACAGGAG  75 68
    AM1_6379 6467594 .. 6467614 -  -2.5  -5.00616   GTTGCTTGTAAAAAA            TGCTCAAGT AGA ACTGCAGCA            AAGCAATAGTTGTTC  70 463
    AM1_6378 NONE
    AM1_6377 NONE
    AM1_6376 NONE
    AM1_6375 NONE
    AM1_6374 6461230 .. 6461242 -  -4.1  -3.31726   CCTTTGGATAGAACA                GATCG GAT CAATC                GAAGTGGAATTGATC  51 81
        ndhF NONE
        ndhB 6457604 .. 6457618 -  -2.8  -2.56596   GGGTGGACTAACTGA               GGGA GGAAGAA TCCC               TAGTACTTAGCAGAG  41 3
    AM1_6371 6456207 .. 6456229 -  -9.2  -4.32607   GCAAAATTTAATAAA           TTGAGCAGTC ATT GACTGCTGAA           AGGGGATAAAACGCA  88 47
    AM1_6370 6455378 .. 6455395 -  -5.7  -2.99142   GTCAGTAAGAACAAC             TATTTCA TTCT TGAAATA              TGTAATCACTATTCC  54 400
    AM1_6368 NONE
    AM1_6367 6454376 .. 6454386 -  -5.4  -3.46563   TATAGATTACGAGAA                 CATG AGT CATG                 CGTGTTCTCAACTGG  57 106
    AM1_6361 6443122 .. 6443163 - -14.1  -3.41013   CAATTATAGGGACAA CA-CCATAGTGACAAAAGAT TTG ATCTTCTATCACTATGGCTG AAAAAAACGGTTAGA 100 54
    AM1_6359 NONE
    AM1_6358 6434909 .. 6434919 -    -4  -3.59372   CCAACTTAAACAAGA                 CAAT ATT ATTG                 AAGCTACTCATGGGG  54 29
    AM1_6357 6433327 .. 6433340 -  -5.3    -3.214   GCGATTACACCAACA               GAAAC ATGC GTTTC                AAGCAAAACAGGGTG  53 165
    AM1_6355 6431594 .. 6431609 -  -7.6  -3.16556   AAATATTATAGCTAA              GGCAAA TCCG TTTGCC               CCATCAGGTAGCGAT  63 6
    AM1_6354 NONE
    AM1_6352 NONE
        hemE 6428868 .. 6428893 -  -6.1  -5.52384   TTTTTATGAAAAAAA         GAGAGCGAGAA TAAG TACTTGCTCTC          TTTTTATAAATGGTG  91 83
    AM1_6350 6426789 .. 6426807 -  -3.8  -2.73771   TGATGATAGATACCA             CTCAACTC TTG GGGTTAAG             GTCGATAAAAAAGTA  44 399
    AM1_6348 NONE
    AM1_6347 6424260 .. 6424286 -  -2.8  -2.72591   ATCAGTGAAATTAAT         GCTGGCAACATC GGT GGCTTTGCCCGC         TTGCAGAATTTAACT  41 228
    AM1_6340 6416519 .. 6416532 -  -2.3  -3.02591   AGGAGTCAAATCATA               GAGAC TCAT GACTC                GTTGCCTCCTGACTG  42 17
    AM1_6339 NONE
    AM1_6338 NONE
    AM1_6337 6411891 .. 6411903 -  -2.7  -3.50133   GATTCCTACAAAAAC                TAACT AGG AGTCA                AATGCGATTAAAATT  48 241
    AM1_6330 6401101 .. 6401111 -    -4  -2.90813   CATGGTTTTAAATTA                 CTTT CTA AAAG                 AATAGTTGAGATGAT  47 218
    AM1_6329 6396885 .. 6396896 -    -3  -2.57795   TCTATCACCAATGCA                TTGA TTCA TCAA                 TCGTTGTGGTGGCTT  42 165
    AM1_6328 NONE
    AM1_6327 NONE
    AM1_6326 NONE
    AM1_6325 6393794 .. 6393810 -  -2.9  -4.21194   CTGGAGGATTTAAAA              CCTTTGA GCA CCAATGG              GCGATGGCTCAAGCC  59 363
    AM1_6312 6380276 .. 6380297 -  -2.9  -2.96963   CAGTAGGAATAAGGA           TGGATTGCA CTGC TGCCATCCT            TTAAGGGGTAAGGTC  43 26
    AM1_6310 6379168 .. 6379178 -  -3.2  -3.35597   CTCACTTCTCAAACA                 GCCT CTA AGAC                 AGGATCGACGGGAAT  47 8
    AM1_6309 6378229 .. 6378247 -  -2.3  -3.01712   TCCCTTTTGGTAATA             CCAACTC TTCAT GGGCTGG             TGCATGATAGTTCAG  42 71
    AM1_6308 6377720 .. 6377733 -  -2.3  -3.82083   CCAGGATAATTTAAA               GGGGT GGTG ACCGC                CTTGAAGGCTATTAC  51 75
    AM1_6307 6376397 .. 6376412 -    -4  -3.40899   AATCGTTGATGATAA              CTTGAA TAAT CTCAAG               GTTTTAGTAGGGATA  50 481
    AM1_6302 6372882 .. 6372900 -  -5.2   -3.1247   ATAATTTGAAGAAAG             CGGGCTTG AAT CAAAACCG             GGTCACACTGTCTGG  52 152
    AM1_6300 6372075 .. 6372087 -  -6.9  -2.90194   ATGGCGGGAAGCAGA                GCGGC CAG ACCGC                CTGGGCTGACGGCAC  57 116
    AM1_6299 6371682 .. 6371695 -  -4.5  -3.63515   CTCTATCTCTAACAA               GCCGT AAAC ACAGC                CCCCAACTCATCAAA  57 5
    AM1_6297 6369015 .. 6369034 -  -4.4  -3.01712   TCCCTGTGCGGAATA            TTTGACGGT TCT ACC-TCAAA            TGAGATCGTTGCTGT  47 515
    AM1_6295 NONE
    AM1_6294 6365475 .. 6365487 -  -6.3  -3.06183   GCTATTGCCATCCAA                TTGAG CAT CTCAA                GCACTCATTCTTTCT  56 450
    AM1_6291 6364233 .. 6364244 -  -4.4  -4.00038   GATTACTAGTAGAAA                CACT TCAG AGTG                 CATCAAGAACAAGAA  59 147
    AM1_6287 NONE
    AM1_6286 NONE
    AM1_6285 6359411 .. 6359421 -  -5.4  -3.55262   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 8
    AM1_6284 NONE
    AM1_6283 NONE
    AM1_6282 NONE
    AM1_6278 6349674 .. 6349692 - -10.2  -2.94888   AATTTAGTTAAATTA             CCTCCGGC AGA GCTGGAGG             CTTATTATGATTAAC  76 198
    AM1_6277 NONE
    AM1_6276 NONE
    AM1_6275 NONE
    AM1_6274 6347764 .. 6347775 -  -2.2  -3.06261   TTTGAATCTTTAAGA                CTAC TAAA GCAG                 CCCCTCATTCTCTGC  42 17
    AM1_6273 6346344 .. 6346357 -  -3.1  -3.19442   AGCGAAGACATCGAA               GGTTC CCAA AAACC                TCACGGTTGCATGGG  45 317
    AM1_6270 6344602 .. 6344619 -  -2.5  -3.53091   AGTCGCTCTCGCAAA             GCCGTGC CTTT GCTCCGC              TCCCTGCCTTTATTT  48 136
    AM1_6269 6344305 .. 6344317 -  -3.3  -3.14132   TCCTTGTTCGAGTAA                CTCTG GCA CTGAG                ATTGTGCGTCAACAA  46 34
    AM1_6268 NONE
    AM1_6267 6342689 .. 6342699 -  -3.2  -4.05788   CTGTTCTAAATCAAA                 CGCT TAA AGCA                 AGACAAGCAACTGCT  58 401
    AM1_6265 6340805 .. 6340822 -  -4.9  -2.90345   AAGCGCATACCAAAG             TTAGGCT CTTG AACCTAA              GTTCGAATGAGGTAG  50 483
    AM1_6262 NONE
    AM1_6261 6336858 .. 6336870 -  -5.5  -3.48288   TAATGGAGAGCATAA                GGCGA AAC TCACC                ACCTTACTATCACTC  56 105
    AM1_6259 6335629 .. 6335643 -  -4.3  -3.97911   AGGAAACACACTAAA               TGTAG GACTG CTACA               CGCTAATTCCCAGAG  59 21
    AM1_6258 6334228 .. 6334248 -  -3.3  -3.72695   ATTTGCTTGACGAAA            GTCTATACA TTT TGTATCAAC            ATTCGTGAAATTTGC  51 96
    AM1_6257 NONE
    AM1_6256 NONE
    AM1_6255 6332030 .. 6332070 -  -6.9  -3.20723   CTGTGATGAATTTAA  TGCTCAACTAGGGAGTGTT AAC AACTATACCTAGTTGAGTA  ATTTACAAATGATGT  59 58
    AM1_6252 6331036 .. 6331058 -  -2.8  -4.98531   CGTTCAAAGCAAAAA          TC-CCAAAC TCTATC GTTTGGAGA           AAATTTAGGCACAGG  70 64
    AM1_6250 6325564 .. 6325577 -  -8.1  -3.65446   TAAGTAAATAAGTAA               GGCCA AGAC TGGCC                TACTGATCACTTTTT  70 259
    AM1_6247 6322000 .. 6322010 -  -2.6  -4.40804   CACCAGTGTATAAAA                 TAAA TCC TTTA                 TTGATGGGAGCAGCT  59 435
    AM1_6243 NONE
    AM1_6241 6316881 .. 6316891 -  -5.4  -3.53012   CGCTCTGCTCTCAAA                 GCTA AGC TAGC                 TGTTTGATTGAGCTT  57 16
    AM1_6240 6314012 .. 6314022 -  -3.2  -3.60792   GCTGTAATCTTGAAA                 GAAC GAC GCTC                 ATACCGATGAACAAT  51 282
    AM1_6239 6309120 .. 6309150 -  -3.2  -2.77899   TTGTTTTACGAAGCA       GTAGCTTCTCATCC TAA GGACAACTAGCCAC       ATTCGTAAAAGGAGC  43 8
    AM1_6236 NONE
    AM1_6235 6304865 .. 6304883 -    -6  -3.19026   GAGTTCAAGATGTAA             CTGGCA TCGATCG TGCCAG             CAAATTTACCCTGAT  55 501
    AM1_6232 6302695 .. 6302708 -  -2.3  -4.95547   CTCATAACAAGAAAA               GACTG AGAA CCGTC                GCAAAAATGTAGGGT  68 58
    AM1_6228 6300806 .. 6300820 -  -2.8  -4.19704   GAATGTGATTGAAAA               TTGGAA TAG TGCCAA               TGACTTCATCTTCTA  59 404
    AM1_6222 6291553 .. 6291574 -  -6.7  -3.69434   CTAACGAACGGTAAA           CTAAATGAC TGGC GTCATTTAA            GTCTTTAATGATGGA  65 30
    AM1_6221 6291257 .. 6291276 -  -6.4  -3.27994   TCAAGTTGAGACTAA            CTTTGGCA AAAA TGCCGAAG             ATTGATCATCGTGTA  59 156
    AM1_6219 6285214 .. 6285227 -  -6.7  -2.93382   CTCCATAGCCATACA               TGAGC CATG GCTCA                TGCCCACTAGTAGCT  58 362
    AM1_6218 6284117 .. 6284144 -  -3.4  -2.59133   AGAGATAAGTAATAT        CCGCTACTGTTGC CAT ACAACTG-AACGG        TATCTTGGATATTGC  42 49
    AM1_6217 6283931 .. 6283957 -  -9.4  -4.20042   AGCAAGATTTTAAAA         GCCCAAAGATCC AGA AGAACTCTGGGC         TCAGAAACTTAACTA  85 34
    AM1_6216 6281976 .. 6282007 -  -3.6  -4.32048   GAAGAAGACTCAAAA      GACCCCCAATCGTG AACT CAAGATCGCGCGTC       GTCGGTTAAAAGAGG  63 487
    AM1_6213 6279478 .. 6279496 -  -3.1  -3.60948   GAATACACCTTCAAA             CAAACGG CAGTC CCGCTTA             CTATTAGGCAGTCTG  51 93
    AM1_6211 6276748 .. 6276760 -  -7.7  -2.87527   TACCTAGCAGCAAAG                CCTTC AAA GAAGG                GGTTAGCGGCTATAA  61 220
    AM1_6210 6276442 .. 6276452 -  -3.2  -3.95073   CTTTATACCTATAAA                 CCTG TTT CAGA                 AATGTGCTGAGAACG  56 8
    AM1_6209 6275313 .. 6275330 -  -8.5  -3.17075   GTTTCCTGAATCTAA             CCTGAAA ATTT TTTCAGG              TTCTGATGGGGTAGC  67 207
    AM1_6208 6273922 .. 6273936 -  -5.8  -2.54896   GGGTTATCGAATTGA               TGAATT GGA AATTCA               GCATTCAGCTGGAAA  52 30
    AM1_6207 NONE
    AM1_6206 NONE
    AM1_6205 6271269 .. 6271285 -    -8  -4.07568   CTCTTTGTTTCAAAA              GACCTC CTAAC GAGGTC              AAAGTATTGGAAGTT  74 88
    AM1_6204 6270596 .. 6270611 -  -2.5  -2.87344   CACTGCCCGGACATA              CCCCA CCTACC TGAGG               AATCCACCACCGCAG  42 76
    AM1_6203 NONE
    AM1_6202 6269927 .. 6269939 -  -3.4   -3.7948   TGAAGACGTACTAAA                TCCT CTTCT AGGA                TATAGAATTTATCTA  53 321
    AM1_6201 6268714 .. 6268738 -  -3.7  -4.18018   TTTTGCTATTTAAAA          TCTATTTTAAG CCG CATAAAATAAA          ATAAGTGAGCTAAAA  60 172
    AM1_6200 6266918 .. 6266928 -  -3.2  -3.55814   CACGAAGCCAGACAA                 CAGC AGA ACTG                 GTACAACCTTGCCGC  49 53
    AM1_6198 6264750 .. 6264762 -  -6.3  -3.69734   AATAACCGAGTCAAA                GTCTT AAA AAGAC                GATGCTACGGTATTT  63 293
    AM1_6196 6261881 .. 6261892 -    -3  -3.36749   CATTCTCAACATCAA                TTAC AGTT GTAA                 TTTTAAATTTTGCTC  47 49
    AM1_6194 6260341 .. 6260356 -  -5.4  -3.33162   TATCTCATTGGATAA              GTCAAG ATAT CTCGAC               CATGAAGCCGGCACA  55 151
    AM1_6191 6257585 .. 6257595 -  -6.8  -3.33483   GATCTAAAGGACTAA                 CCCT GAA AGGG                 CAGTTCATCGATTTT  61 393
    AM1_6189 6255850 .. 6255874 -  -2.9  -3.59979   TGGTGTCATCCCAAA         CCCTG-TCAC TGTGAT GTGATCAAGG          CTTTCCTTGATTGGA  49 500
    AM1_6185 6255084 .. 6255118 -    -2  -4.46656   TTCAGAACAGTAAAA     GGCATCGCCAAGCTCA GGA CAAGTCAAACGATGCC     TTTTATTGAACGAAC  60 86
    AM1_6181 NONE
    AM1_6180 6249086 .. 6249099 -  -6.7  -3.75153   CTGGGGCAATTCAAA               GCATC GATG GATGC                GATCGCAAAAACAGT  63 397
    AM1_6177 NONE
    AM1_6176 6246924 .. 6246948 -  -4.9  -3.25192   TGTAACGCCATAACA          TCTCCCACCTG GAG CTGCTGAGAGA          GTGAGCCTAGGTCAA  53 167
    AM1_6174 6245831 .. 6245844 -  -2.4  -2.80796   CTTGAGGATTTAAAG               CTCA TATTAG TGAG                TAAGGATATAGCGTA  41 143
         hup 6245409 .. 6245436 - -11.4  -4.52589   TCGGTCCATAGAAAA        CGGATGGGTT TTCAAGTG AACCCATCCG         TTGAACCACAGTAAT 100 72
        rpoD 6242665 .. 6242678 -  -2.4  -2.78606   GCAACGAAGATAGTA               GTTC TTCGCT GAAC                TGAATATCTTTGAGT  41 138
    AM1_6170 NONE
    AM1_6169 NONE
    AM1_6168 NONE
    AM1_6167 NONE
    AM1_6166 6240737 .. 6240750 -  -3.1  -2.74012   CTATGAGGGGAATTA               TGGCT ATTG AACCA                TAGACGTAGAGATAC  43 109
    AM1_6164 6239677 .. 6239688 -  -2.2  -2.83715   TTGATGAGGACGAGA                CGGA TTTA TCCA                 ACTCCAATTAACCAG  41 359
    AM1_6162 NONE
    AM1_6161 6237636 .. 6237655 -  -7.9  -3.06261   GGGTAAGGCCCAAGA            GTGAGAG GGTTGT CTCTCAC             CAGGATTTTGAACCC  62 375
    AM1_6152 NONE
    AM1_6151 6231671 .. 6231681 -  -4.6  -3.29511   GCGATGTCGCGACAA                 CCAC AAG GCGG                 ATCAACCCCCAAATT  53 157
    AM1_6136 6215561 .. 6215573 -  -6.3  -2.68799   ACCAAAGTCATATGA                CGAAA CAT TTTCG                CAAAACTGTCGGTAT  53 209
    AM1_6134 6213622 .. 6213639 -  -4.9  -4.27617   TACAGCGTATGAAAA             CAGTATC AAAT AATACTG              AAGCTCAGAAAACTT  66 357
    AM1_6127 NONE
    AM1_6126 NONE
        xerC 6207428 .. 6207456 -  -3.8  -4.30576   TTGGCATCACCAAAA        GAGGACAAGAGC CCAAT GTTCTTGCACTC        GTGAAATTTATCGCA  63 328
    AM1_6122 6205610 .. 6205643 -    -3  -4.30576   TTGGCATCACCAAAA     GAGGACAAGAGCCC GAGGTT AGGATCTAGTCCAC      TTTTGGTGATGCTTG  61 76
    AM1_6120 6203857 .. 6203880 -  -3.2  -3.71148   GAAAATGCACGCAAA          GCTATAAGCAG CAA CTACTT-CAGC          TCATAAGCACCAAGC  51 21
    AM1_6112 6198531 .. 6198543 -  -4.1  -5.24551   CGAAATCAACAAAAA                GCAAG TGG CTTAC                AGCTTTTCCCCAGGC  78 22
    AM1_6111 6197914 .. 6197942 - -11.1  -2.65264   CTAGCAGCCAGACCA        CTCGCTCTACA GCCCCAT TGCAGAGCGAG        TGGCAAAGGTGATAA  76 3
         lys 6196339 .. 6196352 -  -5.3  -3.61178   GCGACCTATTGGAAA               GATAC CTAT GTATC                GCGTTGGGTGCTGTG  56 386
    AM1_6106 6193509 .. 6193538 -  -2.1  -4.41494   GATGCGCAACCAAAA       TACAGTGTGTTGT TTAA AGAACTCCCTGTA        AGCCATGCAGAGAGA  60 97
    AM1_6102 6190735 .. 6190749 -  -2.8  -3.14463   AAGTCCCCCTATTAA               GGTG ATTAACG CACC               CCAGTTTCTGACGAC  44 448
    AM1_6101 6190197 .. 6190211 -  -5.6  -4.05004   TCATCAGAACAATAA               GCCCAC CCT GTCGGC               AAAACAATAGGACCA  66 97
    AM1_6100 6189006 .. 6189021 -  -4.7   -3.6761   CGTCTGGAATAAATA              CAGAC TAAATC GTCTG               AAATGAGATGTCAAG  57 98
    AM1_6099 6188405 .. 6188417 -  -4.1  -2.69603   AAAATTACGACAGGA                TCTGC AGC GCAAA                TTTTAGGTGCTGCTG  45 2
    AM1_6098 NONE
    AM1_6097 6185978 .. 6185988 -  -6.8   -4.1043   CTCAAAGATGAGAAA                 GCGA TTA TCGC                 ATTGACTCAATTGGC  68 157
    AM1_6095 6183450 .. 6183480 -  -5.4  -4.56791   ACTCAAAAATACAAA       CGGATGTGGGGA GCTGTTG TCCCCACATGTG       GGGATTAGAGGTGAG  73 168
    AM1_6093 6182336 .. 6182362 -  -5.1  -3.27436   GAGATACCGATAATA        CCTGCCGCGCTC TGGT GAGC-CGGGAGA         TGGCGCAAACTCTTT  55 360
    AM1_6091 NONE
    AM1_6090 NONE
    AM1_6089 NONE
    AM1_6087 6179216 .. 6179231 -  -3.3  -4.21275   CTAATCGATTGAAAA              CCTAT TTGATG ATAGG               CCCTAATACAACACG  58 323
    AM1_6086 NONE
    AM1_6085 6173559 .. 6173581 -  -6.2    -3.186   GAAGATATGAAGAGA           TGTGGGGAGG CGT CGTCACCACA           TGTGGTGAATGAGAT  57 74
    AM1_6084 NONE
    AM1_6083 NONE
    AM1_6082 6170130 .. 6170166 - -10.2  -3.06133   GAAGTGGGGATTTAA   GGTGGGGGTAGCAACCT CATT AGCTTGCTACCCGC-CC    TCACCCGTTGTCGAA  76 44
    AM1_6077 6166058 .. 6166069 -  -2.2  -3.52113   GGGCAAAATGCACAA                TCGA CACG CCGA                 CCACTAGCCGACTCC  47 303
    AM1_6076 6165770 .. 6165781 -  -2.2  -2.73701   GGCCAGGAAAGCAAT                CTGC TTTG GCAA                 TCAGTCGCTTCCTAA  41 55
    AM1_6074 6164247 .. 6164262 -  -3.3  -2.63381   CAAAGCCTGAAATAT              CTCTT CTAAAT AAGAG               GGAGTTTAGCAAGAG  42 133
    AM1_6073 6163568 .. 6163589 -    -8  -3.08679   CTTTGTCAGCTAACA           GCTCGTAC TCAGGG GCACGAGC            AATATTTTAAAGAGT  63 147
    AM1_6072 6162313 .. 6162323 -    -4  -3.44284   TCTGGATCAAGAACA                 TATG CCG CATA                 GTACTGCCCACTGTA  52 479
    AM1_6071 6158323 .. 6158336 -  -2.3  -3.09516   GGCGTCATGATTCAA               TCGCT CCCA AGCGG                TGCAGCATCTGGCGG  43 1
    AM1_6070 NONE
    AM1_6069 6156137 .. 6156148 -  -4.4  -2.74203   TTAATGCAGAAATAT                CAGA ATTT TCTG                 TGTCTGACACTACCT  46 68
    AM1_6068 6155515 .. 6155552 - -11.3  -2.70528   ACGATTGAGACATGA   CACAGAGCTGTTGAATC GAGA GCTGCCACAGCTCTGTG    AAAGGCCCTGACTAA  80 37
    AM1_6067 6154142 .. 6154157 -  -6.8  -4.12133   CCAAAGATCAAAGAA              GGGACA GCAC CGTCCC               CCCTTTTTAGGCGAA  71 215
    AM1_6065 6151620 .. 6151630 -  -5.4  -3.53012   CGCTCTGCTCTCAAA                 GCTA AGC TAGC                 TGTTTGATTGAGCTT  57 58
    AM1_6063 6149442 .. 6149456 -  -5.6  -2.56596   TGGCGCAGCAAGTTA               GGCTGG TCA CCAGAC               TAATGCCACGTCAGT  52 64
    AM1_6062 6148402 .. 6148413 -    -3  -4.25848   AATGGCTTAGCAAAA                GATT AAAC AATC                 AAACATAATGTTGCT  61 238
    AM1_6056 NONE
         ggt 6138539 .. 6138551 -  -3.3  -3.16785   TACGAGATCAATATA                GTGTC AGT GACTC                ATTTGGCTAACGACA  46 184
    AM1_6053 6137493 .. 6137504 -  -5.8  -2.57985   TGAGAATCCAAGTCA                TGCC AAAA GGCA                 CATCATAGTATTTCC  52 75
        surE 6136793 .. 6136806 -  -5.3  -4.16259   ATATAAGTACATAAA               GTATG GGCT CATAC                TTGAATCTGAGTGAC  65 20
    AM1_6051 NONE
    AM1_6050 6134692 .. 6134714 -  -8.4  -3.85698   TTTGGTTGGGATAAA           CCGCAACGCT GAC AGAATTGCGG           TTGGATGGACTAGCG  75 82
    AM1_6049 6134244 .. 6134261 -  -9.1  -5.64274   GCAGGCATAAAAAAA             GCTGACC CTGA GGCCAGC              TATTAGGATTTTGGG 100 55
    AM1_6048 6131312 .. 6131326 -  -5.6  -3.21772   AAGGCCGTCATAATA               CTCGCC ACG GTCGAG               CTGGGGTCACCATTG  52 410
        psbD 6127430 .. 6127454 -  -5.8  -5.07652   TCTTCCAAAAGAAAA          GAGGTAAG TTTATACGT CTTACCTC          TTTTGTAGATAGCAG  82 51
    AM1_6042 6125388 .. 6125403 -  -2.6  -2.81815   GCCAAGCATGAATCA              GCCATGA AAG TCATG-C              TCTCTATCTTGCCCT  42 53
         tmk NONE
        holB 6123657 .. 6123669 -  -3.3  -3.14931   TCTACTTCCCAGCAA                CTCCT TCG AGGTG                ATGTGTCTGTTGAGC  46 80
    AM1_6037 6119631 .. 6119642 -  -5.8  -6.04419   AAAAGAAGAAAAAAA                CACC TGTG GGTG                 AAATCTTGGAGGTAC 100 167
    AM1_6034 6116412 .. 6116423 -  -2.2  -4.63486   ACCTCTGCAAGAAAA                CGGA CCAA TCCA                 TAGTCTAGCAGGCTT  63 113
    AM1_6033 NONE
    AM1_6032 6115010 .. 6115037 -  -4.3  -5.75342   TGTCGCCAAAAAAAA        GGAAATCTT ATTCTAGTTG AAGATTTCC         TTTCTATAAAGTTCC  93 72
    AM1_6031 6113853 .. 6113863 -    -4  -2.73635   CAAATCTGGTCAAAG                 CTTT GCC AAAG                 ACGGTTTGTAGAACT  46 75
        cydA NONE
        cydB 6111119 .. 6111135 -  -2.9  -3.03741   AGTTACAAGCAGATA              CTGTGGC AGA ACTACAG              AAATATCAGAACTTG  43 198
    AM1_6027 6109488 .. 6109498 -  -6.8  -3.06312   AAAGCCCTGACCCAA                 CGCT TAG AGCG                 GACCAATGGCATCGT  58 515
    AM1_6018 6103719 .. 6103734 -  -4.8  -3.23395   ACCTATGACGACCAA              TGAATA TACC TATTCA               TTTGGTGCAGCAAAC  50 189
    AM1_6012 6094619 .. 6094653 -  -2.1  -2.93252   AGCGTTGAAGAACTA    GGGATTCGAGCC-ATG TAAG CATTGGCTCTAGTTCC     CCGATCTCATTGTGA  42 295
         tal 6093365 .. 6093389 -  -4.4  -2.78384   TTTGTGCTCATCAGA         CATCATCCGAT TTGG ACC-GATGATG          ATTCGAGTACCATCT  46 3
    AM1_6010 NONE
    AM1_6009 6090444 .. 6090454 -  -8.2  -3.09844   TTTACACCTGAAAAC                 GGGG CAG CCCC                 TCCTTGATTTAGAAC  67 78
    AM1_6008 NONE
    AM1_6007 6087748 .. 6087760 -  -7.7  -2.50443   CCAGACCTTAGGAAC                CGTTG AAG CAACG                TCCCAAGTCTCTAAT  57 392
    AM1_6002 6083794 .. 6083840 -  -8.7  -4.46073   TGCGAACACAATAAA TCCCCCTCATTTTCGAAACCC AACAG GAGTAATGAGAATGAGGGGGA AGTTCCAGTATTGTC  93 85
    AM1_6001 6082524 .. 6082538 -  -2.8  -3.44284   GCCCTAGCAACAATA               GGTC TTAGCTG GACC               GCCATTATTCTCAAT  47 355
    AM1_5992 6067547 .. 6067568 -  -3.1  -3.14393   ATGAGATATCCAACA           TAGG-CTTAA TTC CTAAGACCTA           ATAAAGCTAAAGACT  46 106
    AM1_5991 NONE
    AM1_5990 NONE
    AM1_5989 NONE
    AM1_5988 6063699 .. 6063711 -  -2.7  -3.24747   TCTCTATATTACTAA                GACAA TAC TTATC                CATCAAAAAGGCTGC  46 222
    AM1_5980 6057553 .. 6057574 -  -4.5  -3.05463   ACCGCTTTTATTTAA           TCGTAGTCTG CCC CAAAC-ACGA           AGATCGTTACCTTTA  50 95
    AM1_5979 NONE
    AM1_5975 6048606 .. 6048620 -  -3.4  -4.19817   GTTACCTAGTTAAAA               CCGGGG TTC CCCCTA               ATAAGACATTCCTAA  58 37
    AM1_5974 6043692 .. 6043706 -    -5   -3.1272   GGATAAAATCAGATA               CTCAAC GTC GTTAAG               TGTAATTTGGCTGCT  51 157
    AM1_5973 NONE
    AM1_5972 NONE
    AM1_5971 6038341 .. 6038351 -    -4  -3.37245   GGAGGCCAATACTAA                 TACT TGG AGTA                 AAATCAGCCAGCTCA  51 43
    AM1_5970 6037430 .. 6037442 -  -3.4  -4.45765   TGGAAAACGAATAAA                CAAG GTCAA CTTG                TTCTAACAGCAGAAC  63 204
    AM1_5966 NONE
    AM1_5965 6027860 .. 6027882 -  -4.9  -3.35696   GGATAAATAACTGAA           TTAGCCCAG AAGGA CTGAACTAA           GGAATGCGAGGCCCA  53 3
        cobW 6026689 .. 6026745 -  -4.7  -3.03441   GAGTATTGGCGAACA GCATTGCTATTCAGTGACT-GCAACCAC TGGG GTGGTGACGAGCC-CCGAA-AGCAATAC CGTGTGTCTTACGAA  50 50
    AM1_5959 6021203 .. 6021213 -  -3.2  -3.05384   GTGCGGCTGATCGAA                 CGAT TCC ACCG                 GACTCTAGTCGTGAT  45 257
    AM1_5957 6020049 .. 6020067 -    -6  -2.72344   GGGGATGTTTAAGCA             CCCTACTC GGT AAATAGGG             GTGAAAATTCTATAA  52 254
        gcvP 6016951 .. 6017001 -  -9.9  -4.63172   GATTAAACGATAAAA TATGCCCCTTATTCATCTTTTTT GGGTA ATAGACGATGAATAAGGGGCAAA AGGGAATTTCAGGGA 100 54
    AM1_5954 6016465 .. 6016491 -  -2.5  -3.60971   ATCCTAATTCTCAAA        TTAG-GCTCT-AT CAA ATCAGAGCACTAA        ATAATAATAAAGACT  50 41
    AM1_5952 6014841 .. 6014851 -    -4  -3.05997   TTGGCAGAAATCATA                 TCTT GTG AAGA                 GGGTTTCTCTGACAC  47 233
    AM1_5949 6012517 .. 6012529 -  -4.1  -3.60865   GATCGTAAAGGACAA                TACAG CAT CCGTA                TCAATAGCCAATGGC  52 501
    AM1_5941 6007901 .. 6007925 -  -2.1  -3.89346   CCTGCAGCGGATAAA          GCTGTAATTGC CGA GCATTTACAAT          CTATCCACCATAAGG  52 331
    AM1_5939 NONE
    AM1_5938 NONE
        engA NONE
    AM1_5936 6003197 .. 6003212 -  -4.7  -3.00215   AAAGCCTCAGATATA              CAGGA CACTTC TCCTG               CTTCTCTATCAGATC  50 78
    AM1_5935 6002865 .. 6002886 -  -4.4  -5.34555   TTATACTATAAAAAA           GAGTTAGC AGGAAA GCCAACCC            CACAAAATTCAATGC  81 193
    AM1_5933 6001112 .. 6001127 -    -4  -3.76373   GTTGCAACATCGAAA              GTATGA GGAA CCATAC               TCAATTCTAACTTTC  57 149
    AM1_5932 5998877 .. 5998893 -  -3.7  -2.64651   AATGCCTCAAAGGTA              TAGGGAA CGT TTGCCTA              AAAAGACGAAATTTT  44 129
    AM1_5931 5998363 .. 5998401 -  -6.1  -5.64006   AGCTAATCAAAAAAA  TGCCAGATTGATCAATCC GCAT GGGGT-ATCAACCTGGCA   TTTTAAGTTGGAACA 100 71
    AM1_5928 5995801 .. 5995851 -  -9.1  -3.08679   CGTTGCTAGTCAATA CCTCTCATCCACTGATTCAAAATC TGTT GACTCTGAGTCAG-GGAGGAGTGG TCCAAGCGGATGGTC  66 318
    AM1_5925 5993264 .. 5993276 -  -5.5  -3.48288   TAATGGAGAGCATAA                GGCGA AAC TCACC                ACCTTACTATCACTC  56 79
    AM1_5924 5991047 .. 5991057 -  -6.8  -3.50335   TGCGATAAAGATCAA                 GCCA AAC TGGC                 AGATATTTAACACAG  63 191
    AM1_5923 5989246 .. 5989294 -  -9.9    -3.727   GTTACTAGACCGAAA TGCCGTTATTGATGAAGAAGAA ACATAG TTCCACCT-ATCAATAACGGCA TTTCGGTCAATGCAG  80 58
    AM1_5921 5985768 .. 5985800 -  -7.7  -2.83249   GGGTATAGAAGATCA      CCACCTAGACTTATG ACA CTTAAGTTTGGGTGG      GCCGTTTATGTTCAT  61 85
         pnp 5983379 .. 5983401 -   -12  -3.73107   GCATCAAACTGGAAA           TGCTGCAGCG GAA CGCCACAGCA           TCTCTCAAAGCCAAT  93 60
    AM1_5919 5982604 .. 5982614 -  -3.2  -3.78934   CTCCCCTTACAACAA                 TGGC TCA ACCA                 GGGATATCACGCCGA  53 390
    AM1_5918 5981346 .. 5981366 -  -6.9  -3.27476   ATCTGGAATGAGTAA            CATTCTTAG ATT CTTAGAATG            AAGACGGTTGTACGG  61 65
    AM1_5916 5980724 .. 5980737 -  -5.3   -3.1855   GCGCTCAATAGTCAA               TGTTG GCTC CAACA                GACTTTTCTTGCCGA  53 205
    AM1_5914 NONE
    AM1_5913 5978801 .. 5978826 - -11.1  -3.57263   ATTGTGATTCCCAAA         GGACCACCAGT TCTG ACGGGTGGCCC          CGCTGCCGCAACTAT  79 352
         hup 5966841 .. 5966860 -  -4.8  -2.78679   TGCCTCCATGTAAAG            GGCGACTC AATA GTGACGCC             TCATCCAGAAAATTA  49 46
    AM1_5905 NONE
    AM1_5904 5964365 .. 5964375 -  -4.6  -3.09273   GGCCGTGAACAGATA                 GGCA AAG CGCC                 TCAAGCGGTGTAGAA  51 77
    AM1_5902 5962387 .. 5962405 -  -9.6  -4.56775   ACCTTTTCTGAAAAA             CACTCACC TAG GGTGAATG             TAATGAAACCCAACC  95 371
    AM1_5899 5960579 .. 5960593 -  -5.8  -3.06261   GCTTAATTTGGAATA               TCTTTT TCA AAAAGA               AATTCTTCATCCCTT  53 72
    AM1_5897 5957685 .. 5957702 -  -2.1  -3.09878   GCTAGCTATTCAATA             TCATAAA CAAA TTTATAA              AAATCGCATGAATTA  43 129
    AM1_5896 5956840 .. 5956856 -  -4.4  -4.37092   AGTCTTGGCACAAAA              CCCTTA GTGCT CAAGGG              CACCAGGTTGAACAT  65 386
    AM1_5893 5954024 .. 5954038 -  -2.1  -4.41486   TAAAAGAAAAGTAAA               GTCTG CTCGT CAAAC               AAGTTACGGGACTAA  60 29
    AM1_5892 NONE
    AM1_5891 NONE
    AM1_5890 5947892 .. 5947903 -  -2.2  -4.72631   AGTAATGGAATAAAA                GCCT GTCT AAGC                 TGGGGAACACTACTT  63 111
    AM1_5889 5947354 .. 5947364 -  -4.6  -3.57462   GAGCCGATGCTGAAA                 GGGC AGT ACCC                 GAATTCAGATTATAC  57 30
    AM1_5888 5945798 .. 5945808 -  -5.4  -3.55262   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 8
    AM1_5887 5945601 .. 5945623 -  -2.6    -3.767   GACCGATGGATTAAA           GCCAAGCTTC TAA AAAGCTAGCC           ATCTTCAGACATATG  52 20
    AM1_5886 5943895 .. 5943922 -  -6.3  -4.10269   GAAACAAAGACTAAA        GGGTG-ACCACT TGATT AGTGGGGCACCC        ATGAAAAAAACTCCT  69 109
    AM1_5885 5942925 .. 5942936 -    -3  -3.58801   ACAGAATCTTCTAAA                CTAA AGCC TTAG                 TAGAGAAAAGGCTGT  51 135
    AM1_5882 NONE
    AM1_5881 NONE
    AM1_5880 NONE
    AM1_5879 5937974 .. 5937992 -  -2.4  -3.63515   CTTGATTTTTAATAA             CAACTGAA GAA TTCGATTG             TGCATCAACAAAGTG  49 95
    AM1_5877 NONE
    AM1_5876 5934716 .. 5934732 -  -5.9  -4.28049   GTTAAAACGCTAAAA              TCCCTAT AGA ATAAGGA              TTTTCTCCAGATTCC  70 249
    AM1_5869 5931084 .. 5931097 -  -3.7  -3.34962   GCTCATAGCCGAGAA               GGGGC AGCA GCTCC                GCTCGGCTCAGGCAA  49 114
    AM1_5868 5930646 .. 5930665 -  -6.3  -3.24924   GCCGCACCGAGAAGA            GGCACCG ACCCAG CGGAGCC             AAACCGATCTTGCTT  59 140
    AM1_5867 5929313 .. 5929326 -  -3.8   -3.5393   ACCATCTCCCCGAAA               CCCT GCCAGA AGGG                GCAGTTTGCATTGAG  52 310
    AM1_5864 5927943 .. 5927955 -  -4.1  -3.81951   TGCGACATTACCAAA                GAATG TAC CACTC                CATGCGATAGCAGCT  57 394
    AM1_5863 5927465 .. 5927496 - -16.2  -3.12351   GTCTTCCACATTGAA      TACTTGAGATTCAT ACCC ATGAATCTCAAGTA       TTCAATGCTTTGGTC 100 139
    AM1_5862 5926814 .. 5926828 -  -2.9  -4.26076   TCATGGCTAGGAAAA               TCAAA TGTAT TTTGA               GAGTGGACTTAGTAG  59 354
    AM1_5861 5926448 .. 5926468 -  -2.7    -5.055   TGAACTGCTAAAAAA            TAAAAATCA AAG TAATTTTCA            CTACAAAAAGCTCCT  70 69
    AM1_5860 NONE
    AM1_5859 NONE
    AM1_5858 5922518 .. 5922538 -  -4.7  -3.40639   AACCTCACTAACCAA            CTGCTTTTC ACC GAAAAGCTA            ACGAATTAAGAGCAT  55 77
    AM1_5857 5921658 .. 5921670 -  -4.1  -3.93369   TGAATGGGAATTAAA                CATCA TCG CGATG                CTGATCCCGATTGAA  59 264
    AM1_5855 NONE
    AM1_5854 NONE
    AM1_5853 NONE
    AM1_5852 NONE
    AM1_5851 5919049 .. 5919060 -  -4.4  -4.59773   TCTCAGCTCCAAAAA                TGAG GCCA CTCA                 CCGTGATGTGGAGTA  68 420
    AM1_5846 5915587 .. 5915598 -  -2.2  -4.16943   TTCCATACTTCAAAA                TACC CTAA GGCA                 ACTGAATATTCCATC  57 68
    AM1_5844 NONE
    AM1_5843 NONE
    AM1_5842 5911891 .. 5911911 -  -5.5  -3.52102   ATTCCATTGAGACAA            TTGCAGA ACCAGTA TCTGCAA            GCCAAGGGAGAGCTT  57 383
    AM1_5837 NONE
    AM1_5829 5905166 .. 5905177 -  -5.8  -2.54193   GAGGATTTTAATTTA                GAGC AACT GCTC                 CCACAGCTCATCAGT  52 211
    AM1_5817 5895794 .. 5895804 -  -5.4  -4.57353   TTCTATCAGATAAAA                 CCAA CTG TTGG                 AACGACTAAATATCG  70 5
    AM1_5815 5895055 .. 5895081 -  -3.8  -3.74872   ACGGATTGCACTAAA         CATTTGTCAA AAATAGA TTGGCAAATG         CATCTCATCCAGATG  56 311
        bchJ 5893220 .. 5893244 -  -6.4  -2.68823   TGGGTTGTAGATAAT          GATCCTCTGC TGTCC GCAGTAGATC          TTCAAATTTAGATTG  54 416
    AM1_5812 NONE
    AM1_5811 NONE
        apcA 5891017 .. 5891027 -  -2.6  -4.61633   AGATACCCTTAAAAA                 TTAT TTG ATAA                 AAATTTGATTACGAA  64 41
    AM1_5808 5889973 .. 5889990 -  -4.9  -3.14404   ACAGGAACGACTTAA             TCTT-GGC TTA GCCGAAGA             GATTTTCAACTAACA  51 15
    AM1_5807 5889345 .. 5889361 -  -5.1  -3.04398   TCCGCTCTTGAAAAT              CCAGACA CAC TGTTTGG              TGAACACTTGGAAGC  52 118
    AM1_5805 NONE
    AM1_5803 5885362 .. 5885409 -  -2.1  -4.59511   AATATGGCCTAAAAA TGC-GCAAGGG-TTTAAAAACGC AAGA GCGTCGTCAATTCCCTTGCAACA CTTCCTTACGAGACC  63 333
    AM1_5798 NONE
    AM1_5797 NONE
    AM1_5796 NONE
    AM1_5795 NONE
    AM1_5794 5876017 .. 5876028 -  -4.4  -4.58242   AAAAAAGCCAGAAAA                CACT ATCC AGTG                 GAAATTATTTGGGTA  68 16
    AM1_5792 5874633 .. 5874646 -  -3.1  -4.06903   AATTCTTAAATCAAA               CTGTA AAAT CACAG                ATTTGTGGTGGATTA  56 481
        gloB 5870638 .. 5870650 -  -4.7  -3.97947   GTGACCTACTACAAA                GCCAC TAA GGGGC                CTGATGGGGTGGGCA  62 195
    AM1_5784 NONE
    AM1_5783 5864912 .. 5864942 -  -2.5  -2.57564   TTACTGTTCTAGAAC       CGACCTAGACAAC CACGC GCCTTCTAAGCCG       CCAACTTTAAGAAGT  41 18
    AM1_5780 5861200 .. 5861219 -  -3.6  -4.62783   CAGGCAGGGGAAAAA            GCTCAAGGT GGA ACCCT-AGC            TAGCGACGGTTTCTT  66 207
    AM1_5776 5857531 .. 5857549 -  -5.9   -3.4072   CATCTTGGACTACAA             CGGGAGG GAGAG CCTCCAG             TAGATGCCATTTTTG  57 460
    AM1_5768 5849726 .. 5849748 -  -4.1    -4.015   CTATTTATTAAACAA           GTAGTGACA TATTT TGTCGCCAC           ACTCACTATGCCATT  59 196
    AM1_5759 5839413 .. 5839432 -    -5  -3.57144   CTCTGTACCTCGAAA            CGTTCACA GCAA TGTGAATG             AATTATCCCAAGTGC  55 450
    AM1_5755 5834378 .. 5834413 -  -9.9  -3.53811   CCTACTGCTCCCAAA    CTCACTGTGTCAGAAT CTTGT ATTCTG-CGCAGTGAG    TTAAGATTACATCCT  74 74
         icd 5830676 .. 5830690 -  -2.8  -3.76224   CGTCGAGGCATCAAA               CATTAC TCA GGAATG               GGAGCTTAGGGTCTC  52 39
    AM1_5746 5823996 .. 5824012 -  -3.7  -4.53047   AGCAAACAGAACAAA              GATTTCG ATT CGAAATA              GTCCTTAAGGTGTTT  65 30
    AM1_5745 5822053 .. 5822063 -  -5.4  -4.82154   AATCTAGATTAAAAA                 CAAC TTA GTTG                 ACAATTTGTCAACCT  75 93
    AM1_5744 NONE
    AM1_5743 NONE
    AM1_5742 5820956 .. 5820986 - -14.2  -4.74453   GAATAGACCTAAAAA       TTTCCCTAGCAACA GAG CGTTACTAGGGAAA       ATGCAATATTCAGTT 100 45
        cobU 5819244 .. 5819259 -  -3.2  -2.86449   ATTTTAGGATAATGA              CATCAG TCTC CAGATG               GCGCTAAAAACACTT  43 54
    AM1_5739 5818625 .. 5818652 -  -5.6  -3.74747   CCAATCTGGACCAAA        CGACTATCTCGCC GTC GGCGATATA-CCG        AGTTTGAAGAGTCTG  59 128
        gyrA NONE
    AM1_5736 NONE
    AM1_5734 NONE
        hisC NONE
    AM1_5732 5812449 .. 5812462 -  -6.7  -3.28924   TACCTTCGGCTACAA               CTGCA AAAG TGCAG                GAGGTGTGGGGATTT  59 318
    AM1_5729 NONE
    AM1_5728 5808464 .. 5808474 -  -5.4  -3.36658   AATATCTCTAAAAAT                 TGCT GCT AGCA                 TGGGATTAGGCTCCT  55 58
    AM1_5727 5806938 .. 5806958 -  -4.8  -3.65827   GAATGCTTAGCTAAA            CTAAGTAG CTTTT CTACTTAA            TTAGTCCAAGCCAAT  57 121
    AM1_5726 5804332 .. 5804348 -  -7.3  -4.10744   TCAGCTAAATAAGAA              GCATCAG AGC CTAATGC              ATCGAGAGGCATTAA  73 437
    AM1_5723 NONE
    AM1_5722 5801715 .. 5801730 -  -4.8   -3.9444   TAAAGTGGAAGTAAA              CAATTT CTTG AAATTG               ATCATCCACTAGACC  61 133
    AM1_5721 NONE
    AM1_5720 5798630 .. 5798644 -  -2.9  -3.68256   GTGCGAGCAAAAAAG               TCAAT AAGCA ATTGA               AATGATAAAAATCTA  50 209
    AM1_5719 5797647 .. 5797657 -  -5.4  -2.91924   GTACTTTTGATAAAT                 CTTG AGG CAAG                 TATTTTGAGAACTTT  52 39
    AM1_5718 NONE
    AM1_5717 NONE
    AM1_5716 5794438 .. 5794450 -  -2.7  -3.36769   AGTGCAAAAAATAAT                CTCAT GCA ATAAG                GCTGTATATAGCGAG  46 70
    AM1_5715 NONE
    AM1_5714 NONE
    AM1_5713 5791182 .. 5791193 -  -5.8  -3.15427   AAGAGCCGCTACTAA                CCTG TTGA CAGG                 CTAAGAGTCCGAACA  55 157
    AM1_5712 5790032 .. 5790048 -  -9.5  -3.26649   ATACTTGGATACCAA              TGGTGAT GGC ATCACCA              CTCAAGCGGATGAAA  70 113
    AM1_5707 NONE
    AM1_5706 5781693 .. 5781713 -  -2.5  -4.82901   TCGGCTGCACAAAAA            CTCTATGGT ACA AGCATTGAG            TGGATCAATGACTCG  67 414
    AM1_5703 NONE
        metK 5774608 .. 5774625 -  -7.7  -3.09516   CTGCCCATTATGGAA             GATGCAG ACTT CTGCACC              AGAATAGTTCAACAC  60 199
    AM1_5700 5771832 .. 5771846 -  -4.2  -3.41961   ATGAGTATTAATTAA               GATGTC TGA GACTTC               CTGCGTTCACATCAT  52 98
    AM1_5699 NONE
    AM1_5698 5768507 .. 5768523 -  -5.1  -3.43007   AGGAGCCAAAATATA              TCCCC AGAGATA GGGGA              GTCTAGCTGAGTCTT  57 39
    AM1_5696 5764931 .. 5764946 -  -3.2  -3.95986   GCGAAGCCAACCAAA              TTGCAG CCCA CTGCTA               AGCTGCTGTTGGTGG  56 48
    AM1_5694 NONE
    AM1_5688 5753571 .. 5753585 -  -4.2  -4.68908   CCTATTCAAAACAAA               CCGTTA CAA TTACGG               ATATTGCTACTGATC  71 374
    AM1_5684 5748297 .. 5748313 -  -5.1   -2.7062   AAGAAGTAATAATAC              CTTCATG CGT CAGGAAG              TTTAATGCGTTATAT  49 364
    AM1_5681 5746645 .. 5746655 -  -2.6  -2.54732   TGCAAAGGCAGCAAC                 TTTA GTG TAAA                 TTCTGGAACTGAACT  41 56
    AM1_5680 NONE
    AM1_5679 5743773 .. 5743785 -  -3.3  -3.83844   CCCAGTAATGAATAA                GTCGT TGT ACGTC                TAGCACTCGCTGTAA  53 204
    AM1_5675 NONE
    AM1_5674 5738024 .. 5738044 -  -4.7  -4.17089   CTGAAAGGGGCAAAA            CTGCAGC AAGCCAA GCTGCAA            GGGGTCAACCTAGGG  64 242
    AM1_5671 5736085 .. 5736106 -  -3.7  -2.89881   GATCGATTTCAGAGA           TGGGAG-TGA TGG TCATCACCCA           GACAAGAGGTGTCCC  45 75
    AM1_5670 5735889 .. 5735905 -  -2.3  -3.08032   TTTGCTGCAAAATTA              GCTTT GTTTCTG AAAGC              GATTGGTGCCAGCAA  43 6
    AM1_5669 5735215 .. 5735249 - -13.1  -2.75844   TTCTTCAGCGCAAAG    CTCGACTGAGCTTCCTG AAC CAG-A-GCTCAGTCGAG    ACTGTTTTCAACAGC  81 273
    AM1_5666 5729697 .. 5729707 -  -4.6  -3.57144   TTTTGCATGCCCAAA                 CCCC TAT GGGA                 AAAATTGCTCAGTGT  55 330
    AM1_5664 5727977 .. 5727993 -  -4.4  -3.71873   CGATTGAGAGCCAAA              CTGGAA GAGGA TCCCAG              TAATCCTGAACTGAT  55 182
        radA NONE
    AM1_5661 NONE
    AM1_5660 5724502 .. 5724518 -  -3.7  -3.55444   TGTTGATGCTTGAAA              GAGATGA AGT TGATCTC              CAGGCTAGCTATACT  51 34
    AM1_5659 NONE
    AM1_5658 5722595 .. 5722605 -  -5.4  -3.53012   CGCTCTGCTCTCAAA                 GCTA AGC TAGC                 TGTTTGATTGAGCTT  57 39
        pyrC 5708529 .. 5708543 -  -4.2  -3.87815   GGGCATTTTTATAAA               GCGTTG GCT CAACCC               CATACCACGAAGGCC  57 162
    AM1_5641 5701056 .. 5701094 - -17.1  -3.03453   GAGAACCGATACACA  TTA-CACTGCCATCATTG TCAT CAATGATGGCAGTGATAA   AGGAGCAATTTCAGG 100 419
    AM1_5638 NONE
    AM1_5637 5696984 .. 5697000 -  -4.3  -4.24204   GATGCAGATCTAAAA              GGGGCCA CCT TACCCCC              TAGATATCGGAGAAA  62 126
    AM1_5630 5691303 .. 5691313 -  -5.4  -2.58544   GGCCATTTCGATAAG                 CCAA CTG TTGG                 AATCCATCCAGGTTA  49 95
    AM1_5629 NONE
    AM1_5628 5689142 .. 5689154 -  -3.4  -3.40597   GTTCCTAGCCAAACA                GTTC CCAAT GAAC                TCAAGCCACAGAGCA  48 161
    AM1_5626 NONE
    AM1_5625 5685669 .. 5685688 -  -7.8  -4.11751   AGGAATTGGGGAAAA            GTTTGGGC CTCA GCCCAGAC             TTCGCTGCCAGAATC  73 228
    AM1_5622 5682261 .. 5682271 -    -4  -3.36492   CTTCTAACCGGACAA                 GATA TTT TATC                 GGGTTTACGCCATCA  50 499
    AM1_5615 5676041 .. 5676051 -  -6.8  -3.18735   TGAATACCGGATCAA                 CTGG GGG CCAG                 GATACCGTATCTACC  59 70
         sun 5674228 .. 5674246 -  -4.6   -3.7108   ATTTCGAGACCTAAA             CGTAAAAC CTA GTTTTATG             AAGTACTAATAATTA  57 77
    AM1_5612 NONE
    AM1_5611 5673176 .. 5673189 -  -6.7  -3.63895   GGTAACTAGGGCAAA               GCTGA TGTC TCAGC                CCTAGTTATCATCGC  65 133
    AM1_5609 5672713 .. 5672723 -  -2.4  -2.61727   ATTGATGACAAGGTA                 GGGG TTA CTCC                 TAATAGGTTTCAAAG  40 25
    AM1_5608 NONE
    AM1_5607 NONE
    AM1_5605 5669087 .. 5669104 -  -4.1  -4.24294   ATCAATGATCCAAAA             CTCGTCT TTTT AGATGAG              CCCATGTCAGGACTC  62 457
    AM1_5603 NONE
    AM1_5602 NONE
    AM1_5601 5661659 .. 5661670 -  -4.4   -3.6682   CTTCATCTATCCAAA                CCAT AGGA ATGG                 TAGTGAGAGGCAAGT  54 141
    AM1_5590 NONE
    AM1_5588 NONE
    AM1_5587 5646832 .. 5646842 -    -4  -4.70659   CTTCATACCTAAAAA                 TTCA GGC TGAA                 GTTAGTACTGGATAT  68 27
    AM1_5586 5645316 .. 5645330 -  -2.1  -3.16151   GTAAGCAGGAAGATA               GCCTA AAGAA TAGAC               ACCCACCAGAAATAG  43 290
    AM1_5584 5643968 .. 5643978 -  -5.4  -3.98804   CTAAATTCGAAAGAA                 GAAC TCT GTTC                 GGGAGGGAGCAAGGC  63 81
    AM1_5578 5634296 .. 5634316 -  -2.6  -3.76182   CGATTTAGAAAAAAT           CATCAGCCA TGCG TGGC-AATG            GCATCAAAAGCGCCA  52 48
    AM1_5573 NONE
    AM1_5572 NONE
    AM1_5570 5629211 .. 5629232 -  -4.5  -2.66733   CCCGAACCCACACCA           GAAACCAGT TCAC ACTAATTTC            TAGCCAGATTGTTGC  48 18
    AM1_5569 5625039 .. 5625049 -  -3.2  -3.89131   CCAAGAATGAGTAAA                 CTGA TGA CCAG                 GAAGAATATTTTTGG  53 45
    AM1_5567 5623441 .. 5623451 -  -5.4  -3.55262   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 8
    AM1_5565 5620145 .. 5620167 -  -9.8  -5.29846   AACCTTAAAGAAAAA           GCGCCCTACT CTA AGCAGGGTGC           TTTTTTGAAGCTTTA 100 100
    AM1_5563 5614973 .. 5614985 -  -3.4  -3.04792   GGAGGATGGCCAACA                GACA TAATT TGTC                TTTCTCCAAAGATGT  44 148
    AM1_5562 NONE
    AM1_5561 5612439 .. 5612475 - -11.8  -3.54489   GTAATGCGAAACTAA    CCAAGTACTTGCCA TATTGAGCT TGGCAAATACTTGG    TAAAGGTAGACTAAC  91 95
    AM1_5560 5611070 .. 5611104 -  -2.9  -3.97947   CCCATCCAGGAGAAA     TTGTTGACCAAGA GGGCAATAT TCTTGGTCATCAC     CAAGGGGTGCATCAT  56 429
    AM1_5557 5609740 .. 5609755 -  -3.3  -3.80174   ATACCCTCACAACAA              GAATG GCGTCA CATTC               CTATGATTTGTTGCC  55 123
        rpsU 5609312 .. 5609341 - -12.9  -3.27475   TTGTCCACCACAACA       GCCACTGCCTC TTCTAAGG GAGGCAGCGGC        TTAAAAACTATTTGC 100 97
        ilvC 5607979 .. 5607990 -  -5.8  -4.15854   AAACGCACTCCAAAA                CTGG TGTA CCAG                 AATCCAAAACCCGAG  69 201
    AM1_5553 5604961 .. 5604972 -    -3  -3.92659   CTTCGAAAATCCAAA                TCTT ATCC AAGA                 AGGGAAATTGGAAGT  54 396
    AM1_5550 NONE
    AM1_5549 NONE
    AM1_5548 NONE
    AM1_5547 NONE
    AM1_5546 NONE
    AM1_5545 5594212 .. 5594223 -    -3  -3.55563   ATTTGATGTTCCAAA                TTGA ATCC TCAA                 CGTGGCGCCAACCCG  49 287
         rnz 5591445 .. 5591469 -  -2.2  -4.36914   TTTTCTCCGATAAAA         CAGCTGTAGAA AGCC TTTTAC-GCTG          TTGTAAGAGTGCGAC  58 18
    AM1_5542 5590936 .. 5590967 - -13.3  -3.10512   ATTCCTAATAAAGGA      TTCAACTGTTTCT TTGTAC AGAAACAGTTGAA       TAGAAAAATCTTGCT 100 48
    AM1_5541 5589372 .. 5589410 - -20.6  -2.88249   CAGATGTCCCATACA   GAAAACATTACGGCAAAC TGG GTGTGCCGTAATGTTTTC   TTATCAAAAAAGCAG 100 64
    AM1_5540 NONE
    AM1_5539 5587174 .. 5587195 -  -2.9  -3.29144   TGATCCTTGCCATAA           TTGGAGCTC ACCA GTTCTCCAA            TCAACAAGACTAAAC  46 83
    AM1_5532 5582496 .. 5582518 -  -6.5  -3.57263   AGCTTTATTCTTAAA           CTAATTTTT TGCAT AAAAATTAG           ATTCATTGCTGATAT  61 106
    AM1_5531 5580585 .. 5580626 - -14.5   -5.0916   TTCTCAACATAAAAA TTAAGGCCGGACTGGTTCT TAAT AGAGCTAGTCCGGCCTTAT  ATGGTCGAAAGGGGA 100 47
        uvrB 5577905 .. 5577915 -  -2.4  -3.26036   TGGATAAAAAAAGAT                 GGAC TTA GACC                 TGGCCTAAGGTGATA  45 65
    AM1_5528 5575489 .. 5575501 -  -3.4  -3.89614   CTGAATCTCCAGAAA                GCTT CCAGT AAGC                CCAGGAGCTAGCCTC  53 58
         pip NONE
    AM1_5524 NONE
        acpP 5571189 .. 5571214 - -14.1  -2.71011   AGGGGTTGGCAATCA         TGCTGCATGCT CTCT AGCACGCAGCA          TGATTGCTAAGCCTT  95 32
        fabF 5569826 .. 5569848 -  -9.2  -4.57073   TATGGGCGTCAAAAA           GAGGCTTG GTACAGA CAAGCCTC           AAATACAGATGCCAT  95 61
        tktA 5567680 .. 5567705 - -14.1  -5.61596   ACCCTCATAAAAAAA         CAGTCCCCCTA GCAA TAGGAGGACTG          CGAACCAAATGATTC 100 51
    AM1_5519 NONE
    AM1_5517 5565475 .. 5565506 -  -4.4  -3.95073   GTGTATATCCACAAA      GGGGTTAGCCTGAT GGGC ATTAGGCTAAGACC       TGGCACTCAGATCAA  57 452
        psbN 5561698 .. 5561724 -  -2.3  -4.08064   AAGCGTGCCCCAAAA         GGCATCTTATT TAACT AAAAACATGCC         TGAATGGGGAATTAA  55 37
        ompA 5559950 .. 5559960 -  -6.8  -3.39895   GCTGCTATCAAGCAA                 CGCT TGC AGCG                 CAATCCCCGGACGGT  59 150
    AM1_5505 5555067 .. 5555085 -  -2.4  -3.75093   CAGAGAAGACAAATA             CCTACTCA ATT CAAGTAGA             GGTTTGATTCAGCTC  51 34
    AM1_5504 NONE
    AM1_5503 NONE
    AM1_5502 NONE
    AM1_5501 5552271 .. 5552288 -  -5.5  -2.68544   AACATGAACAAGTGA             TTTGGGG CCAG CCCCAAT              CTGTGAAAGATCAGG  48 198
    AM1_5498 5549851 .. 5549863 -  -6.3   -4.4648   AGTTTTAGCATAAAA                TGAAC GGC GTTCA                TTTTATGAGCATAAA  74 140
         gmk NONE
    AM1_5495 5548489 .. 5548503 -  -5.6  -2.59742   CCGAATTCGGATAAT               GTCCGG TTT CCCGAC               CGAGAAACAGTTCTT  52 182
    AM1_5494 5547737 .. 5547750 -  -9.5  -5.55769   TTGGACAATAAAAAA               CCCCC TGAC GGGGG                TTGGAAATCGCAGTC 100 56
    AM1_5492 5547374 .. 5547384 -  -2.4  -3.32698   TCAGGTCACAGAAGA                 GGCG CCT CGGC                 GGTTGAATTACGCCA  45 254
        glnB 5546171 .. 5546188 -  -4.9  -3.14463   AAGGGGTTTGAGCAA             CTCACATC AAA GATG-GAG             GCATTTTGCTGTCCA  50 193
    AM1_5488 5544049 .. 5544060 -  -4.4  -4.13728   GACATATGTTGAAAA                GCTA TGTT TAGC                 AATAACCTCAACGGG  61 116
        recA 5540467 .. 5540487 -  -9.7  -5.58454   CTTAGATTAAAAAAA            GGGCATGGA AGA CCCATACCC            TGATTGGTCTCTGTT 100 48
    AM1_5481 NONE
    AM1_5479 5536274 .. 5536292 -  -5.3  -3.86346   GTATCGGTTGAGAAA            TCCCC-CA ATTC TGAGGGGA             AAGGTACCACCTCCA  61 307
    AM1_5474 5531554 .. 5531564 -  -5.4  -3.30124   TCCTACTTTGCACAA                 TCTG ATC CAGA                 TATTGAAGAAGAAGG  54 314
    AM1_5471 5529992 .. 5530002 -  -6.8  -3.37522   AGGTGATTTAATCAA                 GCAG CAT CTGC                 AATGTCAAAGTCCAT  61 11
    AM1_5469 NONE
    AM1_5468 5525265 .. 5525286 -  -4.5  -3.20367   CAAGAAGTTGATCAA           GCAGAACCCT TCA AAGGTT-TGC           TCTATAGGTTCTAGG  51 14
    AM1_5467 5523706 .. 5523718 -  -7.7  -2.72043   AACCGCTTCTGAAAT                CCGTT CAA AACGG                GGCACCTGAACTATT  60 131
    AM1_5466 5522371 .. 5522396 -  -7.5  -2.96899   GCTGAACGAATCACA         CTCAGGTGTTG TAAG CTACACCTGTG          ATGCGGGGTAGACCT  61 313
    AM1_5464 5521485 .. 5521496 -  -2.2  -5.61689   AAAATCAAGAAAAAA                GCCT GCAA AAGC                 CCTACCACAGCTAAA  82 308
    AM1_5461 5520043 .. 5520053 -  -8.2  -2.53876   CGGCAGGCCAAGTGA                 GCCG ATA CGGC                 TATGGTCAAGGCTTC  60 111
    AM1_5460 5517147 .. 5517158 -  -5.8  -4.22948   AAAAGCGATTCAAAA                GGCT TAGA AGCC                 ACAACACTGACAGTT  68 139
    AM1_5459 5516469 .. 5516485 -  -9.5  -2.77629   AGATCAAATCACAAC              TCATTCC ACA GGAATGA              TTGCAATACCAGAGT  70 151
        lysS NONE
    AM1_5457 5513999 .. 5514018 -  -7.8  -3.09516   GGGTTGATCAGGCAA            GTCCCCCA CTGG TGGGGGAT             TTAGGGGGCCATCAG  63 117
    AM1_5452 NONE
    AM1_5451 NONE
    AM1_5450 5508715 .. 5508728 -  -5.3  -3.42503   GCCCAAGAGGGAGAA               GAAGA GTTT TCTTC                GGTGGCAACCCGGTT  54 183
    AM1_5447 NONE
    AM1_5446 5502714 .. 5502733 -  -3.6  -4.39571   TCGAGAAACCCAAAA            GCAATTTT GAAC AATATTGC             GAAGAGTTCCCCAAT  63 88
    AM1_5441 5500533 .. 5500546 -  -6.7  -3.18065   AGTACACACACCCAA               CTGGA CAAA TCCAG                ATCACGAGAGGAGTC  59 52
    AM1_5440 5499244 .. 5499256 -  -3.3  -4.08767   TCTATCTGCTCAAAA                GCAGG ATT CTTGC                ATCTGATCGTGCCTC  58 311
    AM1_5438 5497783 .. 5497797 -  -2.8  -4.05389   GACAGATACCACAAA               CAATAG AGG CGATTG               CTGCTTGAGAGACCG  54 357
    AM1_5437 NONE
    AM1_5436 5494975 .. 5495004 - -10.1  -4.79451   ATTTCAAACACAAAA       GCGCCAAGAGTAAC AAG GCT-CTCTTAGCGC       TTTTTTTGATGCCAG 100 51
    AM1_5435 5494094 .. 5494108 -    -5  -2.78996   GATGGTTAGCCAAAT               TGACAA GAA TTGCCA               TATTGCCCGTTAAAT  49 332
    AM1_5434 5490766 .. 5490802 - -18.5   -3.4015   ATAAGAAGCTCATAA    TATCAGTCAATAAAATA AGT TATTTTATTGACTGATA    ATCTTAAAGCTCTTT 100 29
    AM1_5433 5489236 .. 5489247 -    -3  -3.70902   GGTTTGATATGTAAA                TTTG ATAT CAAA                 ATTAATGAAGATTTT  51 146
    AM1_5431 5487541 .. 5487551 -  -5.4  -3.16328   CATTAAATACAGATA                 GAGT ATG ACTC                 AGGGACAGTACTCAG  53 289
    AM1_5430 NONE
    AM1_5429 NONE
    AM1_5428 5485626 .. 5485636 -  -3.2  -3.28708   GAAAGTTCAGATCAA                 CAGC CCT GCTA                 TTGCGCGCTACAAGA  47 103
    AM1_5427 5484485 .. 5484504 -  -5.8  -2.76093   AAGGTTAAGAGATTA            TTAGCCTT GATC AAGACTAA             TATCACCAGCACTCC  53 441
    AM1_5426 5483263 .. 5483276 -  -3.8  -2.66249   CTGGAGGAAGAAGAT               TCGG ACGTAA CCGA                GGCATTTATTAAAGA  44 508
    AM1_5424 5479922 .. 5479934 -  -7.7  -4.15508   AAGCAAGGTCTAAAA                GATCG GAC CGATC                AATCCTTACGTCCCA  75 333
    AM1_5419 5476605 .. 5476619 -  -4.2   -4.1196   AAGTTAGGTGTAAAA               CACTGA AAA TCAGGG               ATATTTACACCTGTT  61 60
    AM1_5418 5475732 .. 5475752 -  -3.9   -3.4072   CAGGTCCTATGAGAA            CAGTTCCAA CCA TTGGTTCTG            TGGGATTTTGGTAAG  51 175
    AM1_5416 5474553 .. 5474571 - -14.6  -2.96711   GCGACAAGTCAGATA             CCTCCGGT AAA ACCGGAGG             CTTGAATTAGAACCC 100 58
    AM1_5414 5473128 .. 5473143 -  -6.2  -4.23758   ATTGGAGATGTAAAA              CTCTTT CTGA AAAGAG               GTGAGCCATCTCAAT  69 103
        carB 5469413 .. 5469423 -  -6.8  -4.14392   CCTTAACTTGGAAAA                 CCCA GAC TGGG                 AAGTGGCCTTTGATG  71 223
    AM1_5411 5468139 .. 5468164 -  -3.2  -3.34895   GGTAGCCTTAAGGAA         GCAGGCCCAT CATATT ATGGGTTTGC          CCTATTGGTATTTAA  48 152
    AM1_5409 5467200 .. 5467210 -    -4  -2.72028   TCTACCAGAAAAATG                 GATT TGA AATC                 GCTCGCACACAAAAG  44 478
    AM1_5406 5465165 .. 5465175 -  -6.8  -3.77196   CCAGCAGGCATTAAA                 GTGG ACC CCAC                 TGATTGGGCAATTTT  67 152
        infC 5464351 .. 5464363 -  -3.4  -4.19371   GAAATCTCTAATAAA                CCTT TACCC AAGG                TGACCAGCTACGACG  60 189
    AM1_5401 5461260 .. 5461285 -   -12  -3.90741   TACAAATAAAAGTAA         TCCCCTATTG GTTAAT CAATAGGGGA          TTTTTTGGGAATCCC 100 11
    AM1_5398 5459721 .. 5459735 -  -2.9  -3.72678   CAAATAGTATTCAAA               TAGAA AGAGA TTCTA               TTTTTTTAATTCACT  50 344
    AM1_5397 5459306 .. 5459352 - -14.8   -3.1881   ATAAGAAAACAATTA TTG-CAACTTTCCTCATTCTC CTTTGC GAGAATGAGGAAAGTTGTCTA TCGACTCAATCGAGC 100 23
    AM1_5396 NONE
    AM1_5395 5457328 .. 5457339 -  -4.4  -3.12856   AACGAAGATAAAGCA                TTCC ATAT GGAA                 TCAATATCTACCCTA  49 107
    AM1_5391 NONE
    AM1_5390 5452249 .. 5452261 -  -4.1  -4.11216   GGCTTATCCGCAAAA                TCCGA ACC TCAGA                TTTTAGGAAAGATCA  61 120
    AM1_5389 5450734 .. 5450748 -  -4.2  -3.26947   CAACCCCCACAGCAA               CGGTCC CAC AGACCA               TCTATACCGTCGCAA  51 81
    AM1_5388 5449067 .. 5449102 -  -6.2  -3.04461   TACCTATGGTGAATA    CGAACTTGCGATCGC ACGCAAA GCGATCACA-GCCCG    CAAACCCTAACCCCC  56 40
        ndhF NONE
        ndhM NONE
    AM1_5377 5435987 .. 5436000 -  -2.4  -4.46835   ATAATCTCAAACAAA               TGAG CTATTC CTCA                TACCAAAGAGAAGCA  60 138
    AM1_5375 5433847 .. 5433869 -  -3.2  -3.89822   TAGGGACGGGACAAA           TGGTCCGACC CGT GGTTGGTCCC           ATTACGAGTAATTTT  55 380
        aroB 5431442 .. 5431456 -  -2.2  -3.51475   TAAAGAACAAACAGA               TAATTA ACT TAATCA               CTATTACATCGTCAA  47 135
    AM1_5368 5426053 .. 5426066 -  -8.1  -3.01712   GTTGGGGCTGGAATA               GCTGC GATC GCAGC                GGGTAACCATGCACA  60 435
    AM1_5361 5419731 .. 5419751 -  -2.6  -2.56288   AAATTACGGAAGTTA            TTGTTACA TTTGC TGTGACAA            AATATAGCCTGTTAT  41 139
    AM1_5360 NONE
    AM1_5359 5416152 .. 5416162 -  -3.2   -2.5409   AGAATCGGTAATTCA                 GACA TCA TGCC                 CCTCTGTTCTTGATG  42 131
    AM1_5358 NONE
    AM1_5357 5413979 .. 5413992 -  -3.1  -3.83705   AAAACTATTACCAAA               CCAAC TCTA ATTGG                TATCGCTTTTACCGG  54 122
    AM1_5355 5412756 .. 5412788 -  -7.8  -2.73797   ATCTATAGAAATTCA      CCCAATTCTGGCCA AATCA TAGTCAGAATTGAG      CATGGTAACACTTAA  61 190
    AM1_5354 5411543 .. 5411567 -   -10  -3.09933   CTCTAATGCATTGAA          CCCCGGCA GGCGGTATT TGCCGGGG          TTTGTCTTTAGCCAT  74 518
        rplI NONE
        dnaB 5407792 .. 5407817 -  -6.1  -3.75657   GTAAAGATTCAACAA         GCCCTCAGT TATCGACT ACTGGGGGC          TTTTTACTGCATTAA  65 37
    AM1_5346 5405518 .. 5405540 -  -4.8  -4.14511   AATCCTATGGGAAAA           GTTCCAGCAA TGG TAGATGGAAC           TTTTAAATTATGGGA  64 448
    AM1_5341 5402853 .. 5402863 -  -5.4  -3.21912   TGGGCAATTTATTAA                 CAGA TCA TCTG                 CAAGTCGGCGTTCTA  53 50
    AM1_5340 5402019 .. 5402036 -  -4.1  -3.89756   AGCTTAAAGGAACAA             TCTAAGG ACAA CCTGAGA              GAGTATAGATGGCAC  57 79
    AM1_5339 5400643 .. 5400654 -  -5.8  -4.52349   AGAAACAAATAGAAA                GCCT ATAA AGGC                 CAGCCATCACCACTG  73 271
    AM1_5338 5400051 .. 5400081 - -10.5  -3.41229   AGATTCGCACCAGAA       TGTGTAGCCCCGA GGGAT TGAGGGCTACACA       TTTAAGACAGCACAC  80 105
    AM1_5334 5397936 .. 5397967 -  -7.2   -3.4678   ATTGCTACAGGAGAA      GATG-CCCAACGGCT TAA AGCCGAAGGGGCACC      AGTGGTACTCCCCCA  64 89
    AM1_5333 5396343 .. 5396375 -    -4  -3.86311   ATAGTGAAAGTCAAA     CGGGGTAGCCAAACC AATA GGAATGG-TCCCCCG      TTAATATGTTCTTTT  57 64
    AM1_5331 5395992 .. 5396012 -  -7.5  -2.81966   CGAAACGTGATGATA            GGAGCAGAG CAA CGCTACTCC            AACTGGCTCAGCGTT  57 68
    AM1_5329 NONE
        atpD NONE
        atpC 5392051 .. 5392082 - -10.8  -5.63504   AATTCCATAAAAAAA      GAACTGAGCCCTGC TAGT GCAAGGCTCAGAAC       AGTCAACAACCAATG 100 45
    AM1_5326 5391386 .. 5391396 -  -3.2  -4.08958   ATCGTCAAACAATAA                 CCTC AAA GAGA                 GATGTATCAGTCCTG  58 400
    AM1_5325 NONE
    AM1_5324 NONE
    AM1_5322 5387704 .. 5387733 -  -4.9  -4.59773   GGCCACCGTGAAAAA       CCCAAC-GGACGGC GTT ACCCTCCTGCCGGG       GAAAGCGAATATTTT  71 474
    AM1_5320 5384666 .. 5384683 -  -2.1  -2.52279   TGACCAAAGACATAC             TGAT-AGA CCA TCTAATCA             ATCTCATATCTATTT  39 42
    AM1_5319 5383652 .. 5383679 -  -3.4  -3.68351   GCGTCAGCATTGAAA        GTTGCGATCGCA AGAC TGGAATCCCAAC         TCCAACCTCCAACCC  53 158
         add NONE
    AM1_5315 5379504 .. 5379517 -  -6.7  -2.66291   TAGATAGTCAGATCA               CCCAT TTCA ATGGG                CAACTGATTTTTGTT  56 523
    AM1_5314 5378651 .. 5378661 -  -6.8  -3.18681   CGTTAACTCGACCAA                 CGGT GGC ACCG                 ACTGTGTTGATGGAG  57 216
        pcyA 5374448 .. 5374461 -  -3.1  -3.03243   AGCCAGCTCTTAAGA               TCCTG GATC CAAGA                GCTGGTTAGTCATTT  44 496
    AM1_5309 NONE
    AM1_5308 5370065 .. 5370081 -  -2.9  -4.44448   AGGATCTGAAACAAA              GCCTATG GTC CCTAAGC              TGAGCTAGCTTCTAA  61 37
    AM1_5306 5369279 .. 5369291 -  -3.4  -3.29626   GAACAGTTAGAGCAA                CATC TCGCC GATG                CCCAGCTAAAGCTCA  48 144
    AM1_5303 5366053 .. 5366075 -  -2.6  -2.87132   TTGCGGCGGGATATA           CCCCCCCA GAACAAA TGGATGGG           AGAACGGTTCAGCAG  42 458
    AM1_5301 NONE
    AM1_5300 NONE
    AM1_5299 5362189 .. 5362199 -  -3.2  -3.31625   TAAATCAATCAGGAA                 CAAG TTC CCTG                 GAGTAGTGAAAACGT  47 131
    AM1_5296 5360066 .. 5360080 -  -2.8  -3.06796   TGTGAGGTGAGGTAA               GAGTCT TGC AGAATC               AACTTTCTCTAGTTT  43 262
    AM1_5294 5358977 .. 5359006 -  -6.4  -3.16676   TCGACCAACTCAATA       CCCATCGCTC TGCTTCCTTG GTGCGATGGG        TTGCTGCTTGTTGCG  57 317
    AM1_5292 5357412 .. 5357422 -  -6.8  -2.50816   TCTCGATTTACCAAC                 TGCC TCC GGCA                 CCACCGCCACCACTG  55 7
    AM1_5291 NONE
    AM1_5290 5355605 .. 5355635 - -14.2   -4.2828   TTTTATTGAGTAAAA       TTGCAGCAGTATTT TGA AAAGACTGCTGCAA       TTTTTATATCTACTA 100 38
    AM1_5288 5353943 .. 5353953 -  -5.4  -3.13007   AGCATTGAAAATAAG                 CCAA TCA TTGG                 AGTCAAACAGTTCAT  53 227
    AM1_5284 5352052 .. 5352064 -  -4.9   -3.4968   ACCACAAAAATTCAA                TGATT CAC AATCA                AGGCATTCAGGCCGT  55 9
    AM1_5281 5350574 .. 5350587 -  -6.7  -3.36492   TGGTGAACCTTACAA               TCACG GTTT CGTGA                CAAAACCTGATGATC  61 12
    AM1_5279 5348787 .. 5348797 -  -5.4  -3.55262   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 8
    AM1_5271 5340952 .. 5340977 -  -7.8   -2.6544   CACTAGAAGACTAAT         TTCAGATATT CCTAGT AATATCTGAA          TCGCCCATCAGATTG  60 52
    AM1_5270 5339775 .. 5339789 -  -4.2   -2.6583   CATACCCCAAATTCA               TCAGTC TTG GACAGA               TTTTATCGATATCTT  45 358
    AM1_5267 5337505 .. 5337516 -  -5.8  -3.39895   TTGTTGAGTAAGGAA                CGAG ATAG CTCG                 GCTCAAAGTGCTGAA  57 517
        rumA NONE
        gltS NONE
    AM1_5263 5332806 .. 5332818 - -10.5  -3.67141   AGAATTTTACTTAAA                CGGCC ATA GGCCG                ATTCTAACATTGAAT  82 113
    AM1_5262 NONE
    AM1_5261 5330579 .. 5330590 -    -3  -4.24204   GATCGATACTCAAAA                CTTA TAGG TAAG                 AAAACTAAGAAACCT  58 30
    AM1_5259 5328884 .. 5328915 - -16.8  -2.90392   CATTGGCTAATTACA      GTTCAGGGAGCAAGT TTG ACTTGCTCCCTGA-C      GTTTAAATGGTTTTT 100 110
        ruvC 5326511 .. 5326536 - -11.9  -3.97088   TCCCAGAACAGGAAA         GCCCCTAGCAA ATAA TTTCTAGGGGC          AGCTATGGCTTATCA 100 189
    AM1_5254 5323709 .. 5323721 -  -7.7  -2.67456   AGAGATCATCACAAC                CCCAT CCA ATGGG                CCACTCAGATTTCCT  60 73
    AM1_5253 NONE
    AM1_5252 NONE
    AM1_5249 5315939 .. 5315949 -  -5.4  -3.90922   ATTTTCTTGAAAGAA                 TGCA TGG TGCA                 GCTTACGCAAGAATA  63 296
    AM1_5248 5313251 .. 5313289 - -14.8  -4.89063   CGATCCAAAAACAAA   CTGTAAACCCTATGAGAC TCC ATCCCACAGGGTTTACAA   TCAATCTGACAATCG 100 213
    AM1_5247 NONE
    AM1_5246 NONE
    AM1_5245 NONE
    AM1_5244 5310184 .. 5310195 -    -3  -3.34029   CAAAGATGCTGACAA                GTTT GATC AAAC                 CATTGCCAACAGTCA  47 189
    AM1_5238 5306645 .. 5306657 -  -6.3  -3.62522   CAATGGTCCCAAGAA                TCCTA TCC TAGGA                CGGGGGATGATTATC  63 113
    AM1_5235 5302094 .. 5302107 -  -5.3  -4.68384   ATGTAGCCAATAAAA               GCTAA GTCC TTAGC                TAAGTCCTTATGGCT  73 42
    AM1_5233 5299795 .. 5299827 -  -4.2  -4.19276   CCAAAATCCTCAAAA     CCATT-CCAGGCCAA AATG TAGGCCTAACAATGG      GCATAATCTTTATTG  62 433
    AM1_5229 NONE
    AM1_5228 5294172 .. 5294183 -  -2.2  -2.95073   TTGGCAAGAGCAAAG                GACA TTAT TGCC                 ACGTTATTCCTGCTG  42 29
    AM1_5227 5291344 .. 5291356 -  -6.9  -2.53263   GTCAGCCTCAATTCA                CCAGC AAT GCCGG                TTGGGGCAAAGTCTG  55 5
    AM1_5226 5290772 .. 5290783 -  -4.4  -2.58767   GTAATGATCAATGGA                GATC TTGA GATC                 GGTTCATGGCAGATG  45 6
        recG 5288236 .. 5288249 -  -5.3  -4.45485   ATGATACCCATAAAA               TTGCA TTGT TGCAA                ATCTATGTAAAAATT  70 28
    AM1_5224 5287485 .. 5287498 -  -6.7  -3.60818   TGAAAATTGCTCAAA               TGGTG ATTG CACCA                ATTATGCGAGCCGAG  61 200
    AM1_5218 5283752 .. 5283780 -  -6.6  -3.45054   GCTTATAACGCAGAA        GCCCCAGCACCT AGTGG AGGTGTGGGAGC        GAGTAGAGGCATTCT  61 318
    AM1_5213 NONE
    AM1_5212 5275899 .. 5275915 -  -6.5  -3.54307   AATAGTCCTCCTAAA              GTTCGTG GAT CTCGAAC              CTCACCTTTTATTCA  61 34
    AM1_5211 5273674 .. 5273686 -  -4.7  -5.02439   AGAGAACGATAAAAA                GTGGC CTA GCCCC                TAAAACAACTTGTGA  77 25
    AM1_5209 5271381 .. 5271394 -  -2.3   -4.8622   CGGGTTAATCAAAAA               GCTGC TGGC GCAGG                CAATCGAATTCTGCA  66 1
    AM1_5207 5267524 .. 5267550 -  -7.1   -3.0693   CGCCAAAGCAAAGTA         GGGCCGCCCGG ATGGA CCAGGCTTCCC         TCAGCTTCCCTCGGT  61 91
    AM1_5204 5265570 .. 5265585 -    -4  -3.63744   TGGCCCTCCAAAATA              CCAACT ACCC AGTTAG               GTGCAGAAGAAAGGT  54 84
    AM1_5203 5264901 .. 5264920 - -12.8  -3.10481   TTATAGACAAACAAG            CCCCCGCC ATTT AGCGGGGG             TTATATGCTTTAAAG  95 76
    AM1_5199 5261457 .. 5261468 -    -3  -4.80656   ATCAAGAAGATAAAA                TATC AATA GATA                 TGGCTCACCTTAGCT  68 53
    AM1_5198 5260773 .. 5260803 -  -9.8  -2.79983   GGAGACAATATAGCA       TCGCTGTTGCTCAG GTA CTAAGCAACAAGGA       GGGACATCAGGAATC  72 103
    AM1_5197 5260288 .. 5260302 -  -4.2  -2.86492   TCATAGGGATGAAAC               TCTCGT GCT ACGGGA               CAAATACTACGTCCA  46 65
    AM1_5196 NONE
    AM1_5194 5258533 .. 5258546 -  -3.7  -3.22298   GGCAGGGATCATCAA               CTGGC TACG GCCGG                GCTGGCGTTGGAATA  46 419
    AM1_5191 5255235 .. 5255253 -    -6  -3.23452   ACCCTGAGAACGGAA             CGATATTG AGT CTATATCG             ATCTACTCGGAAACA  55 28
    AM1_5190 5254134 .. 5254144 -    -4   -2.6563   CCTTTGAAGAATTTA                 TAAC TAG GTTA                 TTTTATCTGCACTCA  45 129
    AM1_5189 5252881 .. 5252891 -  -4.6  -4.17002   GATCAAACTAAAGAA                 CGGA TCC CCCG                 ACCGGCCTGAGAACT  63 206
        mreC NONE
    AM1_5187 NONE
         dxs NONE
        mtnA NONE
    AM1_5184 NONE
    AM1_5183 5247344 .. 5247354 -  -2.4  -4.19678   TGAGACCTGAATAAA                 CCAG CAT CGGG                 GATAGACCAATCTTT  55 47
    AM1_5180 NONE
    AM1_5179 5243402 .. 5243415 -  -3.1  -3.28712   CCGGTCTGGGGACAA               GCT-GC TCG GCTAGC               GATGGAGTTATGGTT  47 165
    AM1_5177 5240909 .. 5240922 -  -2.3  -4.25104   GGTCTTGGATTAAAA               GTCGC ATCC GCCAC                CAATTAGACCATTTT  57 125
    AM1_5171 5234642 .. 5234652 -  -2.4  -3.52079   GAATATTTTACACAA                 TGCG ATT CGCT                 ATTCCCCCGAGGATG  47 318
    AM1_5169 5232532 .. 5232564 - -12.2  -3.54459   TTAATCCTGCTGAAA      TATCCTGTTTGCAA GGCTT TGGCAAACAGGATA      AGAGACTTAAAAAAA  91 214
        nrtA NONE
        nrtB NONE
        nrtC NONE
        cynS 5228405 .. 5228431 -  -4.4   -4.1552   CAGGCTTGGAACAAA         GAAGGCGG AAATTTTAAAG CCGCCCTC         AGCCAAGACCCACAG  62 144
    AM1_5160 NONE
    AM1_5159 5222488 .. 5222515 -  -3.5  -2.61602   GGAATTTATAATCCA        GGCATCGACCAA AACGA TTGGTCAAC-CC        ACAGCTCCATGTTAG  42 79
    AM1_5154 NONE
    AM1_5153 5213668 .. 5213685 -  -3.4  -4.56133   CTCCAAGAAGGAAAA             GTGTGGG GCTTA CCCAC-C             TCCTGAATTTTCAGG  63 329
    AM1_5148 5210477 .. 5210489 -  -7.7  -4.18018   TTGGGGGATTGAAAA                CCAGT TGC ACTGG                ATTTTGGATGTGGGA  75 321
    AM1_5145 5206771 .. 5206781 -  -5.4  -2.79878   TTGAGGTACCTAAAT                 CTCT TCT AGAG                 GGCATCCTATCATCG  50 93
        psaD 5206215 .. 5206243 -  -7.3  -5.94597   CAATATCAAAAAAAA        GTTGAACCCCACC AAT GGAGGGGTTCATA        AAGTAGAAGAAAAAA 100 92
        trpE NONE
    AM1_5141 5204186 .. 5204212 -  -7.2  -2.71537   ACACTCAAGCAGAAG         CAGCTCAACCTG ATC CAAGATGGGCTG         ACGAGTTAGAAAAGC  56 72
    AM1_5140 5202432 .. 5202447 -  -3.3  -3.08327   ATCAAACCCCCAAGA              GTATG CTCACC CATAC               GCAAGCATCAACGTT  46 87
    AM1_5139 NONE
    AM1_5137 5200148 .. 5200164 -  -6.5  -3.01924   CATCTCTCTCGAATA              TCGCTCA GTA TGCGCGA              GTGAGCGATTCAGCC  55 445
    AM1_5136 5198480 .. 5198494 -  -2.8  -2.72379   CCAACTCGTCAAGGA               CTATCA GTT TGAAAG               ACTGATTCACTTAAC  41 110
    AM1_5134 5191933 .. 5191977 - -14.7  -2.57192   AGTCAATGCAATCCA TCTAAATACTTTAGTCAATCC TTC AAATAGACTAAAGTATTTAGA AATTGGCCAGATATA 100 83
    AM1_5132 5190894 .. 5190909 -  -4.8  -2.94888   AACCGAGTGAAACGA              TTAATC AATG GATTAA               TTACTGGTGGGAAGA  49 236
    AM1_5130 5189118 .. 5189150 -  -2.5  -3.81848   AATATGGGACAAGAA      CGGGACTGACGGGAT TCG AACCCGCAACTTCCG      CCGTGACAGGGCGGT  52 160
        gltX 5187284 .. 5187296 -  -9.1  -3.84246   TGCTCAATCAGCAAA                CTGGC CAG GCCAG                ATCCTAGCTGCAATG  76 285
    AM1_5125 5185252 .. 5185262 -  -5.4  -3.15324   TATGTTGAGCAAAAG                 CTTG CCT CAAG                 ATCCGGTCTTCTGCA  53 21
    AM1_5120 5179750 .. 5179762 -  -2.7  -3.00574   GTAGAGAAAACAGCA                GAAAC AGA ATTTC                ATAAACAGCAACTTC  43 333
    AM1_5118 5177279 .. 5177291 -  -3.4  -3.34344   TGAGTTTCTAACCAA                CCAT CAATC ATGG                GGTAAAAACTCTTTG  47 16
    AM1_5111 5174452 .. 5174462 -  -3.2  -3.59627   ACTAAATTTTTTAAA                 CCGA TTC TCAG                 ATGTTGTTAGCGCTG  51 367
    AM1_5102 5156363 .. 5156375 -  -7.7  -2.91582   GAGGTGATTGAGATA                CAGTC GGG GACTG                CCTATAGCCTGACTG  59 140
    AM1_5100 5153806 .. 5153817 -  -2.2  -3.53012   GGGTTGCCTCCCAAA                TCGA TGTA CCGA                 CGGCAGTGATCTTAG  47 291
    AM1_5097 5151377 .. 5151402 -  -3.9  -3.93256   GATAGCTCCAAACAA         CCCGAGTACAT TCAT ACGGACTGGGG          GATTGGCTATTTTTT  57 234
    AM1_5092 5145613 .. 5145625 -  -4.1  -3.89614   CTGAAGGCTCACAAA                GAAGA TGG CCTTC                GATATAAGTTAGCTT  57 400
    AM1_5090 5144329 .. 5144339 -  -6.8  -2.78018   AGTCTTTATTAATCA                 GGAC TGA GTCC                 TTTGGCTTTCAGCCA  57 8
    AM1_5089 5143107 .. 5143131 -  -2.7   -4.1552   TACTGGCTGAATAAA          CCTGCTTCCCT CAA AGGGTACGAGG          TGATTTAGGCGGTTG  57 171
    AM1_5088 5140631 .. 5140650 -  -3.6  -4.45664   TTAATCTAAGCAAAA            TACCAATA GCCC TAATGGTA             CTGAGCAATGGAATA  65 123
    AM1_5087 5140108 .. 5140118 -  -8.2  -3.61178   GCCATGCATGGTAAA                 GGCC CTT GGCC                 CTTGGTGATTGCCTG  69 127
    AM1_5081 5134635 .. 5134646 -  -2.2  -2.69457   GAGAAAAAAACAATC                CCAG TATT CTAG                 TGCCGCGATAAAAAA  40 319
    AM1_5080 NONE
        cheW 5132047 .. 5132063 -    -5  -3.26319   AAGGTTTGATACGAA              GTCCGC AAATA GCGGTC              ATAAAAAGATTGATC  53 70
    AM1_5078 5130579 .. 5130605 -  -4.5  -3.93057   GGGAAAAGCAGGAAA        GAGCTTTCG-CT TTGG AGTCGAAAGATC         CCAGACAATCAAGGG  61 66
    AM1_5077 NONE
    AM1_5076 5127365 .. 5127378 -  -4.5   -5.0538   GCTTATGGCAAAAAA               CTGCC CAAT GGCAA                AACTTATAAACAGCA  80 435
    AM1_5070 5122359 .. 5122373 -  -3.5  -2.81464   GCAGGAGGCAGGAGA               GGACG AAGTA CATCC               CACTCCGTATCACTC  45 176
    AM1_5069 5122009 .. 5122035 -  -5.2  -2.57244   TCAGTGACCAAGTTA         TCTATTGTCAAT AAT ATTGACTATTGA         ATGAAATACTCCTGA  49 91
    AM1_5066 5115299 .. 5115322 - -13.8  -3.64822   AGTTGTTGAGGTAAA          GGCGGCAGGC TTGA GTCTGCCGCC           GAAGTTTCTTTATCT 100 39
    AM1_5065 5113436 .. 5113462 -  -5.9  -3.35073   ACTATTCCCAATTAA        CCGCCTGTTGAA GGTT TGCAACA-GCGG         AGACCTCATATCATG  57 406
    AM1_5063 5108804 .. 5108818 -  -4.3  -3.67564   AATCACCTACTCAAA               GATGA AATTG TCATC               CCTGAGTGTTGTCAG  54 2
    AM1_5062 5106488 .. 5106505 -  -4.1  -3.86194   AAGGCCTTTGACAAA             GCGGATA TCAA TATCCCC              TATCCTATTCGGACG  57 500
    AM1_5054 NONE
    AM1_5053 5099539 .. 5099553 -  -2.1  -3.81689   AAGAGGAGCAGGAAA              CGG-AC TAGG GTGCCG               TTAAAGATAGGTCGT  51 15
    AM1_5052 NONE
    AM1_5051 5097116 .. 5097162 -   -11  -4.75289   TACTAGAAGATAAAA TAGTGTATTGCGTGCCATCC AAGAAAA GGATGGCACGCAATAAGATA GAAACAAAAAGATGA 100 158
    AM1_6412 5095667 .. 5095679 -  -3.4  -3.57561   TGCCAAGCGGCTAAA                CAAC AGGGG GTTG                AGGCAACCTTTGAAG  50 370
    AM1_5048 5093790 .. 5093826 - -10.1  -4.41616   ACTCGCTCAAACAAA    TCCCCAGGTAGATCTTT TAT AATGACCTGCCTGGGGT    TTTTTAGCTGGGCTA 100 110
    AM1_5045 5092004 .. 5092016 -  -7.7  -5.08255   ATGTTCAAAAGAAAA                TGCTG CAA CAGCA                TCTGGGTGACTTTAC  90 101
    AM1_5044 5090981 .. 5090994 -  -2.3  -3.69434   GGAATGAATCTCAAA               CGACC ATCT GGTAG                TCAGTCTGCTATTTT  49 455
    AM1_5042 5090335 .. 5090360 -  -3.1   -2.5934   TCCCAAAGTAGGAAC         TGGGGGGGTGA CCGT TCTCCCCCTAA          AGATGGAGACAAGAC  42 22
    AM1_5041 NONE
    AM1_5040 5089205 .. 5089240 - -22.8  -3.30903   AAAAGCTGTGTATAA    CCCTACGGTCCAAACT AATT AGCTTGGACCGTAGGG     TTGATGGCTTACGGA 100 89
    AM1_5035 5082659 .. 5082682 -    -3  -2.67515   TGCAGCATTACATTA          TGCTGAGCCG CAAT CTGCTCTACA           CAGGTTTGACGAGGG  41 284
    AM1_5030 5077743 .. 5077759 -  -2.3  -3.14647   ATGTACTATAGCCAA              TGAAAAT TAA ATTGTCA              TCAGTGAAAAAGCAG  43 58
    AM1_5029 NONE
    AM1_5028 5072159 .. 5072170 -    -3  -3.48505   GGCCAAAAACCAAGA                TCAA GCGA TTGA                 GCTAGTGGGGCTAGA  49 202
         ldh NONE
    AM1_5025 5069021 .. 5069039 -  -3.8   -4.9138   AGTAGTCAAATAAAA             TAGCCATA AAT CATGGCTT             CACTCGTTTCTGGAT  73 171
    AM1_5019 5062826 .. 5062837 -  -3.6  -3.84648   TTCAATATCAGGAAA                CCCG GAAA CGAG                 CTGAATCGGCAAGAG  55 141
    AM1_5017 5061719 .. 5061749 -  -2.6  -3.24747   GGTGGAGATTATTAA       CCGGAGATTG CTAGAGGCATT CAATCTTCGG       AGTCCCACCCCAGTC  46 48
         udp 5058285 .. 5058296 -  -4.4  -3.87994   ATGTACTGCGACAAA                TTCC TCGG GGAA                 TTCATGATTGGCATC  57 334
    AM1_5008 NONE
    AM1_5005 5053313 .. 5053339 - -11.6  -4.99638   ATAGGGATATAAAAA         GGCTAGGTAGCC TGA GACTACCTAGCA         TCCAGAGACACAGGC 100 64
    AM1_5004 NONE
         rbn NONE
    AM1_5002 NONE
    AM1_5001 5047912 .. 5047933 -  -4.4  -3.92542   GCGACTTGTAAACAA           GCTGTGGT TAATCG ACAACAGC            AACTCCCAGCCCGAT  57 75
    AM1_4995 5044420 .. 5044438 -  -6.8  -2.90992   AATTGGGGGAAATTA             TATCGTCA CTC TGACAATA             TCACTTCAGCTTTAT  58 78
    AM1_4994 5042849 .. 5042863 -  -7.8  -4.81359   AACCCAAAGATAAAA               CGGCCA TCC TGGCCA               TTGCTAAAGCCATTG  85 462
    AM1_4987 5033509 .. 5033525 -  -6.5  -3.64703   TTTCTTCTAGCTAAA              CAGCCCA GAT TGGGGTG              ATTTGAGCCCATTTA  63 73
    AM1_4985 NONE
        fliA 5030995 .. 5031023 - -20.5  -4.87892   GGGGAACAAAAGAAA        TTCCCTGTAGGCT TTA AGCCTACAGGGAA        GATGCATGTCCTATG 100 57
    AM1_4983 NONE
    AM1_4982 NONE
    AM1_4981 5026200 .. 5026218 -  -3.1   -2.5664   GATGGAACGATTAAC             TTTCGGC TCCTT GACGAAA             TGGAATAGATTGATA  42 2
    AM1_4980 5024176 .. 5024197 -  -2.1  -4.61633   ATATATGGCTAAAAA           GCGAGGTCG CAAT CGCACTCAC            ACTATGGAACTGATT  63 90
    AM1_4975 5018748 .. 5018773 -  -9.7  -3.46102   GATTTAAAAACCGAA         GCAGGGGCCTA GTTC TAGACCCCTGT          CTTATTTCAAGCTAG  78 69
    AM1_4973 5015739 .. 5015753 -  -3.5  -3.28988   TACAACAAAGAGACA               GTGAG GTACG CCCAC               TCTAGCACAAGCATC  49 84
    AM1_4972 5014340 .. 5014368 -  -4.5  -2.89564   TTCCCATGGGAGAGA        TTCAGTACCTCCC ATA GGGGGATAACGAA        AGATTGCCCGCAATA  49 44
    AM1_4963 4998972 .. 4998991 -  -2.1  -4.27316   CTGTTTAAGTTAAAA            GAACAGA TTACTG TCTGTGC             TGATGAGGCTCAAAC  57 484
    AM1_4960 4997334 .. 4997352 -  -3.9  -2.77899   CTGCTCTAGCAACCA             TGACACT ATCCG AGTATCA             TCCCATCCAAGCAGG  45 77
    AM1_4959 4996794 .. 4996820 -  -5.8  -3.33696   CTCTTCTGCAATGAA         GCTATCACCCCA TCA CGGGATACTAGC         CAACTCTCTTTATCC  57 401
    AM1_4958 4996479 .. 4996491 -  -4.8  -3.34501   AGATAAGGTGTATAA                TCGC TCAAC GCGA                AAAGGTGATTAGCTG  53 34
    AM1_4956 NONE
    AM1_4955 NONE
    AM1_4954 4991585 .. 4991598 -  -2.3   -4.7173   GATGATATTGAAAAA               GCCAA GGTA CCGGC                TATTTTTGCGGAAAC  67 284
    AM1_4952 NONE
    AM1_4951 NONE
        ispH 4987411 .. 4987428 -  -5.5  -4.40132   AGCAATTAGAACAAA             CAGCAGC TCCT GCTCCTG              GTGCAGATACCAACA  69 239
    AM1_4946 NONE
    AM1_4945 4982736 .. 4982757 -  -3.7  -3.53012   TTGTTTCTGGTGAAA           CTAGTCGAT AAAT ATCAGCTAG            AACAGCAATCGATCA  51 96
    AM1_4943 NONE
    AM1_4942 4979896 .. 4979909 -  -2.3  -3.53091   AGTCCCTTTCCTAAA               TCAGC CCAA GCGGA                GTCTGGGGAGAATAT  47 7
    AM1_4941 4979413 .. 4979453 -  -2.5  -3.29187   ACCGAAAATACTGAA  GCAATTCAAACCATAATCC AAA GGGCAATGGCTCAATTTGC  AAATGCGGATTATTC  45 100
    AM1_4934 NONE
    AM1_4933 NONE
    AM1_4932 4972599 .. 4972609 -  -5.4  -3.24976   AACTCCCCAAAGAGA                 TTGC AAT GCAA                 GTGATGGGAGAGGTT  52 191
    AM1_4920 4966325 .. 4966340 -  -3.2  -4.07568   TGCTGGCTCTCAAAA              GTTTCC AATT GGATAC               TGTGGGGAACGTGAT  58 353
    AM1_4919 4965436 .. 4965461 -    -9  -2.87354   TCAACCAATCAATGA         GGCTGGGAAG TAGACG CTTTCCAGCC          TTCCTGTTAGATAGC  67 43
    AM1_4914 4960121 .. 4960142 -  -5.7  -3.76048   GCTGAAGGAAGAGAA           GCCCGGCAG CATT CTGCGGGTC            CGACTGATTCAAAAA  61 494
    AM1_4910 4957401 .. 4957413 -  -7.7  -3.21276   TCTTCGTTTACAAGA                GGGTT TAT AACCC                ATCAGGAATTCAAAT  63 43
         sds NONE
        lepB 4955580 .. 4955593 -  -5.2  -3.69618   GTGAATGGGAAAACA               GCGC GTGTAG GCGC                TTTGGTCGCAGTAGA  59 124
        chlI 4954136 .. 4954148 -  -4.1  -4.59109   GAGAGTCGTCAAAAA                CCCAA GCA TTGGA                TTTTCATGGATTTGA  68 406
        exbB NONE
        exbD 4950006 .. 4950024 -  -5.9  -4.02051   GATTAATGCAAATAA             CTGCCCC TATGT GGGTCAG             ACTTTGGGCGTTGCG  66 222
    AM1_4900 4948202 .. 4948225 - -14.6  -4.22554   CGAGCCAACAAATAA          TCGCGGCAGG TCAT CCTACCGCGA           TCGTGGACCGAATTA 100 215
    AM1_4895 NONE
    AM1_4894 NONE
    AM1_4893 4942190 .. 4942203 -  -5.3  -4.11216   CCCGTACCTGGAAAA               TCATG AGGA CATGA                TTTACGAAGCTAGAG  65 27
       psb29 4939982 .. 4939996 -  -2.8  -2.69647   AAGGCTGACAGATGA               GGTCAT GGC ATGACT               CCTTTACACAGCAAA  41 41
    AM1_4890 4938995 .. 4939005 -    -4  -2.72166   TCTTTAACCAAAGAT                 TTTG CGT CAAA                 GTGAAAAAGCTATCG  45 45
         eda NONE
    AM1_4888 NONE
    AM1_4887 4936467 .. 4936491 -  -7.2  -4.18197   ATTTGCGATTCAAAA          CACCCCAATG TTTGC CATTGAAGTG          ATGCGAAGTTACTCC  73 103
    AM1_4882 4931916 .. 4931929 -  -3.1  -3.63627   GTGCGATAGCGCAAA               GACTG GATT CAATC                TTGCTCTGTGGCGGA  51 139
    AM1_4881 4931593 .. 4931603 -  -5.4   -3.0701   AGAATTCTCAGGTAA                 GGAT TGC ATCC                 ATCTCTCGCACTCAA  52 138
    AM1_4880 4930876 .. 4930886 -  -2.4  -4.82901   GCCTTTCTACAAAAA                 CACC TGC GGAG                 CTGTTCTGCTCTTTT  66 249
    AM1_4878 4929857 .. 4929867 -  -5.4  -2.60075   TCGCGTTCAAGGAAG                 TGGA TGG TCCA                 GCCCTGGGACTGGCT  49 97
    AM1_4876 4929101 .. 4929119 -  -2.4  -4.28762   ACAACGCCAGGAAAA             GCATATTC TGA AAAAATGC             AAGAGATTTGGGAGC  57 162
    AM1_4873 4925995 .. 4926018 -  -9.6  -4.52042   ATAAAAACGAAGAAA          TCCCCTGCAA AAAA TCACAGGGGA           AGTAAGGCTTTTGTA  95 307
        glmU NONE
    AM1_4867 4918393 .. 4918407 -  -4.3  -3.63515   TCCCACTTGGAATAA               TGACT GAAAT AGTCA               GTGATTAGACAATAT  54 203
    AM1_4866 4916854 .. 4916874 -  -2.5  -4.42594   TAAAGGAAATACAAA            CCCTGTT GTAGTCG AGCAGGG            AAATAGGGCTAAATC  61 44
    AM1_4865 NONE
    AM1_4864 NONE
    AM1_4863 4909432 .. 4909468 - -10.6  -3.55447   CCACTTATCATAGAA   GATGCATTATTTTTGTA TAAT TA-AAAAATAATGCATC    TTTGAGAAGAAAAGT  80 83
    AM1_4862 4907975 .. 4908006 -  -2.6  -5.33405   TTTAGTAAATAAAAA      TTCTATAAAATAAAA ACC TTTTATTTTAT-GTA      TTCCTCTAATCCTAA  76 266
    AM1_4861 4904595 .. 4904605 -  -6.8  -3.27215   AAAGGTTTAGAGCAA                 GCTG ATC CAGC                 CCTTCTCAAAACAGC  59 348
    AM1_4859 NONE
    AM1_4857 4900989 .. 4901008 -   -10   -2.6563   TTGGTGAAGAAGGCA            CGGTCCTC AGCC GAGAACCG             GGGGATTACTGGAGC  66 106
        folD 4899804 .. 4899818 -  -4.2  -3.54424   CTCCAGCTGTTGAAA               GCAGTG ATT CAGTGC               GATCTCAACCATGAG  52 47
    AM1_4854 NONE
    AM1_4853 4898284 .. 4898294 -  -4.6  -3.02023   TTTAGAGAAGTAAAC                 CAGC CGG GCCG                 AGCAGTATGGCAATG  50 1
        chlH 4894283 .. 4894313 -  -8.9   -2.7386   AATCCATTTCAACGA       CCGCGAAGAGGCC CAAAC AGCCCCTCCGCGC       TATGGATACTAGAAC  67 40
    AM1_4851 4893868 .. 4893880 -  -3.5  -2.95448   ATGAATAGCCATATA                TAAAA AAT TTTTA                ATCAATAGTTTACAT  46 234
    AM1_4850 4892412 .. 4892427 -    -4  -4.68506   AAGCAAGTTGAAAAA              CATCGT TGGG ACAATG               TCACCGTTGCCACTC  71 308
    AM1_4847 4888520 .. 4888548 -  -4.5  -4.07687   ACCCTCGCCTTAAAA        CCCAAGACAGATT ATC AATGGGTCGTGGG        ACTCTTCTGTACCCG  62 384
         shc 4885588 .. 4885601 -  -3.1  -5.80248   TAAGACACAAAAAAA               CTCAG TACA CTGAA                TATCCGATAGACCAC  90 140
    AM1_4842 4882011 .. 4882025 -  -2.8  -2.90392   CAGTCCCCAAGGATA               GGGA GTTCTGT TCCC               TTAAAGGGTAGTCTA  43 151
    AM1_4841 4881334 .. 4881366 -  -6.1  -2.57683   ATACTTTCCTAGAAC      GTCTCGTGGTTTCCC GTT GGGGCACTACGAGGC      TTTTTTGATCGGTGA  54 98
    AM1_4838 4878978 .. 4878990 -  -9.1  -2.88832   CAACCCCAGAAGAAC                TCCCG TTG CGGGA                TTTGCAAGATCAAGT  65 401
    AM1_4836 4872852 .. 4872886 -  -9.4  -3.10028   AGCAAGACTTCAACA     GCATGTTCATTTGCTT GGC AAGCGAATAGACATGC     CAAATATTTTCGCAG  67 463
    AM1_4830 NONE
    AM1_4829 4865304 .. 4865324 -  -2.6  -3.12595   CCCAACGAGCCAATA           CTGCGATGA ACTC CCAT-GCAG            GCACGGTCAACGAAA  45 92
        crtP NONE
         psy 4860933 .. 4860944 -  -2.2  -3.87576   TCATAACAAGGCAAA                CCGT AGCA ACAG                 CCGCTCTTCGTTGGA  51 107
    AM1_4824 4860046 .. 4860057 -    -3  -4.11484   CTTAATGTCCGAAAA                TTAG CCCA CTAA                 TGCAGGTTCCCCCAT  58 14
        cutA NONE
    AM1_4820 4854853 .. 4854870 -  -3.3  -3.16564   CGCCTACTCTATTAA             CCGGCTG TTCT CAGACAG              ATGTATCCCTGTCTA  46 160
    AM1_4816 4852197 .. 4852207 -  -5.4  -3.20382   TGTCACAGGCATCAA                 GCTA GGC TAGC                 GTCTCATTAAACTTG  53 151
    AM1_4814 4850797 .. 4850809 -  -4.8  -2.77013   GATGGGTCTAATAAT                CCCT GGCAA AGGG                TTTCCACATCCCATT  49 122
        rpmG NONE
        rpsR 4848964 .. 4848983 -  -3.5  -3.27774   TATGGCAAGTACGAA            CTAGCCC ACAGCA GGGGTAG             TTCTATCAGTCGATA  49 49
    AM1_4810 4846664 .. 4846684 -  -7.6  -4.72272   GCTGCGGATCAAAAA           GCGA-TCGC ACTC GCGACTCGC            TTTGGCTATACTCTC  85 220
    AM1_4809 4845620 .. 4845645 -  -5.5  -2.87931   GCCATCGTGCATAGA         CTTGAGCAAGCC GTT GACT-ACTCAAG         AATTCAATGCCAGCC  50 56
        trpB NONE
    AM1_4804 4841622 .. 4841657 - -16.4  -2.52543   ACTTCGTTGAACTTA    GAAAGCTGGCCTTT TCTTGTAT AAAGGCCAGCTTTC     TGCTTTTAGCAAGGG 100 45
    AM1_4802 4838433 .. 4838450 -  -4.1  -3.16564   TTTGTATTGGATCAA             TTTGAGG CGAC CCTCAAT              CAAGAGGACATTACC  48 286
    AM1_4797 4835380 .. 4835393 -  -2.5  -4.20834   CTGAAAATAATCAAA               TTTAA GAAC TTAAA                GCATGCGTGTAATCA  57 145
    AM1_4796 NONE
    AM1_4795 4832874 .. 4832889 -  -2.5  -3.36398   ATCTACACATAAAAC              GACGG GCTTAA CCATC               ACATTGATCCATTGC  46 67
    AM1_4794 NONE
    AM1_4793 NONE
    AM1_4791 4828159 .. 4828171 -  -3.4  -3.18023   CTACGACGATCAACA                TTGG GGTGG CCAA                CCAGTATCGTTTGCT  46 153
    AM1_4788 4823728 .. 4823751 -  -2.4  -4.68908   TCTATGGAAAAGAAA          CGACACTTAGC TAC GCAAAG-ATCG          ATATTACGTAGCACA  63 519
    AM1_4786 NONE
    AM1_4785 NONE
    AM1_4783 NONE
    AM1_4782 NONE
    AM1_4781 NONE
    AM1_4780 NONE
    AM1_4779 NONE
    AM1_4778 NONE
    AM1_4777 NONE
    AM1_4776 4815821 .. 4815832 -  -2.2  -4.41817   GAAAAGAACTCAAAA                GCAG ACAA CTAC                 AGGGACTGGAAAGTA  60 151
    AM1_4775 4815200 .. 4815223 -  -6.7  -3.08201   CAACACCCTCAAAAG          GACGTTGCG ACGGAA CTCAACGTC           ATGCTCTGCAATCAT  59 480
    AM1_4772 4812901 .. 4812928 -  -2.8  -2.78996   GAGCCGTAGGCAAAG        TAATAGTC-CGGA TGA TTCGTGACCATTA        TTTTGGCGATTTCAT  42 23
    AM1_4771 4812214 .. 4812248 -  -4.4  -3.72051   GCTAAGAATCCTAAA    CTGACCAT-GGCGCTG ATATA CAG-GCCAATGGCCAA    ACTAGTCTTAGAGCA  54 197
    AM1_4770 4812096 .. 4812112 -  -3.6  -3.18582   TATTGCATCGACTAA              TGCCTC AATCG GCGGCA              ATTGTCTAAACCCCG  48 48
    AM1_4765 4806771 .. 4806788 -  -4.9  -4.09864   AGTTAGGGCCTAAAA             TCTCCAA AAAA TTAGAGA              AAGCGGTTCTGGAAT  62 455
    AM1_4763 4803990 .. 4804004 -  -2.8   -3.1676   ATACAGGCATCAAGA               TGACAA AGT TAGTCA               AATTCTAAGGGTAGA  44 89
    AM1_4762 4803548 .. 4803560 -  -3.3  -4.11692   TAGTTATTTTTAAAA                GGCTG GCT CAGGC                TCTGCTTCTGGTGGT  58 7
        purK NONE
    AM1_4760 4801207 .. 4801218 -  -3.6  -4.65895   GTCTCGATTCAAAAA                GGCC AGTC AGCC                 GTGGTGATGCTGTCT  66 213
        fliA 4798687 .. 4798697 -  -6.8  -3.76952   CTTAGTTAAGGTAAA                 TGGC TCA GCCA                 TTTAGAGCTACCGAA  67 46
    AM1_4756 4797927 .. 4797940 -  -5.3  -4.70659   TGCCAGACTTAAAAA               GTGAT ATAA ATCAC                ATTCGATTATCTTCA  73 141
    AM1_4754 4794558 .. 4794570 -  -5.5  -2.74269   CTTAGAGGAGACAAT                GGCCA TAA TAGCC                TCCATCATAGCGGCC  50 77
        ruvB NONE
    AM1_4752 4792674 .. 4792696 -  -3.5  -3.58536   AAATTCAGCGCTAAA          CCAGC-TATC TAGA AATAGGCTGG           CCGCGCTCAGAGGCT  53 7
    AM1_4751 4791983 .. 4791997 -  -5.6  -2.76671   ACTATCCAAAACCCA               TGGGGC GAT GCCACA               GATACACAGCCACCC  53 163
    AM1_4750 NONE
    AM1_4749 NONE
    AM1_4748 4785459 .. 4785489 - -11.2  -3.21276   TCCTCCGGGACAACA       GCGGCGACATCC TCTGGAT GAATGTCACCGC       GGCCTGCCAAGACTC  76 220
    AM1_4745 4781732 .. 4781743 -  -4.4  -3.89354   TCTCCAAACCAAGAA                CAGA CGAC TCTG                 CATGAGAATGATATT  57 89
    AM1_4740 NONE
    AM1_4735 4771379 .. 4771395 - -12.3  -2.84126   TCATAAATCTCAAAG              TCCCCCA GAA TGGGGGA              TTTAGGGGGCGGATG  89 109
    AM1_4734 NONE
    AM1_4733 NONE
    AM1_4732 4764355 .. 4764369 -  -5.7  -2.78816   CGATCTGGGACGATA               CCAAC CATTC GTTGG               TTATCCAAGAAAGGG  53 171
    AM1_4730 NONE
    AM1_4729 NONE
    AM1_4728 4761188 .. 4761202 -  -2.8  -3.81488   CCCGCCCAAACAGAA               GATAAC GGT GCCATC               GTCGTCAACTTAGGT  54 253
    AM1_4719 4743497 .. 4743508 -  -4.4  -3.25538   CGGTCAATAAAAGCA                TGGA GCGC TCCA                 AACTGTAACAAAAGC  51 479
    AM1_4688 4721396 .. 4721408 -  -7.7  -3.53012   GCGGTGGTTTGCAAA                GGTCT CTT AGACC                TAGCTAGTTCGATCT  68 44
    AM1_4685 4715962 .. 4715996 -  -6.6  -3.85698   GCCTTCTTCCACAAA    TC-GCATACGCAC CCGCTCAATT GTGCGTATGCTGA     CACCTATCGCTTCAT  67 455
    AM1_4677 4710031 .. 4710048 -    -2  -3.65314   GCTAATGGTGAATAA             CCATCT TTCTAT AGATGA              TTTGAAACGTTTTGG  49 458
        proB NONE
    AM1_4674 4707359 .. 4707376 -  -2.7  -3.88766   ATCCCAGAGACGAAA             GCCTT TTATCAGC AAGGC              TTAGGCTGTGAGCTA  54 379
    AM1_4673 NONE
    AM1_4671 4705549 .. 4705562 -  -6.7  -4.16943   CCCGATATGGCAAAA               CCGAT ATAG ATCGG                ATTCAACGTCTGCTG  71 319
        rnhA 4704256 .. 4704270 -  -3.5   -2.5602   GAATTACTTAACCTA               TGCCG AAAAA CGACA               GCAGTTGGTAGAAGA  42 173
        petB 4700258 .. 4700274 -  -2.3  -3.86015   GAGGGTTCTCACAAA              GACTT ACGTCAA AAGTC              TGAGACTCCGAAAAC  51 71
        petD 4699639 .. 4699671 - -12.2  -5.20333   GACCTAGAACAAAAA     GAGCACCCA-TTGCT CATT AGCAAATGGATGCTC      AGAAAATTAATACCC 100 71
    AM1_4664 4698737 .. 4698783 - -21.3  -3.55761   CATTTATCCTGCAAA TA-GTAATAGCCGGGTGTATTG AATT CAACACACCCGGCTATTACCTA AGAAGGTCAAGGGAA 100 84
         def 4697980 .. 4698003 -  -6.8  -4.21812   GTTCACCTAAAATAA          CGACTCTGATG GTG CACCAGA-TCG          CGAAGGCTGAGACCA  71 67
    AM1_4662 NONE
    AM1_4661 4696323 .. 4696337 -  -6.4  -3.68341   AACCGCATCGAAGAA               GTCCTC GTC GAAGAC               CAAAATCCCAAAGAT  63 236
    AM1_4659 NONE
        aroK 4692956 .. 4692972 -  -2.1  -4.44974   CCAAACCCGAGAAAA              GGCTCAG TTA CTGCGAC              AAACCCGGAACGAGT  61 242
    AM1_4653 4688733 .. 4688751 -  -4.5  -3.90744   GTTTTGGTCAAACAA             TTGACCC AAAAA GGGGCAA             CAGTGGTGGAGGTGG  59 345
    AM1_4652 4686448 .. 4686460 -  -6.3  -3.74077   GGCTAGATATGTAAA                TCATC GAA GATGA                TTGATCCGGCTCTAC  65 112
    AM1_4651 NONE
        dppB 4683637 .. 4683647 -  -8.2  -3.07816   CTTCTATTTAGTCAA                 GGGG GAA CCCC                 AACAGAGGGATTACC  67 58
    AM1_4649 4682411 .. 4682453 - -13.5   -2.9155   GTCCCCAATAGCACA GAG-CGCTTCGCCCAGCTCA TTCT TGAGCAGATCGAAGCGTCTC CATGAAATAAATAGG 100 66
    AM1_4647 NONE
        minC NONE
        minD NONE
        minE 4678060 .. 4678073 -  -2.4  -4.06562   AACTTCAATTACAAA               GACA AGTCGA TGTC                GGGCTTAGGGGGCGA  53 5
    AM1_4642 4676354 .. 4676377 -  -4.8  -3.14878   GGCCCCAATTGAATA          GATAGAAACAT ACA AT-TTTCTATC          TTGATGCATGAGTGG  51 21
    AM1_4640 4674596 .. 4674618 -  -2.6  -2.91276   TCCGCCCTCACAAAT           GGCCATGAAC GCG GTCTATGGCA           TCGTGTATATCACCT  42 84
        queA 4670537 .. 4670557 -    -4  -3.33744   TCTTGGGCCAAAAAG           GTCGCCAGC GCGT GCTGG-AAC            GATATTGCCTAGATC  50 122
    AM1_4631 NONE
        petH 4663397 .. 4663419 - -12.1   -5.5943   AAATGATCAAAAAAA           CTCCAGTTC ATTGA GAACTGGAG           TGCTTCAGAGAGTTA 100 77
    AM1_4629 4662486 .. 4662503 -  -3.3  -4.14859   ATGAAGAATCATAAA             TCCCGCC TATT GTCAGGA              AATCAGTAGTTTCTC  58 419
    AM1_4627 4660507 .. 4660518 -  -2.2  -3.88985   AAAAGCCTGGAGAAA                CCGT TGGC ACAG                 CCCGTACCGGTATCG  51 237
    AM1_4626 4659824 .. 4659846 -    -7  -2.64416   GATTTTTATCACAAC           CTTGAGCTTG ATC CAAACTCTAG           CCATTATGGTTCTGA  56 468
        coxB 4654486 .. 4654498 -  -5.5  -3.93868   TTGTCAAAATAAATA                GCCCT GTC AGGAC                GCTGAAGGGGAGTGG  63 19
        ctaD NONE
        ctaE NONE
        nadC 4651013 .. 4651028 -  -4.6   -3.1875   GATATTCTAAGTTAA              CCGCAA AACG TAGCGG               GTCGCACTGTTTGTT  51 216
    AM1_4617 4649929 .. 4649941 -  -4.1  -3.83026   GGCGGGTACAGTAAA                TCTCC ATT GAAGA                GTTGCAGCTACTCGC  57 46
    AM1_4616 NONE
    AM1_4615 NONE
    AM1_4614 4646732 .. 4646743 -  -2.2  -3.12395   CTTACTACCTAAAAG                GAGA AAAT CCTC                 TGTAGATATCAATAC  43 84
    AM1_4613 4645792 .. 4645812 -  -4.7  -3.24245   GGACTTACAAGGCAA            CCTCCAAAT GGA ATTTGATGG            TCACGCTACAGTCAT  50 252
    AM1_4610 4640329 .. 4640363 - -12.3  -5.14965   ATGCCGATGAAAAAA     CGCTCAGTGGTTAGA GGAAA TCTAACTACTGAGCA     ATATTTACACGGGTT 100 76
    AM1_4609 4639673 .. 4639687 -  -2.8  -3.04715   TATCGTTCTGAAAAT               GGTG TTTGGCT CACC               GATCATGTGCCTGCT  43 422
    AM1_4606 4637761 .. 4637779 -  -7.4  -2.63596   CTTGACTCTAGAGCA             GATTGCAC CAG GTGCAGTC             ATTAACAATTAGCAG  58 58
    AM1_4596 NONE
    AM1_4595 4629821 .. 4629831 -  -5.4   -2.9127   TAGAACCAAACATTA                 GGTT CAC AACC                 GGAGAAATTCGCCCA  52 55
    AM1_4594 NONE
    AM1_4593 4628905 .. 4628933 -  -3.2  -4.68424   CAACTCATTGAAAAA       GCAGGTTTTGTCA GAAT CGA-ATAACCTGC        CGGGCCTTGAGCAAC  65 49
    AM1_4591 4624291 .. 4624341 - -15.6  -3.53224   TAGCCCTGGTTGAAA TCCCTAAGCAAAAGCCCTCCAC TGAAAAT GTGGAGGGCTTTTGCTTTAGAT GGATTATTAGCGGTT 100 32
    AM1_4587 4621218 .. 4621233 -  -6.2  -3.04322   GGGAAGCCTTTAAGA              TTTTGC GATC GCAAAA               AGTGATGCTGCAAGA  53 95
    AM1_4577 NONE
    AM1_4576 NONE
    AM1_4575 NONE
    AM1_4574 4611190 .. 4611215 -  -6.9  -5.10933   TCACCCAAAATAAAA         TCAGCCAGACA GTAC TATCCGGCTAA          AAGAGGCATATATAG  88 380
    AM1_4573 4610847 .. 4610901 - -17.5  -4.71482   AGCAAAGCTTAAAAA GGCTGCAAAATTCATGCTGGAATAT GAGTT ATACCCCAGCATGAATTTTGCAGGT TACTAACTCTGCCCT 100 175
    AM1_4572 4608861 .. 4608889 -  -3.9  -3.35962   TTCACATAAAAATCA        TTTCGATAAGTCT TAA AGATCTAACGAAA        AAATAAAAAAACAGA  49 314
    AM1_4571 NONE
    AM1_4570 4605250 .. 4605260 -  -2.4  -3.55622   CGTAATTTGGCGAAA                 TCCG TGA CGGT                 TGAGTAGACCCAAAC  47 42
    AM1_4567 NONE
    AM1_4566 4600782 .. 4600796 -  -3.4  -2.52543   ATTCTTCTCAATTTA               TGCGCC GGA AGCGCT               GCTAGATACGTCAAC  42 454
    AM1_4563 NONE
    AM1_4561 4595438 .. 4595456 -  -8.2   -4.9792   GATGGGATAGAAAAA             CTTGAAGA CAA TCCTCAAG             CTTTTGGGAACTTCG 100 354
         ppc 4592272 .. 4592288 - -10.9  -2.62616   TCAGTTGGTAGAGCA              CCTGCAT GGC ATGCAGG              GGGTCAGCGGTTCGA  76 94
    AM1_4558 4591823 .. 4591840 -  -8.5  -3.10715   CGGAGGACTATTTAA             TCAATCC AGAC GGATTGA              TAGTAAGGGTCGCCA  67 4
    AM1_4557 4591260 .. 4591273 -  -2.4  -4.87786   CTAATTCCAGAAAAA               CGAT TGTAAG ATCG                ATGTTCCCAATCTGT  66 49
        nrdR NONE
        rpsA 4589455 .. 4589467 -  -3.4  -2.64872   TCGAGTGAAGAACAG                TCCT TATGC AGGA                GAGGTGACTTCTTCG  42 16
        pdxA 4588084 .. 4588094 -    -4  -3.06261   CGTTAATCGCTAACA                 CATT TCC AATG                 CTGGATTTCCCAAAC  47 286
    AM1_4552 NONE
    AM1_4551 NONE
    AM1_4548 4584278 .. 4584290 -  -6.3  -3.56704   CTTTTATCAAACCAA                CAGAA AAT TTCTG                GGTTTGTCTGGGAGG  61 344
    AM1_4546 4581924 .. 4581938 -  -2.8   -3.2327   CGAACCTACGACCAA               TCGATT AAC AGTCGA               CCGCTCTACCACTGA  44 107
    AM1_4544 NONE
    AM1_4542 4576845 .. 4576858 -  -6.7  -3.25918   CAATCTTCAAAGACA               TTCCC GATC GGGAA                GGGGACTTGAAATTT  57 369
        petN 4575150 .. 4575164 -  -2.8   -4.1673   GAATCGGTTAACAAA               GGCA AATTACA TGCC               GTGGCGGCCCCATAC  59 17
        argS 4572726 .. 4572738 -  -3.5  -3.97947   TTTATTGACGAGAAA                TATAA ATA TTATA                AAAATAATCTTTCTC  58 493
    AM1_4537 NONE
    AM1_4536 4569082 .. 4569097 - -10.4   -2.9059   ACCTATTACAACAAT              GCCCAC GGGA GTGGGC               TGAGGAGACAAACTG  76 141
    AM1_4535 4566460 .. 4566474 -  -5.7  -2.94194   CATAAATTCCAGATA               TCCCT GGTTT AGGGA               TTTAGCTTGTCCTGC  54 296
    AM1_4533 4565838 .. 4565848 -    -4  -3.01924   TAGGTTTTTTGAAGA                 TCTT TTT AAGA                 AGGCAGTCGCTTTAC  47 445
    AM1_4531 4557584 .. 4557594 -  -6.8  -2.91264   TGCCCCATTTACACA                 TCGG CAG CCGA                 GGTCCCCAACCAGAG  54 291
    AM1_4529 4556998 .. 4557015 -  -2.7  -3.21912   GCGTTAAGGTATCAA             TCGGCCAC ATA GTG-CCAA             CCTTCTGGCTCATAT  44 4
    AM1_4528 NONE
    AM1_4527 NONE
    AM1_4526 NONE
    AM1_4525 4550507 .. 4550533 -    -3  -3.82519   AGTAGTGATAAAACA         TGAATGCAGCTC CAA AACCCACATTCA         GGCAGAGTGGCTGCG  53 65
    AM1_4524 NONE
    AM1_4523 4549633 .. 4549650 -  -5.5  -2.99871   GCTGAGATTAAATTA             CCAGGAA CCGA TGCCTGG              AATTTAGGCTGGTTT  51 378
    AM1_4519 4544646 .. 4544658 -  -6.3  -2.59177   ATTGCAGATAGTAAG                GAAAC TCT GTTTC                GGCTCCTGCACTATC  53 450
    AM1_4515 4540882 .. 4540896 -    -5  -3.78087   AACTAAAAGTTGAAA               TTCGCT GGA AGCAAA               ATAGCGATGCCGGAC  57 226
        purU 4535956 .. 4535968 -  -3.3  -4.88407   TGACTCAATCAAAAA                CAACG GTG CGATG                GTTATAGACCAAGAC  68 2
    AM1_4511 NONE
    AM1_4510 4535092 .. 4535108 -  -5.1  -2.95091   ATGGTAATGGACACA              TCCCG ACTCGAA CGGGA              GACCCCCACGATGTC  52 106
    AM1_4508 NONE
    AM1_4507 4534356 .. 4534368 -  -3.3   -2.7682   GGGAATCAGAAACAT                TGAGG TAT CCTCT                TCTGCCCTTAAATGT  43 33
        leuC 4532215 .. 4532227 -  -7.7  -3.45054   GCTCAGAAGTTAGAA                GAGCT TAA AGCTC                AAAGAAAAGCCCAGA  66 238
    AM1_4503 4529640 .. 4529651 -  -2.2  -3.36327   TGATTGTACTGACAA                CCCT TGCG AGAG                 ATCTCTGATCAACAC  45 167
        cdsA NONE
    AM1_4501 4528177 .. 4528202 -  -3.2  -4.67607   GTCTGAAGAAACAAA         CCAGGGTCAA CCCATC CTGACTCCGG          GCTTGATTTTCTCTG  69 470
        miaA NONE
    AM1_4497 4524190 .. 4524204 -    -2  -4.57073   GAGCTGCGGCAAAAA               CGCGCT GAA AGCGTA               GCCAACTTGGAACGT  63 193
    AM1_4495 4522641 .. 4522652 -  -5.8   -4.2757   CGCAAAAAAATAGAA                GCCA TCAT TGGC                 AATGCTCGCGTCTTT  69 518
    AM1_4493 4521276 .. 4521294 -  -3.1  -3.78329   TTTCAGCAAGCGAAA             CTGCCAC TTTCC ATAGCAG             ACCGTTACGCGACTT  51 337
    AM1_4491 4519625 .. 4519635 -  -5.4  -2.98223   TATTGAGATGAGATA                 TCTG GCC CAGA                 CCAATGGTGATCTCA  51 432
    AM1_4487 NONE
    AM1_4486 4513824 .. 4513834 -    -4  -2.76418   TTTTTATACAAAGAT                 CTTT AGT AAAG                 CATTATTCATAGGTT  46 28
    AM1_4485 NONE
    AM1_4484 NONE
    AM1_4483 4512103 .. 4512122 -  -2.1  -4.23615   AGCAGATTTAACAAA            TGCCATC TTTACG GATGCCA             TGCTCACCAGCAGCA  57 271
    AM1_4480 4507880 .. 4507894 -  -2.8  -3.37761   TCTCAATAAATTTAA               GCATAG GTA CCATAC               TTCCAAAGATGATGC  47 191
    AM1_4478 4503661 .. 4503677 -  -3.5  -3.09968   CAGCCAAGGGCAAGA              GCCAGGC TTA GCTGGGC              CGAAGACCGGAGTCC  48 42
    AM1_4477 4502664 .. 4502679 -  -2.4  -3.14132   CGGTTGTCCCATCAA              CTGACC TTAT GGCCTG               TCACGCCATACCTTC  43 16
    AM1_4475 NONE
    AM1_4474 NONE
    AM1_4473 NONE
    AM1_4472 NONE
    AM1_4471 4496985 .. 4497015 -  -9.2  -3.97088   CCCCAGAAGAGGAAA      CCGAACA-GTTCT TGATCG AGAACCTGTTCGG       TTAAAGCCAACGCTT  83 110
    AM1_4463 4491382 .. 4491392 -  -2.4  -2.87983   ACAACCGAAATACGA                 GTCC TAT GGTC                 GAGGTGATAACAAGT  41 47
        ilvA NONE
    AM1_4461 NONE
    AM1_4460 4488425 .. 4488441 -    -8  -5.65177   ATAGCTATAAAAAAA              GCTAGC GATTT GCTAGC              TTCTACAGAATCAGT 100 297
    AM1_4456 NONE
    AM1_4455 4484170 .. 4484180 -  -8.2  -4.78572   CCTCAAGCAAGAAAA                 GGGG CAT CCCC                 CCATCAGCCAACTTG  88 317
        tatC 4482177 .. 4482188 -  -7.2  -2.57069   GCCACGAAACAAAGG                CCCC GGTT GGGG                 AAAGCCGTCAGCATC  56 98
        petC 4481091 .. 4481105 -  -3.5  -2.70979   GTTCAAGGAAACTTA               GACCC ACCAG GGATC               CTTATCTGTACGGAA  44 8
        petA 4480008 .. 4480036 - -13.3   -5.1675   TCACGCACTAAAAAA        GCAGGATTTCC AATGAAA GGAAATCCTGC        TGATTTCAAAGAAAT 100 56
    AM1_4448 4478097 .. 4478121 -  -2.8  -2.62616   CGAGGGGTTAGACTA         TCAGGCG--GGC AAC GCCAGCGCCTGG         GTATTGCTCGGGCCT  41 390
        msrB 4475000 .. 4475024 -  -8.6  -2.73038   TAGAGCTAAATCAAC          TACCCCGC TGCAAAAAG GCGGGGTA          TGGAAGATGTTTCAT  63 323
        alaS 4471326 .. 4471375 -    -8  -2.67423   GTCAACAAGAGCAAT CTCAGGCA-CC-ATCCCCATGCGC AGGT GGGCATGGGAATAGGGCACCTGAA GCGACAAACTGATTC  60 58
    AM1_4440 4468590 .. 4468603 -  -2.4  -5.65177   ACAGCGATAAAAAAA               TGCT CTGAGT AGCA                GTTCATCATCAATCT  82 62
    AM1_4439 NONE
    AM1_4438 4466731 .. 4466745 -  -4.3  -2.55351   GGGTCTTATACCAAT               TCACT TATTG AGTGA               CCTTTATAGTCAAAG  45 15
    AM1_4437 NONE
    AM1_4436 NONE
    AM1_4435 NONE
    AM1_4434 4461855 .. 4461871 -  -3.7  -3.90316   AGTTGGCTAAAAACA              GCTAG ATTGTTG CTAGC              TTACCTATCCAATTC  56 39
    AM1_4433 4461362 .. 4461373 -  -2.2  -2.54371   TCCGCCAAACAAAGT                CTGC GCCT ACAG                 TAGAAAAACACCACT  39 47
    AM1_4432 4460498 .. 4460539 -  -9.6  -3.34962   CGGGATATGGCAGAA CGCCTGCTG-GA-AGCCCATC AGC GA-GGGCTGTGGCAGCAGGCG GATCCAGAAACGGTA  73 204
        cikA 4453976 .. 4454000 -  -5.7  -3.24365   TGACACGTTAGAACA          TGACTAGTGGT GAA ACCACAACTCA          ATCGAGTGACTACTT  55 335
       psb27 NONE
    AM1_4425 4450166 .. 4450214 - -26.4  -3.44319   GCTAACCCATCACAA TATGCAATACCCCCCTTTTCTC AGGTA GAGAAAAGGGGGGTATTGCATT AAACCCAGAAAGGAT 100 56
    AM1_4423 4448760 .. 4448773 -  -5.3  -3.03619   AACCAGGGTTCAATA               CAGAT CTTG ATCTG                GCGCCAAACCTCGGT  52 6
    AM1_4422 4448259 .. 4448288 -  -4.3  -4.24404   AGCTAAATCCCAAAA       CGATTCATCTTGC ATGG GGTAAATGAATCG        TTTCAACTGATTAGC  63 235
        aspS 4446059 .. 4446069 -  -5.4  -3.05596   GAGTCTCTCACCTAA                 GTGA GTT TCAC                 CTAGGCTTAGACTTG  52 146
    AM1_4420 NONE
    AM1_4419 4444252 .. 4444266 -  -5.6  -5.03314   TGTAGTTTCAAAAAA               GCCGAT TAA AACGGC               TACCATAAATATCAG  82 46
    AM1_4418 NONE
    AM1_4417 4442203 .. 4442214 -    -3  -3.02829   TAGATCTTGTGAAGA                TTTC TAGA GAAA                 TAGAAGGATAGGAGA  44 54
    AM1_4416 NONE
        argH 4440286 .. 4440298 -  -4.8  -3.67597   GCGTCTAGTCAAGAA                GGAG TGGCG CTCC                AGTATGAACGTGCTC  57 190
        pyrR 4439367 .. 4439377 -  -3.2  -3.29461   TAAGTTTCTGTAGAA                 CCCA TGC TGAG                 AGGCGTTCAATGCTT  47 46
        groS 4438865 .. 4438884 -  -3.5  -5.23292   TTAGACAAAATAAAA            TTGCCCA GTTGAA TGGGCAG             AACGAATCGAAGGAT  77 55
       groEL 4437131 .. 4437152 - -15.9  -5.64873   GGCAAGAACAAAAAA           GAGGGCGGT AAAC ACCGCCCTC            TGGGTCTAATCAATT 100 53
    AM1_4400 4427092 .. 4427116 -  -4.2  -3.74713   GAAAAACGTCAACAA          GCTGCGTTTG CAGGT CAATAGCAGC          CGGGATACCACCCTA  55 220
    AM1_4397 NONE
    AM1_4396 NONE
    AM1_4395 4424570 .. 4424584 -  -2.8  -2.83715   GTGAGCATCATGAGA               GCCACA TTT TGTAAC               ATCGACGAAGGAGTG  42 72
    AM1_4394 NONE
    AM1_4393 4423484 .. 4423512 - -16.9  -3.38088   AACCGACTGAATCAA        TAACCCAGCAGAA CCA CTCTGCTGGGTTA        TTTGTCTATTTTTCT 100 31
    AM1_4391 NONE
    AM1_4387 4417892 .. 4417907 -  -7.6  -3.36492   TTGCCAACTCTAGAA              TCAAGG GTCA CCTTGA               TACTTGTGTAGCAAT  66 67
    AM1_4386 NONE
    AM1_4385 NONE
    AM1_4384 4415502 .. 4415523 -  -7.3  -3.06183   GTGAGGTTCAGGTAA           TCGGAGATG GAGT CATCTCCTA            TGATGTTGATGCTAA  59 163
    AM1_4378 4409505 .. 4409516 -  -4.4   -3.0247   AACCCTTAGATAAAG                CCAA ACCA TTGG                 TAAATCGTCAGAGAG  47 165
    AM1_4377 4408476 .. 4408486 -  -5.4  -3.53343   AATTTTCGCTCTAAA                 TTGG TTG CCAA                 GAGGTTATCAATTGC  57 137
    AM1_4376 NONE
    AM1_4375 4405192 .. 4405202 -  -3.2  -3.31501   ATCAACCGGGCAGAA                 CCAA TTG CTGG                 CTTTGTGACCGGAAG  47 188
         fni 4403756 .. 4403777 -  -5.8  -3.61536   AACTCAATCGCCAAA           TCGCCATC TTAGGT GTTGGCGA            CTTTTTTGGTGAGAT  59 353
    AM1_4371 4401530 .. 4401542 -  -4.8  -3.42621   AACGTTAAGGTATAA                GGTG ATTAA CACC                TAGGTTATATATCTT  55 39
    AM1_4370 4399827 .. 4399852 -    -9   -4.9138   ATGATTCAAATAAAA         CCCCTCATCT GGAAAT AGGTGAGGGG          TTTCTATGTGTAGCA 100 88
    AM1_4363 4392678 .. 4392703 -  -9.8  -4.72029   GGCAAGTCAATAAAA         CAGCGATACGC TAGAT GCG-ATCGCTG         AGGGGTATGCATAGA 100 94
    AM1_4362 NONE
        lpdA NONE
        trpC NONE
    AM1_4359 4388349 .. 4388361 -  -3.4  -3.57462   CAGTTGACTCGTAAA                GCTT TCGAT AAGC                TCAGCCTTTTTTTAA  51 70
    AM1_4358 4386979 .. 4386995 -  -4.4  -3.63744   TGCCTGTCTAAAATA             CTGCGGG AATA CCC-CAG              GGATCTTAGGCAAAA  54 59
        purN 4386231 .. 4386245 -  -2.8  -2.53118   AAGAAAGAAATAAGC               CTAATC ATA GATGAG               AGATCTTGCATCTGC  41 49
    AM1_4356 NONE
    AM1_4354 NONE
        folE NONE
    AM1_4341 4369108 .. 4369121 -  -3.8  -2.98823   CTTTGCCTACAGATA               CTCC AGTGCA GGAG                ATTACGGAAGCTCAA  47 133
    AM1_4339 4363204 .. 4363222 -  -3.1  -2.90496   GGGGGTCGCAAATTA            GCCTG-GA TTAA CCTCAGGC             CCTTCGAAGAATCTG  44 88
    AM1_4337 4360912 .. 4360931 -  -2.8  -3.24825   CCAGTTGAATCAATA            GGGATG CTGGCCCT CACCCC             CCGGCCCCCTCTCCC  46 134
    AM1_4336 NONE
    AM1_4325 4351588 .. 4351614 -  -5.3   -3.4331   AGCTGCAGGAAAAAC        TAGATATTGCTG ATGA CAGCA-CATCTA         TGGTGGAAGAGGGCT  57 46
        pheT 4336540 .. 4336559 -  -5.6   -3.7282   GTATTGGAGCAAGAA            TGGCGACG TATG CAGCGCCA             ACAGAAGCCTTTGGC  59 467
    AM1_4312 4334300 .. 4334311 -  -2.2  -2.70826   TAGACGCATACAGGA                GACT CCAA AGCC                 CGACTCTCAGCACCA  40 128
    AM1_4311 4332995 .. 4333007 -  -4.1  -3.53811   TTGAGGCCCTCTAAA                GCAGA CCC TCTAC                TGAACCTCGATCCCA  52 22
    AM1_4310 4332134 .. 4332155 -  -3.1  -3.40331   AACTGAGTCAAAAAG           TTTACGA-AC CTG GCATCGTAAA           AAACGTTATGCAACC  47 5
    AM1_4309 4331331 .. 4331345 -  -3.5  -4.36914   TCCTTTGGGAGAAAA               TCAGG GATTG CCCGA               GATTAATTTTTGGAA  63 76
    AM1_4308 4329744 .. 4329758 -  -2.1  -2.85712   GCACAGCCACAAGGA              GGT-CG CAAT CGCACC               AGTGTGGTATGGCAG  41 185
    AM1_4307 4327103 .. 4327124 -  -3.7  -3.35813   GGCTACGGCAATCAA           TC-CATTGGC AAG GCCGATGAGA           TAGATACCTTTTGGC  48 489
    AM1_4304 4322546 .. 4322577 -  -3.1  -2.87211   AGCCTGCTGTAGAGA      GACCGTCT-ATTCA ACCGG TGACTGAGACAGTC      TCAAAGTGTGGCCAG  42 74
    AM1_4302 NONE
    AM1_4301 4320614 .. 4320625 -  -7.2  -3.22298   TCTAGCCACGATCAA                GGGG TGTT CCCC                 TGACACTGCTCGTTC  62 78
    AM1_4300 NONE
    AM1_4299 NONE
    AM1_4298 NONE
    AM1_4297 4318391 .. 4318421 - -12.6  -3.07013   GATTGTCTGAACAGA       CTGGTAGGCTTAGC TTT GCTAAGCCTACCTC       TTTCTTTTGCAACCT  93 45
    AM1_4295 4314124 .. 4314136 -  -3.5  -2.99558   CTAGAATCTATAAAG                TATTT TCT AAATA                TAATGATCACAGGCT  46 19
    AM1_4294 4313038 .. 4313056 -  -2.5  -4.77567   AGTTGCAGAATAAAA             TTTAATG ATTAA CACTAAA             AATTAAGTTAAGTAA  67 72
        thiO NONE
    AM1_4290 4309800 .. 4309823 -  -8.9  -5.46629   AACAGCGCAAAAAAA          GGGTAGACC CGACTC GATCTACCC           CTTGCTCCTACTCAG 100 64
    AM1_4288 NONE
    AM1_4287 4307977 .. 4307991 -  -4.3  -2.55351   CTGCGTCATACCAAT               TCACT TATTG AGTGA               CCTTTATAGTCAAAG  45 15
    AM1_4286 4306618 .. 4306628 -  -4.6  -3.14931   TTGATTCTGGATGAA                 GCCA CCT CGGC                 GGTAGATAACGAAAC  50 259
    AM1_4284 4303707 .. 4303720 -  -3.1  -2.95073   GGGCCAACAGTAAAC               GACAA GGGT TTGCC                ATAGAACTTGACCCT  44 142
    AM1_4283 4302822 .. 4302834 -  -6.3  -3.44319   TCCAATCGATGATAA                GAGAA CAA TTCTC                TTGCATTGAATGGAA  61 344
    AM1_4281 4298759 .. 4298772 -  -2.4  -4.18494   CAGGTCTACCCAAAA               CAGT GGTTGG ACTG                GACTATGCGGAAGAT  57 433
    AM1_4277 4296493 .. 4296504 -  -2.2  -3.39327   TGGGGAGAGCTACAA                CCCT ATAT AGAG                 TATTCATCTAATAAA  45 289
    AM1_4274 4293836 .. 4293852 -  -4.4  -2.70932   TCTGCCCCTTAAGGA              CCGATC GATGG GATCAG              CCCCAACAGTATGGG  45 2
    AM1_4271 NONE
    AM1_4270 NONE
        vanW 4287711 .. 4287723 -  -2.7  -2.70298   TCTTCCAATCAGAAG                CCATA CAA TATGA                GTCTTTGCAGTATCC  41 49
    AM1_4267 4284963 .. 4284980 -  -6.3  -3.13073   ATTGCCATCAAGATA             GTTG-GGG CTG CCCTCAAC             ATGGGTTGGAGCAAT  57 89
    AM1_4265 4282482 .. 4282521 -  -5.8  -2.52946   CCTTTTCAGAAAAGG  TTATCCCCCAGTAGTCA TTCAACC TG-CTACTGGGGGTTTA  TTTGGCACCACCGAG  52 54
    AM1_4263 4280925 .. 4280936 -  -5.8  -2.91912   CCACTGATCCAGATA                TCGG AATC CCGA                 TAGCAGACTAACGAC  54 33
    AM1_4262 NONE
    AM1_4261 4279142 .. 4279153 -  -4.4  -3.36823   TCCGGTAAAATTGAA                TCTG AGGC CAGA                 TTCGCCTTGCAGAAG  51 319
    AM1_4259 NONE
    AM1_4248 NONE
    AM1_4247 NONE
    AM1_4246 NONE
        cobQ 4263270 .. 4263288 -  -3.8  -4.41353   CGAGACAGATGAAAA             CTGTCTGA CTC TCTAACAG             TATGGCTAGAGCTTG  65 369
    AM1_4243 4260568 .. 4260587 -  -8.6  -3.56594   GGAAACGTTCCCAAA            CTCCCCTT TAAG AAGGAGAG             ATATGAATAGGAATT  71 173
    AM1_4235 4254299 .. 4254309 -  -2.4  -5.22289   CAGCAAACACAAAAA                 CAGG TAA CCGG                 TACGGTGCGGGTGAA  76 230
    AM1_4233 NONE
    AM1_4232 4251861 .. 4251878 -  -4.9  -3.14463   AAGGGGTTTGAGCAA             CTCACATC AAA GATG-GAG             GCATTTTGCTGTCCA  50 108
    AM1_4230 4249365 .. 4249381 -  -3.6  -3.91028   AAGCCAAACGAAGAA              GCCAGC ATTTA GCTTGC              AAATTAGTGTGTCAG  58 377
    AM1_4227 4249152 .. 4249164 -  -3.3  -4.32046   TGCTCAAAAAGCAAA                TGCAC AGT GAGCA                ACGGCCCAAGTTGTA  63 114
    AM1_4224 4245037 .. 4245053 -  -2.2  -3.58533   GGATAAGGGGCTAAA              CCACTT TGTTG AAGGGG              TCATGCTCGGCCAAT  49 4
    AM1_4223 NONE
    AM1_4222 4243478 .. 4243492 -  -5.6  -2.78384   CTCGTGTTTAGGATA               GCTTGC GGG GCGAGC               TTAAGCCGTTTTGAC  53 26
    AM1_4221 4242233 .. 4242248 -  -5.4  -3.53012   CTGCCCTTTTGCAAA              CCGGTT TACA AACCGA               TCCGGTTCAACCTCA  56 279
    AM1_4218 4240428 .. 4240438 -  -3.2  -3.74526   TTACTAATTTAATAA                 CGTC TAG GACA                 ATCTTTGTGATTTAA  53 176
        phoU 4239320 .. 4239344 -  -3.6  -3.28712   TCGTTCTCGCCATAA         TGCCAGGAGCA TCTG TTCTCCTGG-A          GGGAATAGCTTGACA  49 411
         zam NONE
    AM1_4215 4236270 .. 4236286 -  -2.2  -2.92102   AGACTCTTTAGAAAT             GCC-GGC CCAA GCCTAGC              TCACTTACCACCCTA  42 30
    AM1_4213 NONE
    AM1_4212 4233244 .. 4233255 -    -3   -4.3255   TCGTGAAGTAAGAAA                CAAT ACCT ATTG                 TAAAAGACTCTTCGC  61 45
    AM1_4211 4232385 .. 4232396 -  -4.4  -4.02334   GATTCAGACTACAAA                GGTA AAGC TACC                 TTTAACCAAGTTCTG  60 468
    AM1_4209 4230218 .. 4230237 -    -3  -4.13728   GAGATATCTTCAAAA            CTAA-ATTC GAT GAATATTAG            GCCAGCTGGCAGAAT  58 149
    AM1_4208 4228198 .. 4228231 -  -8.3  -3.63837   AGAAGGTGTCAACAA     TCAAGCTTGACGCTCA ATT TGC-CATCAAGCTTGA     TTCCTTATCCAATAG  73 48
    AM1_4200 NONE
    AM1_4199 4222632 .. 4222647 -  -6.2  -4.34402   TCTTCGAGAGGAAAA              TCAGTA TAAA TACTGA               AAGCCTTTCTAGAAT  72 189
    AM1_4198 NONE
    AM1_4197 NONE
    AM1_4196 4220879 .. 4220889 -  -3.2  -3.20382   TCCTATATCTATCAA                 GACT TGT AGCC                 TTTTCCTGACTTCTT  46 164
    AM1_4195 4219384 .. 4219405 -  -5.9  -3.44553   TCAAAAACCCCAGAA           CATTCAAGC GTTT ACTTGAACG            AGTCGGTATTTCCAG  59 80
    AM1_4194 4218967 .. 4218983 -  -5.1  -5.28778   AGCATCCACAAAAAA              GACAAGA CGC TCTTGGC              GTTGAGCTTCCTCTA  84 49
    AM1_4193 4218151 .. 4218163 -  -4.1    -4.208   CGTTAAAACTAGAAA                CTCAC TCT ATGAG                CTGGGTCAACCTCTC  62 295
    AM1_4189 4213374 .. 4213404 -  -9.8  -3.83205   ACGCCTTACATGAAA       GTAAACACTGCTCC AGA GAAGCCGTATTTAC       TTTCTAGTCCTAGAT  84 96
    AM1_4188 4212577 .. 4212593 -  -5.1  -3.34517   ATGCGTCTTTAAATA              GCCTTCT ACA AGAAGCC              GCCCATAAACTCTTT  54 434
    AM1_4185 4211035 .. 4211057 -  -2.6  -3.72576   GGTTGGGTGAGCAAA           GCAGTCAAGC CTC ACTCAGCTGC           TCTCCTCAACAGCGT  51 113
    AM1_4178 4206141 .. 4206167 -    -3  -3.67296   GATCATCCATTCAAA         GCATAGTGCC ATTCTGA AGCACTATCC         GTTAGATAGCACTGC  51 95
    AM1_4177 4205285 .. 4205307 -  -3.5  -3.68662   AGATAAGACTCGAAA           CTTTATTCT TGTAG AGAATAATG           TGTTTCGAGAGAATA  53 298
    AM1_4175 4203679 .. 4203696 -  -5.5  -3.70149   TCCAGATTATCTAAA             GCAGTCG CCCC CGATTGC              CGTTCCCGAGGATAT  59 440
    AM1_4173 4202295 .. 4202306 -    -3  -3.95148   ACATATCCAAGGAAA                TCTA GGGG TAGA                 CGGATCGGCAAGGCT  56 69
    AM1_4172 NONE
    AM1_4171 NONE
    AM1_4169 NONE
    AM1_4161 NONE
    AM1_4155 NONE
    AM1_4154 4189310 .. 4189327 -  -2.7  -2.61831   GTCAGGGTAAAAACC             CGTGGATG AGA CATCC-CA             TCAGTCCTCAGCAAC  41 182
    AM1_4153 NONE
    AM1_4152 4187797 .. 4187814 -  -6.3  -3.37568   GATAGACAAAAACCA             TCTCTGG GTCT CCAGAAA              GATCGAGACCGAATT  59 210
    AM1_4151 NONE
    AM1_4150 4186774 .. 4186786 -  -3.4  -2.80195   ATTCAGCACCAATTA                GTTG AGCTG CAAC                TTGAGTAACGAAATA  43 232
         ung 4185836 .. 4185848 -  -5.5  -3.87505   ACCATAGGATAACAA                GGCTA GGT CAGCC                ATGTTGGAAATAATG  61 159
         mfd 4181950 .. 4181963 -  -4.5  -2.56596   TTTGCGAGTAATCCA               GAAGC CTAT GCTCC                TCAATATGGTGGATT  46 326
    AM1_4144 4179617 .. 4179628 -  -2.2  -3.70709   ACTAGCGAAGAAATA                CACC GAGC AGTG                 GCACAAATTTGCAAA  50 223
    AM1_4142 4178455 .. 4178477 -  -4.9  -3.53012   TCTCCTTCCCCCAAA           GACTTCTTG TATTT CAAGAAACC           TATCAAGAAAACCAT  55 321
    AM1_4139 NONE
    AM1_4138 4175160 .. 4175175 -  -3.2  -3.30554   GGAAGCAATGATCAA              CTCCAT GACC AAGGAG               GAGCGCAAAAATCCC  48 409
    AM1_4131 NONE
    AM1_4130 4166567 .. 4166585 -  -7.4  -2.70932   CGTTGCGTTTAATGA             CTCATCCT TCA AGGGTGAG             AGTTAACCGACTACT  58 474
         slt 4164224 .. 4164259 -  -7.6  -3.61398   TCTTCGGTTGAACAA    CTGAT-CCATCGAGCCA TCA TGGCTCAAAGGTAACAG    AACAGACAGGGGCAT  70 76
         ppk NONE
    AM1_4124 4159558 .. 4159570 -  -2.7   -3.3705   AAAGATATGGGAGAA                TCTTG GAT CAAAA                ATTTGCGCCAAGTCA  47 270
    AM1_4122 4156536 .. 4156558 -  -5.4  -4.59773   GCGGAGTTGGAAAAA           CCAGGCCGCG ATC CTCGGGCTGA           GTTCAAATACGCCAC  73 405
    AM1_4120 4154113 .. 4154134 -  -9.5   -2.7419   AGATGACGTCAATTA           TTGGGGAAC AGAT ATTCCCCAA            CTCCTAGAAGATGGC  66 238
    AM1_4109 4146059 .. 4146073 -  -3.6  -3.48395   ACTTCTTTTAGAGAA               GAAAAT ATG ATTTCC               TCGTCATATCGTGTC  51 43
        argB NONE
        trmD 4144126 .. 4144139 -  -5.3  -2.81547   CTTCCAGATTAAGGA               TCTGA GGTA TCAGA                TTTTTTGAGCCATTT  50 5
    AM1_4104 4142878 .. 4142897 -  -2.2  -2.71041   AAGGCCAAGGACAAC            CGTGATTAG TTA CTAATC-CA            TCTTTGATAAAGCTT  40 11
    AM1_4102 4142518 .. 4142539 -  -5.9  -3.38281   GTATTTAAAAGTCAA           TACCTACAA TGCT TTGTGGGTA            AGTTGTTGGGCTGAT  57 146
    AM1_4101 4141312 .. 4141370 - -10.5  -3.24422   TAGTGTCAAAAATTA TTGATGCTTACGAGCATTATGAGACTA AAAAA TAGTCTGATAATGCTCGCGAACAACTA TATTTTCGCTTAACC  78 47
    AM1_4097 4138720 .. 4138738 -  -3.8  -4.36914   CGTGGCGCTAGAAAA             CAGAGACT TTT AAACTCTG             TTCTCGTCACCCCAA  63 464
    AM1_4096 NONE
    AM1_4095 4137606 .. 4137617 -  -4.4  -2.81181   ATAAGAGGAATATCA                CATG TCAT CATG                 ATCCACCTCGATATT  46 68
        gntK 4137068 .. 4137083 -  -3.2  -3.44146   CTGGTCTACAATCAA              CTAGCG CTCC CACCAG               ACTCGGTTCAATTTG  49 10
    AM1_4093 4136250 .. 4136267 -  -3.5   -3.6502   TAGGTCTTAGCTAAA             TTAGTCT GAAA AAACTAA              TTTTTTGTGCTGAGA  53 78
    AM1_4092 4136085 .. 4136104 -  -2.1  -2.54896   TCTGTACCCAAGTTA            TCGAGAA TCATAG TTCTCGG             GCCTATCAACACTAA  39 3
    AM1_4091 4135482 .. 4135500 - -14.6  -2.91912   CTATTTAGTCAGATA             CCTCCGGT AAA ACCGGAGG             CTTGAATTAGAACCC 100 58
    AM1_4090 4135307 .. 4135326 -  -7.2  -4.94902   GAATGAGGAGAAAAA            GAGGGCTGT GGA ACAGC-CTC            ATACCCCACATTTGC  89 42
    AM1_4089 4134694 .. 4134712 -  -3.9   -3.6249   GACAAAAGACCATAA            CG-CATCA GCAT TGATGACG             TCAGTCGAAACGGCC  53 366
    AM1_4088 NONE
    AM1_4087 4134102 .. 4134134 -  -3.3  -2.70667   GACAAACTAAGGAAT      GGGCAGTGATTTAGA ATC TCCAACCCGCTGCCG      GAAAGATAGAACCCC  42 61
    AM1_4086 4133857 .. 4133869 -  -2.7  -2.89191   GGAGATCTTTACAGA                TAGAA GGC TTCCA                CTAGAGTAAGGCTCA  42 6
    AM1_4085 4132412 .. 4132423 -  -2.2  -4.47707   TTGCAGGAAAAATAA                CAGA TGGT CCTG                 AATCGGTGTAGATAT  60 225
        psbD 4131251 .. 4131270 -   -15  -5.22312   ACTGACACTAAAAAA            GCCCCCGA TTAT TCGGGGGC             TTTCCATCAAACTTT 100 59
    AM1_4083 4130760 .. 4130772 -  -3.4  -2.76261   CTGCAATCGTTAAAG                CCAA ATGCA TTGG                AGCCAAAATTTTTCC  43 7
    AM1_4082 NONE
    AM1_4081 4129150 .. 4129165 -  -5.4  -3.82205   GGAATAGAGCAATAA              GGGATA TTGA CATCCC               GCAGGTGATATTTCA  61 119
    AM1_4080 4128596 .. 4128606 -  -3.2  -3.20382   TCCTATATCTATCAA                 GACT TGT AGCC                 TTTTCCTGACTTCTT  46 58
    AM1_4079 4127276 .. 4127290 -  -7.2  -2.81312   AAGCGATGGACCAGA               CCAATT CTG AATTGG               AAGGCGGCGCTGTCC  57 104
    AM1_4077 4125830 .. 4125840 -  -5.4  -3.55262   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 8
    AM1_4076 4124578 .. 4124589 -  -7.2   -3.5393   ATCAGCGTTGGCAAA                CGGC TGAA GCCG                 CCTTATATCAAGGTG  64 367
    AM1_4073 4120451 .. 4120467 -  -2.1  -3.31461   TATTTATTCTCAGAA              CCTACGG ATA CAGTGGG              CATGGAGGACTTCCT  45 63
    AM1_4071 4117437 .. 4117449 -  -9.1  -4.13945   ACTTTTATTGTAAAA                GGGGA GTG TCCCC                CATTTATAGATATCT  83 45
    AM1_4069 4115926 .. 4115936 -  -5.4  -3.59627   AGCAAAGTTGGCAAA                 CTCT GAA AGAG                 GGGCTGCTGTTTGGC  56 510
        coaD NONE
    AM1_4067 NONE
    AM1_4066 4112861 .. 4112878 -  -7.7  -4.84359   TGAGCGCGAGAAAAA             GCGACAA AGAC TCGTCGC              TAAATACGCTCACAA  86 404
    AM1_4061 NONE
    AM1_4060 NONE
    AM1_4059 4107468 .. 4107478 -  -3.2  -3.96705   CCTAGAAAAGTTAAA                 CCAA GAG CTGG                 GTGACCTTGAGGCTT  58 385
    AM1_4057 NONE
    AM1_4056 4104658 .. 4104673 -  -5.4  -2.60075   CTTCTTGGAATTAAG              TC-GCCC ACC GGGCTGA              TCTCAAAATTGCTTC  49 5
    AM1_4055 NONE
    AM1_4054 4098655 .. 4098665 -  -3.2  -2.80779   CTAAGACCAACATTA                 GGAA TAA CTCC                 CTGAGCTTAAGCATA  43 66
    AM1_4052 4095506 .. 4095526 -  -5.3  -3.14132   CCCTGCTGCGACGAA            CCGATCGCA TTC CGCAAGCGG            CCCGCCATAGTGAAA  52 396
    AM1_4051 NONE
    AM1_4050 4093293 .. 4093305 -  -3.3  -3.63627   GCGCGAGATCGCAAA                CGTGC CCA GCAGG                ATCAACGCATTCATG  53 103
    AM1_4047 4091664 .. 4091674 -    -4  -3.66732   GAATGACTTGAATAA                 TCTT AAT AAGA                 CAGATTGGGTTTTTG  54 17
    AM1_4045 4090791 .. 4090801 -  -5.4  -3.08798   AGTGTTGATCTAATA                 GTGT TGA ACAC                 TCAAGATTTGTGTTA  53 9
    AM1_4044 NONE
    AM1_4043 4088437 .. 4088456 -  -7.9  -3.20573   CTAGTCATAGTAATA            GTTTGGG GACTGA CCCAAAC             GTGTTTAACGAGTCA  63 63
    AM1_4037 4083992 .. 4084002 -    -4  -3.14132   CGGTGTTGTCATCAA                 TCAT TGT ATGA                 TTGCTCTCCCACACG  49 124
    AM1_4036 4082351 .. 4082361 -  -3.2  -2.61582   GAGGGTACGCAGAAG                 CTGG CAC CCAA                 TTTTGCTAGTGTCAC  42 67
    AM1_4034 4081621 .. 4081633 -  -3.4  -3.65351   CTATTTCCAGCGAAA                TGGA TGCAT TCCA                CTCAATATACGGGGC  53 411
    AM1_4031 NONE
    AM1_4030 NONE
    AM1_4029 4079190 .. 4079201 -  -4.4  -3.49668   AAAGTCCTCAGATAA                TCAG GCTA CTGA                 GATAGGTTTACGTTC  52 19
    AM1_4028 NONE
    AM1_4027 4077065 .. 4077075 -  -3.2  -2.89655   CTGTTGAAAAAAATT                 GTCC TCC AGAC                 CATTGATGACAGGCT  43 176
    AM1_4026 4076343 .. 4076355 -  -3.4   -3.6135   AAACAGATTCTCAAA                GTCT TATGT AGAC                AGGAGTATAAACTTA  51 429
    AM1_4025 4075969 .. 4075985 -  -3.1  -4.87665   TCCCATTGAGAAAAA              TTAAAAT GAC ATTTCAA              TACTGACACTTCATT  68 44
    AM1_4024 4073108 .. 4073119 -  -5.8  -3.76232   CGGCTAAACAGATAA                CCTG TTGA CAGG                 GTGCCCACCCAACCC  63 44
    AM1_4023 4072432 .. 4072460 -  -3.1  -3.38046   TGGGGATGGTAAATA        CCCTCAGGTTTCT GCA AACAACCTGAGCA        ATGCTCTCAAAGTCT  47 43
    AM1_4019 4068898 .. 4068910 -  -7.7  -2.72144   GTAGCGGTTCCAAAG                GTTGC ACA GCAAC                ACGGTGACTCAGTCG  60 210
    AM1_4012 NONE
    AM1_4011 4059168 .. 4059180 -  -3.5  -4.90525   GAACTTGAAATAAAA                TAAAA ACC TTTTA                GCATGATTTTTTGCT  70 194
    AM1_4010 NONE
    AM1_4009 4054980 .. 4054991 -    -3  -4.11216   TCTTGACTGCCAAAA                TCTT GCTC AAGA                 GCTATTTTATCAAAT  56 399
        gltA 4049120 .. 4049133 -  -2.3  -3.78934   CTCTCCTGATAATAA               GGAGC TACC GATCC                ACCACAGGAATATAG  51 16
    AM1_4001 4048090 .. 4048103 -  -8.1  -3.44888   AAGTACATCGAAATA               CCCCA ACCT TGGGG                TTAAGAAACTTTGTC  68 39
    AM1_3998 4045873 .. 4045901 - -11.1  -2.78508   CATCCGCTAAAACAT        TGCAGATCTAAGA CAA CCTTAGATCTGCC        CAAAATGAGGTTAAC  77 192
    AM1_3997 NONE
    AM1_3996 NONE
    AM1_3995 4042531 .. 4042549 -  -3.1  -4.03141   AGCACCATCAAAGAA             CAGTTTG CAGAC CAAGCTG             GCATTCCGGTCCGAT  56 445
    AM1_3993 4040617 .. 4040633 -  -2.1  -4.79223   TGAGATTAGTAAAAA              CAGCCAG CCC CTTGCAG              CTAAAGCATCCTAAA  66 57
    AM1_3985 NONE
        ispD 4034229 .. 4034242 -  -2.4  -4.84761   AGATTTTGATAAAAA               TACC TTGACG GGTA                AAGTCAACGGCGTGA  70 159
    AM1_3982 4032407 .. 4032434 - -17.2  -3.57144   CCTTTTAGGCTGAAA        TAAGGCAGTGTG AGAA CACACTGCCTTA         TTTATTGTCTTTAAA 100 87
         eno 4028177 .. 4028221 - -17.4  -3.65991   ATCGCTTTAACAGAA GACTCTTCTTCGGAGTGG TTAAAATCG CCACTCTGAAGAAGAGTC TTACCCTGGCCCTAA 100 26
    AM1_3975 4024672 .. 4024688 -  -8.7  -5.81412   TTTAGGCAAAAAAAA              TAACCCC AGC GGGGCTA              TTGGTGTAAGGAGTG 100 155
    AM1_3974 4023033 .. 4023049 -  -5.1  -2.97934   ATATTCATGAAATGA              CGGTAGA GAC TCTACCC              GCGACGGTAACCTCG  51 453
    AM1_3972 NONE
    AM1_3971 4019483 .. 4019513 -    -9  -2.52543   ATTGGCTTCAATCTA       GGGTAAGCAATCTA CTC TAGAATGCCAACCC       TTCCTTAAGCTTGGC  65 30
    AM1_3970 4019037 .. 4019047 -  -3.2  -5.02074   CTATTTTTTAAAAAA                 CTCC TAT GGAA                 TTGCATGATCAGGCT  75 226
    AM1_3968 NONE
    AM1_3967 4016663 .. 4016676 -  -6.7  -3.10053   AGAGATTTCAACACA               GCTCT TAGT AGAGC                CTATCATCAACTACA  59 113
        psbU 4016050 .. 4016066 -  -2.2  -5.08088   AAGGTTCAAGAAAAA              TTGCTG TAATG CAGCAT              AAAAAATACTCCCCA  68 149
        nadB 4014024 .. 4014042 -    -3  -3.53012   TCCCTTTTCTCCAAA             CTCATCTG ACT CAGGTGCG             AACGGTGCCGGTGCA  49 352
    AM1_3963 4012885 .. 4012897 -  -3.3  -3.51232   TTGTGGGCAAAGGAA                CTGCT CAT AGCGG                CTTAGTCTGGAACAA  49 27
        scpA 4011741 .. 4011756 -    -4  -3.51557   GCCTTTAAATAAAAT              TTCTCC TAAT AGAGAA               TTTGCAGTGCCCAGT  52 406
    AM1_3961 NONE
    AM1_3960 NONE
    AM1_3959 4010102 .. 4010132 -  -9.8  -5.60993   GGGGTCACAAAAAAA       CAAAGGGAGTCA GGATCTA TGACCCCCCTTG       TCTGCGCGGCTCAAG 100 293
    AM1_3958 NONE
    AM1_3957 4008766 .. 4008805 -  -7.8  -3.57144   GCCTTTAGTGGCAAA  GGGATTGCTGGGGTCCAG ATTA CTAAAACCCAGCAGTTCC   CCTTGTGGACCATTC  66 99
    AM1_3954 4005932 .. 4005964 -  -4.2  -3.08798   AGCTCTCACCCAAGA     GAGCAGTACACAGTG CAAC CGCTGTGTAGT-CTC      ATGACCAACCCCATA  49 69
    AM1_3953 4004359 .. 4004388 - -22.3  -4.98255   TGTTAAGGATAAAAA       CGAGGCGAGCAAG ATAT CTTGCTCGCCTCG        CATCAGAAGAGGTTA 100 61
    AM1_3952 4002171 .. 4002200 - -10.1  -3.88787   GGATAGTTGCAGAAA       TGGTCTTTATCCA TTAA CGGATGAAGACCA        TTTCTGTTATTAAGG  84 419
    AM1_3949 3999126 .. 3999138 -  -6.3  -3.75169   TATCAGCCGATCAAA                GTGTT AGC AACAC                AGGTAGAAATCCAAG  63 113
        pfkA 3997105 .. 3997147 - -13.7  -2.91383   AGGGCCACCCAGAGA TTTCACACCTAAAAATGGG GGTGG CCAAATTTTAGGTGTGAAA TCAGGTGTGAAAGGG 100 51
    AM1_3945 3994059 .. 3994089 -  -3.3  -2.63089   GAGCACTCGAAAGAG      GACTGCCTGCTTTG ATAG CGAAACAGG-AGCC       ATTTTTTCTAGGCTG  42 54
        hemC 3993012 .. 3993023 -  -4.4  -2.66316   GGTGCTATCAGACTA                TCAG AGAT CTGA                 GGGACGAGCAGCGGC  45 14
    AM1_3943 NONE
    AM1_3941 3991079 .. 3991111 -  -3.3  -2.89055   TAAAGGGGCTATAGA      GGCTTATAGTCAGGC ATT GCAGGCCTATAAGCT      GAATGCCTATGCACT  43 382
        exoD 3987876 .. 3987890 -  -5.7    -4.208   TGTGAAAATCACAAA               TCCCT TATGG AGGGA               CTCAAACGAGCATTT  68 366
    AM1_3937 3986602 .. 3986619 -  -5.6  -3.60792   TCCCTAATCTTGAAA             CAGATC CTTCTT GATCTG              GTATTTTTTTTGGAG  61 162
    AM1_3935 3983326 .. 3983343 -  -3.4  -2.97158   CATGGGAAGAACAAT             CGGCAA TTCATT TTACCG              CCCAGGGGGGCTGTC  45 174
         efp NONE
        accB 3982113 .. 3982131 -    -3  -3.53722   TGCAGATCTACAGAA             CGCGAATT TTA AAGGCGCG             AACCTGAGCGGTGCT  49 154
    AM1_3930 3981313 .. 3981329 -  -2.2  -3.84266   ACACCCTAGATCAAA              CCTTGA GATTG TCAGGG              TTGTTAGAACAGCGT  52 224
    AM1_3926 3977772 .. 3977786 -  -4.2  -4.06491   TCAAGTTTAGACAAA               GGCATC TAG GATGGC               GTGCGGATTTGTAAG  59 277
        rpoD 3976758 .. 3976780 -  -8.6  -2.54193   TATTACCTCAATGCA           CCTAAAAATA GAA CATTTTTAGG           TGTGAGCAGTTAGCT  63 35
        mutY 3970487 .. 3970502 -    -4  -3.85698   GGGGCCGGGTATAAA              CCGTACT CAC AGT-CGG              GTGCCTCTCAGTAGG  57 62
        recR 3969737 .. 3969761 -  -6.3  -3.22388   CACGGAAGCCAGCAA          GCCTGCAGAAG CTG CTCCTGCCGTC          GACAATACTGAGGTC  57 158
    AM1_3915 3967572 .. 3967587 -  -3.2  -2.87564   GCACCTGTTTAGAGA              GGATTG CAAC CTATCC               GCAAGTCTAGCGGTT  43 507
    AM1_3913 NONE
    AM1_3912 NONE
    AM1_3911 3964465 .. 3964496 -  -8.9  -5.31275   CTGCACCATAAAAAA      TCCAGAGAGTA AAAAGAAACA TACTCTCTGGA       AAAAAATTGATAATT 100 112
    AM1_3910 NONE
    AM1_3909 3961259 .. 3961271 -  -2.7  -2.66316   CGCTTGAGCATATGA                TCTAC CCT GTAAA                CCTTCCCTCAATTCG  41 149
    AM1_3908 NONE
        ileS 3956202 .. 3956212 -  -2.6  -3.93367   GGTTTGAAGAAAACA                 TTTT GAA AAAA                 GTAAAAAATGAATTG  54 378
    AM1_3905 3955156 .. 3955166 -  -5.4  -3.05343   CTGAGATGGTCAAGA                 CGAT GGC ATCG                 GATCGGATTGTGTTT  51 417
    AM1_3903 3951442 .. 3951456 -  -5.6  -5.03314   TGGATCTGGAAAAAA               GTGCCA GTT TGGCCC               AACAGAAAGGCCGGA  82 294
        clpS 3945685 .. 3945707 -  -3.5  -2.88544   CTTTATTGCCAGACA          TCCCTT-AAG CGGC CTCCAAGGGA           GCCATGGTTAAACCC  45 7
    AM1_3895 NONE
    AM1_3894 NONE
    AM1_3893 3942057 .. 3942068 -  -7.2  -3.14944   GACCATGACATTTAA                GGGG TTTG CCCC                 AAACAACTTAGCATC  62 55
    AM1_3892 3940825 .. 3940860 -  -5.4  -2.90349   TGTGGAAAGGGAAAT    GGTACCC-CGGACGT GTATTGG ACGTCAGCGGGAACC    GTTACTTTATTACTT  49 117
    AM1_3881 3934267 .. 3934299 - -18.7  -3.01924   TAGGCTTGCTCAAGA      TAAATGCACACTAGC GCC GCTAGTGTGCATTCA      CTGTATCTAAAACTC 100 96
        cysI 3932045 .. 3932056 -  -4.4  -2.78596   CATGGCTTTATTACA                CCTA AAAT TAGG                 TGCAATTTAGGTCTG  46 32
    AM1_3879 3930684 .. 3930719 -  -6.8  -2.98472   GTCGATGAAAAATAG    GTCCCGACG-GATCGCC AGG GGCGACCACATCTGCAC    AAGGTGTTAGAGATA  58 118
    AM1_3878 NONE
    AM1_3876 3928971 .. 3928983 -  -4.8  -4.22652   CGATAGCATCCAAAA                CGGT TGGGC ACCG                AACCTTCCAGAGTGG  64 212
    AM1_3874 3926409 .. 3926424 -  -3.2  -3.78034   CATCCATAGGAAGAA              TGACCA AGTT TGGACA               AGAACTGGGCAATAT  53 106
    AM1_3873 NONE
    AM1_3872 3925717 .. 3925728 -    -3  -3.07487   TGATATCTCTAAAAC                TTTC ACTT GAAA                 TGGCTGACAGGAGAA  46 211
    AM1_3871 3925108 .. 3925128 -  -2.5  -3.48276   GCGGTGGGTATAGAA            GCGAGGA GACTGCT TCCTCCC            AAGGCCAACAGCATA  48 157
    AM1_3870 3922784 .. 3922820 -  -7.9  -3.31792   GCATCATTTGCACAA    CCTCCAGTAATGTCACC TCA AGTGACAACACGGGTGG    ATGACAATCCAGCAT  66 245
    AM1_3869 NONE
    AM1_3868 NONE
    AM1_3867 NONE
    AM1_3866 3915563 .. 3915574 -  -4.4  -2.90813   GAGCTGTGGAAAGGA                CTAG GGGG CTAG                 ATTGCGAGTTGATCC  45 141
    AM1_3864 NONE
    AM1_3863 NONE
    AM1_3862 3913075 .. 3913087 -  -3.3   -2.9732   GCCGAACGGAAATCA                GCCCC CTC AAGGC                GAACATCTGAAGTGA  44 72
    AM1_3861 3912235 .. 3912249 -  -8.6  -3.81146   TCCCCCAAGGAAGAA               TGCCAA AAT TTGGCA               ACATGGAAACTGCAA  73 334
    AM1_3858 NONE
    AM1_3857 NONE
    AM1_3856 3908573 .. 3908590 -  -2.7   -2.8194   GAAGGATGCACTATA             GCATTAT TGAA ATAGTGC              GTAGTCACAGTTTTT  42 457
    AM1_3855 3908116 .. 3908136 -  -2.5  -4.08546   ATGAGGAATGAGAAA            TCTATTTCC CTA GGATAAAGA            ATAGCAAAAACCTGC  57 47
    AM1_3854 3907103 .. 3907113 -  -3.2  -3.67792   GGATATCTACCTAAA                 CCAG CCT CTGA                 ATAATTCTCTTCGGC  51 87
    AM1_3852 3905243 .. 3905269 - -10.2  -2.91276   GCCTTCGTTATAAAT         CAGCTTTAGGGA CCA CCCCTAAAGTTG         TAAAGGGAAGTAATT  76 85
    AM1_3848 NONE
    AM1_3847 3900736 .. 3900752 -  -2.2  -4.81249   CTTCAAAGTTAAAAA              GAGCCC ATGTG AGACTC              TCTTTAAAATGGTTA  66 289
    AM1_3846 NONE
        prfC 3897513 .. 3897524 -    -3  -3.98378   CATATTTAACAACAA                CTTT ATTA AAAG                 TTTTAGAGGAATAGA  56 78
    AM1_3844 3897125 .. 3897159 -  -2.9  -2.94232   GTCTTTCGAAACAAC    CAGGGTAAGGCCAAAA TCTT TTATGG-CTCAGCCTG     AGGTAAGGTGCAACA  43 11
    AM1_3843 NONE
    AM1_3842 3895560 .. 3895585 -  -2.5  -3.61922   AATAGCCAGCTCAAA         CTTCATGCCAA GTTT TTGGCACTCAG          CTTTTCAAACTGTTG  50 2
    AM1_3841 3894891 .. 3894910 -  -3.5  -2.88822   GTCTCGACACAATCA            TCCCCCA TCTCAT TGGGGTA             CCAGCTGACTTAATC  45 15
    AM1_3840 3892794 .. 3892809 -  -6.2  -3.66999   AGCGACTTAGCCAAA              TCTTGA GGCT TCAAGA               ACAACAGACCCGCTC  63 76
    AM1_3838 NONE
    AM1_3837 3886771 .. 3886781 -  -3.2  -4.78933   GTAAAAGATAGAAAA                 CAGC GAC GCTA                 GGTTGCGGTTGTTGA  68 23
    AM1_3836 3885539 .. 3885559 -  -6.1  -2.73542   TTCAAGTCTTAATCA            GGAAGGTGA ACG CCACCTTCT            CAAGGGATTCTCACT  55 348
    AM1_3833 3882116 .. 3882128 -  -9.1  -2.55213   GATCTACTTAAGGGA                CCAGC AGC GCTGG                TTGGATCGCGCTCGT  63 256
    AM1_3832 3880902 .. 3880931 - -11.3  -2.64472   CAGCGTTTAAACCTA       GCCGCCACCCACC TGGG GGTGGGAGTCAGC        GGCATCGGTGGTTTC  72 168
    AM1_3827 3874454 .. 3874471 -  -4.8  -2.83271   CGACTGCTATAACTA             CCAGCC GGGCAG GGCTAG              CCTTAGTTTCATGAC  49 107
    AM1_3826 3873337 .. 3873351 -  -5.6  -2.61452   AGCAGGGTAAGCAAG               GGAGCC AAG GGCTAC               ATTTTTTGTTGGTAC  52 186
        ubiE 3871468 .. 3871488 -  -3.9  -3.15354   TACCTCAATCTAACA            GGCTAGCTT GGT ACGCTAGGC            TTTAGCCCGTCGCAC  48 373
    AM1_3821 3870114 .. 3870126 -  -7.7  -4.84359   CGAGTCGGAGAAAAA                CCCAA AAC TTGGG                ATGATGCGGTGATTC  86 104
    AM1_3819 NONE
    AM1_3818 NONE
    AM1_3817 3868016 .. 3868028 -    -2   -4.0274   GTGAGGATGAAAGAA                TTCT TTTTC AGAA                TATCTAGGATAGATC  53 177
    AM1_3816 3867161 .. 3867173 -  -4.1  -2.53995   ATTTAGCCCAAGCGA                TCAAG AAC CTCGA                ACACCTGTTTAACTA  44 168
    AM1_3814 NONE
    AM1_3813 NONE
    AM1_3812 NONE
    AM1_3811 3863884 .. 3863903 -  -7.8  -3.29511   TGGATTGTCCGAGAA            GGTGTGGT GCAA ACCCCACC             CGCAGATGTGGGGAT  64 359
    AM1_3806 3860402 .. 3860414 -  -4.7  -3.08679   TGTGTGCAGCCAAGA                TCCCG ATC CGGGG                CATCAGATAGACCCC  49 335
    AM1_3802 3858523 .. 3858533 -    -4  -3.28712   GTTCCGCTGTCATAA                 TTTC AGT GAAA                 TCCTTGCTCTCGCCA  51 264
    AM1_3800 3856887 .. 3856897 -  -2.6  -3.38966   TAGAATAGACAGCAA                 TTAA AAC TTAA                 TCTTTATTATCATAT  46 35
        psbI 3856667 .. 3856692 - -11.9  -5.38047   GATGGATACAAAAAA         CAGTGGGTAAG AAAA CTCACCCACCG          ACATCACACAAAAGA 100 82
    AM1_3798 3853629 .. 3853641 -  -7.7  -3.81948   GAAGCTGAGAAAAGA                GTGCT GAA AGCAC                TGGAATTATGGCCTC  70 311
    AM1_3796 3849427 .. 3849441 -  -4.2  -3.59315   CTAATCACCTGTAAA               GCCC TGCTTTC GGGC               TCTTGATTGTAAAGG  54 111
        psbQ 3848881 .. 3848901 -  -5.5  -2.71263   AATTGGCTTGAACGA            CTAGATTTA GGA CAAACCTAG            AACAGCATCAAAAGC  49 11
    AM1_3793 3848249 .. 3848262 -  -2.4  -5.24129   TTTTTTGAGAAAAAA               TCTG AGGACG CAGA                AGAGCAAACGGTGGG  76 432
    AM1_3792 NONE
    AM1_3790 3845277 .. 3845293 -    -3    -3.551   TGGCAAGGTACAGAA             CCG-TTC GATT GAAGCGG              AAGATGTGTCTACTC  49 482
    AM1_3785 3839424 .. 3839459 -  -7.6  -3.22841   AACCACAATAGGGAA    TCGGTCTGACAGCG CTCCCATT CACCGTCAGACCTA     GAGTGGGCAAAGCTT  63 170
    AM1_3784 NONE
    AM1_3783 3835928 .. 3835947 -  -6.4   -2.9155   CGCCGCAATACTACA            GCCC-GCAG CGG CTACAGGGC            ACACTGCAATGCTTT  56 402
    AM1_3781 NONE
    AM1_3780 3833574 .. 3833589 -  -4.6  -2.75064   CGTGCCATTGAATTA              GCACAG CTAT CTGAGC               TCGTGAAGGAGCTAC  47 378
    AM1_3775 3828525 .. 3828557 -    -7  -2.62192   TCCTACTCAAGGAAG      TCGCGATGCCCTAG AAAGG CTCGAACATCGCAA      TGGAGAACGCTTTTG  56 149
    AM1_3774 NONE
    AM1_3773 3827758 .. 3827775 -  -4.2  -2.60723   GCATGGCTAATTAAT             TTAGGT GCACTA ACCTAA              GAGCTGTCGTCGCTG  45 17
    AM1_3772 3826871 .. 3826899 -  -2.5  -4.91109   TTCCGATTAGAAAAA        TCTGACTAATTGT AGG ACAATAAGTAAAA        AGTGCTTTTAAAATA  67 339
    AM1_3769 NONE
    AM1_3768 3825090 .. 3825101 -  -4.4    -3.727   TCCAGCATAGTCAAA                GTCT CCTA AGAC                 AGGGATGCATGAACG  54 52
    AM1_3766 NONE
    AM1_3759 3818459 .. 3818498 - -18.2  -4.66938   ATCCTGAATATAAAA  GC-AAAGAGAGAGGATTGA GAA CCAATCCTCTCTCTTTTGC  GTCACTTACAAGCAA 100 160
    AM1_3757 3816928 .. 3816946 -  -5.3  -3.69256   AGTCACTTAACATAA             CCGCTTT TCACT AAAACGG             TTGTCCATGCACCTG  59 187
    AM1_3756 NONE
    AM1_3755 3815313 .. 3815338 -  -9.9  -3.24747   TTTCTATAGGATTAA         GGGTTTGG-TTA CAA TAAGCCAAACCC         TTTAGCCGTTTTAAA  76 71
    AM1_3752 3810500 .. 3810529 -  -3.5  -2.93422   AGTAATCACAATAAT       CGAGAGCAGAAAC TTTA GCGTCTAATCTCG        TTGAATGAGTTGAGC  46 17
        dacB 3809444 .. 3809477 -  -5.4  -3.68351   GCTTGAGCAGCCAAA     GCAGCA-AACAGTGA ACTAA CCACTGTTCCACTGC     GTCTAATGGAGGTTT  59 192
    AM1_3747 3806226 .. 3806236 -  -5.4  -3.14051   GCATTTTGAGCAACA                 GGTT GAA AACC                 TCACCCAAGAAAAGC  52 375
    AM1_3743 NONE
    AM1_3742 NONE
    AM1_3741 3798992 .. 3799012 -  -3.2  -3.30925   AAGGAGTAAAGAAAG            CTGCCAAC TGGAC GTTGACGG            GTATGCTGTTGCAGG  47 41
    AM1_3740 3796517 .. 3796539 -  -5.5  -2.53876   CTGTATCTCAATCCA           GAGGGCTCG AAAGG CAAGCGCTC           GAAGGTTTTAGCTTG  49 33
    AM1_3739 3792757 .. 3792768 -    -3  -3.03159   GGAATGGTGTCAAGA                TCAT TGGC ATGA                 CACCTACAAAGGGGC  43 247
    AM1_3735 3788595 .. 3788611 -  -5.8  -2.94679   AGCAACGTCAAAGGA              GCAGGC AGACG GCCTAC              AAACTTAACTGTACG  54 88
    AM1_3734 3787858 .. 3787869 -  -5.8  -3.70076   GTAAAGGTAGGGAAA                CCCT CATC AGGG                 GATATCGCCTAGGGC  61 53
         ndk 3787295 .. 3787321 - -12.4   -3.1355   TTGAGCTAGACCGAA         CACTCACCTCTA GAC CAGAGATGAGTG         CAAGGCGGAGTTATT  93 36
    AM1_3732 3786591 .. 3786607 -  -5.2  -2.81535   GCAGCATAAAACCCA              GTTATC GCGAG GATAAC              GATTAGCTTGCAGTA  50 28
    AM1_3731 NONE
    AM1_3730 3784986 .. 3785014 -  -4.6  -2.62463   CCGACGATCCAGAAC        CTCAAAACCTTG TAGAG CATGATTCTGAG        CGACCTGAATTAGCC  46 184
        psaM 3783774 .. 3783800 - -12.4  -5.81412   TGCAGCCAAAAAAAA         TAGTGCTTTACC TTA GGTAAAGCACTT         GAATTCGTATATTGA 100 119
    AM1_3727 3783449 .. 3783464 -  -2.5  -3.43689   CAAAGACAGAGAACA              CAACC TAGAGC GGTCG               TTGGGTTAACGTCTG  48 14
    AM1_3726 3782909 .. 3782934 -  -6.1  -5.31275   TTGGACTATAAAAAA         GCAGGCC-TACC ATA GGTTTGACCTGC         TTGAATGCTTGAATC  89 61
    AM1_3725 3782001 .. 3782018 -    -7  -2.86449   AGGCGATCACAATTA             TCCCGA TTGGGC TCGGGA              CATGGGCATTTGGCT  57 5
    AM1_3723 3780970 .. 3780984 -  -2.8  -3.23447   TTAATTCGTATAAGA               GGTG TAACAAC CACC               ATTAAGAATAGTAAC  44 67
    AM1_3722 3779832 .. 3779844 -  -3.3  -3.56594   CCAAACCGGCTTAAA                GATGG CAA CCGTC                AAACCCCTGGCTCAG  50 139
    AM1_3718 NONE
    AM1_3717 NONE
    AM1_3716 3774760 .. 3774811 -  -3.1  -3.38046   GTCTTAGGTGAAAGA CTCTGATTTTACGGTCCTGTAGGA GAGAT TCTTGCAGGACTGTAAAA-CAACG GGTTGACTAAAACTT  47 68
    AM1_3714 3771583 .. 3771607 -  -2.2  -2.90723   CGACGTCTAACCATA         TCTATCATACC ATTG GGTATGA-AGC          CGTTTGTGACTGGTA  40 128
    AM1_3711 3768798 .. 3768812 -  -2.8  -4.17516   CCCAAACCACACAAA               CATCAG TTA CTTATG               CTTTCTATGGCATGA  59 119
    AM1_3709 NONE
        prfB NONE
    AM1_3707 3765571 .. 3765603 - -11.3  -4.86133   GATAGATAGGAAAAA      CCCCACCGGTACT ATGGCTA AAAACCGGTGGGG      AAATGAGATCTGCTG 100 494
    AM1_3705 NONE
    AM1_3703 3760380 .. 3760393 -  -3.1  -2.78935   ACACTTTTTAGGATA               CCGAT GTTG ATCAG                AAAAACTGCCTCACT  43 108
    AM1_3702 NONE
    AM1_3701 3758031 .. 3758055 - -10.7  -3.73224   GCAGCGTTCATCAAA          CGTCTGAGTAC CGT GGACCCAGACG          ATATCGTCTATGCGG  81 523
    AM1_3699 3756858 .. 3756873 -  -4.6  -4.81082   AATGAACGAATAAAA              GCCAGC AAAG GCTTGC               GAGCCTCTTTCCTCA  74 128
    AM1_3691 3738880 .. 3738890 -  -3.2  -3.63515   GCTGAGCTTCAAGAA                 CCTG GAA CAGA                 TCGGGCACTGGCTCG  53 291
    AM1_3684 3735650 .. 3735681 -  -2.3  -5.28176   TTCAGTGATAAAAAA      CCCCAATCACA TTACAATCTG CGCGATTGGGA       CTATGCCATGGCCTC  75 105
    AM1_3682 3735046 .. 3735066 - -12.6  -3.11634   CCTCAGAGGATTTAA            CCCCTGAC TACAT GTCAGGGG            TTTCTTTATTGAAAT  84 51
    AM1_3679 NONE
    AM1_3678 NONE
    AM1_3677 3731296 .. 3731308 -  -9.1  -2.57564   CGAGCGTCTCAGAAC                CAGGC CAC GCCTG                CTGCTACCTTGGCCC  63 262
    AM1_3675 NONE
        chlM NONE
    AM1_3673 3728860 .. 3728871 -  -4.4   -3.1634   GGTGAAACCAGTCAA                TCTG AAGA CAGA                 GGGTCAGCCCAGGTG  49 10
    AM1_3672 3727706 .. 3727722 -  -2.1  -3.53343   AAGGTCGCCTCCAAA              CCTTGCC CAT GGCTATG              GGAATGCTGCGGCAG  47 143
    AM1_3670 3725795 .. 3725809 -  -5.6  -3.63073   TACAGCTGCCAATAA               CTGGGG AAG CCCTAG               GCCACTTTCTTGAAT  61 22
    AM1_3669 3724853 .. 3724872 - -13.6   -4.4078   TTGCGCTAATCAAAA            GAGGCGCT GTAC AGCGCCTC             TTTTGATTCTAAATA 100 66
    AM1_3666 3722549 .. 3722563 -    -5  -3.86835   GGAAACAGGAGCAAA               CCCTAA GAC TTAGAG               GCAAGCCTTATACAT  59 33
        holA 3719141 .. 3719165 -  -9.3  -3.09018   GCACGATGCTAAAAG          CAACACCCACC CCA AACGGGTGTTG          ATAAGAGGTTTGAAC  72 213
    AM1_3662 NONE
    AM1_3661 NONE
    AM1_3660 NONE
    AM1_3659 NONE
    AM1_3658 3714050 .. 3714063 -  -4.5  -3.57263   ACCCCCACTCCTAAA               GCTGC GTCC ACAGC                GCCATCGACGCCATC  55 378
    AM1_3656 3712407 .. 3712456 -  -7.7  -3.14931   CCCATTGTTTACCAA GCATCCCGTCTTTTCACCTGCCA ACGG TGGCTGGTCCAACGTCGGTATGC TCAATAGCGAACTCA  62 302
    AM1_3653 NONE
        lspA NONE
    AM1_3648 NONE
        ilvE 3702378 .. 3702391 -  -2.5  -3.65522   TAGGTATCTCAATAA               TTAAT AGGT ATTAA                AGCCAGGATGGACTA  50 63
    AM1_3645 3700297 .. 3700307 -  -5.4  -3.63782   GAATACTACGGCAAA                 GCTA ATA TAGC                 TTCCATAATTTGTTG  59 366
    AM1_3644 NONE
    AM1_3643 3698528 .. 3698541 -  -6.7  -3.31461   GACCGATGGTCAGAA               CCGTT GGAC AACGG                TAGGGGTATCCACCA  59 191
    AM1_3640 NONE
    AM1_3639 3695262 .. 3695274 -    -2  -2.82775   CTTATATAAAAGCCA                TAGA TTGCT TCTA                AGACGTTTCCATGTT  41 23
    AM1_3638 3694072 .. 3694085 -  -3.1  -3.08991   AGCCCTCGAAGAAAT               GATTG GCGT CAACC                CAGCAGAGCCAGAAC  43 74
    AM1_3636 3691998 .. 3692019 - -13.1  -4.70659   GGCTATAGCGAAAAA           GCCTTGGTA GTTC TACCAAGGC            TGGTCAAGTATTAAG 100 95
    AM1_3634 3691193 .. 3691215 -  -2.7  -4.19276   CCAAAAGTTTGAAAA           TGTATAGAG CTATC CTCTACACC           TTAACTTAGGAAACT  57 84
    AM1_3633 NONE
        rplU NONE
        rpmA 3689811 .. 3689839 -  -6.8  -5.08178   ACAGATATACAAAAA        CAAGCTGCTA CAGAACAGT TAGCAGCTCG        TTTATTCAATGCTAA  88 65
    AM1_3630 NONE
    AM1_3629 NONE
    AM1_3628 3686585 .. 3686596 -    -3  -4.10164   GCAGGATTATAGAAA                CATA GTAG TATG                 CGTCAGATGCTGGAT  58 158
    AM1_3627 3686057 .. 3686084 -  -9.2   -4.8622   TTCTTTAACTAAAAA        GACGCTAGCATC CAGA AATTCTAGCGTC         TTTTTGTCAAGTATT 100 275
    AM1_3626 3682780 .. 3682796 -  -3.7  -2.62043   TCTAGAAGGAACTCA              TTGACTT AAT AAGTCTA              GGCAGATGCTCATTC  44 300
    AM1_3625 3681399 .. 3681414 -  -2.6  -2.52491   GAGAGACTGACGAAT              TCTAAA TGGA TCTAGA               GCAGTGTAATTTTAG  41 21
    AM1_3624 NONE
    AM1_3623 NONE
    AM1_3622 NONE
    AM1_3621 NONE
    AM1_3620 NONE
    AM1_3619 NONE
    AM1_3618 NONE
    AM1_3617 NONE
    AM1_3616 NONE
    AM1_3615 NONE
    AM1_3614 NONE
    AM1_3613 3668883 .. 3668893 -  -2.6  -4.58424   TATTATCATATAAAA                 TATT TGA AATA                 AAGATTTTTAAAACC  64 48
    AM1_3612 NONE
    AM1_3611 3666418 .. 3666456 -  -4.7  -2.56596   TTTTGTAGCAAGCTA   CTGAAGTAAGATTTTAT GTACT ATAAAGGCTTACTACAG   ATAAAACTATATAAT  47 7
    AM1_3610 3665414 .. 3665424 -    -4  -5.30155   CTATCAACGAAAAAA                 TTCA AAT TGAA                 GTTGATCCTGCTCGG  80 238
    AM1_3608 NONE
    AM1_3607 3661959 .. 3661983 -    -3  -3.24021   TTTCTAAAGAGCTAA         GGCTGTTCCAAG TGA CTT-GAA-AGCC         CTGAAAACCCGATAG  47 160
    AM1_3606 NONE
    AM1_3605 3659943 .. 3659965 - -10.6  -3.39803   TATCGATAGTGATAA           GGATCACGCA GAC TTCGTGATCC           ACATCCTGCCTGGAC  78 181
    AM1_3604 3658813 .. 3658827 -  -2.1  -4.86731   GCCCTTGAAACAAAA               CGCAA GTCTA TTGCA               ATAAAACGACAAATT  66 48
    AM1_3603 NONE
        ubiA 3656948 .. 3656958 -  -8.2  -3.13906   CGCAAGCCAAAATTA                 GCCC TGT GGGC                 GACAGTAGGAACTGC  64 258
        thiG 3654781 .. 3654795 -  -2.8  -4.08767   GCTAGTCGCGGAAAA               GAGAAA CTT CTTCCC               TAGCTAGAAATTCGA  57 25
    AM1_3598 3654284 .. 3654295 -  -3.6  -3.37091   ATTCTCAAAACGTAA                GCAG GCTA CCGC                 TGCTCAGCCCTAATC  49 152
    AM1_3597 3652984 .. 3653008 -  -4.3  -2.90496   GCTGTGCCGAAATGA          CGATAGGTAGA CTG TGTACCTATTG          AATTAATAGGTGCGT  47 68
    AM1_3596 3651273 .. 3651303 -  -5.3  -2.72144   TGACCTGCCTCAAAT       CTGCGCGCCAACC CTAGT GATCGGCGCTGAG       CAAGATTGGATTTGC  48 211
        hisD 3637921 .. 3637943 -  -3.4  -2.78996   TATCGGGACTGAAAT           TGGCTCCC TTTATCG GGAAACCA           GTCGACGCTATTTGA  43 504
    AM1_3585 NONE
        phoE NONE
         pyr 3630087 .. 3630097 -  -3.2  -3.27676   ATTGATGCAAATACA                 CATG GTT CACG                 CCCTCATCGAATTGG  47 89
    AM1_3581 3629640 .. 3629652 -  -3.3  -4.59773   TCTTATTGGCAAAAA                GGGCA GTA TGCTC                AAAGCCATTGGCACC  66 214
    AM1_3573 NONE
    AM1_3572 3621274 .. 3621285 -  -3.6  -3.72576   CGCGCCCGTAGCAAA                CAGC TGCA GCCG                 GATGAATACAGTACC  53 413
    AM1_3570 3618757 .. 3618771 -  -6.4  -2.86492   TGATATCCAGGAAAT               GGAATC AGA GACTCC               TTTGCTGTTGGCCGC  54 152
    AM1_3564 3606577 .. 3606603 -  -4.3  -3.09516   GTTGCCACGAGGTAA         CCTGCCAGGGC CCATC GCGTTGGCAAG         TGCATTTTTGATGGC  49 50
    AM1_3563 NONE
    AM1_3562 3603865 .. 3603889 -  -7.1  -2.77947   TAAGAATGCGGAAAT          CTATGCTGCCT GTC AGGCAGGATTG          GAGTAGACTGACTAG  59 143
    AM1_3561 3603168 .. 3603184 -  -5.1  -4.14739   CTACCGATGCTAAAA              CCGAACA GTT TTTTCGG              AACCATTATTTTGAG  66 215
    AM1_3559 NONE
    AM1_3556 3599824 .. 3599839 -  -2.4  -4.17425   AGAACTATTCCAAAA              CGGGAG CTTA CGCCCA               GAGCAAACTGGCCTG  57 416
    AM1_3553 NONE
    AM1_3552 NONE
    AM1_3551 3595269 .. 3595281 -  -4.8  -3.28888   AAGCAAAAGAGAAAT                CGGA GTAAG TCCG                TTGATCTTGAGGAGA  53 70
    AM1_3547 NONE
    AM1_3546 3589599 .. 3589616 -  -2.7  -3.97088   CTTCAGAAGAGCAAA             CGGTA TACAAGAC TACCG              ATGTATCTTTTCAGT  56 492
    AM1_3544 3587829 .. 3587839 -  -5.4  -3.26947   GAACTCCGACATTAA                 CTAC TAG GTAG                 TTGATCAGAGAACAG  55 217
    AM1_3543 3585925 .. 3585941 -  -2.9  -2.55267   AAATATTGGAACTTA              GACTTCC GAA GCAAGCC              CTAGGTATGCAGTGC  41 104
    AM1_3542 NONE
    AM1_3541 3583183 .. 3583206 - -11.8  -3.12395   GGGAGCATGCAAAAC          CCTTAGCCTG TTTA CAGACTAAGG           CTTATCTCTGAAGGA  86 484
    AM1_3540 3582085 .. 3582098 -  -3.8  -4.06179   GCGAAAATGCAGAAA               TGCG GTTTGG CGCA                TTTTCTGTGAACGAT  60 262
    AM1_3536 3576992 .. 3577008 -  -5.1  -5.04987   AAGATTTTGAAAAAA              CCAAGCA GGC TGCTCAG              CAAGTTCATTTTGTG  82 178
        amtB 3574297 .. 3574336 - -23.9  -2.87931   TGTAGTTTGGATATA  TTCACAAAACGCCCTGG ATTACA CCAGGGCGTTTTGTGAA   TATATGTTATTCAAG 100 83
        amtB 3572411 .. 3572449 - -20.5   -5.8901   ACACAAAACAAAAAA   CAATAGCCCCCAGCACT GGTGT AGTTCTGGGGGCTATTG   TTGATGAAAGATGAC 100 79
        gatA 3568310 .. 3568324 -    -5  -2.92246   TTAACCTTAATTAGA               CAAATC GTT GATCTG               CATGAAATGGCTGAT  49 343
    AM1_3529 3567194 .. 3567207 -  -2.4  -3.01712   CTCCCTTTGCCAAGA               GATG GTGACG CATC                TTCCTCAGCAGGTCT  42 379
    AM1_3525 3564758 .. 3564768 -  -5.4  -3.54771   CCTAGAAGATTAGAA                 TTGG AAC CCAA                 TTACTTTGTCTCAGC  57 26
    AM1_3523 NONE
    AM1_3522 NONE
    AM1_3521 3561714 .. 3561725 -  -7.2  -3.64703   GTGGTCTCAGTGAAA                GCCG CTAT CGGC                 AACTCGTGGGCAGCC  68 85
    AM1_3518 3559120 .. 3559130 -  -5.4  -3.16742   TTTAATTTTGAGGAA                 TAGC GCT GCTA                 GCTTCAGTGCTGTGA  53 1
    AM1_3512 NONE
    AM1_3511 3553653 .. 3553665 -  -7.7   -3.4252   GCTGAGCGATCATAA                GAGAG TCT CTCTC                AGTTATTAACGCTCT  68 298
    AM1_3507 3550098 .. 3550108 -  -8.2  -2.67747   TCGTCAGATTACAAC                 CGCC AAA GGCG                 TCATCGCACATCTAC  61 145
    AM1_3505 3545717 .. 3545727 -  -5.4  -4.66609   TACCGCAGTTAAAAA                 GTTG CGG CAAC                 AGGGCATGGAGCTGA  75 430
    AM1_3502 3543752 .. 3543763 -  -5.8  -3.83998   TGATTCGAGAGGAAA                CAGC AGAG GCTG                 TGGCAAGACAATCTG  64 219
    AM1_3501 3541843 .. 3541872 -  -4.9  -2.89564   TGGGTATTGGACAGA       TGGC-TGGGATGGC TAT GCCGCCTCACGCCA       ACGCATCTTGGATGT  47 435
    AM1_3497 NONE
    AM1_3496 3529176 .. 3529187 -  -4.4  -3.36803   GAATGTCAGTCATAA                TCAG CTGT CTGA                 TATTTCAGTTTTGCA  50 372
    AM1_3492 3525125 .. 3525141 - -12.3  -2.75819   GACATAGGCTCAAAG              TCCCCCA GAA TGGGGGA              TTTAGGGGGCGAGTG  89 101
    AM1_3491 NONE
        pstC NONE
        pstA NONE
        pstB NONE
    AM1_3487 3520102 .. 3520122 -  -5.3   -4.0896   AAACTCGCGGGAAAA            GTTGGGGTG TCT CAGCCCAGC            CTGTAATGGCGATCT  65 277
    AM1_3486 3519259 .. 3519272 -  -3.8  -3.73068   TTTTTAACCCAAGAA               GTCG GGATTT CGAC                AGAGTCGATCAATAT  55 496
    AM1_3477 3511882 .. 3511898 -  -5.9  -3.00601   GAAAGGACAACGATA              CAAAACG CTA CATTTTG              GCTTGACGTTGCTTT  53 168
    AM1_3475 3510456 .. 3510469 -  -2.3  -2.70932   GGCGTTGCTCAATGA               CGGGA TGAC TCACG                CAGGAATAGGTACTT  40 21
    AM1_3470 3505048 .. 3505062 -  -8.6  -2.54314   GACATAGAAGAAATC               CAAGTG TAA CACTTG               TTTTTAGCAGGACTA  63 128
    AM1_3469 3504381 .. 3504401 -  -6.9  -3.26319   AATGTTCCATAGCAA            GGGAAAG GACATCT CTTTCCC            TTCATCCATAGGCTG  61 152
    AM1_3468 3502116 .. 3502132 -  -6.6   -3.5944   AGGCAGATTCTGAAA              GTTTGC TCATT GCAAAC              GTGGCATAAAGCCAA  65 121
    AM1_3467 NONE
    AM1_3466 NONE
    AM1_3465 3498831 .. 3498849 -    -6   -4.1196   AAGCGACCTGGAAAA             TTGTGTTG GGA CACCACAA             TATCTATTCTTCAGG  66 432
    AM1_3462 3496728 .. 3496742 -  -4.2  -2.59668   TAATACTCGCATAAG               CGTTAC AAG GAAACG               GTTGAAATCAAAGGA  45 13
    AM1_3461 3495809 .. 3495819 -  -4.6  -4.59853   TGAATCCGGCAAAAA                 GCGC TGG GCAC                 TGGTGGGAAGTTCGC  71 235
    AM1_3458 NONE
    AM1_3457 3492134 .. 3492155 -  -2.3  -2.59927   AAGGCTGACAACCTA           CCCTTTGAT CTCA ATTAAAGAG            AACGCTGGATTCCCA  40 18
    AM1_3456 NONE
    AM1_3455 NONE
    AM1_3454 3485150 .. 3485164 -  -2.8  -3.36518   GGAAAATTGGGAGAA               CAAAGC TGA GATTTG               GCTCGACCAATTGAT  47 91
         asd 3475612 .. 3475630 -    -3  -3.13728   AGTATTCATAGTTAA             GGCAGCGT AAA AAGCTGCG             TGGATGCTTTTAGAA  46 161
        dapA NONE
    AM1_3444 3472734 .. 3472774 -  -9.2   -3.9122   TATCGTCGTAAATAA CT-GCCTAGGCTGAGTC-AT AAG ATGGACTCGGCCTAAGCCAG GTCCTCCAAAACTTA  83 38
    AM1_3440 3469881 .. 3469905 -  -3.5  -3.72324   CATTGGCAGGAAGAA          CAGCCTCAACT TCA AGTTCAAGCAG          AGTGGACCCTCGTTG  53 396
        glmM 3463979 .. 3463989 -  -6.8  -4.11484   CGGAATTGCTGAAAA                 TGCC AGC GGCA                 GAATTTATGCGCACC  68 460
    AM1_3433 3462119 .. 3462131 -  -4.9  -4.63486   ACGTTTCTAAGAAAA                GTTAA GGT TTAAC                CTGGCCAAAATTGCT  71 80
    AM1_3431 3461127 .. 3461150 -  -3.8  -4.06281   AGCGCAAAGAAAAGA          CGCAGGATCA TGCT CAATTCTGCG           ATCTGCACTTGCCCC  60 373
        rpsB 3458322 .. 3458355 -    -4  -2.56761   TAAAACGTTAAGGGA     CATCTAAGAG-CG AACAGTAGG CGTCCCTTAGATG     TCCAGCAGGGTTCTA  45 38
         tsf 3457508 .. 3457539 - -17.6  -3.58533   CTATAATCGCTTAAA      CTAAAAAGGTAGAC CTTG GTCTACCTTTTTAG       TTTGTTTACTTCTTC 100 31
    AM1_3426 3456535 .. 3456548 -  -3.1  -3.53811   TCGATTTTGCTGAAA               CG-GAC CTG GTCGCG               TTTATTCGCTGACTT  49 27
    AM1_3425 3454812 .. 3454837 -  -4.1  -3.01422   CATGCCGAGAAATTA         GCGAATCTCTCA GCC CGAAAGATT-GC         AACTGGCTTTGAACC  47 442
    AM1_3422 3453232 .. 3453280 -  -7.6  -4.79752   CTGAATAAGAGAAAA TTCAGGCTAATGCTG-GCTTGAGA AGC TCTCTTGCTCAGG-TTAGCCTGAA TTTATAGTTGTTATC  91 85
    AM1_3421 NONE
    AM1_3412 3443233 .. 3443244 -  -4.4  -3.03159   CTAATCCTGTGAAGA                CTCA CAAC TGAG                 ACCCTGATACAGCAA  47 15
    AM1_3411 NONE
    AM1_3410 3441606 .. 3441620 -  -5.7  -3.35934   CCAGATAGCTGACAA               TCCAG TCTTG CTGGA               TCGGTCTGCTACTGA  57 506
    AM1_3408 NONE
    AM1_3407 NONE
    AM1_3406 3437793 .. 3437807 -  -5.7  -2.83345   TTTAGAGAGTAAGCA               GACAC GTTTT GTGTC               ACTAGGAAATATGGC  53 55
    AM1_3403 NONE
    AM1_3402 NONE
    AM1_3401 NONE
    AM1_3400 NONE
    AM1_3399 3429280 .. 3429309 -  -9.3  -2.64616   TTTTCAGTTAGATTA       CTGGGGCACAACA GAAT TTTTGCGCCCCAA        ACGCATTATTTAGCT  68 35
    AM1_3398 NONE
    AM1_3397 3425483 .. 3425497 -  -4.3   -2.5547   AGCCTTGATACTAAG               TGAGA TTTAT TCTCA               TTTAAGTACAGCTTA  45 125
    AM1_3396 3424139 .. 3424149 -  -5.4   -3.6869   CAGATGAACGTGAAA                 TTGC CAT GCAA                 CGTATCGCTCATCTG  59 326
    AM1_3394 3423602 .. 3423619 -  -6.9  -3.24924   GCCTTACCCACAACA             GCCAGGC CACA GCCTTGC              TAATGAAAATTAGTT  61 48
    AM1_3393 NONE
    AM1_3392 NONE
    AM1_3391 3419141 .. 3419151 -  -2.4  -3.70478   AGAAAGGTATGCAAA                 GGGG AAG CTCC                 TGATCACAGGCTCCG  49 204
    AM1_3390 3417755 .. 3417765 -  -2.6  -3.09844   TGCATAGTTGAAAAG                 TATT CTC AATA                 ATTTTGTGATGGCAC  44 125
    AM1_3389 NONE
    AM1_3388 3416714 .. 3416739 -  -9.9  -2.71011   ACTTGTCTGCAAGCA         CAAATCAGGATC CTA GA-CCTGATTTG         TGCTTGCACCGATTA  71 38
    AM1_3380 3409480 .. 3409500 -  -8.3  -3.76413   GGGCAAAACTCTAAA            TAACGATGG AGA CCACCGTCA            TTGCTAACAACGGTG  75 0
    AM1_3377 NONE
    AM1_3376 NONE
    AM1_3375 NONE
    AM1_3371 NONE
    AM1_3370 3402081 .. 3402099 - -10.4  -2.59837   AGCTGAAATGAATAC             GTATGACA GCT TGTCATAC             TTAAACAGTAGCATC  74 73
        petE 3401541 .. 3401579 - -10.3  -4.06419   GCGCTTGATAAAGAA   TACCCGCAGAGTCTTCC ATTCA GTAGGATTCTGCGGGTA   AAAGCTTATGAATTG  89 97
    AM1_3368 NONE
    AM1_3367 NONE
    AM1_3365 3400391 .. 3400401 -  -3.2  -3.58365   CAGTAGATGAGACAA                 CTCC CAT GGAA                 TCTACCGAGTCAGTG  50 86
    AM1_3361 3395029 .. 3395043 -  -3.6  -3.18274   TCCAGTCTAATGTAA               TAAGAA TAA TTCCTA               TTTATCAAAATAGAT  48 69
    AM1_3360 3393950 .. 3393961 -    -3  -4.49337   TTAGAAGTCAGAAAA                TCAA GGTA TTGA                 TAGTTGCCTTTTCAA  63 59
    AM1_3358 NONE
    AM1_3357 3389468 .. 3389484 -    -3  -3.02144   GTACTGTTGCCAAGA             CGGT-AG CGCT CTCACCG              ACCCGAACCCATGGA  43 504
    AM1_3353 NONE
    AM1_3352 3386178 .. 3386190 -  -4.8  -3.46117   ATCAGACCAGCACAA                GACG TTTCC CGTC                GACTTAGAGCTAACC  55 166
    AM1_3350 NONE
        fhuG NONE
    AM1_3348 3380690 .. 3380716 -  -3.7  -2.53004   AATGAAACCCAACAG        TCCCTAGCGGCA ATGG TGAC-CCAGGGA         GATATGAGTCAAACC  42 409
    AM1_3346 3379422 .. 3379438 -  -5.1  -3.95071   GAAAGTTTGAAACAA              TGATCAC TCA GGGATCA              TACTAACAATTTTGG  63 12
    AM1_3345 3377400 .. 3377417 -  -5.5  -4.12397   CGATAGAACTATAAA             GCAGGCT ATCT AGCCTTC              TAGCCTGTTAGACCC  65 58
        xseA NONE
    AM1_3343 3375753 .. 3375766 -  -3.1  -3.29511   TTCATGGCGTTACAA               GATCA TCTA TGACC                TCCAATTGTGCCCTA  47 124
    AM1_3342 3374042 .. 3374073 -  -9.6   -3.1944   AGCAAAATTAGGGAA      GGATAGTTATCCCC AGTG AAGAATAACTATCC       CTGAGTGCAAGTGAG  72 252
    AM1_3340 NONE
    AM1_3339 NONE
    AM1_3338 NONE
    AM1_3337 3370701 .. 3370713 -  -4.8  -4.17048   CGGTTTTGAAAAGAA                CAGG ATTTG CCTG                GGCAACGCGACGATT  63 81
    AM1_3331 NONE
    AM1_3329 3364381 .. 3364392 -  -2.2  -3.16881   TATCTATCTGATTAA                TGAG CTTG CCCA                 TAAGCGGGGCATGAA  43 166
    AM1_3328 3360853 .. 3360867 -  -2.1   -3.2534   ACCATCAGAACTTAA               TAACG GTCGA CGCTA               GATAAGAAAACAGGT  45 7
    AM1_3327 3359537 .. 3359558 -  -2.2  -3.37975   ACGGATTACTGAGAA           GCATATCG AGGTGG CGATTCGC            CTGACCCGCAATTGT  45 118
    AM1_3320 3351421 .. 3351432 -  -4.4  -3.89607   GATGATAAAAATGAA                CGAT TTGG ATCG                 ATTTATCACTAATTT  57 34
    AM1_3319 NONE
    AM1_3318 3350190 .. 3350204 -  -4.3  -3.91434   AAAGCACCTGACAAA               TCAAC TGTGT GTTGA               TGCTAAGTACTCCTA  59 75
    AM1_3317 3348531 .. 3348551 -  -2.4  -4.18197   ACCTTTTACGGAAAA            GTCGGCTG CAACC CAGCAGGC            TGAAGATTGGGTCAC  57 228
        pykF 3346259 .. 3346272 -  -3.1  -3.14463   AATGGTGTTCATGAA               CTCAA AGCA TCGAG                TGGGTAGGATGCGAC  46 90
    AM1_3314 NONE
    AM1_3313 NONE
    AM1_3312 NONE
    AM1_3311 3342645 .. 3342657 -  -7.7  -2.77899   TCCGGTGATGAAGTA                GGCAA GGT TTGCC                TAAAAATATGCTGAG  61 361
    AM1_3309 3340559 .. 3340569 -  -5.4  -2.71765   ACAGCCTAAATCAAT                 TCTG GGT CAGA                 CATGATTTCTACGAG  49 5
    AM1_3308 3339678 .. 3339719 -  -9.5  -2.78032   TTGTTCTCAAAATAT TCGGTCGTCAAGCATAGCAA TGG CTG-TGTGCCTGACGACCGG CATTAGCTCTATCGT  70 34
    AM1_3306 3337809 .. 3337825 -    -3  -2.78996   CAGGTCTATCTAAAC             CTGGAGG CGAA CCTC-AG              TCACGCCCTGTCTGA  43 3
    AM1_3305 3336868 .. 3336882 -  -2.8  -2.50994   GCGAATCTCAGCAAT               GCCAAT CTG ATCGAC               GCCGATCTTTTGGAT  40 154
    AM1_3292 3322858 .. 3322873 -  -6.8  -3.32844   GGGTTCAGGTCACAA              GGCCAG CATA CTAGCC               TTTGCTATTCTGCCT  61 90
    AM1_3291 NONE
    AM1_3290 3321170 .. 3321186 -  -3.6   -4.2558   CACGTTCTACCAAAA              TCCCGG TGCTT CAGGGA              GGGGTTGTTGTAAGG  63 0
    AM1_3289 3320387 .. 3320399 -  -3.3  -2.64045   TTATCTTAACAAGAT                CGGCT AGT AGCCC                TTTGGAGCAGTAGGG  42 77
    AM1_3288 3319913 .. 3319924 -  -4.4  -3.42283   CAACTGATTGAAAGA                TAGC TATG GCTA                 GGCACCGCAAACACA  52 74
    AM1_3287 NONE
    AM1_3286 3318582 .. 3318594 -  -3.3  -3.06133   CAAGTGGTGACTGAA                GGGGT AGA AACCC                TAGAGCAATTGCAGA  45 232
    AM1_3279 3312812 .. 3312823 -    -3  -3.21993   ACGTAGAATAGCCAA                CAAT CAGC ATTG                 CGTAAAAGCTATACC  46 34
    AM1_3278 3312535 .. 3312548 -  -2.4  -3.57462   GACGTGAGGTCTAAA               TGAG TCATAG CTCA                TAATCTCCGTTTGGA  49 16
    AM1_3277 NONE
    AM1_3276 NONE
    AM1_3275 3310963 .. 3310979 -  -3.7   -3.8647   AGGTATTAGATGAAA              TGATCTA ACT TAGCTCA              TTAGCAAGTGTTGTA  56 110
    AM1_3274 3309900 .. 3309913 -  -4.5  -3.13522   ATGTTGGTATGAATA               GTGAG TGCT CCCAC                GGTGTTGGTTCAGTA  51 242
    AM1_3273 3309573 .. 3309587 -  -7.2  -2.81312   AAGCGATGGACCAGA               CCAATT CTG AATTGG               AAGGCGGCGCTGTCC  59 174
    AM1_3269 3305059 .. 3305075 -    -8  -2.58249   TACATCTCCTACAAG              CGAGTG TGCAG CACTCG              GTATTTGAGTAACAA  60 477
    AM1_3267 3300916 .. 3300936 -  -5.4  -3.17486   AAGAATTCGGATTAA            TCAGGGAC AGTCA GCCCCTAA            CGCTTCTTGACTTTC  53 5
    AM1_3266 3298872 .. 3298887 -    -4  -2.94298   GGATTAAAAAAGCTA              CA-CCGA TGA TCGGATG              ATACCAAAGCAGTCT  47 187
    AM1_3265 NONE
    AM1_3264 3297261 .. 3297272 -    -3  -3.29511   GTGATGTTCCTAGAA                CTAA CAGG TTAG                 ATGATGGATTCAACA  47 22
    AM1_3263 NONE
    AM1_3261 3295761 .. 3295785 -  -2.1  -2.93182   GACCCAAAAAATTTA          TTATCCAAGTG ACT CCCTTGAATGA          ATGGTCTCTCCCCAT  42 120
    AM1_3259 3291387 .. 3291397 -  -3.2  -3.64049   GGAAGAATGCCGAAA                 GTAG CCA CCAC                 TACACATGAATTATT  51 513
    AM1_3256 3290501 .. 3290513 -  -6.3   -3.6512   TAAATAACCTCCAAA                TGTTC TCT GAACA                CGCGCTTGGTTGGGT  63 224
    AM1_3255 NONE
    AM1_3254 3286830 .. 3286846 -  -3.7  -4.40358   AGTTACCCCAGAAAA              TTATCCA GAT TGGAAAA              TGCTTGGAGACATGC  63 383
    AM1_3252 3286154 .. 3286164 -    -4  -3.51232   CTGCGTTTAAATGAA                 TGAT GCG ATCA                 TCTATCGAACAACCC  52 23
    AM1_3250 NONE
    AM1_3249 3284146 .. 3284157 -  -4.4  -3.12668   TATCTGGATACCCAA                CAAC AACT GTTG                 AGCCCCGAAATGGTG  48 144
    AM1_3247 3282479 .. 3282503 -  -5.1  -3.19371   AGTCATTGAATTGAA          CGAAAAATACA CTT CGTATTTCTCA          AGAATATGGAGATTA  53 129
    AM1_3246 3281329 .. 3281346 -  -3.5   -3.5399   AGGAGACGGAGACAA             TTTG-GCA AAT TGCTCAAA             CTAAAACAATCTCTG  50 233
        dsbA 3279080 .. 3279090 -  -3.2  -3.17486   AAGAACTGCTAGCAA                 GACT GCG AGCC                 TTACATTTCTTGATC  46 193
    AM1_3240 NONE
    AM1_3239 3277621 .. 3277649 - -10.4  -3.16492   TGAGATCGACGAACA       CGGTTGACACTGCC ACA GGCAGTG-C-ACCG       GGAGGACATGCCTAT  73 118
    AM1_3231 3270676 .. 3270690 -    -5  -2.91144   TGATCTTTCAAACTA               CTTTAG TAT CCAAAG               ACAGACAACGTTGAA  50 154
    AM1_3230 3269540 .. 3269550 -  -3.2  -3.36505   ATAGCGGATTTATAA                 GCTG GCT CAAC                 TGGATAACAATGCAT  47 433
    AM1_3227 3267859 .. 3267875 -    -5   -3.1505   AGCATTGGCTAGGAA              GCCCAG AAATG CAGGGC              TGGGGATTCGTTCAG  50 334
    AM1_3226 3266408 .. 3266418 -    -4  -3.05816   GGATTTTCGAGTGAA                 TAAC TGC GTTA                 AGACGGTTTTTGGTA  47 23
    AM1_3225 NONE
    AM1_3224 3264139 .. 3264156 -  -6.3  -3.66654   GATTTGAATGTGAAA             GAGCTGA GGAC TCAACTC              CATACCCTCAGTAAA  63 335
    AM1_3222 3260350 .. 3260362 -  -4.7  -3.17688   TAACCATGGTATGAA                CGCGG AGC CAGCG                AACTCGCGTTTTGAA  51 136
    AM1_3218 NONE
    AM1_3217 3255619 .. 3255648 - -12.9  -4.26076   TCAGCTCCATTAAAA       GCCCCCCAAAAGA CCAG CCTTTTGGGGGGG        ATCGGTAGCTTGATT 100 99
    AM1_3216 3254864 .. 3254898 - -10.1  -4.67353   TGAGTTACTTAAAAA     GCAATGCCCTCGATT TAGCT AATCGAGGGCATTTT     TGTGATGGATAGACT 100 135
    AM1_3211 3248296 .. 3248309 -  -5.3  -4.01135   CCCAACAAGATGAAA               TTGCT GCCG AGCAA                AATTTTCGAGCATTG  64 73
        nirB 3245334 .. 3245366 -  -2.6  -3.47157   TCAAGAAAAAACAAG      GGGATACAGCTGTG GTCGT CATGTCTGCATCCC      TGTCGCAAGGTTGAG  48 44
        nirD 3244800 .. 3244810 -  -3.2  -3.20382   TCCTATATCTATCAA                 GACT TGT AGCC                 TTTTCCTGACTTCTT  46 142
    AM1_3206 3243142 .. 3243155 -  -5.3  -3.84648   CTCAACAGGATGAAA               TTGCT GCGG AGCAA                GCGTTCCGAGCATGG  61 251
    AM1_3195 3233752 .. 3233765 -  -8.1  -3.79113   AGTTTCGTATAACAA               TGGCG GGGA CGCCA                AAAAATGGGTGTGGA  72 61
    AM1_3194 3230261 .. 3230275 -   -10  -2.82407   AACAGAAGTGTAAAT               CTCTGC TGA GCAGAG               TATGGGCCAAGATTT  72 497
    AM1_3190 3227701 .. 3227734 -  -5.3  -2.54896   GCCCCACGGAACTTA     GCC-CTGGCGTATC GCCCACT GATACACCTGAGGC     ATCATCCAGCCCGAC  48 434
        cyaA 3224327 .. 3224340 -  -5.3  -4.59919   AAAGCAGAAAAAGAA               TGACT CTTT AGTCA                GATTGGATATTTCAA  73 282
    AM1_3188 NONE
    AM1_3187 NONE
    AM1_3186 3217000 .. 3217022 - -14.2  -6.02919   GTATAAATAAAAAAA           CTGCTCTGGC ATA ACCAGAGCAG           TTTTCGTTTTAAGCC 100 69
    AM1_3185 3215900 .. 3215914 -  -8.6  -3.29947   TAGCCATTACAGTAA               GCTTGA GAG TCAAGC               TAAATTGGTATAAGA  69 128
    AM1_3184 3215550 .. 3215571 - -10.9  -5.30616   TGAGTCAAATAAAAA           CCCTAACGA AATA CCGTTAGGG            CCAAGAGATCGATAT 100 75
    AM1_3179 3209450 .. 3209467 -  -4.1  -3.12595   GTGAATGACCTAACA             GCGGATA ACTT TATCCTC              TAAGTAAGTTAGCGG  49 18
    AM1_3178 3204437 .. 3204457 -  -3.2  -4.20084   AGGATCGACGCAAAA           CCGTGATGC GATC GCGTC-CGG            TAATCAACGTCATGA  60 439
    AM1_3176 3202974 .. 3202997 -  -5.3  -5.25735   TGAAAAAATGAAAAA          GACATCAGT GGTTAA ACTGGTGTC           TTTTGTAGTTGAAGC  84 331
    AM1_3170 3199566 .. 3199577 -  -5.8  -3.13403   GGGGTGGGATGAATA                CCTG TGAT CAGG                 CTGGCTGTGAGAACA  55 21
    AM1_3167 3196228 .. 3196251 -  -7.4  -3.92869   AATAGAGAGACCAAA          GC-TGCAGGCC TGA GGTCTGCAAGC          TTCGAAGGCAGCAGT  72 164
    AM1_3165 3195700 .. 3195718 -  -7.4    -3.794   CTGCAAGCTATCAAA             GCAGCTCT AAG AGAGGTGC             GAGGTGAAGTGGGTG  69 123
    AM1_3164 3193852 .. 3193874 -  -4.8  -3.28712   TCGCTTTTTTTAGAA           CTCCTCCCAT GGA ATAGGAAGTG           TGGGTGAGCAGTGGA  53 55
        glyQ NONE
    AM1_3162 3191639 .. 3191649 -  -4.6  -2.56095   CCTAGACGTAACTTA                 GCCA AGA CGGC                 CATAATGCTGATCGA  47 43
    AM1_3161 3191098 .. 3191141 -   -14   -2.6155   GTTCCCAACATGAAT GTACTCGGCCCTGCAGTA AATCATCA TACTGTAGAGCCGAGCAC GGTCGCATAAAATCG  95 138
    AM1_3159 3190020 .. 3190034 -  -3.5  -4.59109   GATATTGCCTAAAAA               CTCAG TCGGG CCGAG               AGTTACATGCCCGCT  66 104
        glnB 3188113 .. 3188130 -  -5.6  -2.67803   GGTGCATTAAAGGCA             CGTCTA TCAGGC TAGACG              GCTTCAAAATCCTTT  52 19
        aroE 3187002 .. 3187028 - -12.4  -4.46073   CGCCAACATAAGAAA         TAACCTCATGCA ATT TGCATGAGGTTG         TCATAACTAACTATT 100 180
    AM1_3156 3185308 .. 3185324 -  -5.1  -4.03888   CATTCATAAGAAGAA              GATCACG GTT CACGATC              CGGTAATGCTCGGTC  64 73
    AM1_3154 3183518 .. 3183528 -  -3.2  -3.08312   AAGTGACCTATTTAA                 TGGA TGA CCCA                 GGCTTTACATGCCCA  46 30
    AM1_3153 3181619 .. 3181636 -  -8.5  -2.97747   TCTTGAGATGATATA             TGACCAA TCGT TTGGTCA              TTGCTAACTACCATA  65 346
    AM1_3152 3179050 .. 3179060 -  -4.6  -4.40561   GTCTTGCAAAAAGAA                 GCCA TCT CGGC                 TTGGCGCGAAGGGGG  67 186
    AM1_3150 NONE
    AM1_3148 NONE
    AM1_3146 3175747 .. 3175757 -  -6.8   -3.6682   CCCTATGCACTTAAA                 GTCG CAG CGAC                 CAATGTTACATCTTT  63 435
    AM1_3145 3172294 .. 3172326 - -10.2  -4.40561   TTTTTCTAAAAATAA     GTTTAAAAAGCAACA TATA TGTTGCTTTTT-AAC      TATCAGAAGATGCTT 100 46
    AM1_3144 3170624 .. 3170654 -  -9.8  -3.17219   GAGAAGTGGGAGCAA       CCAAAACCTCTCTA TAA CAAAGGGGTTTTGG       CAAAGTATGCCAAGT  70 162
    AM1_3142 3168777 .. 3168798 -  -2.3  -3.66961   AGAGAAAAAAAATGA           CTTTTTCAGC ATA GCTGGAAA-G           AAAGTGAATCTTGGC  49 87
        lepB NONE
        lepB 3167015 .. 3167037 -  -2.7  -3.64236   ACTCAAAGGGCTAAA          CGGTCTGACA GAAC TGTT-GACCG           TGGACAGTGCCGGAC  51 373
    AM1_3136 NONE
    AM1_3135 3164076 .. 3164090 -    -5  -3.15197   CAACAAACCGGAACA               TCAGCT GGT AACTGA               CATACAAGTTGGATT  51 41
    AM1_3133 3163038 .. 3163048 -  -3.2  -3.55946   TCAGTGGAAAGAAGA                 CACC ACC GGTA                 ATATTGACCGAGCCA  50 65
    AM1_3132 3161769 .. 3161782 -  -3.1   -4.1299   GCCAAAAAAAATTAA               CTGCT CTCC AGCAA                GGACATTGCCGCTTC  58 8
    AM1_3131 NONE
    AM1_3130 3160261 .. 3160282 -  -9.5  -3.06261   GGCCAACCCCGAAGA           GAGAAGTAG ACTG CCACTTCTC            TCTTCGGGGTTGCAG  71 50
        dacB 3156940 .. 3156950 -  -3.2  -2.96274   TTTCCTACAATTATA                 TGGA GTA CCCA                 CCATTTTGTTTCTGA  45 157
    AM1_3123 NONE
    AM1_3119 3147587 .. 3147620 - -18.3  -4.13945   ATGTTTATCGTAAAA     GAGAGGCGCAGTG ATCAATTA CACTGCGCCTCTC      TTTTGAATATTTTAT 100 60
        wecB NONE
    AM1_3117 3145539 .. 3145549 -  -5.4  -4.10657   TGATAGTCCTTAAAA                 CTTC AAA GAAG                 ATTTCTCTCTAAACG  65 34
        gyrA 3141585 .. 3141601 -  -2.1  -3.00498   CACAGGCGATAGACA              GTAGTGC CAT GCCCAAC              AATATCCACACGAAA  42 140
    AM1_3112 NONE
    AM1_3111 3139977 .. 3139992 -  -6.1  -3.55203   AAAAGTGTTTTGAAA              CGAGC TTTCTG GCTCG               ATCTGGGCTGGCGAT  59 105
    AM1_3108 3137442 .. 3137455 -  -2.4  -3.12606   TGACATATCAGCTAA               GTGT TTTTCG ACAC                GGTATGGAAGTGCTG  43 180
        fabG 3135926 .. 3135941 -  -5.4  -2.85874   TAAACAGATTAAGCA              TTCCCG TATA CAGGAA               TAGCGGCACCTCTAA  50 3
    AM1_3104 3134950 .. 3134985 -  -9.2  -2.91264   GTCTCGACTGAGATA    CAAACATTGATATTTG TAAA CTATTATCAATGTTTG     TATCATACCCTGATT  71 55
    AM1_3103 NONE
    AM1_3102 NONE
    AM1_3100 3131424 .. 3131434 -  -5.4    -3.254   GACCCAGCGAGAACA                 GCAA GTG TTGC                 GATTGCTGATGGAAG  52 201
    AM1_3099 3129859 .. 3129874 -  -3.2  -3.08173   ACGAACGGGATTGAA              CCTAGT GGGT ACGAGG               CAGGGATGATGCCTG  46 11
    AM1_3098 3127697 .. 3127755 - -20.9  -2.91924   CCACTCCTGATAAAT TGCATCTATAAAAATATCCCCCGCAA TCTAACTG TTGCGGAGGATATTTTTATAGATGC- CCTATGAGGGATAGG 100 27
        rnpA NONE
    AM1_3093 3122859 .. 3122881 -  -6.4  -3.72695   ACTGTGTCCAGGAAA           TATAAAAGCT TCT AGCCTTTACA           AGCATGATTTTACTG  63 181
        oxaA NONE
    AM1_3091 NONE
    AM1_3090 3120014 .. 3120032 -  -4.6  -2.79133   TAATCCGTCATGATA             GAGAAG CAGTGCC CTTCTC             CCGCCATGACTTCCT  49 498
         hli 3118431 .. 3118448 -  -8.4   -3.8381   ATACATAGCATTAAA             CCCCTG ACAAAG CAGGGG              TTTATATCGTTAGGC  75 51
    AM1_3086 3116806 .. 3116826 -  -2.5  -3.17526   CGATTAACGCAAAAG            CTCCGGT TGCACGC ACAGGAG            AACCTCACACTCAGA  44 167
        ilvB NONE
    AM1_3084 3114540 .. 3114570 -  -4.1  -3.01915   GTCTTATAAAAACAT       TCCGCCAAT CTAAGCAATATCC ATTGGCGGA       GAAGGTTGATTTTGT  47 4
         dam NONE
    AM1_3078 NONE
    AM1_3077 3107465 .. 3107496 -  -8.1  -5.24647   ATACATAAAAGAAAA      GAGCCGATTGC AGAAAAATTA GCAATCAGCTC       TAAAAGGTGTGAGGT  95 69
    AM1_3075 3098754 .. 3098773 -  -3.4  -3.35073   ATTACCCTGAATGAA            CCTCTTGC AGTT GCACGCGG             TGTATCCGTCTCATT  48 471
    AM1_3069 NONE
    AM1_3068 3092637 .. 3092655 -  -3.1  -4.13343   AGAAACTCTTCAAAA             GTACCTC ACCAG GATGTAC             TGGCATCAGCTTATC  58 209
    AM1_3067 3092304 .. 3092314 -    -4  -3.26811   GAAATATAGTAAAAC                 CAAA GGC TTTG                 CTGTGCAGAACTCCT  51 77
    AM1_3063 NONE
    AM1_3062 3085967 .. 3085987 -  -2.5   -3.1355   GTCATGGATAGCTAA            TCACTGTTC GTA GAAATGTGA            GTATGAGTCGAAATC  44 5
    AM1_3061 3082461 .. 3082477 -  -7.9  -2.56715   ATGCGGATGAACTCA              CACCGGA TAC CCCGGCG              ATGCAATTGTGCGAT  57 409
        thrS NONE
    AM1_3054 NONE
        hisI NONE
        ccmM 3074570 .. 3074584 -  -5.8   -4.1413   AAGATATTCTCAAAA               TGATAA TGA TTATCA               TTCTTTTTTGCAACC  68 190
    AM1_3051 3074050 .. 3074064 -  -4.2  -3.05384   TCCTGTGGGATGCAA               GGTAGA GGG TCAACC               CATTGAGTCATGGAA  47 59
    AM1_3050 3073801 .. 3073812 -  -4.4  -3.55824   CATCATGCATAAAGA                CCTA GATT TAGG                 GATGTGCCGAAGACG  52 137
    AM1_3049 NONE
    AM1_3048 NONE
    AM1_3047 3071242 .. 3071259 -  -8.5  -2.92475   GTGAGTTTGATAAAG             TCCAATG ACAC CATTGGA              AGCTTATTACAGCGG  63 214
    AM1_3045 3067621 .. 3067635 -  -7.2  -2.99546   TCAGAAAGCGATAGA               TTGAAG CCG CTTCAA               GAAAAAATGCAGGAG  59 230
    AM1_3043 NONE
    AM1_3041 3065502 .. 3065518 - -12.3  -3.54424   TTGCAGCCCCCTAAA              TCCCCCA TTC TGGGGGA              CTTTGAGCCTATAAT  86 143
    AM1_3040 NONE
    AM1_3039 3061948 .. 3061967 -  -3.6  -3.60151   TTTGGCAAATCACAA            GATTATCA AACA TGATTATC             ATTCTCATTTTATGA  53 156
    AM1_3038 3061274 .. 3061287 -  -2.4  -4.33151   CACTACAAGCGAAAA               TGCA GGAATA TGCA                GAAAACGGCGTGCGG  61 238
    AM1_3034 3058116 .. 3058128 -  -7.7  -2.80531   TCAAAAGTACATAAT                CTTGC CAC GCAAG                GGATACTCAAAATTC  61 493
    AM1_3031 NONE
    AM1_3030 NONE
    AM1_3029 3054247 .. 3054279 - -12.8  -2.78018   AGCCTTCATGAAGCA     TAACGCCCCGCTGGC TCAG GTCA-CGGGGCGTTA      TATCACTGAACAAAA  91 57
    AM1_3027 3052921 .. 3052947 - -10.9  -3.37537   TACTCCAAAACGTAA         GGTGCCTGCTT TTCAC AAGCAGGCACT         CAAACTTTGCATGAT  81 50
    AM1_3026 NONE
    AM1_3025 3051082 .. 3051094 -  -3.5   -5.1675   GTACTCAGCAAAAAA                TATTT CAT AAATA                GCACAGCCTTCGGTA  77 217
        cadC NONE
    AM1_3019 3046213 .. 3046227 -  -4.9  -3.09349   GAAAGCATAGATACA               CCGCC TATAT GACGG               CAATTAGACTTGTTG  51 29
    AM1_3017 NONE
    AM1_3016 3044174 .. 3044184 -    -4  -3.89346   TCGGCATTCGAGAAA                 GTTT CAG AAAC                 TTATGAAAGACCCAT  57 26
    AM1_3015 3043261 .. 3043284 -    -9  -2.65264   CCATCACGGAGATCA          TGATCATCAT CACC ATGACGATCA           TGATCATCACCACCA  63 355
    AM1_3011 NONE
    AM1_3009 3039151 .. 3039174 -  -4.5  -3.33737   TATCAACGCTTAGAA          GGCGTCACC AACGTA GATGAAGCC           AATACGATTGTGGGC  52 232
    AM1_3007 3036798 .. 3036811 -  -2.3   -4.4767   GCAGTCACCACAAAA               GGACC CAAT GGTGC                TTCTCAGATTGTTCA  61 404
        thiC NONE
    AM1_3001 3030389 .. 3030399 -  -3.2  -3.74077   TGCCATACAGTTAAA                 TCAC TTA GCGA                 CTAGCACTAGATGAT  53 15
    AM1_3000 3029529 .. 3029545 -  -4.3  -3.87075   ACTACGTCCGACAAA              CCCCGCA AGA TGCACGG              ACCATCATCCTATAA  57 42
        ompA 3027624 .. 3027634 -  -3.2  -3.23979   AGCATAAGCTATCAA                 TCAG CGT CCGA                 TGGTTGAACAAAAAT  47 11
    AM1_2998 NONE
    AM1_2997 NONE
    AM1_2996 NONE
    AM1_2995 3023390 .. 3023400 -  -6.8  -3.54951   TAGGTGAGGAGATAA                 TCCC CTA GGGA                 GTAGGGATAACCCAC  63 501
    AM1_2993 3022802 .. 3022842 -  -8.4  -3.72051   TGGAAGAAGTGGAAA GGCTAT-AGCACTGGCATC ATTG GACACCAGCGCTCACAACC  TACGAGTTAACCTGA  73 25
    AM1_2983 3008686 .. 3008697 -  -2.2  -3.12351   TTCTGTCATATTGAA                TGCC GACG GACA                 TATACACCGGACCCA  43 147
    AM1_2982 3008086 .. 3008104 -    -3  -4.62069   CGCTGAGTGTAAAAA             TGCTCATG CAG CTTGTGCA             GATCTAAAGAGCTTG  65 125
    AM1_2978 3004839 .. 3004849 -    -4  -3.54414   ATCGTCAAGGAAATA                 GAAA CCA TTTC                 TCTCCTCGATATTGG  52 205
    AM1_2976 3003597 .. 3003618 -  -3.7  -2.80935   ATTTTACCGAGGATA           TGCCACCGAA CGC CTCGG-AGCA           TTAACTGGAAAGATA  43 308
    AM1_2972 3001636 .. 3001651 -  -3.2  -3.92314   CAGCATCAAAAAAAC              CAGCAA TCTT TGGCTG               ATCTACTCGCTAAAT  55 274
    AM1_2970 NONE
    AM1_2969 NONE
    AM1_2968 NONE
    AM1_2967 2996282 .. 2996293 -  -5.8   -2.6155   CCTTTCAAGATGAAC                CGAC TGAT GTCG                 TTACTGACGACCGTC  51 319
    AM1_2965 2994821 .. 2994833 -  -2.7  -2.55847   AAGTTGCAGAGCAAG                CGATT AAA AATCA                ACTCGGCCTAATGGG  40 374
    AM1_2963 2992796 .. 2992812 -  -6.5  -3.18366   CCCCCAACCAAGATA              GCCCTCT TCT AGACGGC              AATATTCCGCTACTG  57 183
    AM1_2959 2987831 .. 2987856 -  -6.1  -4.11216   TCGGCATCTCGAAAA         CCACGCGTCAT GCCG ATGAAGCCTGG          CGGGCCGTCGAATAC  66 335
    AM1_2957 NONE
    AM1_2956 2985458 .. 2985473 -  -2.6  -4.59109   CAGAGTTTTGAAAAA              GCTCTTG GGC CAA-AGC              CTAATATTGCAATTA  65 153
         apt NONE
    AM1_2944 NONE
    AM1_2943 NONE
        tyrA 2974073 .. 2974094 -  -8.7  -3.09933   TCTGAAGTGAGCGAA           CCACCACCA TAAC TGGCAGTGG            AGGAGATATTAAGAC  69 125
        petH 2972996 .. 2973013 - -10.5  -6.06723   TTTGCCAAAAAAAAA             CGCCCCC GAAA GGGGGCA              TATTTGTTGGAATGC 100 169
        rpmF NONE
    AM1_2936 2970068 .. 2970099 -    -3    -3.695   GCGAAACATCTCAAA      CAAACGGATGCCAAA ATG TTCGGCG-CCTTTTG      GTGTCCCCATTGCGC  51 312
    AM1_2934 NONE
    AM1_2933 2968308 .. 2968322 -  -4.2  -3.25192   GCTAAGGTCATAACA               CTATCC TGA GGCTAG               AGTGGTGAGAGCAGC  51 11
        trpD 2967216 .. 2967230 -  -2.8  -3.06435   AACTAAAAAGACAAT               GCATGA CTT TCATTC               TGGCACAGTCCTCAG  43 55
    AM1_2931 NONE
    AM1_2930 2964819 .. 2964855 -   -17  -4.27316   TTTTTGAACCTAAAA    GACAATGTTTTCTATA GGCAA TATAGAAAACATTGTC    TACAAAAAAGAAAAC 100 487
    AM1_2928 2962806 .. 2962816 -    -4  -4.37092   ACGCTGTTGACAAAA                 TTTG GGC CAAA                 CGAGACCAATTATGT  65 368
    AM1_2923 NONE
    AM1_2922 2955958 .. 2955995 -  -8.5  -5.74288   ATAAACAAGAAAAAA   TTCTCGATAACGGTATG TTTA CAAATCGTTATCGAGGA    CATGAATCTGTCTTG 100 64
        ispF NONE
    AM1_2913 2948970 .. 2948980 -  -2.4  -2.76261   GTTTAATCCCGAAAC                 CCGG AAT CCCG                 TCATTAACTTGTTAC  40 427
    AM1_2909 NONE
    AM1_2908 2944737 .. 2944758 -  -8.7  -3.43117   ATATTCAACTCACAA           GTACGCAGC ATGT GTTGCGTAC            TATGTTGTCTTATGC  73 494
    AM1_2899 2935447 .. 2935457 -  -2.4  -3.74158   CTAATCAGAGGTAAA                 TGCC TAA GGCT                 TTTGGCCCATTGACA  51 214
    AM1_2898 2934968 .. 2934981 -  -5.2  -2.55015   AGTCTATGGAACGTA               GGGC AGGCTG GCCC                CTCTTATGTCAGCCT  49 115
    AM1_2897 2934223 .. 2934235 -  -2.6  -4.55016   ACAAAAAATTGAAAA                CGAG TTTTT CCCG                AAGCGAGGCTTTGGC  61 411
    AM1_2890 2929378 .. 2929424 -  -5.3  -3.33815   ATTGCTGTTAACTAA CATTAACTACG-GGACAAAACT TAAA AGCTATGTCCACGTTACTAATG ATAATGATTTTATTT  55 211
        psbA 2928204 .. 2928238 - -19.4  -4.17089   GGCAAATTCCCAAAA     GCAAGCGGTGTAGCCC CGA AGGTTACACCGCTTGC     TAATTAGATTAAATG 100 60
    AM1_2887 2926867 .. 2926882 -  -7.6  -3.18912   CGATGCAGGGATTAA              TCCGAT TGCC ATCGGA               TTTGGAGGGCTCTTT  62 134
         spp 2923101 .. 2923111 -  -5.4   -4.3739   TACCCTTGCAGAAAA                 CCAA TCA TTGG                 ACATAACTAAAATGA  68 19
        ruvA 2922344 .. 2922360 -  -2.2  -3.68351   TTGTCAGTATTCAAA              GGTGAC AAAAA GTGACC              TCATTCGTCGTCAAC  49 147
    AM1_2882 2921623 .. 2921642 -  -7.2  -3.53745   GAGACTTTAAAGCAA            CCTGCT-GA AGC TCTAGCAGG            CTTTTGGTCTCGCCA  66 18
    AM1_2880 NONE
    AM1_2879 2919164 .. 2919181 -  -4.8  -3.14344   TAGGTTGGTTAGCAA             GTCGCC TGCAAT GGCAAC              CGGTTGCCTTCACGT  50 462
    AM1_2872 2909580 .. 2909592 -  -7.7  -3.07443   TGATAGCTGATCGAA                CGGTT CAC AACCG                ACAGATGTAGAACGC  63 153
    AM1_2871 2908563 .. 2908577 -  -2.8  -4.54727   GGGTTGAAACGAAAA               TTTGGA CTC TCCAGA               GTTGCGAAGGTTTTA  65 139
    AM1_2869 2907812 .. 2907852 -  -7.7  -3.72363   CATTCAAATTTCAAA  CTAAAGGCTTGTTAGGAGA CCT TCTCTTAGCAAGTCTTTAA  TTGTGTGATGATATC  70 11
        cobK 2899635 .. 2899665 -  -2.4  -2.92792   ATGTATTTCAAATCA       TGGCAGCCCACATC AGC GGTCTGGTCTTCCA       CATCTTAGACCGGTT  42 30
    AM1_2858 2898736 .. 2898747 -  -2.2  -4.03167   CAAGACCAAGAAGAA                CAGG TCAC CCTA                 GCCAGGTTGTGATCC  53 49
    AM1_2855 2897391 .. 2897412 -  -5.1  -2.90723   TTATTCTCAACTACA           CAGGGGCTGG CAT CCA-CCACTG           ACCTAAGTATTGTGG  52 268
         rph 2896494 .. 2896508 -  -5.6  -3.75738   TAGCAGCAGGAACAA               CCACGG TCC CCACGG               AGCAGTTTGCTGAAC  59 167
    AM1_2851 NONE
    AM1_2850 NONE
        frhB NONE
    AM1_2848 2890625 .. 2890635 -  -2.4  -2.75713   AACAGACATAGATCA                 TCCC GTT GGGC                 GCTGTTGAGTAGTGC  41 12
    AM1_2847 2890020 .. 2890034 -  -5.6  -2.90212   TGACCAGTTGATACA               CCCCAC GAC GCAGGG               TCGATTGCTATAAGC  53 217
    AM1_2844 NONE
    AM1_2843 NONE
    AM1_2842 NONE
    AM1_2841 NONE
        anmK NONE
    AM1_2839 2881170 .. 2881180 -  -5.4  -2.92091   AGATCCAGTGATAGA                 CTGA GGT TCAG                 CTACCCAGGTTGCCG  52 26
    AM1_2828 2870158 .. 2870169 -  -4.4  -3.29144   GCACTGGCTTTAGAA                GAAG ATCC CTTC                 GACAAAAGCTATATC  50 457
    AM1_2824 2866780 .. 2866790 -  -2.4   -4.0127   ATATCTATAAGCAAA                 GCGG TCC CCGG                 ATCACCAAATTCTAT  55 444
    AM1_2820 2859771 .. 2859781 -  -3.2   -5.3104   TTACTAAAAACAAAA                 GCAA ACG CTGC                 CGATTCGACCACCAG  79 43
    AM1_2819 NONE
    AM1_2818 2857187 .. 2857200 -  -2.3  -3.49924   CGGAAATTACCAGAA               GGCCA AATC TGGAC                GGAAGCTTACTATCA  47 465
    AM1_2815 2856519 .. 2856540 -  -2.9  -4.41609   GAGCAGAAATATAAA           GAAGCCGCT CTCG ATCAGCTCC            ACTACATGATGGGTC  62 283
    AM1_2813 2851388 .. 2851404 -  -2.9  -4.15703   TCTTACAAATAATAA              GGTTCAG TTT CTAGACC              TCACATGGACTTTAG  57 37
    AM1_2812 2849927 .. 2849954 - -16.4  -3.90588   GACTCCTTAAGCAAA        TAGCGACGGCCT AAAA AGACCGTCGCTA         TTTGCTCAAATTCAG 100 61
    AM1_2808 2846069 .. 2846082 -  -4.5  -3.44991   GAGAAAGGGGAAACA               CTAGG ACTT CCCAG                TCAACGCAGCAGTCG  55 351
    AM1_2807 2844328 .. 2844343 -  -2.6  -3.51708   CACCCGTCAAACCAA              GGCA-TA CCT TACTGCC              GAGGACTGACCCTGA  48 18
    AM1_2806 2842782 .. 2842794 -  -6.2  -3.56226   AATGATTCAGAAACA                GGCC AAGCA GGCC                CAATTTATTGTGGTC  59 200
        msrA 2832755 .. 2832772 -  -7.7  -3.53031   TCCATCCTAAACTAA             CCCTTGC CATA GCAAGAG              CGCGACGAGGCGTTG  68 223
    AM1_2801 NONE
    AM1_2800 NONE
    AM1_2799 2829803 .. 2829833 - -18.4  -2.81464   GCATTATTTATGATA       TCAGCCCTCATGTC TAA GGCATGAGGGCTGA       TTGCTGTTCAGGCCG 100 45
    AM1_2795 2825718 .. 2825739 -  -5.9  -3.48288   GAACCTATACCAGAA           GAAAGGG GCCGTCCT CCCTTTC            ACTGTATTTGTTTTG  59 172
    AM1_2790 2822152 .. 2822166 -    -5   -3.5393   ACGAGCGTCCCGAAA               TCATCA ATC CGATGA               TTATTAATTGGCTGA  55 57
    AM1_2788 2819277 .. 2819300 -  -3.8  -3.83844   CGCACCAAGGAAGAA          CTGCCCAAAA GCAT TTTTGGCCTG           ATGCTCGAAGCATTC  57 464
    AM1_2786 2817548 .. 2817565 -  -2.6  -2.95298   CTTAGCTATTACAGA             CTCCGG CAATCC CCCGAG              AACGGCTTGACCCTT  43 384
    AM1_2785 2816723 .. 2816743 -  -4.7  -3.70109   GATATCATCCAAGAA            GGCTTAGAA CAG CTCCAAACC            TATAAACAGCAGTAT  57 318
        hupE 2814198 .. 2814234 - -13.2  -3.61398   CTTGCCCCTCAATAA    CAAAGAATGCCGTCAC TCAGT GCAACGGCATTCTTTA    TATTGCCCAATCAAC 100 92
    AM1_2777 2810026 .. 2810043 -  -4.1   -2.5511   CATCATAGGAGGAAC             CGTC-GCC CTG GGCCGACA             TGCCATCATTGGTTC  44 234
    AM1_2776 NONE
    AM1_2775 2808538 .. 2808571 - -13.9  -3.54743   TACGACGAAGTACAA     GCAGATGGCTCTCTG AAGT CAGTGAGCCATCCAC      CATTAACTACAACCG  93 253
        coaE 2805567 .. 2805580 -  -3.1  -3.63073   TATACTGCTGAAGAA               CAGGCC CTA GGC-TG               GTACTACTACCTGGA  51 454
    AM1_2759 NONE
    AM1_2752 2788627 .. 2788640 -  -3.1  -3.67976   TTGAGCAAGCGTAAA               TCCAA CATA TCGGA                TCAGCCCCTCACCGT  51 370
    AM1_2749 2784269 .. 2784285 -  -2.3  -3.18264   CCTCCGAGTGATGAA              CTCAATT CTG AACTGAA              GCAGCATGTGGTCAA  43 497
    AM1_2746 2781390 .. 2781404 -  -5.7  -3.21034   ACACAAGACATGTAA               CGCTA GCAGG TAGCG               CCGACAACGCTCATT  55 58
    AM1_2745 2780658 .. 2780678 -  -2.6  -3.92178   AGCAGTTTAATCAAA            CTGTTTAT CCACC ATAAACGG            TATCCCAGACTGCAG  54 181
    AM1_2744 NONE
    AM1_2743 NONE
    AM1_2742 2776574 .. 2776595 -  -9.5  -2.71003   GCAAGATAGGATAAG           CACTCAGCCT ATC AGGCTG-GTG           GCAGTTCTCCAATAC  68 91
    AM1_2741 NONE
    AM1_2740 2775310 .. 2775327 -  -6.3  -2.74248   CAATATCTCGTAAAG             GCCAATC TAGC GATTGAC              TGTACAGAACTGCCT  53 410
    AM1_2738 2769735 .. 2769773 -  -8.4  -5.29782   TAGAGCCATAAAAAA  TCAGTCCTCTGAACTAG GGGGAG CCA-TTCAGAGAACTGA   GTTAGACATGAGGAT 100 59
    AM1_2731 2766436 .. 2766471 -  -5.5  -3.55622   TTTAACCGGCGCAAA    CTTAGATTCGGCAACC TTAAT GTTTGCCGA-TCTGAG    CGAAGCCAACTGCCA  56 328
    AM1_2729 NONE
    AM1_2728 2761889 .. 2761900 -  -4.4  -3.72588   GAATGCAGAGTTAAA                TTGG GCTT CCAA                 AACAACTTCTCAACC  55 103
    AM1_2726 2761203 .. 2761219 - -12.3  -3.54741   CATTAGCCCCCTAAA              TCCCCCA TTC TGGGGGA              CTTTAATCCTATAGC 100 194
    AM1_2725 2758502 .. 2758531 -  -3.5  -3.45366   CTGGGAACCAATTAA       TCCAACGGCTGAG GAAG CTGAGGCGTTTGA        AGCTGCGCGTGATCA  50 246
    AM1_2720 2754714 .. 2754728 -  -8.6  -2.56596   TTTGGGATTAACTCA               TCAGCT CTT AGCTGA               GATTACAGGCATCAC  60 194
    AM1_2718 2750932 .. 2750951 -  -6.4  -3.45366   TTTTGAAGCAACTAA            GCGGGAAA AAAT TTTACCGC             CGCTTCTTTTAACAA  61 476
    AM1_2715 2747302 .. 2747324 -  -7.1  -2.60615   AGCCTTGGCAAACAG           GATCTTAGA ACTTG TCCAAGATC           AGGAGCTTTGTGAAA  56 290
    AM1_2713 NONE
    AM1_2712 2744664 .. 2744678 -  -4.3  -2.61728   AGTCGTAATACCAAT               TCACT TATTG AGTGA               CCTTTATAGTCAAAG  45 15
    AM1_2699 2730775 .. 2730791 -  -2.9  -3.55447   GCAGCCAGGAGACAA              GACCATG AAC CCTGATC              CAGTCAAATCCAAGG  49 220
    AM1_2692 2727033 .. 2727044 -    -3  -3.52341   AGCCTAAGACGAGAA                CAAA GATG TTTG                 TGACGATGCACTGAA  49 2
    AM1_2687 2723205 .. 2723218 -  -6.7  -3.54146   CCCCCCAAGGAAACA               GCAGT GACC ACTGC                CCATCCTCAAGAGTC  61 424
    AM1_2683 2721444 .. 2721463 -  -2.1  -4.15044   TTCCCGCTCAACAAA            CTGAACG CTGGAT CGTTGAG             TTTTTAAGGCAAACC  57 247
    AM1_2678 NONE
    AM1_2673 NONE
    AM1_2672 2710814 .. 2710828 -  -2.1  -3.91084   CGAGGGGGAACGAAA               GAATC AATTA GATCC               ATGATGCCACGCCTA  53 386
    AM1_2664 2705911 .. 2705938 -  -3.3  -3.39844   TTTATAGTCGAAATA        TGGCAAC-GCGG TAAAT CCGCTGGAGCCA        AGAGAATAAAGGGTT  47 91
    AM1_2663 2704574 .. 2704587 -  -8.1  -3.16742   CCCAATTCGGATTAA               GCCCA TTTT TGGGC                CTTTTTTACGGAAGA  62 364
    AM1_2661 NONE
    AM1_2660 2701027 .. 2701042 -  -3.2  -2.99584   GTCACAACAAAATAT              TCCAGA GCGA TCTGGT               GTGTTACAAACGCCT  45 395
    AM1_2657 2698945 .. 2698990 -    -2  -5.06223   ACAAAGGAAACAAAA TGAGCCTTTATGACATCCGCCA AAAT CAGCGCATTTC-TAA-GGCTCA GACCGAGAACAAACG  73 366
    AM1_2649 2689513 .. 2689524 -  -4.4  -2.69151   CGCTTTGACAGATGA                CCTA TTCC TAGG                 GAGTGGTTTGTGCAA  45 21
    AM1_2648 NONE
    AM1_2647 2687399 .. 2687413 -  -2.8  -3.64703   TTGGGGGTATTCAAA               GCCT GCTATTG AGGC               TCTCAAAACACTCAT  51 188
    AM1_2643 2682186 .. 2682202 -  -6.5   -3.6053   GCGGCGAGAAATTAA              GCACAGC CTA GCTTTGC              CCATCTGGTCCTGTC  63 105
    AM1_2642 NONE
    AM1_2641 2680247 .. 2680271 -  -3.6  -3.14931   GCCAGCTTGTACGAA         GATAGC-CAAG CCGC CTGGCGCTATC          TGACTCAAACACGGA  46 520
        ychF 2670514 .. 2670530 -  -7.3  -2.82036   AGACATGACCTAAAT              TCGTGGA ATT TCCACAA              TCCTAGAAATCTTTG  59 382
        rubR 2670149 .. 2670159 -  -5.4  -2.78712   TGGGTAAGGGAACGA                 GTTG TTA CAAC                 TTAGCCTGAAGAATA  50 26
    AM1_2631 2669034 .. 2669058 -    -5  -3.10796   GCGGAGGACTGAATA         CCCTCT-AAGC AGAT GCTTTAGGGGG          AGCAATGAAACGCAA  51 5
        psbE 2668528 .. 2668538 -  -2.4  -3.34344   CTATCTCTGAATGAA                 CTGC ATA GCTG                 CGATTGCACCCAGGA  45 143
        psbL 2668356 .. 2668376 -  -6.2  -4.56597   GTTTGTTCTCAAAAA            CGCTTATC AAATG GATAAACG            GAATTTTATGTTAGT  74 36
        psbJ 2668130 .. 2668153 - -16.8  -4.87291   CATCTTAACTAAAAA          GGGGAGTCAG TTAA CTGACTCCCC           TTTTAGATATCGCAA 100 51
    AM1_2628 2667229 .. 2667246 -  -4.1  -2.89339   CACTAATTAAAAGAG             TTTGTGC CACA GCACTAA              TATCCTTAGATTGAC  46 40
        bioD 2666254 .. 2666272 -  -4.4  -3.06796   GTCTAGCCGATCGAA             CCCCAGCC CTT GGTTGGCG             CTGGACTCGGCAACA  47 266
    AM1_2625 2665401 .. 2665429 -  -6.7  -3.27721   TAAAAGCTCAGAACA        GGTCTCAACGCTC CTA AAACGCTTAGACC        ACCACCACCGAGAAC  59 491
    AM1_2618 2656976 .. 2656987 -  -7.2  -3.17212   CCAGGATTTGAGCAA                GCCG TTAT CGGC                 ATGAACCCCGGTGAG  60 313
        valS 2652437 .. 2652453 - -10.9  -4.05033   GGGAGTGGACATAAA              CCTAGAG TCG CTCTAGG              CGATCGCGCAAGATC  90 10
        rbgA 2651470 .. 2651486 -  -2.2  -4.29981   TAAAGATACTGAAAA              TGGCCT AGAAG AGGTCA              TCTAAGCTGTAAGCG  58 97
    AM1_2611 2645719 .. 2645734 -  -5.4  -3.27382   GTTAAGAAAGACACA              GCTGTG CTTG CACAAC               ATTCCGGCAATATTT  54 188
    AM1_2607 2643596 .. 2643609 -  -3.1  -3.18086   AAACCATATATCTAA               TGAGA GCAA TCCCA                TAAACCGTTATCCCT  46 8
    AM1_2606 2642698 .. 2642708 -  -6.8  -3.14053   TGAAATGATCTAATA                 GCAC TCT GTGC                 AAGTCCACAAGCAGT  59 74
    AM1_2605 2641748 .. 2641763 -  -6.2  -4.65168   AGGATATCGCAAAAA              GATAGA CTCG TCTATC               GATTTGATGATAACT  75 135
    AM1_2602 NONE
    AM1_2601 NONE
    AM1_2600 NONE
    AM1_2596 NONE
         ddl NONE
    AM1_2594 2633113 .. 2633129 -  -6.7  -3.73775   TTTAGGGCTAGGAAA              TATCTAA ATT TTAGATA              TTGATCCGCGATCTT  65 19
    AM1_2593 2631440 .. 2631453 -  -3.9  -3.86015   CAGTCTTTCCAGAAA               GTTAA TCTC TTAAC                CGTCTAGAGTATAAC  56 55
    AM1_2586 2623466 .. 2623477 -  -4.4  -3.36327   GCATTTTAGTCACAA                GACT GAAA AGTC                 ATACATCTACTACAT  51 336
    AM1_2585 2622021 .. 2622040 -  -4.2  -3.82218   AGGGACAGCAGCAAA            GCCCCTAG ACGG CTAACGGC             ACAACGTAGCGGCTG  57 112
    AM1_2584 NONE
         dcm NONE
    AM1_2582 2619530 .. 2619553 -  -2.3  -3.72695   ATGCGGTCTACCAAA          CCAACACCC TACATC GAGAGCTGG           CCTTTTTTGTCAAGT  50 262
    AM1_2579 2616886 .. 2616935 -  -4.4  -3.78775   TGGTGGATTAGTAAA GCTTTCATCCTCTGCAAGCC AGGGCAGGGA AATCCGCAAAGGATGAAAGC AAGCGGCTTTAGAAC  57 58
    AM1_2578 2615333 .. 2615345 -  -3.4  -3.45054   CTCTAGAATTGATAA                TCCT AAACA AGGA                TTTCTTTGGGCCAGT  50 174
    AM1_2576 2614253 .. 2614276 -  -5.3  -2.83715   TTTAGTATTAGGAGA          CCACCGAGA ACTGAG TCTCGATAG           TCGGTGCTGGGGGCT  49 408
    AM1_2570 2608925 .. 2608946 -  -4.3  -3.72027   ATCCCCCAGCAAGAA           GTCGGCACC GATC GCCACCGAC            TGGACATGTGGACCC  55 516
        dnaG 2597279 .. 2597290 -    -3  -3.09492   GGTGTAACCCTAAGA                TGTA GAGC TACA                 CCAGACTTCAAATCT  46 48
         trx 2596417 .. 2596428 -  -4.4  -3.76952   GCCACCCAAGGCAAA                CTCT GGCA AGAG                 CTGCTGATCTATCAG  55 459
        hisI NONE
    AM1_2557 2593103 .. 2593126 -  -6.8  -3.53091   ATTTCCCTGGGCAAA          GAAGATAAGG TCAG CTTTATCTTC           CACCCCGGCTAAATT  63 77
    AM1_2555 NONE
    AM1_2554 2589872 .. 2589887 -    -4  -3.06796   TTGCAGTTGAGGGAA              TAGG-CG CAC CGACCTA              ATACACACCAATCGT  47 23
    AM1_2553 2589320 .. 2589335 -  -3.2  -3.25169   TTAACAAGCCAGGAA              GCTCTC CTCA GAGATC               TAAAGTCTGAAGAAT  47 17
    AM1_2552 2588051 .. 2588070 -  -3.6   -3.9534   AGTGATACGGATAAA            CCG-CCAAT GTG ATTGGTCAG            CATTCTCTCAGTGAT  58 153
    AM1_2551 NONE
    AM1_2550 2586633 .. 2586644 -  -4.4  -4.08557   TTCGTCAAAGAACAA                GATG CGCT CATC                 CGATTGTCGTGATTG  61 21
    AM1_2549 2585903 .. 2585922 -  -3.6  -3.43619   AGCAAACGCAATTAA            GAGTGA ACTTGTCA TCACTC             AGTCCCCACCCAGAA  48 178
    AM1_2547 2584947 .. 2584975 - -11.1   -3.1875   CAGATCTTAATTCAA        GCGCCGATCAA GAAGTCG TTGATCGACGC        CAGTACTGAATACCC  79 4
    AM1_2546 2583932 .. 2583955 -  -3.8  -4.82901   TTTCTTCCATAAAAA          GGCATCTGGCA TTG TGCCTG-TACC          TCTCTAGTCAGAGAT  70 49
    AM1_2544 2582565 .. 2582576 -  -5.8  -3.77087   TATCCAAGATTGAAA                CCCA AGGC TGGG                 TAACCCATGAGCTGG  61 411
    AM1_2543 NONE
    AM1_2542 2577671 .. 2577682 -  -2.2  -3.10641   CAATTTAGTATTGAA                GAGC ACGT ACTC                 TATTATCGGAACCAT  43 228
    AM1_2539 2573779 .. 2573807 -  -5.3   -3.9131   AGCGAGCAAAAAAAG       GCTCCCTTTCAC ACTGTG GTG-AGGGGAGC        GGTAACTACTCATTC  63 279
    AM1_2536 2570442 .. 2570458 -  -2.2  -3.54146   CTGGTCAATGAAATA              GGCG TTAGGTGTT CGCC              ATTTCTAACCCATTG  47 180
    AM1_2535 2568658 .. 2568684 -  -2.9   -4.5774   TAGTAAGAACCAAAA         CCCGAGAGCAA TTGAG TCACTCACGAG         GTATATCAAGCAGCT  61 279
    AM1_2534 2568114 .. 2568127 -  -4.5  -4.17556   CATACTGTCAACAAA               GCCAG CCTT CTGAC                ACTGATGCCCGCCCA  63 118
    AM1_2533 2566846 .. 2566856 -  -6.8  -3.10343   ATAGTTACGATTGAA                 TGGC TCT GCCA                 CTTAAATAATTAGCC  59 27
    AM1_2531 2565543 .. 2565581 -  -3.7  -4.28656   ATTCAAGACTTAAAA   CAGCGCTACTCCGAGAT TGTGG ATCGAGGGGCAGAGCTG   CTGATGATTTCCAGT  60 286
    AM1_2530 2564494 .. 2564506 -  -7.7  -2.90194   AGTTGTTGAAGGAGA                TAGCC TCA GGCTA                GTGGCTTGCAGTTTC  61 140
    AM1_2524 2559117 .. 2559132 -  -3.2  -2.89564   TGCCGATTGCATATA              GCCC AAACCAAA GGGC               AAATGTCTTGATAGA  43 126
    AM1_2521 2558706 .. 2558716 -  -2.4  -3.32268   GAACCACTTGTACAA                 CCTC GCT GGGG                 GGACTACTATGCAGC  45 70
    AM1_2520 NONE
    AM1_2519 2556229 .. 2556254 -  -4.1  -4.03234   TTTTGCCCAGAGAAA         GATGAT-GCG TATCGCC CGCCATCATC         ATGGATCATTGCTGC  59 164
    AM1_2518 2554897 .. 2554915 -  -5.2  -3.65902   GCCAGCTGATCCAAA             CCCTGACG GCT CACCAAGG             CAGCATTTCGACCTT  59 169
    AM1_2513 NONE
        dnaE 2545607 .. 2545619 -  -6.3  -2.69601   TCCACATTAAACCTA                GTACA GGG TGTAC                TTTAAATTACATATA  54 92
    AM1_2511 2542758 .. 2542771 -  -4.5    -3.827   AACAACTAATGTAAA               GCCCT TTAT AAGGC                ATGGTAATTCATTGT  59 71
    AM1_2510 2539343 .. 2539356 -  -2.4  -4.06562   AACGGGAATGACAAA               TCTG GCTCAG CAGA                TAGGCTGGCAAGCAA  55 461
    AM1_2507 2536259 .. 2536295 -  -4.5  -4.49756   CGGCAAATACCAAAA    CCCAACCGTATCC TAACTGCTTGT GGATACGGTTGTA    GTGATTTTGATGTTG  68 93
    AM1_2506 2533502 .. 2533514 -  -2.6  -2.76483   TAGGCAAACCATAAC                CAGC AATGG GCCG                TCCCTAGAAGACAAG  42 58
    AM1_2505 2529816 .. 2529826 -  -5.4  -3.40191   GTCAGAAGATACCAA                 TGAG TGA CTCA                 CACATACTGATTTAA  55 141
        sasA 2528535 .. 2528554 -  -3.6  -2.65339   ATAAAATTTTATAAC            TGTTATCA AAAT TGATAACT             TTATCGTTCATCTAG  44 60
        psaE NONE
        mutM 2527017 .. 2527027 -  -3.2  -3.41962   CGGCAAGACAGAAGA                 CGGT AAA ACCA                 AACTCAAATCGCCCA  48 270
    AM1_2500 2525367 .. 2525384 -  -6.3  -2.95116   TTAGCAGTTAAAGCA             TGGGTTC GCCA AAACCCA              GAGCGCCCCCTTCAA  55 219
    AM1_2489 2514697 .. 2514717 - -11.9  -5.36441   CCCTGACAGAAAAAA            GACAACCTC AGT GAGGTTGCC            TTTTCGAAGAAGCTA 100 69
    AM1_2488 2513660 .. 2513674 -  -2.8   -4.4959   CTTAATGAAGTAAAA               TCGTCA CTC TGAAGA               CTTCTCCTCTAACCT  61 146
    AM1_2487 2513348 .. 2513358 -  -3.2  -3.59979   TGCGGCCACCTTAAA                 CGTC GTA AACG                 CGGCACTCTTCTGCA  51 10
    AM1_2486 2512803 .. 2512826 - -10.2   -3.9398   CCACAATTTCAGAAA          GCCCCACGAC TAGA GTTGCGGGGC           TTTTTATCTTGGTAT  89 40
    AM1_2481 NONE
    AM1_2473 2497681 .. 2497692 -  -5.8  -3.20226   ATACTAACCAATACA                CGGT TCAC ACCG                 TTCAATGCCCATTCC  55 119
    AM1_2472 NONE
    AM1_2471 2494787 .. 2494808 -  -7.4  -4.11692   TATCCACCTCTAAAA           CGTTTTGA GGTTGA TCAAAACG            TTGATGTTAAACAAG  71 208
    AM1_2469 2492681 .. 2492692 -  -4.4  -3.63515   GTCCAGCTCCAACAA                CTGT TGCA ACAG                 ATTGTATGAGGGGTC  54 61
    AM1_2466 NONE
    AM1_2465 2486101 .. 2486115 -  -4.2   -3.9243   TAATCGCTGAAAGAA               CAGTCA TCC TGGCTG               CCATTTGGACGGTGG  59 58
    AM1_2461 2478477 .. 2478488 -  -4.4  -3.77464   ATATCACTCATCAAA                GGAT TGAG ATCC                 TTTGTTTTTGCTCTC  57 2
    AM1_2460 NONE
    AM1_2459 2477428 .. 2477456 - -17.5  -3.44444   CGATAAATAGATTAA        TCCCCCCTCAACA TAG TGTTGAGGGGGGT        TTCGATTGAAGGGAA 100 170
    AM1_2456 2468323 .. 2468343 -  -2.5  -4.05446   CTTTTGAATTAGAAA            TTGAGAAAG ATA CCCTCTCAG            TTATGCAGACATCGG  54 43
    AM1_2455 2467373 .. 2467387 -  -6.4   -3.7282   GGATTTCACGAATAA               GCTGTG CTC CACAAC               ATCATAGATCTTCAG  63 60
    AM1_2454 NONE
    AM1_2451 NONE
    AM1_2450 2460026 .. 2460040 -  -4.3  -3.97911   AGGAAACACACTAAA               TGTAG GACTG CTACA               CGCTAATTCCCAGAG  59 45
    AM1_2449 NONE
    AM1_2447 2457725 .. 2457736 -  -5.8  -3.30443   GCATCATCACAGGAA                GCGA TTGA TCGC                 ACAACTCCCTTGGAA  57 166
    AM1_2442 2449757 .. 2449796 -  -7.3  -2.89881   CATGGATTCTAGACA GAGGCCAATGA--GCACCA TCCT TGATGCAATCTTTGGCCTC  TGTCTAGAATCCTGG  59 101
    AM1_2438 2444041 .. 2444052 -  -4.4  -4.85177   AAACCATAGTAAAAA                CCTA ATGT TAGG                 TAGGAGTAATATTCA  71 284
    AM1_2437 2442738 .. 2442758 -  -3.9  -3.31144   CCTCCAGGTTCAGAA            TGGGGCGAT GCG ATCGCTACA            TTAACTAATGTTAAC  49 61
        ftsH 2440790 .. 2440811 - -14.5  -5.27477   ATCGCAATCAAAAAA           GAGGCTCTG CAAG CAGAGCCTC            TTGAGGTAGTCAATG 100 91
    AM1_2434 2440164 .. 2440178 -  -5.6  -2.78715   AACGTCCTTATCATA               TCGGCT CTA AGCCGC               TTTCAGGTTAAGGGA  53 17
    AM1_2433 NONE
    AM1_2432 NONE
    AM1_2431 2437103 .. 2437131 - -16.1  -5.00884   ATGCCTGCGAAAAAA        TGGCTCAGCCTTT CCT AAGGGCTGAGCCA        TTTTGATGTCTTTCC 100 115
    AM1_2430 2435540 .. 2435563 -  -2.4  -3.08224   ATTCCACCTTAAAAC          CACTTAGAGT CGCA AATCTCAGTG           TAAACCATTGTCTGT  43 87
    AM1_2429 NONE
        phrB 2432115 .. 2432125 -  -2.6  -3.64541   TTATTAAATCAAATA                 TTTA ATT TAAA                 GTAGCAATCTTAGCT  50 224
    AM1_2425 2429567 .. 2429585 -  -4.6  -2.66316   TTGTTGAGTAGACTA             TTGCCATA CCC TATTGCAA             GCAGACAGAACATGA  48 135
    AM1_2424 2428566 .. 2428583 -  -4.1  -4.10161   TATCACCTGTTAAAA             TGCCTCA TTCT CAAGGCA              TTCGGCACTGTATCT  60 160
    AM1_2420 2425119 .. 2425131 -  -4.1    -3.551   TTTGAAGGGAGACAA                CCTCT ACC AGAGA                AGGTCCACTCCTATA  52 58
        pilD 2424076 .. 2424102 -  -3.6  -3.47841   ACATTTACATGACAA         TTCCACAGGG CAAGCCC CCCTGAGGCA         ACAACAGCCTTGGAC  51 117
    AM1_2418 2423609 .. 2423638 -  -6.3  -3.29727   TGCAATCAAGGAAGA       GAACGCGGCCCAG GCAG CTGAGCTGTGCTC        TTAGCTTAGATGTAA  59 31
        cysK 2422549 .. 2422567 -  -4.5  -3.05816   GGATGTCTTACCTAA             CCCCAGT TCAGC ACTTGGG             AGATTCTCCCACGCA  50 85
    AM1_2416 2421863 .. 2421883 -  -8.4  -3.15544   TCCCATCGTTATCAA            GGAAGTAT GGGTG ATACTTCC            TTCTGATCATTTCAC  67 37
         adk 2420125 .. 2420139 -  -6.4   -3.4489   AAGGTCGAGAATCAA               GGTTAG AGG CCAACC               AGTATTCTTGAAGTT  61 86
        tktA 2418016 .. 2418043 - -11.4  -5.47218   TCCTAGGGAAAAAAA        TATCTCCCCAAC ATCC GTCAGGGAGATA         TTCCAAGAGTTAATC 100 50
    AM1_2412 NONE
    AM1_2411 NONE
    AM1_2410 2413357 .. 2413368 -  -2.2  -3.21395   ATCTGTGTCATAACA                GCTC ACTC AAGC                 AACGGATTACGATTA  43 51
    AM1_2409 2413003 .. 2413013 -  -5.4  -3.41878   GTTTCTAAGGGACAA                 TACC CCT GGTA                 TCCAGCGAGCATGCC  57 209
    AM1_2405 2409769 .. 2409789 -  -8.3  -3.61715   GAGGGCGTTGAACAA            GGCGTTG GAGCGGG CAACGCC            TGAGATTCACCATTC  71 402
    AM1_2402 2407110 .. 2407140 -  -8.2  -2.85056   ATCTCCAACCCAAAT       TTGCAGGCAGTGAC TTT GTCGCGGCCCACAA       CGCTAATTTTGATCG  62 469
    AM1_2400 2405975 .. 2405990 -  -3.3  -3.07816   GTGCTACTTACGCAA              CAGAT ATCGCG ATCTG               ACTCGAATTTTAAGT  46 234
    AM1_2398 NONE
    AM1_2397 NONE
    AM1_2396 2402555 .. 2402567 -  -3.3   -4.2142   AACATGCGAAAACAA                CAGCT AGT AGCGG                TGATAGCAGCTATTT  58 331
    AM1_2395 2401699 .. 2401709 -    -4  -3.33419   AGCTGCAAACCAATA                 GTTT CAT AAAC                 ACGAACAGAAAACTA  51 88
        nmrA NONE
         tpm NONE
    AM1_2392 2399025 .. 2399037 -  -7.7  -4.00038   TATGATGAGGATAAA                GCCAA GGC TTGGC                AAGCGTTCTACAAAA  73 135
    AM1_2388 2393839 .. 2393865 - -12.3  -3.17443   CGCATACAACAGAGA         CCCAGCCGTTA CACGT TTACGGCTGGG         TATTCCTGCTCCCTC  93 78
    AM1_2387 2391183 .. 2391199 -  -3.7  -3.09242   GCAACACAAAAAGAC              GTCTCTT TTG AAGATAC              CTAATTGGCGTCGAC  48 26
        cruP NONE
         pgp 2388555 .. 2388575 -  -6.1   -4.3586   GCAGCGATACCAAAA            CTGCAGTCA TGC CGACTGAAG            TGTGGACCACTATTG  72 150
    AM1_2380 NONE
    AM1_2379 NONE
    AM1_2378 2382039 .. 2382053 -  -4.2   -3.7941   GATTCCTTACAACAA               TGCAGC TTC GCTCCA               ACAAACCCGCAAGAT  57 190
        apcB 2379910 .. 2379939 - -19.5  -2.91695   GTTACTCTTAAAGCA       TAAGCGCTCTCAG ATTT CTGAGAGCGCTTA        AATCATTGTTATCGA 100 70
    AM1_2373 2374187 .. 2374201 -  -2.8  -3.54475   TTGTTGAGCATACAA               TCCG TTTAGTG CGGA               TTTTCCGAGTTGCCC  49 337
    AM1_2370 2372006 .. 2372016 -  -5.4  -3.35679   GTGGCGGATCCACAA                 CGTT AGT AACG                 TCTACCCGATCTGGA  55 445
    AM1_2368 2370251 .. 2370270 -  -3.5  -3.92542   GGCATTTGCAAATAA            GGTTTGC TGATCG GCATACC             AAAAACTCAAACTAG  58 160
    AM1_2367 2369174 .. 2369184 -  -6.8  -2.90797   CCGATACAGACGATA                 TGCG AGA CGCA                 CCAGCCCTCACCCTG  54 350
        panD 2360695 .. 2360724 -  -2.1  -2.62463   CCGATCAGCCACAAT       GTACCTGCTCTAA GGAA TCAGAACATGTGC        CAATTATCCCATTTC  40 85
         kmo 2359370 .. 2359393 -  -2.4  -5.80817   TTTAAGATAAAAAAA          TGG-CGGACGA TTC TCGTTCATCCA          GCATCAACATAATGT  85 46
    AM1_2356 2358055 .. 2358065 -  -5.4  -3.07029   GAAAGATGGCCAATA                 GTCT AAA AGAC                 TGATTTAATTTCATC  52 453
        dapF 2352161 .. 2352173 -  -6.3  -3.61715   GAGCCCTTTGAAGAA                GTTCT CAA AGAAC                GTCATCGCTACTACA  63 331
    AM1_2345 2348477 .. 2348500 -  -9.8  -3.11291   GCCAGAACCCTAAGA          TTTTGTTAAG TATA CTTAACAAAA           TCGAGTCCCCAAAAC  74 406
        exsB 2347553 .. 2347563 -  -4.6  -3.14931   GGGAGTGGCGATCAA                 CCCC ATC GGAG                 GAAAATAGAGGTCGA  51 49
    AM1_2342 2346747 .. 2346759 -  -3.3  -4.07568   GGTTGCGGGGGAAAA                CGGCT TAA AGCTG                CCCCAGAAACTTATG  56 17
    AM1_2339 2342216 .. 2342230 -  -2.8  -3.33171   CGTAACAATCACTAA               GCAATT ACT AAATGC               GATGCTCTTAGATTC  46 144
    AM1_2338 NONE
    AM1_2337 2340175 .. 2340194 -  -7.2    -3.214   TTCAGTATATGAATA            TATGGAAG TGGA CCTCCATA             CTGTTGATGCTCATG  60 361
    AM1_2335 NONE
    AM1_2334 2337205 .. 2337215 -  -6.8  -2.62263   ATTGTCGTGACATGA                 CCGA TAT TCGG                 GACGCAATTGATCAC  53 304
        clpP NONE
        clpP 2334089 .. 2334099 -    -4  -3.53012   CTTGGGGGCCGGAAA                 GATT CTG AATC                 CCAATACGAGTAGTC  52 356
    AM1_2326 2329010 .. 2329029 -  -3.5  -3.89572   ATGGAATCAGAAGAA            GAGCCCC ATGAAG AAGGCTC             AGGTAATTTGCGATT  55 499
    AM1_2324 2325110 .. 2325128 -  -4.6  -4.18018   TTCGCCGACTCAAAA             CTCAAAAC AAG GTTTTGAT             GGGCTCCTTAGCAGG  64 162
    AM1_2319 2320325 .. 2320335 -  -3.2   -3.1886   ACGCAATGGGAGCAA                 CATC CAC GACG                 GTCAGACATTCCCCG  46 88
    AM1_2318 NONE
    AM1_2317 NONE
    AM1_2316 NONE
    AM1_2315 NONE
        metG 2313768 .. 2313781 -  -3.1  -3.50447   GTAACCCTGAGACAA               TCCTC AAGT GAAGA                CGGCAAAGTGCTAGG  49 36
    AM1_2313 NONE
    AM1_2312 2311559 .. 2311572 -  -8.1  -3.08679   CCTCGGTATTCAACA               GGAGC TAAA GCTCC                ATCAGCTCACCCTTG  60 377
    AM1_2310 2308687 .. 2308703 -  -6.5  -2.67439   AATGGGAGCAAATAT              CACCGAG CAA CCCGATG              GATTAGAGATCCAAG  53 263
    AM1_2308 NONE
         ppa 2306239 .. 2306262 -   -14  -3.60792   TGGCTAAGGGGCAAA          CTCTCGTATC GACT GATACGAGAG           TAGGAGAGAGGTAAG 100 121
    AM1_2306 2305338 .. 2305352 -  -8.6  -2.79312   AAAGTTTTTACTAGA               CCATCA ATG TGATGG               TATCCAAGGATATTT  62 107
    AM1_2299 NONE
    AM1_2298 2296396 .. 2296411 -  -2.5  -2.78384   TCTTTGCTCAGTACA              GGACA ATTCTA TGCCC               TGGCATCACCCATAT  42 18
    AM1_2297 2295703 .. 2295721 -    -3  -3.18383   ATGGCCACTCATCAA             GCTGTACA AAT TGATCAGC             TTATTGTTGCCTTAA  45 120
        acsF 2293167 .. 2293192 -   -12    -5.243   CAAAGCATCAAAAAA         CCACCAAAAG TTGATG CTTTTGGTGG          TTAGTAAGGTTAGGT 100 53
    AM1_2294 2291556 .. 2291573 -  -4.1   -4.2558   GATTCGCCATTAAAA             CATCCCT ATCC AGGTATG              GATGCCCCACTAATT  63 117
    AM1_2293 2289661 .. 2289680 -  -6.4  -2.96189   AACTGAAGAGCAAAT            GCGA-GCCA AAC CGGCCTCGC            CATCCACGTCTTCTG  55 319
    AM1_2290 2286785 .. 2286801 -  -5.9  -3.38522   TATGGACGGCAAAGA              TAGCTTT ATT AAAGCCA              TAGACGTAAAGGCAG  57 326
    AM1_2285 2284266 .. 2284279 -  -3.7  -3.72576   CTCGCTTGCATTAAA               GGGAG GAGA CACCC                GATGCACACCTTACA  53 93
    AM1_2284 NONE
        glpX 2282234 .. 2282258 - -12.9  -4.41895   AAGGCGTAATGAAAA          GGCCCTGAATC GGG GACTCAGAGCC          TGAAAGCTTAATGCA 100 33
        glgC 2280713 .. 2280729 -    -8  -3.43676   CCGATTAACTTAGAA              CCTCCT CTAGT AGGAGG              TTTAATTATTTTAAA  64 194
    AM1_2279 NONE
    AM1_2278 2278819 .. 2278830 -    -3  -3.29947   CAGTCACCAGAGTAA                TGAT TAAA ATCA                 ACAGGTAAATTTGTA  47 266
    AM1_2277 2276857 .. 2276867 -  -3.2  -2.73007   AATATCTTGCTAAAG                 GACG AAA CATC                 AAAAGCTATCTAGTT  42 56
    AM1_2276 2275993 .. 2276007 -  -2.8  -4.10179   GATAAGGTAGAGAAA               GTGCAA TTC TTGCAA               AAGGTCCGCTCCTCA  57 106
    AM1_2274 2273137 .. 2273147 -  -6.8  -3.07043   GCCACCATCCCAACA                 GGCT TAA AGCC                 ATAGAGGAAAGTAGT  55 319
    AM1_2262 2264777 .. 2264796 -  -4.2  -4.08767   TGCATTTCCCCAAAA            CGGCTGAG AATC CTCAGACA             AATGCGTCAAAATTG  61 524
    AM1_2259 NONE
    AM1_2258 NONE
    AM1_2257 2261735 .. 2261745 -  -6.8  -2.87622   GATGTGTACAAGAAT                 CGCT AAT AGCG                 CTTTCAGGTAATTTC  57 456
    AM1_2254 2260533 .. 2260555 -  -7.7   -2.5092   GAATATTGCATCAAC           CGTTTCACC ATGGA GGTGAAGCG           CCAGCTTGACGTCCT  57 513
    AM1_2252 2258912 .. 2258930 -  -4.5  -3.12936   ATTCAAAGGTCAATA             TTGCACG GATAG CGTGCAT             CAGCGTTGTTTAATG  51 35
    AM1_2250 2257576 .. 2257591 -    -4  -3.16683   AGCTGACTTTATCAA              GC-TCCA AGA TGGAAGC              ATTATCCGTCTGGAT  48 465
    AM1_2244 2254377 .. 2254401 -  -9.4  -5.75945   ATGTTGCAAAAAAAA          TCACTCATCT ATAAG AGATGAGCGA          GAGGAGAGTTTTGAT 100 61
    AM1_2243 2253226 .. 2253236 -  -3.2  -3.50449   ACGATAAAGGCACAA                 GCAC AAG ATGC                 CTTTGCGTTCGCTCA  50 437
    AM1_2238 NONE
    AM1_2237 NONE
    AM1_2236 NONE
    AM1_2235 NONE
    AM1_2234 NONE
    AM1_2233 NONE
    AM1_2231 NONE
    AM1_2225 2234493 .. 2234515 -  -3.5  -3.59109   TGAGACACTAGAGAA           CTTTATCTA TCGGC TAGAAAAAG           CTGGCTTTGGCTATT  50 111
    AM1_2221 2226693 .. 2226720 - -12.8  -4.63486   ACCTTCCCAAGAAAA        TACCCCGACTGC AAAA GCAATCGAGGTA         CGACAGACACATGAT 100 113
    AM1_2217 NONE
         rfc 2222336 .. 2222357 -  -2.2  -2.53263   CTGATGGGCAAGTGA           TTCGCCCT TCCCTT AGAGCGAT            ACGGCGGTATCAGCC  39 16
    AM1_2215 2221419 .. 2221460 -  -2.9  -4.40552   GCGATCAAAAAAATA GACCGATACTTGCTCCCCT GGAA AGGAAGGTCAGCATCAGTC  TGGCGTGAGGTTTAG  59 73
    AM1_2214 2220767 .. 2220807 -  -6.7  -2.67428   GTCATGAATAATCCA  GGTTAGGACGACCAGAGGT AGC ATCCAGGGCCGTCCTCACC  GCCGAACAGGAGGAG  56 240
    AM1_2213 2218375 .. 2218409 -  -8.7  -2.79327   GTACGGTAGCCAAAG    CCGTAGAAGTGATGAC GATG ATCATCCCTTC-ACGG     ATGCTGAAGCGAGAC  67 384
    AM1_2210 NONE
    AM1_2209 NONE
    AM1_2208 2213485 .. 2213497 -  -6.3  -2.57944   CATCATGAGATGAAC                GTTGA TCA TCAAC                AGCTAGTCCATGGCT  54 28
    AM1_2207 2212623 .. 2212637 -    -5  -3.54935   CAAATGTTCTGCAAA               TCTGCT TTT AGCAAA               TAGTTTAGGCTACTT  55 47
    AM1_2206 2211724 .. 2211741 -    -2  -3.97368   TGTTCAATTGAGAAA             GTGGTCG TAAAG CGAC-AC             CAGTCTTAAAAAGCC  53 352
    AM1_2205 2211462 .. 2211474 -  -2.7  -4.68506   AAGTAAGTGGAAAAA                TCTAG AAA CTAAA                TAGCTTCAAAGACGC  64 21
    AM1_2203 2209163 .. 2209182 -  -7.2  -3.96892   AACTTTCACGACAAA            GTTA-GGGG GTT CCCCTTAAC            TTAGATATCCCCCCT  72 167
    AM1_2201 2206211 .. 2206221 -  -2.4  -3.30781   GGAATCTAAACTGAA                 CGCC CCT GGCT                 ATATCCAGTTTGCCA  45 131
    AM1_2180 2183807 .. 2183820 -  -2.3  -4.67353   TGATCCACTTAAAAA               GCGCC GTTC AGCAC                CTTAAAACCCAGGGT  67 310
    AM1_2179 2180648 .. 2180660 -  -3.5  -3.17206   GAACATTGATCAATA                TTAAT CCC ATTAA                AGTTCGAATCCTTCA  48 63
    AM1_2178 2177657 .. 2177674 -    -2  -3.96624   GACTTTGAGCATAAA             CCCAAT GATGAA ATTGGA              GTGCTTGCAGCCTCC  55 188
    AM1_2176 2175646 .. 2175665 -  -3.5  -3.20633   TCAGAATACATCTAA            GGAGCAG GAACTT CTGCTGC             TTCATATAAAGGAGC  48 2
    AM1_2174 NONE
    AM1_2173 NONE
        purD 2172392 .. 2172407 -    -4  -2.67209   CACGAATTCACACCA              CTGATA TGTC CATCAG               CGCGAGTGCTGCCCC  44 164
    AM1_2168 2168316 .. 2168327 -    -3  -3.04609   CCAGTCAAATGAAAG                GAAT TTGA ATTC                 ATCCTACGGGAGGTC  44 129
    AM1_2167 2167896 .. 2167906 -  -2.6  -2.63208   CCCTATTTAAAAATG                 TAAA CTT TTTA                 AGTATTTCTTAGGAT  41 57
        psbA 2166623 .. 2166648 - -14.1  -4.99035   GCATTTACACAAAAA         TAAAGCGCCCC CGGA GGAGCGCTTTA          TTCAAATTAGGTTCT 100 91
    AM1_2154 2150937 .. 2150966 -  -6.5  -3.35224   ATATTCCTTGAAAGA       TGGGAGCATTG GACTGACA CAACACTCCCA        TATCCGAATTTGTAC  59 75
        polA 2147009 .. 2147034 -  -9.1  -3.57561   GTCCAAGGCTTCAAA         CATGAGATCTA CTGT CAGACCTCATG          GAAGTTCAACCGTGA  75 85
    AM1_2146 2137977 .. 2137989 -  -7.7  -2.76743   AAGACCAAACAACAT                CTGGA ATA TCCAG                GAGCCTTTCACGACT  59 151
    AM1_2138 NONE
    AM1_2137 NONE
         mdh 2131320 .. 2131334 -  -2.7  -3.53444   CGATTCTGGTCGAAA               CGGGG TTTCT CACCG               GTGCCCAAGACATTG  49 126
        nuoL NONE
        nuoM 2117445 .. 2117481 - -13.2  -3.48288   CAACCTAGACCATAA   TCGAA-CCCCCTAGAAC TATC GTTCTAGGGGGCTTTGA    GTGAGGAGTTAATGC 100 55
        rpmI 2114258 .. 2114268 -    -4  -4.19817   TTTAGGTAGGGAAAA                 CTAT TGA ATAG                 GTATAAAGTCAAAGC  61 59
        rplT 2113421 .. 2113433 -  -3.4   -3.9093   CCCAGGACACAATAA                TGGT GATCA ACCA                GGGCCACCCTCTAAA  56 460
        accC 2109561 .. 2109572 -  -2.2  -3.58269   CAAGTCAGCTTCAAA                CAAC TGCT GCTG                 CTATGCCAACCCTAG  49 458
        psbX 2109078 .. 2109114 -  -5.1  -4.92314   ATCAACCTATAAAAA    CGAAGAACGGCTGAACA GTA TTTCCAGCCGTGCTTTA    AGAAAACATATTTTA  78 156
    AM1_2119 2107743 .. 2107758 -  -4.7  -4.20516   TCGGCATTCAAGAAA              TTGCC CGAACT GGCAA               GATTGCCTTAACCCG  64 135
        glgP NONE
    AM1_2113 2101033 .. 2101045 -  -4.8  -3.29649   ATTTGATTACAGCAA                TGGC GCTAG GCCA                TCTCAGACCTGTGAC  53 18
    AM1_2112 NONE
    AM1_2110 2098251 .. 2098263 -  -4.1  -3.61609   TCACTTAAAGCAGAA                CTCAA CGA TCGAG                GGTGGCGTCTTACAC  52 402
        ccb1 2095760 .. 2095776 -  -4.4  -5.47218   GGTCATGCAAAAAAA             TGG-GGG TGTT CCCACCA              GCGAGAGCTATATCC  83 118
    AM1_2104 2093717 .. 2093732 -  -3.3  -3.13475   GAAGGGCATACGCAA              GAACT CACTTT AGTTC               GATATCAACTGTCGC  46 19
        malQ 2091684 .. 2091697 -  -3.8  -3.63515   TGGCAGCCTTAAGAA               CCCT ACCAGA AGGG                ACCTTTGGACAGATC  55 518
    AM1_2100 NONE
    AM1_2099 NONE
    AM1_2097 2088118 .. 2088130 -  -7.7  -4.21974   GCAGGACCTAAGAAA                GCCTT TCA AAGGC                AAAAACTTTGATTCT  75 150
    AM1_2095 NONE
         gnd 2083864 .. 2083883 - -13.6  -3.35798   ACCCTGCACCGAGAA            CTGCCGTG CTAC CACGGCAG             TTCCAGCTTATCCCA 100 61
    AM1_2090 2082747 .. 2082766 -  -7.9  -2.90075   GTCTCTGGAAGCAGA            TTCGGTC AAATTA GACCGAA             ACCTCGTCGCCGCGC  59 390
    AM1_2087 2079684 .. 2079705 -  -4.4  -3.85698   GCGGGCCTGCATAAA           CAGCCAAG AATCGG CTCGACTG            TGACTGCAATTATAT  57 98
    AM1_2086 2079379 .. 2079392 -  -5.2  -4.56597   TTCTCCTCTCAAAAA               CGCG CTGGGT CGCG                AGCTGCGCTCCATCC  70 170
         ccp NONE
    AM1_2084 2076275 .. 2076292 -  -3.4  -3.05159   GCAGAGGAAATGACA             CTCCCA AAATAA TAGGAG              ACGCCAACAATACAC  44 184
    AM1_2083 2074513 .. 2074531 -    -6  -3.06696   TTGTCTCCTAATATA             CTTTTTGG GTT CCGAAAAG             CATGTTCTCAGATAC  54 129
    AM1_2082 2073631 .. 2073661 -  -5.5  -4.04318   CTCAGACAGCAGAAA      CCACCTCATTATCG CTAG CGACAATG-GCTGG       AGCTAAGCTGCTAGC  63 46
    AM1_2081 NONE
    AM1_2080 NONE
        appC 2069660 .. 2069672 -  -3.3  -3.36492   TGTTCAACCTGATAA                CCCTG ATG CAGTG                GGTCTTTGGGACCAC  48 152
    AM1_2076 NONE
    AM1_2075 2066772 .. 2066782 -  -5.4  -3.53012   CGCTCTGCTCTCAAA                 GCTA AGC TAGC                 TGTTTGATTGAGCTT  57 44
    AM1_2073 2065051 .. 2065074 -  -8.1  -3.34209   CTAACATAACCAACA          GCAGCTCAG GGTCAA CTGTGCTGC           TTTTTTCGTGGTTCA  66 91
    AM1_2067 2059860 .. 2059878 -  -5.2  -2.91438   AAGTAGGAGAAGAAG             GACAGTGG ATT CCATCGTC             TGCCAGAAATGTAGC  49 390
    AM1_2064 2058241 .. 2058252 -  -4.4  -3.53012   CTGTTGTTCTCTAAA                TTCC TAGA GGAA                 GCGGTTGGTATCTAA  52 17
    AM1_2063 2057713 .. 2057727 -  -7.2   -3.9377   AGAAGGCGAATGAAA               TACTAC AAT GTAGTA               TAACTAGTTCATGGC  72 88
    AM1_2062 NONE
        thrA 2055662 .. 2055675 -  -2.3  -3.79687   AGTCTCTACAAAACA               CGCAG CAGA CTGGG                AATAGAGCTAATGGC  51 2
    AM1_2057 2051027 .. 2051037 -  -3.2   -4.1822   GTGCATTCCAACAAA                 CTGG CCC CCAA                 TTCGGGGGCATTTTA  58 195
    AM1_2055 2048414 .. 2048426 -  -3.4  -3.02144   CGAGGCGTTGGAATA                TCAG ACAAG CTGA                AGCCCTTAATAGATT  44 120
    AM1_2054 2047246 .. 2047258 -  -4.1  -3.00797   TTTAAATTGATAAAT                TGCGA CAT TCACA                GCAGCATTTCTATGA  47 35
    AM1_2053 2046595 .. 2046634 -   -21  -5.09685   TAAGACAGACAAAAA  GCCCACTTGAATTCTGAG CCAT CCCAGAATTCAAGTGGAC   CCATCGAGGCAGGGT 100 46
        petG 2044655 .. 2044680 - -12.7  -4.99043   CTGGCATAAACAAAA         TCAGAGAGACG AACC CATCTCTCTGA          TTTACAGATAACAAA 100 90
    AM1_2047 2041365 .. 2041403 - -24.2  -4.52857   ATTTTGCATATAAAA   GCCAAAGCCCTTTAGATT CAA AACCTAAAGGGCTTTGGC   TTTTGATACAAGCAT 100 82
        petH 2038647 .. 2038670 - -18.2  -4.99435   TCTAACAACCAAAAA          GGAGCCTCCC ATAT GGGAGGCTCC           TTTTTGATGGCTGAC 100 54
        topA 2033845 .. 2033860 -  -3.2  -2.88069   TCTACACGAGAACTA              TGGCCA CTTG TGGTCA               CTTAGAACTGATGAC  43 40
    AM1_2042 2032272 .. 2032285 -  -3.1  -3.48342   AATGAATCAGCAGAA               GAG-GG GGG CCGCTC               TCGGCTTTAGCATAC  49 98
    AM1_2041 NONE
    AM1_2040 NONE
    AM1_2039 2028409 .. 2028425 -  -5.1  -3.45945   TTGAGTGACAATCAA              CTGAGCA ACC TGCCCAA              AGAGATGGGGCAACT  56 243
    AM1_2037 NONE
    AM1_2035 2024840 .. 2024856 -  -7.3  -4.08557   CCCCCCAAAGAAGAA              GCAATGA TGG CCATTGC              TCTCAATCGGATTTA  71 525
    AM1_2034 NONE
    AM1_2033 NONE
    AM1_2032 NONE
    AM1_2031 NONE
    AM1_2030 NONE
        avtA NONE
        rimM 2018165 .. 2018184 -  -7.8  -4.98255   GTTCAATGATAAAAA            CCGCTTTC TTGT GAAGGCGG             TTTTTTGCATCAACT  95 45
    AM1_2025 NONE
        psbM 2015161 .. 2015186 - -13.5  -4.41241   GAAACCCGCACAAAA         GTACCTAGTTA ACGA TAACTAGGTAC          TCTCAATCATCCTTT 100 65
        asnC 2009442 .. 2009484 - -28.1  -3.06492   TTAGTCATCCCAACA TCTACAAAAGCCCCGCTGA GTTAA TCAGCGGGGCTTTTGTAGA TGTCAATATCTATGC 100 40
    AM1_2018 2006036 .. 2006061 -  -3.3  -3.62096   TCGTAGGACCCGAAA         TTTTAG-CGGGC TCC ACCCGCCTTAAA         GCCGGGAGTGTCACC  53 360
    AM1_2015 NONE
        proA 2002168 .. 2002209 - -12.5  -2.87344   CACTCCTCTGACATA TCAGCATCATCGGTACA AGGTTGAA CGTACGGATGATGCTGA  TATGTCAGAGGTATT  89 39
    AM1_2012 NONE
    AM1_2011 1999393 .. 1999406 -  -4.5   -3.0263   AGCATTCTTTTAAGA               TCGCC TCGG GGCAA                TCTCTGTCAATCAAG  50 143
    AM1_2009 1997763 .. 1997776 -  -8.1  -3.66784   TCACGCCCAACATAA               GAGCC AAAA GGCTC                AGCTCACCATCCATT  68 423
    AM1_2008 NONE
    AM1_2007 NONE
    AM1_2006 NONE
    AM1_2005 1994635 .. 1994648 -  -6.7  -3.26531   GCAGGAATACCAAGA               CTGCT ATTT AGCAG                CAAGGTTACAAGCCG  57 259
    AM1_2001 1991162 .. 1991175 -  -4.5  -3.06679   AATAGGCTGAGCCAA               GCCAC ATAA GTGAC                TCAACCCGAGTGGCA  50 229
    AM1_1999 1990056 .. 1990079 -  -4.6  -3.28924   CAGTGTTTTCTAGAA          CGATATCTAG GCAT CTAGACATGG           ACTGATTTTCTCCGA  53 54
    AM1_1998 1989286 .. 1989303 -  -3.4  -4.35116   GATTGCAGAGGAAAA             TGGACA GACAAT TGCCCA              ACCGCCTTTAACCGC  63 401
    AM1_1992 1985363 .. 1985376 -  -5.3  -2.59191   GTAGATTGTGATAAC               CTTCA GTTC TGAAG                CGAGATGCGCAATGG  49 407
    AM1_1991 1984624 .. 1984642 -  -5.2  -3.69836   ATAACGAACCTTAAA             GTCTGGCA ACC TACCCGAC             ACTTTGGCATAGCTG  59 86
    AM1_1990 1983796 .. 1983808 -  -4.1  -3.07935   AGTTGATGTATCCAA                GTGCT CAA AACAC                CCACTTTGAAACAAC  49 115
    AM1_1989 1983234 .. 1983244 -  -5.4  -2.57489   GACCAAGGTAACGTA                 TCGT CTA ACGA                 CTAAACGCTTTAAAC  49 92
    AM1_1988 1982755 .. 1982773 -  -3.9  -2.84919   AGGCACTGAGAATCA             TCAGCAA ATGCA TTACTGA             TCCTCCCTGGCTTTG  45 19
    AM1_1987 1981839 .. 1981853 -  -5.6  -3.78775   CCTGGCATGATTAAA               CCATGC CAA GCAAGG               GGGCACAGACGAGGT  63 79
    AM1_1985 1980529 .. 1980543 -  -6.4  -3.14211   ATTTTGCTGGAGCAA               GAAGGC ATC ACCTTC               AATAGCCAAGAGAAA  57 74
    AM1_1982 1977071 .. 1977082 -  -5.8   -2.7083   GAGTCGATAAAGTTA                GCTG GATT CAGC                 CGAAGGCTCGCTCCC  52 11
    AM1_1981 NONE
    AM1_1980 1975107 .. 1975119 -  -7.7  -5.41143   CACCCCCCAAAAAAA                CTAGC ACC GCTAG                ACCCTGCTCTCCCAC 100 155
    AM1_1979 1974839 .. 1974852 -  -5.2  -3.21225   CGAAAAAGGACCCAA               GGGC AATATA GCCC                GCAAACGACCTAAAG  53 69
    AM1_1977 1972901 .. 1972912 -  -5.8  -3.17956   AAAGGACTCTATCAA                GCCT GCTT AGGC                 TAGGGTGGCCTTGCT  55 20
    AM1_1970 1966785 .. 1966805 -  -2.4  -3.92324   CCGTGCAACAGCAAA            CCATTGCC GAGCT GGCCAAGG            CGGTAGACTATACAG  52 175
    AM1_1968 NONE
    AM1_1967 1964215 .. 1964228 -  -4.5  -3.70109   CACAGCAGCCAACAA               CCAAG TCAT CCTGG                ATTATTGTGATGATG  57 409
    AM1_1961 NONE
    AM1_1960 1954278 .. 1954289 -  -5.8  -3.09834   CAGCTGATCATGGAA                GCGT TAAA ACGC                 CCTAATCCCCATATC  55 510
    AM1_1953 1948707 .. 1948733 -  -5.2  -3.96148   CGGGGCGATTAGAAA         CGATCTTTCGCA GTC TACAAAATATCG         AATTGTCCCAGCTTG  61 120
    AM1_1952 1946888 .. 1946898 -  -6.8  -2.87344   TAGCGCTCCTATATA                 CGCA TGA TGCG                 TGAGTCGTAGAACCT  57 375
    AM1_1951 1946158 .. 1946180 - -12.1  -3.32343   TTGATATTTCCAGAA           GCCTCCTAA TCGAG TTAGGAGGC           TTCTGTGATCTCCGC  89 136
    AM1_1940 1934195 .. 1934206 -  -5.8  -4.18018   TTGGCTTAGTGAAAA                CGGT AACG ACCG                 TCGCGGTTGTCTTAC  69 400
    AM1_1937 1931453 .. 1931463 -  -6.8   -3.4252   CTTCACTCACTATAA                 GGGA TAG TCCC                 CAATCGCTGAGTTCC  63 110
    AM1_1936 1930865 .. 1930882 -  -5.6  -2.85274   AAAAGACCTAACAAT             TGGCTA GAACCA TAGCCA              GAGACTAATCACGGG  53 30
    AM1_1935 1930194 .. 1930222 -  -3.7  -3.01912   CGATATGCAGATATA        GTTAGTGTGCCCT AAA AGGACGCACGCAC        CACATAGAAGCCGTC  46 80
    AM1_1934 1929308 .. 1929321 -  -4.5  -3.06133   GAATTTTTCAGGCAA               CCCCT AACC AGGAG                ACAGATTTAAATGAG  50 15
        rpsF 1928484 .. 1928501 -  -9.9  -2.81072   CCTATGGAACAGAAG             CCCAATC CATT GATTGGG              GGCAGACATTGGCGT  68 337
    AM1_1931 NONE
        glgC 1925057 .. 1925080 -  -3.8  -3.09834   GATCGCATCACCGAA          CATCCTGCCT TTAC AGGCACAACG           CCGCCCCACCATTGG  48 147
    AM1_1927 1922812 .. 1922825 -  -2.4  -3.31248   TAAGATTGCCCATAA               TGCT CAAAAC AGCA                GAATTCAGGTATATC  45 183
    AM1_1926 NONE
    AM1_1925 1922298 .. 1922317 -  -2.2  -2.64472   CACCCCCTAAACCGA            TCAGATAT ATCC ATATCTCA             CCCTCGTCACTCACA  40 60
    AM1_1924 1921300 .. 1921355 - -10.8   -2.9006   AACTCATTCCACACA CTCTTCTACTGCTATGCATTGCAAA GATCAAG TTTGCAATGCATAGCAGCA-AGGAC TTGTGAGCAATCCTA  77 82
    AM1_1922 1918751 .. 1918763 -  -3.5  -3.15663   ATTTATCCGTAGGAA                TTAAA ACA TTTAA                AGATTTCCCTGAGCG  48 128
    AM1_1921 NONE
    AM1_1920 1917846 .. 1917862 -  -4.3  -5.41746   AAGCGTTCAAAAAAA              GCAGCGC TAG GCATTGC              TCCGAACCTTTTATT  85 93
    AM1_1919 NONE
    AM1_1918 1916272 .. 1916284 -  -3.3  -2.97171   TATGGGAGCAAAGTA                GCAGA TCA TCAGC                GGGACAAACCTGCAG  44 54
    AM1_1917 NONE
    AM1_1916 NONE
        asnB 1911961 .. 1911971 -  -5.4  -2.89564   CCGTTATTTGACATA                 CTAC CCA GTAG                 GCAAACTTGCCAAGC  50 134
    AM1_1914 1911589 .. 1911599 -  -5.4  -3.91716   TCAGCTGTGAAACAA                 TCCA CGC TGGA                 CCAGGACGCCCACAT  63 79
    AM1_1913 1911258 .. 1911286 - -11.1  -4.44046   TTTAGCTTAAACAAA        TAGAGCCAGCATT TGG AAGGCTGACTCTA        CTCGCTTCAATATTC 100 67
    AM1_1912 1909037 .. 1909053 -  -2.2  -3.88583   GAAAGTCTTGAGAAA              TTGGCT TAATT AGCCCA              CTTGCACCTCAGCAA  51 105
    AM1_1911 NONE
    AM1_1910 1905254 .. 1905267 -  -2.4  -3.09491   GACAGACTCACTTAA               GCTT TTAGGT AAGC                ATAATTTTTATGAGT  43 8
    AM1_1909 NONE
    AM1_1908 1902865 .. 1902879 - -11.4  -3.07962   GGCGATAGCTCAACA               TCCGCG TAT CGCGGA               ATTCATTGTAGTAAT  84 77
    AM1_1907 NONE
    AM1_1906 1900532 .. 1900551 -  -2.8  -5.06052   TGAAAAAATATAAAA            GCAAGAAT CAGC ATCCATGC             TATTCGAGATTCTTG  70 378
    AM1_1905 NONE
    AM1_1904 1899140 .. 1899151 -  -5.8  -2.75064   GTGCCCACTGAAGGA                CAGC TTTT GCTG                 GCAAACTCACGCCTT  53 52
    AM1_1903 NONE
    AM1_1902 NONE
    AM1_1901 1896758 .. 1896769 -    -3   -3.7614   AATTAGCAGTAAGAA                TAGA AATA TCTA                 AAGCACACCCTATTG  53 69
    AM1_1900 1895272 .. 1895286 -  -2.8  -3.53012   CTGCTCTGGGGTAAA               GGTG GGTGGGA CACC               TGGACGCGGGGCATC  48 374
    AM1_1897 NONE
    AM1_1896 NONE
    AM1_1895 NONE
    AM1_1894 1891016 .. 1891028 -  -3.5  -2.90992   AACGCTCTGAAATTA                TTTTA TTC TAAAA                AATTATTTTATCAAC  46 47
    AM1_1893 NONE
    AM1_1892 1888523 .. 1888537 -  -2.8  -3.34716   TCATCTTGGAAAAAG               GGCT TCAGGTC AGCC               ATCTTTATGTCCATG  47 189
    AM1_1889 1884605 .. 1884620 -  -3.4  -3.18747   AAAATCAAAAAATAT              TTAATT TCTA AATTAA               CAACAAATACCCTAA  46 138
    AM1_1888 1884184 .. 1884212 -  -9.7   -4.1822   TTTTACTGCAACAAA        CCTAGATAAGCCA CGA TTACTTATCTAGG        TTTGTTGCTATATTC  88 73
    AM1_1887 1878965 .. 1878982 - -11.3  -2.81888   CCTGAAAGCCAAGGA             GACCTGG TCGC CCAGGTC              CAAAGACTGGTCAAA  74 224
    AM1_1884 1877691 .. 1877705 -  -2.8  -3.54543   ATCGAGGCGTCGAAA               TCAGCT CCG ATCTGA               TGGATGACGAAAGCC  49 284
    AM1_1882 1876171 .. 1876187 -  -5.1  -5.28176   CGCAGGTATAAAAAA              CGGCA AGCTCTA TGCCG              GGAGTTGGAGTGATT  85 147
    AM1_1877 1872043 .. 1872063 -  -6.1  -4.81082   AAGTAACCAATAAAA            TACAGCGGT TTT ACCGCTAAA            AGATCTCTATTTTGA  80 69
    AM1_1876 1863701 .. 1863711 -  -5.4  -3.93026   AACAGCTTAATTAAA                 CTAG AGC CTAG                 ACGGCTGAATAGTCT  63 22
    AM1_1875 1862549 .. 1862564 -  -3.2   -3.1355   CCGAGGGAGATTGAA              CGCAAC GATA GCTGCA               CTAATGATTTTCTTG  46 212
    AM1_1874 1861775 .. 1861789 -  -4.2  -3.25491   AAGCCACATGATCAA               GTAAGC ACG GCTTCC               GGGTGTTCAATCTGA  51 7
    AM1_1873 1860558 .. 1860580 -  -6.4  -3.34962   CGTTATACTTTATAA           CATTGTTATA GAT TATAACATTG           AGATTGAGTCCACTC  59 466
    AM1_1871 1859711 .. 1859725 -  -4.2  -3.25986   AGAGCATATGAGCAA               GCTCGA AAA TCTAGC               AATCTCTTCCACCTG  48 183
    AM1_1863 NONE
    AM1_1862 1846096 .. 1846125 - -10.2  -3.37533   GCCCAAAATCACCAA       TGGAGATTACAT ACAAGG ATGCAATCTCCA        TCTCATCAATCTGAA  78 122
    AM1_1856 1842622 .. 1842638 -  -3.7  -3.81539   ACCTAAATATTGAAA              GTATTCG CCG CCAATAC              GAAGTGAATGCCATT  55 419
    AM1_1854 1840751 .. 1840764 -  -3.1  -3.33737   TAGCAACTGTGAGAA               GAAGA CGAC TCCTC                CAAACCTTGGCATGC  47 54
    AM1_1853 NONE
    AM1_1852 NONE
    AM1_1851 1838439 .. 1838451 -  -3.4  -3.86346   CTATTTTTTTACAAA                CCTT GGGAG AAGG                ACTACAGCTGAGTCC  55 145
    AM1_1847 1834847 .. 1834878 -    -6  -3.55563   AGTTTACGGCCTAAA      CAATTTCTCTCTTT TGGG AAAGAGAAAGATCG       ATATTCCTAAACCTA  59 147
    AM1_1845 NONE
    AM1_1843 1833640 .. 1833651 -  -4.4  -2.60079   CCACCCTAGAAGTGA                TTGC CAGT GCAA                 CTTTAGCCGCGTTTA  44 192
        cobF 1832204 .. 1832214 -  -3.2  -4.30416   ACGATTAACGCAAAA                 CAGA ATT CCTG                 GGATGAGGTCTTCTT  61 65
    AM1_1841 1829426 .. 1829443 -  -2.7  -3.59979   GTCGTCGACCTGAAA             GTCTGGGC AGA ACCCA-AC             GGCACTGTACATTTA  49 393
    AM1_1839 NONE
    AM1_1837 1826704 .. 1826719 -  -3.3  -4.57341   AAGTCCTTTGAAAAA              CTACT GGGCGA AGTAG               CAACCCTGCAGCCAC  66 100
    AM1_1836 1824579 .. 1824594 -  -4.6  -2.55085   GACCTCAAAGAAAGG              CACCAG GCTC CAGGTG               ATTTCGCCCAAGCTT  46 449
        dacB NONE
        synA 1816289 .. 1816300 -  -2.2  -4.91977   GAGCAAAAGACAAAA                CGCA GTCC TGCA                 TTGGGCTTTGGCCGT  70 487
        rpoD 1814957 .. 1814985 - -11.8  -3.96148   TGTTGTCATGAGAAA        GAGGCTGCCATT TGAAG AACAGCAGCCTC        TTTCTTGATGGATGA 100 51
    AM1_1825 NONE
    AM1_1824 1809737 .. 1809752 -  -3.2  -4.26202   ATATTGAGCAAGAAA              TGGTGG GCTA CTACCA               ACAGCCTGTAGAAGT  60 101
    AM1_1821 NONE
    AM1_1820 1806323 .. 1806337 -  -9.2  -3.10444   ATATCTAAAAAATAT               CCGCCG GAT CAGCGG               CTTGAACCCGGCGCA  72 0
    AM1_1819 1805255 .. 1805281 -  -6.7  -4.41114   TTAGCAGAGAATAAA         CTTTACTGCAA CTTAT TTGCAACAAAG         TCGTCACCATACATG  76 334
    AM1_1818 NONE
    AM1_1817 NONE
    AM1_1816 NONE
    AM1_1815 1803474 .. 1803488 -  -5.8  -3.57389   AACAGTATCAGATAA               TGATAA TCA TTATCA               AATTTTCTTCACTTG  61 73
    AM1_1814 1801516 .. 1801535 -   -15  -5.08601   TGAGCTTAACAAAAA            CCGCCCTC CATA GAGGGCGG             TTATGGCAAGTGAGG 100 63
    AM1_1812 1800398 .. 1800418 -  -3.2  -3.21199   CATCTAGGAATTGAA            GGGGGTTA ATGAG CAACCCCT            CACATCAGCGATTGG  46 55
    AM1_1811 1798845 .. 1798860 -  -2.5  -3.57783   CCAGCATAAGGAGAA              GCTGC TTCGAC GCAAC               TAACAATCAGGTGTT  50 52
        ccdA NONE
        ccsB NONE
    AM1_1807 1795979 .. 1795990 -  -7.2  -3.23047   GGGACAAATTCAAGA                CCGG GTCA CCGG                 ACTCAACACCGGGGC  60 368
    AM1_1803 NONE
    AM1_1802 1792328 .. 1792341 -  -4.5    -3.322   ATCCTCATACAGCAA               CCGCA AGGA TGCAG                AAACTACGGCAGCTC  52 215
        murC 1789815 .. 1789826 -  -2.2  -4.19746   GTCATTTCAAAACAA                CCTC AGGA GAAG                 GTTTTGATGAGACCT  55 0
        murB 1788797 .. 1788811 -  -6.4  -2.62184   CTTTGCTCTAGATGA               GCTCCT CTA AGGAAC               CTCAAATCGAACTGT  54 92
    AM1_1798 1788330 .. 1788360 - -12.8  -3.18274   GCGATGGTAAGTTAA       GTTAGGATTTTGAA TTC TTCCAAATCCTAAC       TATATAGATCTTTAA  95 55
        rpsL 1787768 .. 1787785 -  -9.9   -4.1673   TAAGGGCTTAATAAA             TCCTCGA TATT TCGAGGA              ATGTATTTTTTAGAC  88 174
        rpsG NONE
        fusA NONE
        tufB 1783765 .. 1783803 -  -8.9  -2.71731   TTCAGTCCTTAAGGA  TGAGCTGAAGGTATGGCG ATAG CGCC-CGCATTCAGCTCA   TCCTTAAAGGCTGCT  66 48
        rpsJ 1783251 .. 1783263 -  -3.3  -3.20236   CAATTGAAGAGGGAA                TAGCC ATT GGCAA                CGGAAGAGGTGGGAT  46 126
         ion 1782528 .. 1782571 - -21.2  -4.90296   AAAACCTTATAAAAA GCACAAATGCGCCCGATTTA TCTA TAGTTCGGGCGCATTTGTGC TTTTGGGCAATTAAA 100 61
         lnt 1779778 .. 1779795 -  -3.4  -3.65902   CGTACCCTAGGGAAA             TGGCAA ATGATG CTGCCA              TACCTCAGTTGAAAA  51 62
    AM1_1788 1778909 .. 1778929 -  -3.2   -3.1247   ATTCGCCAGATGTAA            CCCACGTT TAATC AACGAGGA            CATCTGATCGTCAAC  46 112
    AM1_1787 1777876 .. 1777899 -  -9.7  -2.72043   AAGGTCTGGGCAAAG          CCTTGATGA AACAGA TCATCAAGG           AGTTACGGCGCGAGG  66 234
        rbcL NONE
    AM1_1784 NONE
        rbcS 1774406 .. 1774438 - -11.4  -4.83615   CACTCCTGACAAAAA     GGA-GGAGAGGTAGG TTAA CCTACCTCTCCGTTC      AGCTCAGAAAGCTAA 100 61
    AM1_1782 1773577 .. 1773589 -  -6.3  -2.87026   CATAGGGATATCACA                CCTAA AAA TTAGG                CCAACTTGAATTAAT  55 67
    AM1_1781 NONE
    AM1_1780 1770818 .. 1770836 - -14.6   -3.4647   TGGAATAGTCAAACA             CCTCCGGT AAA ACCGGAGG             CTTGGAAGAACCCCT 100 364
    AM1_1778 1770409 .. 1770419 -  -5.4  -3.53012   CGCTCTGCTCTCAAA                 GCTA AGC TAGC                 TGTTTGATTGAGCTT  57 16
    AM1_1777 1768462 .. 1768485 -  -4.7  -4.20932   AATATTTATTTAAAA          CTTTTGC-CT TAATC AGAGCAAAAG          AAGACTCACCTAGAT  63 120
    AM1_1776 1767714 .. 1767736 -  -3.4  -2.74605   GGCCCCTAAAAGTCA           TTGATTACAC CTA GTGTCAGCAA           CCCTTCAATTGGGCC  43 64
    AM1_1775 1767440 .. 1767454 -  -2.8  -3.87075   ACTATTTTCTATAAA               CACCAC ATC ATGATG               AGACTAAACAAAACC  52 29
    AM1_1774 1765833 .. 1765846 -  -4.5   -2.9058   CATTAAGAATACAAG               CAGCG TATG CACTG                GGTGAAAAGAAATAG  50 127
    AM1_1772 NONE
    AM1_1771 NONE
    AM1_1770 1760750 .. 1760764 -  -6.4  -3.23853   GGTCTCGAAGCAACA               TGCTAG AGA CCAGCA               TTTGGCTTGAGCTAA  59 177
    AM1_1769 1759649 .. 1759659 -  -5.4  -2.75975   AGTCTTGAAAAAATG                 CACA ACA TGTG                 ATCCATAGAAGAAAA  50 497
        ksgA NONE
        ispE NONE
    AM1_1751 NONE
    AM1_1750 1738339 .. 1738350 -  -2.2  -3.11208   GCGGATTTAAAACCA                CAGA AGTG CCTG                 ATTTTCTCTATGTGA  43 406
    AM1_1747 NONE
    AM1_1745 1735652 .. 1735662 -  -3.2  -4.12188   TCACCAGCGGCAAAA                 CACC ACC GATG                 CCCAAGTTTCAAGCC  58 85
    AM1_1743 1731005 .. 1731033 -  -4.5  -4.08767   TTTATGGCGTCAAAA        GACCAGCCGTC TTAGTTC GACAGCGAGTC        AAAGAAAGACATCAC  63 93
    AM1_1742 1729221 .. 1729231 -    -4  -3.64162   AGTAACTACTTGAAA                 TTAG TTT CTAA                 GAAGACTCAAAAGGC  54 377
    AM1_1741 NONE
    AM1_1740 NONE
    AM1_1739 1727905 .. 1727917 -  -3.3  -3.27667   TAGAAACGAACGGAA                GGACT CAG AGACC                TGGCCCCGACTCATC  47 17
        folC 1726504 .. 1726536 -  -7.7   -5.2422   AAGGACATCAAAAAA      CTGCAGAAAATCCTC TAT GAGAATCTGCAGCAG      GCCATGCTCGATAAG  93 85
    AM1_1735 1722916 .. 1722931 -  -7.6  -3.64487   TGAGATTGCCAACAA              GACCTT AACG AAGGTC               AAGGATGCTTTGGGT  68 55
    AM1_1734 1720233 .. 1720259 - -13.9  -4.28323   ATTAATCAACAGAAA         TGCCTTGAAGA CTTTT TCTTCAAGGCA         TTTATTAAGGATCGA 100 109
        trmE 1713781 .. 1713792 -  -2.2  -3.94746   CCACAGGCAACTAAA                CTCG CAAT CGAA                 AAATATCGCAGTAAC  53 207
    AM1_1727 NONE
    AM1_1726 NONE
    AM1_1725 1709566 .. 1709604 -  -5.3   -3.5393   ATCACTGCCCCCAAA   CAATTGGTGATCGCATC AGATG GAGGACATCACCAACTG   ATTGGGATTGATCGA  56 193
    AM1_1722 1707539 .. 1707551 -  -3.3  -3.24422   TATCCCCAAAAAGCA                TTGCC CCA GGCCA                GCAGGATCAAACTGG  47 227
    AM1_1721 1706670 .. 1706706 -  -4.6   -4.3586   TGATTCAGATGAAAA   GCTCTTGAG-GTC GAAACACGGCAA GACTCTCAAGAGC    TTTTTTATTTTTAAA  66 67
    AM1_1719 1703359 .. 1703375 -    -5  -2.60392   TATGGGCCAATGAAG              CCTGGG GCGCA CCCTGG              AGCTGGGACCCCAAA  46 258
    AM1_1716 1700980 .. 1700993 -  -4.5  -3.19091   ATATGCACCTACCAA               GAAGC CTTG GCTCC                TACTCCAGGGAATAA  51 149
    AM1_1715 NONE
    AM1_1714 1698638 .. 1698652 -  -5.7   -3.5002   CCCAACGATAAGCAA               TTGGG GCAAT CCCAA               GGACAAGTAGCTTAG  59 80
    AM1_1713 NONE
    AM1_1712 1694821 .. 1694832 -  -2.2  -4.92314   ACGAAGCGATAAAAA                CCTA TGAA CAGG                 CGATCCAACTTGACC  70 321
    AM1_1708 1691193 .. 1691209 -  -5.8  -4.09685   TTCGATCCCTTAAAA              GCCGCA GTTAT TGCAGC              AGAACCAGATCTAAT  66 173
    AM1_1706 1689270 .. 1689286 -  -2.1  -5.10461   CCGACCGAAGAAAAA              CCAGCTG AAC CCGCTCG              GACGTCCACTCGTCG  73 127
    AM1_1703 1683464 .. 1683489 - -10.4  -2.92522   CTACTTAATACCAGA         TCGGGTGCGA AATACA TCGCGCCCGA          TTGAAACAGGCAATG  76 50
    AM1_1693 NONE
    AM1_1692 1671240 .. 1671266 -  -2.2  -2.99871   GGGTAGATGAAATCA         CAACCGCTAGAA ATG CTTTAGCTGCTG         TCATTAAGCCGTTTT  42 29
        stpA 1669600 .. 1669612 -  -6.9  -2.78371   GATACCTTCAATAAT                GGCCC GAT GGACC                TCAATAGCAACCATT  54 351
    AM1_1686 NONE
        ggpS 1659468 .. 1659497 -  -6.5  -2.75074   CGCAGCCCAACATCA       CACCTATTAATTC AAAC GCTTTAATAGGTG        CAATATCGCGAATTG  55 56
    AM1_1683 1657331 .. 1657347 -  -5.1  -2.77899   TCTCTCGACGAACCA              GCCTCTA ATC CAGAAGC              AAAGAAGATCAAGAA  49 370
         rnd NONE
        recF NONE
    AM1_1674 1651802 .. 1651823 -  -2.2  -2.76261   CTCGAATGGTGAAAG           CTTCAGAG CTGCTT CCCTGAGG            AGAACGCTATCCATA  41 177
    AM1_1673 NONE
    AM1_1672 NONE
    AM1_1671 1650656 .. 1650667 -  -2.2  -4.13561   GTCTGCTAAAAAAGA                TGCA CATA CGCA                 AGATACAGCTTGGAC  55 122
        yafJ 1646248 .. 1646279 -    -3  -3.48276   CCTTTTCCCACAGAA      GAGCTTCAACTGAA AGGC CCCAATTCAAGCCC       GCCTAATTTCTCCTT  49 161
    AM1_1666 NONE
    AM1_1665 NONE
    AM1_1664 1644049 .. 1644063 -  -3.5  -3.65036   GTAACCAAAGGATAA               TCCGC CTAAC GCAGA               TGTATCGGATAATGC  53 211
        gltB 1639218 .. 1639237 -  -2.1  -3.37344   CGCGCACGTAATGAA            TTGGGAA TTATTT TACCCAA             TAAACCGTGAACCCA  45 66
    AM1_1661 1638315 .. 1638330 -  -5.4  -3.61465   CTCCAAAAAATAAAT              GGCGTCT GTT AG-CGCC              GGGTGCTTTTCAAAG  59 183
        psaC 1637966 .. 1637985 -   -10  -4.55826   GCTAAAACACGAAAA            GAGGAAGC CAAG GCTCCCTC             TTTTTAAAAATGCAA 100 84
    AM1_1659 NONE
        speA 1635545 .. 1635574 -  -9.3  -2.93073   TCTTTGGAATAATGA       CCTCTCCTCCATA TGTC TGTGGAGGAGAGT        TTTTTTGTAGTTGAG  71 99
    AM1_1654 1624387 .. 1624409 -  -3.4  -3.55444   CGCGTAGTCGTCAAA           GTACCTATAA CGT TGACAGGCAC           AGAAGCTGCAGCCCA  50 386
    AM1_1650 1619867 .. 1619881 -  -5.6  -3.09581   CAAAGTTTCAACATA               CTCGTC TCT GACGGG               AAACTACACAGCGGC  55 29
    AM1_1649 1617330 .. 1617345 -  -4.8   -3.4745   AAAAACCCATCAGAA              TTTACT TTTG AGTAAA               ACTTCAAAGAGTAGT  55 94
    AM1_1648 1615870 .. 1615881 -  -7.2  -3.61398   CTTGCGTGGTAATAA                GCCC TGTT GGGC                 GATTGCACTAATGGT  68 80
    AM1_1647 1614818 .. 1614831 -  -2.3  -4.71382   AGAACCACCCAAAAA               CAAGG CGCT CCTGG                TGAAACCATTTGCGA  67 265
    AM1_1644 1610813 .. 1610825 -  -4.1  -3.58998   ATCTAAAGGAAAAAG                CAAGA TTA TCCTG                ACCTCGACATTAATA  54 94
        gpmI 1609055 .. 1609072 -  -2.7  -3.53031   CTGACGGCAAATCAA             TAG-CCGC ACG ACGGTCTA             CCCATCCTATTGGGC  48 66
        secG NONE
    AM1_1641 1608008 .. 1608028 -  -3.9   -2.8655   CGCACTGAGAGTATA            GCCCGCTAA GGT TCAGCAGGG            GGCGCAGAAGTGTCT  45 10
        pyrD NONE
        psaK 1604404 .. 1604426 -    -2  -2.87647   ATGTAGGAGATGAGA           GGGATATT GCCATCA AAAATCCC           CGCAATCTAGCCTTT  41 100
    AM1_1636 1602944 .. 1602964 -    -4  -2.71765   ATATGTGAAAGTAAC            TCAACGAC GAACT GCCATTGA            CTATGCTCATCTACT  45 418
    AM1_1632 1601008 .. 1601034 -  -2.1  -2.87699   CAAAAGTCAAAATAT         TGGACATGGAG TTAAG CCCCGCGTCCC         CCCGATAAATCATCA  41 10
    AM1_1631 NONE
        acnB 1597305 .. 1597317 -  -4.1  -3.93658   AAGAGTGGCAAAGAA                TGCTC CGG GAACA                ATCTTGCTTATCTCT  57 470
    AM1_1627 1595328 .. 1595350 -  -5.7  -2.74286   AATAATCGCGAAGCA          TCGATTAGCA TGAT TGCTA-TCGA           ATCGCCTCACTCTCT  53 173
    AM1_1626 1594326 .. 1594337 -  -4.4  -2.91822   CAGAACAAGTCAAAT                TTGC GATC GCAA                 GTCCCTGCCGTCTAA  47 42
    AM1_1625 1594038 .. 1594057 -  -2.1  -2.59482   GAAAGGATTAATTCA            TCTAGGG CTTTAT CCATAGA             GCCTAACAGCGAAGA  40 175
    AM1_1624 1593136 .. 1593165 -  -6.6  -2.51133   TACTCACCCAGCAAC      TCCGTCCTCTGATG ACAG CATCAG-G-ACGGA       TCATCAATGTATCCT  52 504
    AM1_1620 1590450 .. 1590483 -  -8.2  -3.08679   TGGCCGGAGCCAAGA    TGGCCTTTCTCTGGGG TAAC CCCCAG-GAT-GGCCA     GTTAAACGGCACCTT  63 331
    AM1_1617 1587309 .. 1587332 -  -5.2  -4.15006   ATACTGAGGGCAAAA          CCGCCTGTCA TCAT TGGCAAACGG           ATGGTTGGGAAGGGT  66 433
    AM1_1609 1582681 .. 1582694 -  -3.1  -3.48766   GCGATAACTCAAACA               GCATGC ACA GCA-GC               AAACAGCCCAATAAA  49 494
    AM1_1608 1581884 .. 1581898 -  -2.8  -2.72028   TTGATGATAAAAACG               TTCTTC ACG GCAGAA               TTCTCTTTTAAGAAT  41 78
    AM1_1607 1581365 .. 1581378 -  -3.8  -2.78018   ATCCGTCACCAATTA               GACC ATTTTG GGTC                TCTCAGAGAAGCAAT  45 395
    AM1_1603 NONE
    AM1_1602 NONE
    AM1_1601 1577117 .. 1577129 -  -3.4  -4.08394   ATACGCCTCCCAAAA                TCGT AGATA ACGA                TGCAATGAATCAAAG  58 148
    AM1_1592 NONE
    AM1_1589 NONE
    AM1_1588 1570616 .. 1570628 -  -5.5  -3.02649   AGCCCATCATAGACA                CCACC ACT GATGG                CCACATTGCATGACA  52 361
    AM1_1587 1569599 .. 1569612 -  -4.5  -3.18383   ATGGCTATCGATTAA               CCCTG GATG CAGGA                TACGAGGCCCGGGGC  50 395
    AM1_1585 NONE
    AM1_1584 1565503 .. 1565515 -  -6.3  -2.65007   CAGTCAAGATAATAT                CTTCA AGG TGAAG                CCATACTCACTGGTA  53 458
    AM1_1582 NONE
    AM1_1581 1563534 .. 1563550 -  -6.7  -2.83409   TACGAATGGAGCAGA              TATCAAT CAG ATTGATA              GCCAAGGCAGAACGC  54 253
    AM1_1578 NONE
    AM1_1577 1558530 .. 1558573 -    -2   -3.1352   GTGGAATTCAAGATA TACCACTGTAATTTCCTCAA TAAATT TTGAGGAATTT-CA-TGGCA TTAGTCTCTTCATAA  43 183
    AM1_1576 1557795 .. 1557807 -  -2.7  -4.43844   TCATGACGGAGAAAA                TTCTA CGG CAGAA                TCGGGGCCTGCTGTC  62 233
    AM1_1571 1553879 .. 1553892 -  -3.7   -3.5764   AATCTGAGTCTTAAA               GCAGG AATG CCAGC                CATTATAAGGTGATC  53 85
    AM1_1570 1553139 .. 1553149 -    -4  -4.24002   CCTCAAAGTGTAAAA                 GAAT ATG ATTC                 ACAGGTGTGTTGCCC  61 102
    AM1_1569 1552343 .. 1552364 -  -6.6  -2.91681   TTCCAACTTGAGAGA           TGGCAACC CCTCTC GATTGCCA            ATTCTCAAAATCTAT  58 37
    AM1_1568 1551529 .. 1551542 -  -3.8   -2.7127   GTAGCTAAGTACAAT               GCAG CATTTC CTGC                TGTTTATGCCCATCG  44 264
    AM1_1564 1548493 .. 1548540 - -17.4    -4.053   AGCATTCCACACAAA CACCTCACATGATGTGTAAC-TA GAG TATATTGCACATCATGTGAGGTG GAACGGATAACAATT 100 126
    AM1_1562 1541789 .. 1541800 -  -5.8  -3.16914   AGCAGGCATTAAAAG                CTGC GGTA GCAG                 TCGTTGCTAGCTCCT  55 390
    AM1_1559 NONE
        apcA 1538699 .. 1538728 -  -9.5   -3.6682   TGCCAGGTAGTTAAA       GATTTTATCGAAA GTAT TTTCGATGAAATC        TTATTCTTATATCTT  78 298
    AM1_1557 1535218 .. 1535229 -  -2.2  -3.29511   GCCATTGCCCCAGAA                GCCA TCCA TGAC                 GCCGTTATTAATGTG  45 426
    AM1_1554 1533613 .. 1533633 -  -9.8  -5.81412   CTGAGTCAAAAAAAA            GCACACTT GAGTT AAGTGTGC            TGAATGGAGTTCACG 100 135
    AM1_1553 NONE
    AM1_1551 1531080 .. 1531101 -  -7.2  -3.28785   CTCCAAAAGAGGGAA           GGGCGACC CATACC AGCCGCCC            CAAGCTGTTCATTCA  64 71
        nrdG 1530292 .. 1530305 -  -5.3  -2.82623   TTGGTTGCACAAGGA               TGTTC AGTC GAACA                GATATTTGACCATCT  49 246
        chlB 1520943 .. 1520980 -  -7.9  -5.41143   TATCTCTCAAAAAAA   TATGCCAAGGCCGACTCA ACT TGAA-CAACCTTGACATA   TTTTCCTTAAATCAA 100 51
    AM1_1538 1520492 .. 1520503 -    -3  -4.05583   GGAAGACTAAAAATA                TTTG ATTT CAAA                 GTTCCGTATTTCTGA  56 319
    AM1_1537 1519332 .. 1519350 -  -6.6  -3.27298   GGTTCTAAGCAGGAA             CCCCCCAC TTG GTGGCAGG             AATTCTGGAAGCGCC  59 141
    AM1_1535 1517743 .. 1517758 -  -2.6  -3.29461   GAATGCTTTGCACAA              TATCTA TTTC TAGACA               CATTCATCGTTCTTG  46 44
    AM1_1534 1516576 .. 1516588 -    -2  -2.53345   GCCAGAGATGAAGAC                TTGA GATCA TCAA                AAGACCACCCACCAA  39 268
    AM1_1533 1515700 .. 1515713 -  -3.9  -3.01924   GATCTGTTGGGAATA               TCATT AACA AATGA                ATGCGTTGATATATC  46 73
        gcvT NONE
        gcvH NONE
    AM1_1530 1513441 .. 1513462 - -14.5  -4.89966   ATAGTCAAAAATAAA           GGGTGAAGG CTAA CCTTCACCC            TTATTAAAAATTAGG 100 52
    AM1_1529 1513019 .. 1513041 - -16.4  -4.81083   CTTAATCATCAAAAA           GGGCCTGTTA ATG TAACAGGCCC           CGGGTCGTTTCAAAT 100 51
    AM1_1527 1510721 .. 1510748 - -12.8  -2.52464   CTGTCCCTCAAGCCA        TGAAACCCCACC AGCA GGCAGGGTTTCA         TTAAAAAAATTATGG  90 54
    AM1_1526 NONE
        murD 1508103 .. 1508115 -  -6.3   -3.9534   ACCCACAGTTACAAA                GTTGA TTC TCAAC                ACGAAATAGTTTGGT  67 62
    AM1_1524 NONE
    AM1_1523 NONE
    AM1_1522 NONE
    AM1_1521 1505514 .. 1505526 -  -4.9  -3.15999   TGGCCATAGATGCAA                TTTTC ATA GAAAA                AATTTTTTTCTTGGT  51 133
    AM1_1520 1505176 .. 1505188 -    -2  -2.72991   GCACAGGTTTAATCA                TAGA ATTCG TCTA                ACGTCCCGACTCACT  40 97
    AM1_1519 NONE
    AM1_1518 NONE
    AM1_1517 1503232 .. 1503245 -  -4.5  -2.66522   AGTCAAGAGAATTGA               GGCCA TTTT TAGCC                TGGATTATTCATGCC  48 34
    AM1_1516 1502582 .. 1502595 -  -3.1  -4.50976   TGCCACAGCAGAAAA               GTG-CC TGA GGTCAC               GGCAGTATGTGAGAA  63 162
    AM1_1515 1502466 .. 1502478 -  -6.3  -2.89683   ATTTGATCTGAGATA                TTGAG AAG CTCAA                TGGCTATTCAAGCTC  55 29
    AM1_1513 1500223 .. 1500246 -  -5.2  -4.15006   ATACTGAGGGCAAAA          CCGCCTGTCA TCAT TGGCAAACGG           ATGGTTGGGAAGGGT  66 393
        gshA NONE
    AM1_1509 1497513 .. 1497526 -  -3.1  -4.88405   AATTCTTAAATAAAA               CCATC TAGG GATAG                GTTATGCCTCCGTAA  68 244
    AM1_1508 1495250 .. 1495295 - -29.5  -3.67864   TAATCCAATTCCAAA GAACAACGAAAAGGCCATGAA TATA TTCATGGCCTTTTCGTTGTTC TTTGAGTATTCTATG 100 48
    AM1_1507 1494795 .. 1494826 -  -2.2  -3.60818   GCAAAATTCCTGAAA      CCTATGGTGTTCCT GTAG AGGAAATCCAAAAG       GGAATCAAGAGCGGT  47 326
        mgtE 1491788 .. 1491806 -  -5.2  -2.79133   CAACCTGTTATTACA             TTCGCAAG CTG CTCGCGAC             CTATTCAGGTGAACT  49 316
    AM1_1496 1481603 .. 1481613 -  -5.4  -3.53091   ACCCTGCCTTCCAAA                 GTCA AAA TGAC                 GCTCTGGATAACCAA  57 503
    AM1_1495 1480188 .. 1480208 -  -6.2  -3.86346   GCAGCCGCTCACAAA            CAGGTTCA GTCCA TGAACCTA            GCCTTCAGTCAGGAT  65 158
         upp 1476044 .. 1476073 - -11.5  -2.73875   TGCCGTTCAAGAGGA       TCGGCAATCCACCA CCA TGG-GGATAGCCGA       CATCATCTAAATTCA  81 42
    AM1_1489 1475628 .. 1475639 -  -2.2  -3.51329   GAGGTCTAATGAGAA                GACT GACG AGCC                 TATAGCCGTTATTTC  47 40
    AM1_1484 NONE
    AM1_1483 NONE
    AM1_1482 NONE
    AM1_1481 NONE
    AM1_1480 NONE
    AM1_1479 1469276 .. 1469289 -  -2.3  -4.09739   TGAAGTTGGTTAAAA               GGCTA ACGC TGGCC                TAAAAAGTTTCCGGC  55 14
    AM1_1478 1467995 .. 1468014 -  -6.4  -3.65827   GAAGGTCGACTGAAA            GACCTAGG AAGA CCTAGTTC             CGATGGCATAAAAGA  63 192
    AM1_1475 NONE
    AM1_1474 1461105 .. 1461123 -  -2.5  -4.06502   CAGCTCCAAATTAAA            GAT-CTGA ATTT TCAGGATC             AAACGGTTATTGTCA  55 73
    AM1_1467 NONE
    AM1_1466 1454903 .. 1454913 -  -2.4  -3.28745   GCCTGAACAATGGAA                 GGTG AAT CGCC                 TTTAGTGTGAATCAT  45 27
    AM1_1465 1454605 .. 1454618 -  -8.1  -3.09516   GCTGTTATCAGTGAA               GCGGT AACA ACCGC                TCTGTTTGTTTCGTT  63 39
    AM1_1464 1454018 .. 1454044 - -15.2  -5.81412   TTCACGCAAAAAAAA         CCTCGAGGAGCA TTT TACCCCTCGAGG         CAGGTATTACTAGAA 100 84
    AM1_1463 1452897 .. 1452919 -  -4.2  -2.59298   TATGTCACACAACAT           CCATCTAG TATCTGC CTAGATGA           GTTGGGCAAAGCGTC  45 42
    AM1_1462 1451956 .. 1451966 -  -3.2  -3.82202   CATTCCCAAAGAGAA                 GCGA ATA TCAC                 CTTTTTTGGAACTTC  53 22
    AM1_1458 NONE
    AM1_1457 1447877 .. 1447925 -  -5.4  -3.53444   GGAGTTTTCTTCAAA GGTGTTGTCC-AGTATTAAAGGC ATGA GCCCTTCAGACTTAGACAACAAC CGCACCTTTAAGGGG  56 346
    AM1_1454 1445453 .. 1445473 -  -9.7  -4.87893   AATTTCAACCAAAAA            GGCCAGGAT TAG ATCCCAGCC            TTTTTACAATTAACG 100 80
        rpsA 1444355 .. 1444368 -  -6.7  -2.65409   AATTGAAGACAATAG               CTAGG ATGC CCTAG                TTTCAGCAAGACCGA  56 59
    AM1_1452 NONE
    AM1_1446 1438231 .. 1438265 - -11.9  -2.54276   ATTTCCAATCAATAT     TAAAATCTAAAATTA AAATA TAATTTTAGATTTTA     TAAAAATAGGTACAA  81 16
        chlL 1437099 .. 1437131 -  -9.9  -3.01918   TTAGGGGAGAAACGA      GATCACTGCAAGCCA TCC CAGCTCACAGTGACC      AAATGGCGATTAAAC  73 35
        chlN 1435573 .. 1435620 - -28.8  -3.68619   TCCAATGCATTTAAA TCCATAGCAAAAGTCCTCGGCA GTAT TGCCGAGGACTTTTGCTATGGC GGTCAAAGGAGAGAC 100 42
    AM1_1443 1433208 .. 1433218 -  -4.6  -2.78032   CGGCTTGCAAAATAT                 GCCC GAA GGAC                 TGGTGGTAGCCATCG  47 364
        psaF NONE
        psaJ 1430762 .. 1430773 -  -3.6   -3.1637   AGAGAGGTTGAGCAA                CCCG AATC CGAG                 CCATTTAGACTTGCG  48 76
    AM1_1438 1429108 .. 1429128 -  -2.4  -4.62783   TAGCTAGCTGAAAAA            CCCTCTGT GGCTT ACGGGGGG            TTTTTCTATGGTTGG  63 31
        gcvT 1427164 .. 1427174 -  -6.8  -2.52464   TTCCTTTTGAATGTA                 CCTG ATC CAGG                 ACACAAACAGACTAG  55 65
        purS 1426837 .. 1426861 -  -3.5  -2.61144   TGATCCTGGAAATAC          CAGCACACCGA ACT TCATTTTGCTG          CTCCCGCCGTTGGGG  44 15
        purQ 1425998 .. 1426011 -  -4.5  -2.95522   GGAGAGAAATACAAC               CCCTC GTTT GAGAG                CTGGACTATCTCCAT  50 161
    AM1_1433 NONE
    AM1_1432 1425109 .. 1425122 -  -5.3  -2.71731   TCTATTGCTTAATCA               GAGAA GTAT TTCTC                ACTCACTATGTTTTA  49 74
    AM1_1431 1424524 .. 1424546 -  -4.8  -3.38224   ACCTGACTGCAAACA           GCGCTGTCAT CAA ATCAAAGCGC           GTTTTAAGCCTGAAA  53 29
        pabA NONE
    AM1_1429 1422747 .. 1422768 -  -8.1  -4.40601   AAGTCAGAGAATAAA           GGGTAAGAGT AGC AC-CTTACCC           TACCCACAAAACCGC  79 273
        pcrA 1420211 .. 1420230 -  -2.1  -3.42182   ATCAAAAACGATCAA            GCGCATA CTTCGT TATGCTC             GTATCTCCATAACTT  47 52
    AM1_1427 NONE
    AM1_1426 1416922 .. 1416935 -  -6.7  -3.06796   GGTGACGGGAGGTAA               TGACG GTAG CGTCA                AACTCTGGGATCTGG  55 486
    AM1_1424 NONE
    AM1_1423 NONE
    AM1_1422 1410726 .. 1410736 -  -4.6  -4.57073   CACTTCGTCTAAAAA                 CCCC GAC GAGG                 ATGATTGTCTTAAAT  68 285
    AM1_1418 1404587 .. 1404603 - -10.1  -3.31853   TAAACCTAAATTCAA              TCCCAGC TAT GCCGGGA              GTAGCCGAAATTATC  75 362
    AM1_1416 NONE
    AM1_1415 NONE
    AM1_1414 NONE
    AM1_1413 NONE
    AM1_1412 NONE
    AM1_1411 1394558 .. 1394585 - -11.4  -3.18383   ATGGCCATGTATGAA        GCCGATACCCTGA AAG TC-GGATATCGGC        TCAAATTGGAGCGCG  79 203
    AM1_1407 1391299 .. 1391309 -  -3.2  -3.85209   ACCAAGTGAGAATAA                 TCCC AGG AGGA                 GGCAAGGTGTCTTAC  53 62
    AM1_1406 1388647 .. 1388661 -  -4.2   -4.4009   GTTTACTGTACAAAA               TCAAGG TAA CCATGA               TTGCAGCATAGATGA  63 87
    AM1_1405 1388387 .. 1388401 -  -2.8  -4.04397   ATGTCGATAAAAACA               CTAAAG ATA CTTTTG               CAGAAATCGCTGCAA  54 11
        murE 1386397 .. 1386407 -  -2.4  -3.67597   TTGGTGACTCAAGAA                 GGGG TCG CCCT                 ATGCCTTAATCCTGA  50 483
    AM1_1402 NONE
    AM1_1401 1382460 .. 1382474 -  -2.8  -3.26444   TTGCTGAAGAAGAGA               GGAAGT CAT ACTTGC               ACTAAAAAGATGTCA  46 62
    AM1_1400 NONE
         rpe 1380106 .. 1380153 - -25.4  -2.82895   GTTCGCACTAAGAAT CATA-AAAGTACCCCTCATCTTG AAG CAAGATGAGGGGTACTTTATATG GAATATAAAAAATAT 100 47
        fumC 1373675 .. 1373686 -    -3  -5.52384   CGTCTAGTAAAAAAA                TCAA ATAT TTGA                 GTCCCACGGGTGAGT  82 14
    AM1_1393 1372788 .. 1372806 -  -4.5  -3.45945   CTTAGCGATAACCAA             CTGAAGG AGTTG CCATCAG             AATTAGGCCAGCTCA  55 228
    AM1_1390 1370037 .. 1370049 -  -7.7  -3.93583   TAACCTATGGACAAA                GCATC ACG GATGC                CTGTGTCAACTTCGA  70 125
    AM1_1387 NONE
    AM1_1386 NONE
    AM1_1385 NONE
    AM1_1384 1363096 .. 1363123 -   -10  -4.92239   CTAAAAATGGAAAAA        GAAGCCAAACCA ATGA TGATTTAGCTTC         TTTTAAATTGTGATG 100 70
    AM1_1381 1361469 .. 1361494 -  -2.5  -3.60627   GCAGTTGAGCCTAAA         CGACGGCCAAT ATGA ATTTACCCTCG          CTGGCGGAAGTCATA  47 159
    AM1_1380 1359442 .. 1359456 -  -2.8  -3.61371   AAACGCGATCGCAAA               CCACAA TAC TCGTAG               TTGACGATTCCAAAA  49 431
    AM1_1372 1349871 .. 1349881 -  -2.4  -3.60296   GATGTGCAGTGGAAA                 GGCC GAT GGCT                 TGAGGTCTTGGGGTG  47 203
         hli 1346280 .. 1346334 - -14.6  -3.42373   GAAATAGCTGAAACA TTTAGGGTGACAGCGGATTGGACTA TCATCT CAGTCC-ATGAGCTGTCACCCTAAA GCCGAGACAAACGAA 100 67
         hli 1344967 .. 1344992 - -19.1  -4.18018   CCTCTTCATGCAAAA         GGGCAAGCAGG ATAT CCTGCTTGCCC          TTGATGACTGACCTT 100 79
        comB 1343295 .. 1343308 -  -3.1  -4.71426   TCTCTATTAATAAAA               CCAAC TTAA GTTAG                GTTGCCAGACAATCG  65 52
    AM1_1365 1342135 .. 1342163 -  -9.5  -2.76696   GTCGTCGCCAACAAG        CTGGCACTCTCTC CGG GGGAGAGCGGCAG        ATGTTGGCCATGGGC  68 348
    AM1_1362 NONE
    AM1_1361 1337921 .. 1337940 -  -2.8  -3.89822   CATCTAGTTTAGAAA            CCCCTCATG TTG CA-GAGGCG            ATTCAATATCGGACC  54 140
    AM1_1359 1335378 .. 1335412 -   -13  -2.72043   AAGGTTGGCCTAAAT     CTTCTCAAACACGCTC TTA GAGGCTGTTTGAGAAG     TTTTAGTACTCCTGC  91 28
         gsp 1333686 .. 1333728 - -24.6  -3.52668   AATCTATTGATACAA CATAAGACTTCTAGTAGTGA TTA TCACCACTAGAAGTCTTATG TTGAACTATATATCG 100 114
    AM1_1355 NONE
    AM1_1354 1331050 .. 1331066 -  -7.9  -4.63184   AATCGAGCGCAAAAA              CCCACCC TAC GGTTGGG              CCCTGCCAGGGGGGT  81 372
    AM1_1351 NONE
        lpxD 1326131 .. 1326145 -  -7.1  -3.24137   AAGGAGTTTAGAACA               GGCTG GCATA CAGCC               TCAAGGACGAAGTCC  64 113
    AM1_1349 NONE
    AM1_1348 NONE
        trpA 1324755 .. 1324766 -  -4.4  -3.11687   TCAAGCACGATGCAA                TCTC ATTG GAGA                 ATTAGGCGTCTAATA  49 27
    AM1_1346 1324377 .. 1324390 -  -3.9  -4.55689   AGGATTGAGATAAAA               CTTAT TGAG ATAAG                GATTGAGATAACCCG  65 232
    AM1_1342 1322588 .. 1322607 - -11.4  -3.53811   GTGATGGCTGGCAAA            GGGGAGAG GTTA CCCTCCCC             CTTTGCTCTAGAATT  89 33
    AM1_1341 NONE
    AM1_1340 1321596 .. 1321609 -  -3.8  -3.71378   GATTTCACATCTAAA               GCAG TGTCAG CTGC                TCACTCTGTAACCAT  53 7
    AM1_1337 1319724 .. 1319734 -  -5.4  -4.18018   TTCTCGCACTTAAAA                 TCCA TCC TGGA                 AAAAGCCAATTTCTT  66 390
    AM1_1334 1316083 .. 1316101 -  -3.1  -4.62336   ACTCTATCTCAAAAA             CTCCAAC TTTCT GTTCGAG             TCCCCTCGCTTGTTC  65 77
    AM1_1333 1315514 .. 1315528 -    -5  -3.25479   CCATGAAATATCCAA               CCTAAA GGT CTTAGG               AGATCAGAGTTCCAG  50 265
    AM1_1322 1307177 .. 1307194 -  -4.8  -3.53224   TATGTTTGGGGCAAA             GCTACC AGATAA GGCAGC              GCTGGCAATCGTCGA  55 114
    AM1_1321 1306524 .. 1306538 -   -10  -2.64333   CTGCAAAAGTAATAC               CACTGC AGG GCAGTG               CCCGCGAGAAAACTG  71 155
    AM1_1319 NONE
    AM1_1318 1303898 .. 1303924 - -18.2  -3.61404   TGAGTAATGAGAGAA         GCTAGAGGTCAT AGT ATGACCTCTAGC         TAATCAACTCACTTG 100 34
    AM1_1316 NONE
    AM1_1315 1301349 .. 1301361 -  -6.3  -2.62983   GCGACTGCTATACCA                TCCTT TTG AAGGA                TCGTCGTTTCTAGCT  54 212
    AM1_1313 1298838 .. 1298848 -    -4   -3.7764   AAAAACAAAAATATA                 TTTC CTT GAAA                 CCTATACTCACCAAG  55 248
    AM1_1310 1296205 .. 1296225 - -11.1  -4.51799   ATTAAAGTGATAAAA            GAGGGACAG ACC CTGCCCCCC            TGGTTGTGAAGAGAG 100 234
    AM1_1306 1291788 .. 1291809 - -14.5  -3.58343   CCTACTACCTCTAAA           CGGCTCTTC GGTG GAAGAGCCG            TTTCTCTTTATATAC 100 345
    AM1_1303 NONE
    AM1_1302 1289562 .. 1289573 -  -4.4  -2.66733   TGCCAAGCTACAGGA                CTCT CAGC AGAG                 GAATAAAGTTCTACA  45 514
    AM1_1294 1285370 .. 1285381 -  -3.6  -3.70919   CCTAAACTGCAACAA                GCCG TCAA CGAC                 TCTCAAACCCAGCTC  53 205
    AM1_1289 NONE
    AM1_1288 NONE
    AM1_1287 1279981 .. 1280009 - -12.6  -3.90002   GAGGAAACCAAAACA       GGTGTACAGC-GA TGGT TCAGCTGTACACC        CAAACTGCAGAAACT  93 357
        hemN 1276263 .. 1276312 - -10.4  -3.47573   CCACCTAGACGACAA TGTTTCCCCAGCCCTTGAACAATA CCTC TACT-CTCAAGGACTGGG-AAACA GCTTATGGATCTAAA  80 28
         hli 1271834 .. 1271858 - -15.9  -5.64274   TTACCTACAAAAAAA          TCTGCTAGTTC TAG GAACTAGCAGA          TTATAAATTTTTAGA 100 55
    AM1_1277 1270054 .. 1270066 -  -4.1  -3.90588   GATGGCTGAATCAAA                CACTT TTG AAGCG                AAGACTTTCCAACCT  57 39
    AM1_1271 1259071 .. 1259083 -  -4.1  -4.17762   TATCCCTTAAAAGAA                GCTCT AGT AGAAC                AAGTTATTTGGGATG  62 382
    AM1_1269 NONE
    AM1_1268 1255632 .. 1255642 -  -6.8  -3.20227   TTCCAATCAGCAATA                 CACG AGA CGTG                 TGCACGCAGAATGGC  59 524
    AM1_1267 1254312 .. 1254327 -  -3.2  -3.52341   ATCGCAACAGTACAA              CGCCAA TCAG TCGACG               ACAAGGCACCCCATT  49 39
    AM1_1266 NONE
    AM1_1265 NONE
    AM1_1264 1252129 .. 1252139 -    -4  -4.58395   CTGATCGCCCAAAAA                 GAAT CCC ATTC                 AATCCAGGTGGAGCA  68 214
    AM1_1262 1246941 .. 1246955 -  -2.8   -3.6215   TGAATTTACCCCAAA               TGCAAA GGA TTAGCA               TCTAAATGTGCTAGA  50 1
    AM1_1261 1245705 .. 1245715 -  -5.4  -4.13872   ACTGAATTATACAAA                 GACT CTT AGTC                 CTGGAGCCAGAATGC  66 486
    AM1_1259 NONE
    AM1_1258 1242987 .. 1243003 -  -3.7  -2.62983   TCTATTGCCACATCA              GAAAACA TCG TGGTTTC              TGATCAGAACTTGCT  42 148
        rpsM NONE
        rpsK 1237514 .. 1237532 -  -2.4  -4.08767   TTGAGGTCTGCAAAA             GCAAAGTT TTT AACTTCGT             TGATGGATGAGGTAT  55 126
        rpoA NONE
        rplQ NONE
        truA NONE
        rplM NONE
        rpsI NONE
        rpmE NONE
        prfA NONE
    AM1_1246 1232130 .. 1232164 - -14.3   -5.0133   GACTGGGCTAAAAAA     GCGCCAACCCTGCCC AGTTA GGGCAGGGTTAATGC     TCTCAAGATTAATTG 100 46
    AM1_1244 NONE
    AM1_1243 1227890 .. 1227941 -  -6.1   -2.7386   AACCTAGTCTAAGGA TG-CATTACCCCAAGGCTAATCC ATTAACTA GGAACAGCCTTGGG-CAATGTCA ACCGTTTTTATAGCT  55 108
    AM1_1241 1226278 .. 1226294 -  -3.7  -3.90316   AGTTGGCTAAAAACA              GCTAG ATTGTTG CTAGC              TTACCTATCCAATTC  56 39
    AM1_1240 1225785 .. 1225796 -  -2.2  -2.54371   TCCGCCAAACAAAGT                CTGC GCCT ACAG                 TAGAAAAACACCACT  39 47
    AM1_1238 1225032 .. 1225044 -  -4.1  -3.14602   GCGATGGCAGCAACA                TCACC CTT AGTGA                TCCAAACAATCTGCT  48 122
    AM1_1237 NONE
    AM1_1236 NONE
    AM1_1234 1211877 .. 1211891 -  -4.2  -3.34104   GGAGAATTAGATGAA               CTCGAA ACC TTCGTG               GGCCAAAAACGCAAC  50 361
    AM1_1233 1210705 .. 1210716 -  -4.4  -2.92389   TAATTCATTTATACA                GACA GGTC TGTC                 TATTGTCAAGAGATG  47 249
    AM1_1232 NONE
    AM1_1231 NONE
    AM1_1230 1208490 .. 1208500 -    -4  -3.85698   GTGGGTTCTTAGAAA                 GAAA GTT TTTC                 TCATGAATTACTGAG  57 33
    AM1_1229 1207645 .. 1207664 -  -5.1  -3.21153   ATTAACAATGCAATA            CAAATCA CATTAT TGATTTG             AATTTATTTTACTGC  53 195
    AM1_1228 1206616 .. 1206638 -  -3.4  -4.21462   AGTCATTACTGAAAA           TTGCAGTCAT AAA ATTCCTGCAA           CCGTAAGACTGTCTA  58 130
    AM1_1225 1205553 .. 1205566 -  -5.3  -4.58466   TGTATAATCATAAAA               CAACA ACTT TGTTG                TTCAACACCATCATA  73 66
        sufB NONE
        sufC NONE
        sufD NONE
        nifS 1200618 .. 1200632 -  -2.8  -3.37344   TTTGGACGGAAGCAA               CCATAG GAG CTACAG               CTCACTGGCGCTTAT  46 37
    AM1_1220 NONE
    AM1_1219 1198800 .. 1198814 -  -8.6  -2.77899   CTCCCCTATTAACGA               TGAGGA TGC TCCTCA               TGTTCATTGCCTTGA  64 4
    AM1_1218 1198206 .. 1198218 -  -3.4  -3.65199   AAGTTGTTATTTAAA                CAAC TTTTT GTTG                TTACTCAACGACAAG  51 413
    AM1_1217 1196396 .. 1196410 -  -5.6  -3.04792   CGACTACGGTGAAGA               CCTGGG AGA CCCACG               GTACGGTGTTATGTT  54 382
    AM1_1215 1195612 .. 1195634 -    -7   -3.7347   CTGAAGATTGAACAA           TGCGATGGTC TCT AACTATCGCA           TTTTCTTTGACAAAC  65 203
    AM1_1213 1193586 .. 1193598 -  -7.7   -3.9398   TCACAAGGCTATAAA                TCCCT ACT AGGGA                TACGTTGTAAGGAAT  74 323
    AM1_1212 1192071 .. 1192091 -  -5.4  -4.15565   GTGATTAGGGCAAAA           CAGCG-CGC TGCA GCGGCGCTA            GAGTTTGATGACAAA  66 424
    AM1_1208 NONE
        rpoE NONE
    AM1_1206 1187857 .. 1187875 -    -3   -4.4767   GCAGTGATGACAAAA             CCCTCCGA CTC TGGGAGGT             CGATACGGGTAAATG  62 214
    AM1_1203 1182868 .. 1182887 -    -5    -3.615   ATGGTTAGATAAATA            CCAAAAAC TTAT GCCTTTGG             TGTATTTATTGTATG  57 396
    AM1_1202 1180245 .. 1180284 -   -10  -3.26649   ACATTTGTACATGAA  TCAGGAGAGCACCCTCAA TTAC TCGTGGTTACCCTCCTGA   TTCGGCAATAGAAGG  76 343
         tpm 1177839 .. 1177869 -  -2.4  -3.85114   AAATCTCAGACCAAA       CCCCACCCCAAATC GCA GACATGATGTGGGT       TCATGATCGCTGTGT  52 56
    AM1_1197 NONE
    AM1_1196 NONE
        nthB NONE
        nthA NONE
    AM1_1193 1173304 .. 1173314 -  -3.2  -2.59742   GCTAATGCTTACAAT                 CCAA CAA CTGG                 GCCAGTTGAGCCTCT  42 1
    AM1_1192 1172514 .. 1172539 - -17.7  -3.56704   TCCGTATCAAATCAA         GAACGCCGTAG GATT CTACGGCGTTC          TCTCGATTTAAATCA 100 76
    AM1_1189 NONE
    AM1_1188 1169717 .. 1169728 -  -2.2  -2.92026   GATCTGAAGAGGATA                CCGT GTTC ACAG                 TCCGCAAAATCTCCC  42 131
        ligA 1167580 .. 1167591 -    -3  -3.96483   AGGCTATCCAAACAA                TTCA AGAT TGAA                 GAGATCGAAGGGATA  56 133
    AM1_1184 NONE
    AM1_1183 1148246 .. 1148266 -  -2.5  -4.70879   GCCAAACGGCAAAAA            CTCAATCGT CGC AAGTTTGAG            GTGATAGAGGCAAGG  64 235
    AM1_1180 NONE
    AM1_1178 1145339 .. 1145360 -  -4.5  -4.23999   GTATACGCAAAACAA           CATGCGAGAA CGA CTCTC-CATG           CGTAACTTTATGGAA  64 145
    AM1_1172 1140854 .. 1140867 -  -8.1  -2.73243   AGCGAGGGCTTAAAG               GGGCA TTCT TGCCC                TATGTGATTCAAAAT  58 99
    AM1_1171 1138747 .. 1138758 -    -3  -2.82152   AAGAATCAAAATTTA                TGAT GCTG ATCA                 ACCGTCAGTACATCA  42 502
    AM1_1161 1128241 .. 1128258 -  -5.5  -3.45324   GATCGGCATTAAACA             CACCCCT AATA ATGGGTG              TCTAAAGAGAAGGCC  57 252
    AM1_1160 1127419 .. 1127431 -  -3.3  -2.52464   TGTCTTTGTAATTGA                TGCAG GTA CTGCG                CTTACCTATACAGGC  42 448
    AM1_1157 1125081 .. 1125094 -  -6.7  -2.64472   TAGCCCTGAAATTTA               TTCGG GCAG CCGAA                CGTCAGCTCGTGCTT  53 177
        cdsA 1123652 .. 1123669 -    -2   -4.8384   TAAATAAGTCAAAAA             TAGAGCC GGTAT GGC-CTA             CATAAGCCTTCTATC  66 101
    AM1_1151 1118780 .. 1118790 -  -6.8  -4.24002   TTCTAAACCTTAAAA                 CCTC CTT GAGG                 TCTTCTCAGTTTCTT  71 511
    AM1_1150 1117042 .. 1117055 -  -4.5  -2.50511   TCCACAAGTTAACAC               CCACC TCTA GATGG                TCAATCCCCGTAAAT  47 74
    AM1_1149 NONE
    AM1_1147 1115090 .. 1115101 -  -4.4  -4.07568   TCGGGGGGGTGAAAA                CTCT CAAC AGAG                 CTATGAGTTCACTTC  60 459
    AM1_1143 NONE
        hrcA 1111290 .. 1111335 -    -5  -2.95339   AGAAAAGGTCAGAGA TCTTC-GAAAAAAAGTCA-GCG ATGC CACCTGACTTTTTCTCAGAAGG TCATATTTATTCTAA  50 56
    AM1_1140 1110951 .. 1110972 - -13.1  -5.54264   AAATAGCCAAAAAAA           GAGAGGGAA ATAT TTCCCTCTC            CTCAAGAGCGTTGGT 100 58
        aroC 1109742 .. 1109753 -  -5.8  -3.42147   GCGAATCAACAGCAA                TCGC ATGG GCGA                 TGTAATTCCAACAAA  59 42
    AM1_1138 1108612 .. 1108650 - -13.9  -2.60075   TTTTTCGCAATGAAG   TGGCAGGATGGTTATCC GATGG GGACAGCCATCCTGCCT   GCAAGCGGCAAGGCG  88 460
    AM1_1133 1105330 .. 1105344 -  -2.1  -4.88293   AATTTCAAAAAGAAA               GTGCA TGCAT TACAC               CCTATAGAGCGAACT  66 332
    AM1_1132 1104930 .. 1104947 -  -4.7  -3.76413   TTGCAAAATTGCAAA             GGGGTAG CGAT CCGCCCC              TCTTGCCTGAACCCA  59 42
        psbE NONE
        psbF 1103431 .. 1103459 -  -7.5  -6.19302   ACAGAAGAAAAAAAA        GACACCCCCTT CTGCCTC AAGAGAGTGTC        AAGCTAGCGTCGTTT 100 49
    AM1_1128 1103028 .. 1103041 -  -2.5  -4.15565   TCGAGGATCCTAAAA               TAAAA GGCA TTTTA                GTGTTTCCCCTATCC  57 260
    AM1_1121 1097898 .. 1097913 -  -6.2   -3.1552   TTGCACTTATCAACA              TTCAGT TCAG ACTGAA               TATTATTATTTTTAG  57 379
    AM1_1119 NONE
        glgA NONE
    AM1_1117 NONE
        uvrC NONE
    AM1_1115 1092701 .. 1092713 -  -2.7  -3.48292   ACTCATGAGTAAATA                CCTTT GTT AAAGA                GAGAAGTGAGTGACC  48 270
    AM1_1114 1092325 .. 1092350 -   -14  -3.74158   GGAAGTAGACGGAAA         CGCCGGATGC TATATT GCACCCGGCG          ATCGCGTACGTGTAA  95 172
    AM1_1109 1086607 .. 1086618 -  -5.8  -3.53012   GCTGTTGGGTTGAAA                GCAG AGGA CTGC                 AGCCGCTTCTGATAC  59 53
        menD 1084441 .. 1084471 -  -9.2  -3.03701   TTGGATGAAATCACA       CTTTAAGTTGAATA TTA CATTCAACTTAGAG       AATGTCCTTCTGAGA  71 347
    AM1_1107 NONE
    AM1_1106 1082786 .. 1082797 -  -5.8  -3.16191   TTACACCTCCATTAA                GCGT TAAC ACGC                 TGTAAGATTTCTTCG  55 10
    AM1_1105 1082235 .. 1082250 -  -3.2  -3.73936   AAAGGCCATCAATAA              GACATC ACAA GCTGTC               TTTAGGATGTAGAAG  51 75
    AM1_1104 1079983 .. 1079998 -  -5.4  -2.78679   TTCCTCTATGGAAAC              GGCTGA AGAT TCAACC               TGCTCGATAGGAGCA  50 131
    AM1_1103 1078093 .. 1078111 -  -6.6  -3.01791   ATGCTCCTGTTAAGA             CTCAGCGG CAA CCGCTAGG             GGAATATTGGCTGAT  58 1
    AM1_1101 1074773 .. 1074783 -  -3.2  -4.13963   ATCGCCCAAAAAACA                 TCCG GCC CAGA                 ACGAGCAGTCATTAA  60 166
    AM1_1100 NONE
    AM1_1099 1072940 .. 1072959 -  -3.6  -4.46155   TATACAGCGATAAAA            GATTGATA GGGC TATCTATC             AACGGGAACTCACTT  65 115
    AM1_1098 1071622 .. 1071643 -  -8.1  -3.05935   AGACGGGGTATGGAA           TACGATTTG CTCC CAAACCGTA            GATTTGGATTACAAT  60 106
    AM1_1093 1067731 .. 1067780 - -17.9  -3.46081   TAGTGAATTAATTAA CGCCAGCACGCTAGCTTCAGCCT GAGA ATGCGGAAGCTAGCGTGCTGGAT TAGATATAAGCAGAG 100 47
    AM1_1091 1064001 .. 1064011 -  -4.6  -2.57013   TTGGAAGGCAATTTA                 GCGG CAG CCAC                 CTCAACGGGGGGCAT  46 374
    AM1_1089 1060255 .. 1060267 -  -3.3   -3.4052   TGGTAACTCAAGCAA                CCCTA AAT TCGGG                CAGGTTCCCAATCCG  47 15
    AM1_1088 1059227 .. 1059239 -  -2.7  -2.88737   TAATCACTAGCAAAC                TCTAA CAA TCAGA                TAAAAAATTTTGATT  42 118
    AM1_1086 1056332 .. 1056343 -  -2.2  -2.71681   GAACCTTCTGAAGTA                GCCT AGTT AGAC                 CTGTTCCCTTTCATC  40 16
        ycf4 1049381 .. 1049395 -  -4.2  -3.85698   TTTGGGTTTTACAAA               CCTTCC ATG GGAACG               CCCAAGAAACGAGCG  57 4
    AM1_1081 NONE
    AM1_1080 NONE
    AM1_1079 NONE
    AM1_1078 NONE
    AM1_1077 1045457 .. 1045473 -  -5.1  -4.21676   ATAAGCGAGGCAAAA              CCCTTCA CCC TGAAGGT              TTAATGCGTCAAGCT  66 155
    AM1_1075 NONE
    AM1_1074 1043707 .. 1043720 -  -2.4  -3.86916   CAGCACTACAGTAAA               TCAG GAAATA CTGA                GAACTGTGAAAAGTT  51 130
    AM1_1073 1042274 .. 1042307 -  -6.8  -2.83715   CTCATTAGGACGATA     TTTCCCTGCCAACC ATTACA AGTCAGCAGGAAAA      TGGGTATCGTTGACG  57 192
        nadA 1035347 .. 1035386 -  -4.4  -3.53444   GGATGTTCTCCCAAA  CTGTACTAG-CAGAATACC GTG GTTATTCTGCCCAAAACAG  CGTGATTTCACTTAT  52 55
    AM1_1067 1034808 .. 1034828 -  -3.9  -2.89742   TGGAATTGGTAGACA            CGCACGC TTGAGGG GCGTGTG            GCTTATGCCTTGCGA  45 95
    AM1_1065 1032929 .. 1032940 -  -2.2  -3.53012   GGGTTGGGCTTGAAA                CCCA TTTT TGAG                 GAACTCAATCAGCCT  47 501
    AM1_1063 1030805 .. 1030821 -  -4.4  -3.69283   CAATCGACTGAACAA              TGCAGC AGCAA GCTACA              TGAATTGATCACCCT  54 181
         map 1029857 .. 1029872 -    -4  -3.91434   AAAGCAGTTCAGAAA              TGCGAGT GGG AC-CGCA              CAATCAATTCCTAGG  59 80
    AM1_1061 1028378 .. 1028398 -  -2.5  -2.64155   TCTGCCTCAAATCTA            GCTCATGAA AAT TTGAAGAGC            AATATTTATTTTGTT  39 266
    AM1_1058 1027324 .. 1027345 -  -2.1  -3.70902   CTGGCCACAGGCAAA           GCTGAAGTG GTTG CTCACCAGC            AACAGCCTCCTGCAT  50 434
    AM1_1057 1025924 .. 1025948 -  -5.7  -2.57344   TATTGTGCCCAGAAC          GGGTTGGCATT CTC AATTCCAACTC          AACTCTTCTCCTAGA  52 93
    AM1_1056 NONE
    AM1_1055 1020165 .. 1020178 -  -3.1  -2.75294   TGAAAGCGGGCAAAT               CTCCA AAAT TAGAG                CGCACGGGTTACAAA  42 487
    AM1_1052 1017764 .. 1017776 -  -5.5  -3.48288   TAATGGAGAGCATAA                GGCGA AAC TCACC                ACCTTACTATCACTC  56 109
        leuS 1004133 .. 1004145 -  -5.5  -3.29324   CGGATTCAAACCCAA                GTCGG TTC CCAAC                CCTATGCCCTGCTGG  54 460
    AM1_1035 NONE
    AM1_1034 1003241 .. 1003252 -  -5.8  -3.93369   GCAACCTCAATCAAA                CTGC GATC GCAG                 ATCAATAACTCCCAT  66 168
    AM1_1032 NONE
    AM1_1031 1001332 .. 1001343 -  -4.4  -4.71426   TTCCCATGAATAAAA                GCAA TGTA TTGC                 ATGTCTGAATATTGC  68 236
    AM1_1030 1000664 .. 1000674 -  -2.4  -3.79251   TACCTTAGCACTAAA                 GGCC ACA GTCC                 CTTTTATTATTAGCC  52 409
    AM1_1024 NONE
    AM1_1023  991626 ..  991641 -  -2.6  -2.71001   CAGTTTCAAACCAAG              GCT-GAA GTA TTCTAGC              TGACAGTGTCCAGCC  41 137
    AM1_1022 NONE
    AM1_1020 NONE
        chlG NONE
    AM1_1018  988768 ..  988797 - -13.8    -3.524   GATCCATTCACACAA       TAAGCTCTGGTA GACAAA TACCAGAGCTTA        TTAGTTACAAGATTG 100 73
        psbZ  979000 ..  979014 -  -2.8  -3.90761   GAATCTAGATAACAA               CAATAG AGG CTAATG               CAGCTACGAATAGTA  52 0
        ribH  978275 ..  978290 -  -3.3  -3.10244   TCTGTCAATAAATTA              GGAAT TATTGG ATTCC               GACTTTAAAGCGTTA  46 7
    AM1_1007  977616 ..  977642 - -15.2  -3.60475   AAGGCCGAGGCGAAA         CTCCCGCCTTAG AGC CCAAGGCAGGAG         CGATGGGAATAAGAC 100 49
    AM1_1006  976163 ..  976185 - -10.6   -3.6106   GCCAAGAGCTCGAAA           CCGCTTTAGG GGT CCCAAAGCAG           CGAATCTATATTGAG  77 117
    AM1_1004  975033 ..  975044 -  -5.8  -3.30771   GGACATTGCCCATAA                GGTG TTGT CACC                 GGATACTTACAGCTG  57 342
    AM1_1000  973415 ..  973437 -  -2.7  -4.32034   GCAGGAGCACTAAAA           CTTCTCAAA CAGCC TCTGAGGAG           ACTAAGCGGACAAGC  59 7
    AM1_0998  971414 ..  971430 -  -3.5  -2.94194   TAGAAATGGTAGATA              GCTGGGC AAT GCCCCGT              TTGCGCGAAGTGATG  45 216
        kaiA NONE
        kaiB NONE
        kaiC  964600 ..  964614 -    -7  -3.33696   GCTCTGTTCAAGCAA               GGCCAG CTT CAGGCC               AGTCAGCAAGCTTTC  62 153
    AM1_0988 NONE
    AM1_0987  959740 ..  959756 -  -2.1  -3.17146   TGGGGCTAGAACATA              TCGGCAG GGT CAGCGGA              CTGGAGTTTCCGAGT  43 18
    AM1_0986  958657 ..  958673 - -10.9  -2.71731   CCTATGGTGCAAGTA              GCAAAGG GTG CCTTTGC              TTGGTTAAAAGATGA  72 349
    AM1_0980 NONE
    AM1_0979 NONE
    AM1_0978 NONE
    AM1_0977 NONE
    AM1_0976  950815 ..  950831 -  -2.2   -3.4404   AACAAAAGGCTATAA              GGTTTC GCCCA GCAACC              ACTCAAAGCCCGCGG  47 3
    AM1_0974  950008 ..  950019 -  -2.2  -3.14132   TGCGCCTTGTATTAA                CGAC ACTA ATCG                 GTAGTATTCCTGTGA  43 66
    AM1_0969  943776 ..  943790 -  -8.6  -3.81146   TCCCCCAAGGAAGAA               TGCCAA AAT TTGGCA               ACATGGAAACTGCAA  73 314
    AM1_0967 NONE
    AM1_0964  938899 ..  938939 -  -3.3  -2.76696   TCTGTTCGTAATAAT TCCCCGGTCAGTAGTTTG GTCTAA CAATCT-CTGACCAGGAT  TGTCAAGGTCTAATG  43 94
        uppS  937942 ..  937952 -  -3.2  -2.85712   CGATACCCAGAAGCA                 CGAC AGT ATCG                 ATGATGAGTTCAATA  43 124
    AM1_0958 NONE
    AM1_0957  930526 ..  930546 -  -4.6  -5.24129   TTTGCTGAGAAAAAA            GTGAGCCG CTAGT CTGCCCAC            GGAAACCGAAGGATT  80 39
    AM1_0954  929273 ..  929284 -  -3.6  -3.78597   ATTGAGCAAGTCAAA                GCAG AAGT CCGC                 CCCGACCAAAAAGCT  53 434
    AM1_0951  920132 ..  920156 -  -6.3  -2.78384   CCTGTTTTGATGAGA          CCCATGCCCTC AGT GAGGCCCTGAG          CGCCATCCAGGATGT  54 366
        gapA  917540 ..  917568 - -12.5  -5.75342   CGTTCCCAAAAAAAA        CACTCCCCCAACC ATT AGTTAAGGGAGTG        TGGCATAAAGCAATG 100 51
        murA  910691 ..  910727 -  -9.5    -4.564   AAGCCGAAACCAAAA    TCCCAGCCTCGAGAT CATGAGC ATCTTGATGCTGGGA    CGGGTTAAAGTCGAA  95 47
    AM1_0937  906201 ..  906213 -  -3.4  -3.17075   GTTCGCTGAAGGGAA                TAGG CCTTT CCTA                TTTCTAACATTCGTA  46 250
    AM1_0936 NONE
        cysE NONE
    AM1_0934  903499 ..  903509 -  -6.8    -3.727   CGGATTAGATGCAAA                 TGCC CAA GGCA                 AGACCCTAGAAGTGT  63 122
    AM1_0927 NONE
        smpB  894757 ..  894775 -  -4.6  -2.71263   AAGTTGTGGCAACTA             CAGATTAA TCC TCAATCCG             GCCAAGTCCTGCACA  46 454
    AM1_0923  890361 ..  890382 -  -7.3  -4.39318   GAATGAAATTCAAAA           CAATTCCCT AAAA AGGGGATTG            CACTGGCATTTTTTT  75 78
    AM1_0922 NONE
    AM1_0921  889577 ..  889603 - -12.4  -3.63589   TAAAATACCGTCAAA         CATACCCGACTA TTT TAGTCGGGTATC         ATGGAAACGACTTCT 100 39
        thrC  888183 ..  888193 -  -4.6  -3.16146   AGAAACAAATGAAAC                 GACG AAC CGCC                 TAAACCAGCACAGGT  51 25
    AM1_0919 NONE
    AM1_0918  887397 ..  887427 -   -17  -3.11316   TCACTATTCAATATA       GAAAAGCGGCTGTC GAT GACAGCCGCTTTTT       AATTCCGAAAATCAT 100 61
    AM1_0916  884592 ..  884610 -  -3.8  -3.55783   AAAATCCAAGCATAA             GGAGAAAA TAG TATCCTCC             TAATGATGTCTTGGA  51 197
    AM1_0915  884050 ..  884064 -  -5.6  -3.72695   ATCTTCGGCAGCAAA               GGCTCT AGA AGCGCC               TTCCCCCTTGGAAGC  59 424
    AM1_0911  877142 ..  877155 -  -2.4  -3.78934   TCGCCGTTACAAGAA               GGAT TAGGTG ATCC                TTATCTCAAGTTGCG  50 506
        leuD  873023 ..  873035 -  -3.3  -4.15543   TAAAGATTGGCAAAA                CCTGG AAA CCATG                GTGCGATCGCAACCT  60 40
    AM1_0899 NONE
        leuB  867406 ..  867432 -    -3  -3.65046   CGGGCATTGCAAGAA        TC-AGCCGCCA GTGAAT TGGCTGCTCGA         ATGACTGCGATGAAC  51 220
    AM1_0889  860543 ..  860562 -  -2.8  -3.99228   ACAGGAACTTAGAAA            CAG-CCAGA CTA TCGGGGCTG            GTCAATAAACTTAAA  54 14
    AM1_0888  858806 ..  858823 -  -6.3  -2.92777   TTCGAGATATTAAAT             TCTTGCC TGGT GGCAAAA              CCTTGATGACAGTAT  56 385
    AM1_0884  856156 ..  856182 -  -5.3  -2.91264   CTTGCCATCGAGAGA        GTGAATCT-CCT CTCC AGATAGATTCAC         TCTCTCCGTCCTGCA  52 264
    AM1_0882  855649 ..  855665 -  -2.1  -2.56596   GCGGTCATTAACCTA              GGAGCGA CCA CCGGCCC              AAGTAACCCACCGAC  39 6
    AM1_0881  854564 ..  854576 -  -9.1  -2.58714   CTCTAGATGAACTCA                CCCAG GAG CTGGG                CTTTGGGGAAGAAGA  66 337
    AM1_0875  850971 ..  850991 -  -8.3  -3.61715   GAGGGCGTTGAACAA            GGCGTTG GAGCGGG CAACGCC            TGAGATTCACCATTC  71 508
    AM1_0869  848359 ..  848369 -  -5.4  -3.52906   TCACCTGTAGAAATA                 CTCT AAC AGAG                 ATGATTTTCAGCAAT  57 73
        ureF NONE
        ureG  846321 ..  846333 -  -4.1  -3.14344   GATGCCTTTCATCAA                CAATG TGG CATCG                CCAGGGGTAGGTATA  48 274
    AM1_0864  842117 ..  842130 -  -2.3  -2.98381   GAAGTGAGCAAAGCA               TCTCC TTAT GGTGA                CAGGGTTGTTGATAA  42 54
    AM1_0863 NONE
    AM1_0862 NONE
    AM1_0861 NONE
    AM1_0860  838255 ..  838265 -    -4  -2.75528   ATGGGTAAGATAGCA                 TTTG TCT CAAA                 CAGTACGGCCTAGTC  46 55
    AM1_0859  837096 ..  837114 -  -6.6  -4.56914   TCACCCAAATCAAAA             CCCTACCC GCA GGATCGGG             GGTGAGCTATAACCA  77 426
    AM1_0856 NONE
        nagA NONE
    AM1_0854  832711 ..  832735 -  -9.4  -3.53012   TTTTCTGGCTTGAAA         TCAGC-ATCGC AGAA GCGATTGCTGA          CTTTTCTGCAGGAAG  71 229
    AM1_0852  832187 ..  832201 -  -2.8  -3.61764   GGATCAATCTTTAAA               GATTGT GTT ACACTC               TTATCCCAATACGAC  50 65
    AM1_0850  831035 ..  831048 -  -2.3  -3.64703   TGTTCTTGAGGCAAA               CGAGC GCTT GATCG                CTTCCATCGATCAGC  50 65
        mraW  829371 ..  829385 -  -7.2  -2.78816   TCAGTGGTTACCACA               TGCATT ATA AATGCA               TAAATTCATAATTGT  59 167
    AM1_0848 NONE
    AM1_0847  826855 ..  826875 -  -8.3  -3.61398   GGGCTCTGGTAACAA            CCTTCCCAC TTA ATGAGAAGG            TTGTTATTTTGCTTT  73 109
    AM1_0846 NONE
    AM1_0845  825607 ..  825626 -    -5  -3.64703   TTGTCTGTACGTAAA            GGCTCA-TG AAG CAGCGAGCC            GTGATGGGAATCTCA  57 121
    AM1_0842  823900 ..  823936 -  -9.5  -4.58663   ATGACGGCTGAAAAA    GTTCAGGCTGCAG CGAAGAAATAT CTGCAGCCTGACC    AGATTGTCACTTTAG  91 197
    AM1_0839  821905 ..  821920 -  -3.2  -3.76125   TGATGTCAATGTAAA              TGCCGT AGCG ATGGCA               TCGTTGGGGCTGAAT  53 130
    AM1_0838  821146 ..  821157 -    -3  -2.81118   AGAATCCACTCAAAC                CAAA GTTT TTTG                 TACGGATTTGCACAG  42 359
    AM1_0830 NONE
    AM1_0829 NONE
    AM1_0828  807270 ..  807284 -  -3.6  -4.21343   TTGAAGAGACACAAA               CCAATA TCT TATTGA               CCCTGGACAATGATG  60 213
    AM1_0823 NONE
        grxC NONE
    AM1_0820  800387 ..  800397 -  -2.4  -3.09878   TCCATCGACCGAACA                 CGGC ATT GCTG                 ATGCCCCCTCAGAGA  43 62
    AM1_0819  799322 ..  799332 -  -3.2  -3.85698   TTTCGCTGTGATAAA                 TGGC ATT ACCA                 GCCCTCCTGTAAAAC  53 20
    AM1_0818  797646 ..  797656 -  -3.2  -3.16564   CTGCGATTTCACTAA                 CACC GCT GATG                 AATTTTTTTCTTTTT  46 191
    AM1_0817 NONE
    AM1_0816  795039 ..  795051 -  -6.3  -3.68351   CTTCTAGGATTCAAA                CTCTT GAA AAGAG                CTTAGCGAAAGGAAC  63 27
    AM1_0815  793503 ..  793516 -  -4.5  -2.94747   CGATTTGATCATAGA               TAGCC CCCC GGCCA                TTATGAGCCCTAAGC  50 223
    AM1_0811  786539 ..  786555 -  -2.9  -3.24924   CTGCTAGGCACAACA              CGAGTGA CGA TTACCCG              ATTGTTAGGACTGTT  45 229
    AM1_0808  784455 ..  784473 -    -6  -3.01712   GGGGCTGTTTGAAGA             GGTATTGG TGA CTAATACC             ACCCCGATCCCCCCA  53 172
    AM1_0804  781540 ..  781566 -  -7.9  -2.78384   TGTTTGGTTATTAGA         TCAGCGGGGCG TCGTT CTACCCGCTGA         TAGTTATCCCAAACT  59 411
    AM1_0802  779731 ..  779750 -  -5.7  -4.20696   TGAGCAATTGCAAAA            TTACCCC CATCCT GGGGCAA             CCTGCCCCCCATTGG  69 71
    AM1_0800  777050 ..  777061 -  -7.2  -3.14468   TCCGATGAGATCGAA                GCGG CTAC CCGC                 CGTATTGAGCGAAAA  60 428
    AM1_0797 NONE
    AM1_0796 NONE
    AM1_0795 NONE
    AM1_0794 NONE
    AM1_0793 NONE
    AM1_0792 NONE
    AM1_0791  771130 ..  771144 -  -2.8  -2.80005   GAAAAACGAAAAACG               TTGAAG CTA CTTCTA               TTGGCACTCTAAATG  42 49
    AM1_0790  770259 ..  770272 -  -3.8  -4.11216   TTGTGATGGCCAAAA               CCCT AGACCA AGGG                CTGGCAGGCATCTTT  60 203
    AM1_0777  754571 ..  754583 -  -2.7   -4.3739   TAGCCCCCCACAAAA                CATCT AAA AGATA                TACAGAACTACCACA  59 166
    AM1_0776  753854 ..  753865 -  -2.2  -2.72549   ATCAACACAAGTAAT                GACC AAAT GATC                 CAGGGCTTGGCTAAA  40 160
    AM1_0775  753362 ..  753373 -  -5.8  -2.90075   TGTCTTGGAAGGATA                TGGG TATC CCCA                 ATCTGGACCGGTGAG  53 47
        modA NONE
    AM1_0772  750190 ..  750219 -  -7.9  -5.75342   CGTTTTCAAAAAAAA       CA-CCGACAAGCTG AAC CAACCTGTCGGACG       TATGTGTGTTCCCCA 100 170
        purT NONE
    AM1_0768  744618 ..  744635 -  -6.3   -3.6543   TAATGTCCCAAAATA             CCCCTAA GCAG TTAGGAG              AAACCATAGATCGAT  63 491
    AM1_0765 NONE
    AM1_0764 NONE
    AM1_0763 NONE
    AM1_0762 NONE
    AM1_0761  740414 ..  740427 -  -4.5  -2.81464   CTATGACTTAGTACA               GAAGG CTAT CCTCC                CCCTAAAGATGCTGT  49 98
    AM1_0758  738194 ..  738206 -  -4.8   -3.1811   GGTTGTAGAATAAAG                CCTG GTTGA CAGG                ATTAGAGAAATATAT  51 316
    AM1_0756  735834 ..  735859 -  -2.6  -4.86731   TGGGTGGAAATAAAA         GCATGGGAGTT TATGC AACTCGCA-GC         CCCAATCGTCCGAAT  71 512
    AM1_0752  732186 ..  732220 -  -4.4  -4.37506   ACCAGCAAAGACAAA     CAGCAGAGAATC CTTGAAATTGT GATTCCCTACTG     TTCTCCAGGATTACT  65 494
    AM1_0741 NONE
    AM1_0740  719094 ..  719115 -  -2.3  -2.63347   CTTAAGCAGAAGGGA           GCGC-CTATT ATG AATAGTGAGC           AAGTACTCTCATTAC  40 374
    AM1_0735 NONE
    AM1_0734 NONE
    AM1_0733  716486 ..  716506 -  -5.5  -2.72839   AAGGATTGTCAAGTA            GCCAAAT CATATCT ATTTGGC            CCTAACAACAGGTTT  49 429
    AM1_0731  715976 ..  716006 -  -7.7  -3.09878   TGTATTTACGGAAGA       TCCCTATTGGC TTAAAGATG GCCAATAGGAA       GGAGCTTTTCTATAT  63 74
    AM1_0719  701939 ..  701955 - -12.3  -2.84126   TCATAAATCTCAAAG              TCCCCCA GAA TGGGGGA              TTTAGGGGGCCAATG  89 131
    AM1_0718 NONE
    AM1_0717  701482 ..  701498 - -12.3  -3.53224   CATTCGCCCCCTAAA              TCCCCCA TTC TGGGGGA              CTTTGACTATCGATC 100 32
    AM1_0713  693632 ..  693664 -  -3.3  -4.56597   TGGTCTGGGCAAAAA      GGGCGGGTGCGAT CGCAATC ATTGAAACCGCCC      CAAAATAGTGTCGAT  63 42
    AM1_0708  690245 ..  690255 -  -2.4  -4.94243   TCAAAAAAAGCAAAA                 GCAC TGT GAGC                 CGAAGGAGTTGAGGG  70 501
        cyaA  683538 ..  683558 -  -7.6  -2.53876   CTGTATCTTAAGCTA            TCAAACCC TGGGG GGGTCTGA            CGAGGAAAATCCTGT  60 77
    AM1_0701  682442 ..  682454 -  -2.6  -2.87132   CCTTTGCTTTAGATA                CGGG AGCGA CCCA                AACCATTCTGTCTCC  42 363
        phrB  678272 ..  678283 -  -2.2  -2.56449   ACGTTAGCAGAAGAC                GGTC CTCC AACC                 CTAGTGTCAATCGAG  39 78
        pdhB NONE
        secD NONE
        secF  674422 ..  674436 -  -4.2  -3.53012   CCTTTTTGCCGCAAA               CCCAAT TCC ATAGGG               GATGGGTACTCCCTT  52 418
    AM1_0692  671939 ..  671967 -  -4.5  -3.65812   TCCTCCTGAATACAA        GCCCTTGGCCC TCGCCTT AGGCTAAGGAC        AGCCCTAGAGGAGGA  57 252
    AM1_0690  671077 ..  671095 -    -6  -2.82933   CTCGAACCGACGACA             TTCAGCTT GGG AAGCTGAC             GTTCTACCACTGAAC  53 220
    AM1_0683 NONE
    AM1_0682 NONE
    AM1_0680  667878 ..  667895 -  -4.9  -3.14463   AAGGGGTTTGAGCAA             CTCACATC AAA GATG-GAG             GCATTTTGCTGTCCA  50 82
    AM1_0679 NONE
    AM1_0678 NONE
    AM1_0677  663998 ..  664023 -  -2.5  -3.23869   GAGTACCTTACAAGA         GCTTCACGG TGTATATT CCTCGAAGC          CTTCTATGGGGTCAC  46 3
        hsdR  658128 ..  658142 -  -4.2  -2.52623   GTTTGGCGATAAGAC               CCCATA CAT TTTGGG               CAGACATCCTTGTCA  44 85
    AM1_0671 NONE
    AM1_0669  656086 ..  656099 -  -2.3  -4.18762   AATCTCGATCCAAAA               GTCAG TGAC CTGGC                AGCCTCCGATGTAGA  57 130
    AM1_0664 NONE
    AM1_0662  648404 ..  648416 -  -3.3  -3.18274   GTGATGGCAAGTCAA                GTGTG TAT CACGC                TGAATTTATAGGGAT  46 123
    AM1_0661 NONE
    AM1_0660 NONE
    AM1_0659  643770 ..  643786 -  -4.4  -3.38991   ATCTCTGCAACAAGA              GCTGCA GCAGT TACAGC              AACAATTCAAAAAAA  51 480
    AM1_0657  643030 ..  643072 -  -2.7  -4.26681   ACAAATGATTCAAAA TGATAAGACT-GCCTCGACA TCAG TGTCGAGGTTAGACTGATCG TCATTCTGGAACAAC  59 61
        ccmK  642383 ..  642403 -  -4.8  -2.53911   CTAACCCTTAATTCA           CGTTC-GAA AGGG TTCAGAACG            TTCTGAGTAATCAAT  47 2
        ccmK  641964 ..  641977 -  -5.3  -4.76041   TACACCTACTAAAAA               TTCCT AGCT AGGAA                AGCTGAATCTCCCCC  75 45
    AM1_0644  629794 ..  629810 -  -5.1  -3.36515   TCGCATCTGCAAACA              CATGAAC GAT GATCATG              CCGATGCTGTTTTAC  54 271
        hisS NONE
    AM1_0641 NONE
    AM1_0640 NONE
    AM1_0639 NONE
    AM1_0638  625192 ..  625237 - -13.3  -4.51196   TCTAAAGCTATAAAA CATAGCGAGAAAGGGGGGCTC AAAC GAGCCCCCCTTTCTTGTCAAA AACTAGGTCAATGAA 100 55
    AM1_0636  623254 ..  623276 -  -4.1  -3.65883   GAGCATTTAAAAAAC           CTTTTGGCC TCCCT GGCCAATAA           TTATCGATGTGATGT  55 125
    AM1_0632 NONE
    AM1_0631 NONE
    AM1_0630 NONE
    AM1_0629  616341 ..  616356 -    -4  -4.36127   GCCAAGAACTGAAAA              TC-CTCC GAG GGAGTGA              GTCAGACATTCGTAA  65 171
        birA  613390 ..  613402 -  -6.3  -3.73611   AGCAAAGAGAGACAA                GGTTA ATT TAACC                TTCAAGACTTAGCAA  63 149
    AM1_0624  611626 ..  611636 -  -5.4  -3.49618   GTTTTACACAAGCAA                 CTGA TTA TCAG                 CTTAAAATTTCATCA  56 431
    AM1_0622  609572 ..  609605 -  -3.1  -2.81133   GATGCATTCATGACA     TCCC-CGAATCTGGGG TCC CCCCATATCCTTAGGA     TGCCCAACGGATTAG  43 96
    AM1_0621  608728 ..  608759 -  -4.3  -5.49809   CAAATGCTAAAAAAA      GAGCAGGGTTGGC AATTTA GCACATCCTGCTC       TTTAATAAATCCATC  85 88
        infC  606706 ..  606732 -    -5  -3.02973   TTAAAAACCTAGAGA         GCCATCAGGCCA AAA CGGGCTATTGGC         GGGAGAGTGCCGGGG  49 209
    AM1_0616  604772 ..  604788 -  -6.5  -3.17901   ATATGTGGAATTCAA              CTTGGTC TAT GACCGAG              GGACTATTTTTGGCT  57 255
    AM1_0611 NONE
       ribAB  598287 ..  598300 -  -2.3  -2.74999   GAAGGTTTAAGATTA               TCCTG AACT CAGGT                TATATAGGTATGTTC  41 55
    AM1_0607  597220 ..  597232 -  -6.2   -3.1319   TCAAAACCTATTCAA                CCCG TTCGG CGGG                GAATTACCTTTACGC  55 108
    AM1_0600  587861 ..  587871 -  -6.8  -3.14344   TATTTCTGTGAGTAA                 CCTG ACT CAGG                 TGTGGCAAGGATTAT  57 391
    AM1_0597  583718 ..  583746 -  -4.5  -3.16055   CAAAGGTGCGAGCAA        CATCGCTAACACG GTT CATGATGGCGATA        GGGATTTACACTGAC  51 200
    AM1_0596  583299 ..  583315 -  -3.1  -4.14392   GCTCAACTTGGAAAA              TTTTTAA GAA TCAAAAA              CGATCTAACTTTTGC  58 30
        acr3 NONE
        arsC  581661 ..  581671 -  -5.4  -2.62263   ACGGGTTCTAGACCA                 TGAC TAG GTCA                 GGATACTAATCTCAC  49 41
    AM1_0593  579664 ..  579674 -  -3.2  -3.48105   TGAACTCAGGAAAGA                 GGCT GTA AACC                 ATAGAGCAGAATAAT  49 5
    AM1_0590 NONE
    AM1_0589 NONE
        purC NONE
    AM1_0587  573669 ..  573688 -  -6.4  -3.28791   AGGGTGTGTTGATAA            GGAGATGC GATC GCATCTTC             AAAACCCTTTAACCC  59 89
        lpxC  572852 ..  572875 -  -2.3  -2.91664   ATTCAACAAAAAATG          CAGTCAGCC GAGTAA GGCTTGCTG           AAGGCGTTTGGCAAA  42 5
        fabZ  571873 ..  571883 -  -8.2  -2.75069   TCCATGAAAGAACAT                 GGGC GAT GCCC                 CTTGAATATCGAAGA  62 494
        lpxA NONE
        lpxB  568489 ..  568499 -  -6.8   -4.4078   GCGTCTGAACGAAAA                 TGGG CGA CCCA                 TCAGGGCGCGTCGGA  74 250
    AM1_0580  564861 ..  564871 -  -3.2  -2.63252   ACTTTTTAATAAGAG                 CGCT AAA AACG                 TCATCAGATTCGAAT  42 29
    AM1_0577 NONE
    AM1_0576 NONE
    AM1_0575 NONE
    AM1_0574  560339 ..  560351 -  -3.4  -3.22475   CCCATTTTTAGAATA                CTTC TGATT GAAG                TGCTCAGGTGTCAGC  46 113
    AM1_0572 NONE
    AM1_0571  558533 ..  558562 - -10.1  -4.72272   GCCTTTCATCAAAAA       CCGGTTCTCTC TTGGAACT GAGAAAACCGG        TTGAATGGGATGTAA 100 47
    AM1_0569  557071 ..  557097 -  -5.1  -3.53091   AGGCGGGGGTGGAAA         CTTTGGTGGCG GACGA CGCTACTAAAG         CCCATTTGGTTTGAG  57 271
    AM1_0567  555993 ..  556003 -  -3.2  -3.13104   AACTATCCAAGAAAC                 CCAA GAT CTGG                 AAGAACTTAAACAGG  46 478
    AM1_0565  553274 ..  553288 -  -2.9  -4.38092   GAAGAATGAAAATAA               TTGAA GCAGG TTCAA               GGCATCCTAGTAAAT  59 353
    AM1_0564  551903 ..  551923 -  -6.1  -3.87627   GGTTCAGAGAAAACA            CTCCCACCC TGA AGGTGGAAA            ATAAGTCTTTACCTA  65 90
    AM1_0562  550147 ..  550168 -  -2.9   -4.2461   ACCTTGATGAACAAA           GGGCTGGAA GTGA TTGAAGCCC            ATTACCTATTTGGCG  59 524
    AM1_0558  543911 ..  543929 -  -8.2  -3.14931   GTGATTGTCGATCAA             CGATCTTC AGT GAAGATCA             TGGAATTGAGTGGTT  67 123
    AM1_0557  543142 ..  543180 -  -5.3  -4.85599   GCTACCGCAGAAAAA  CGTATAGCGGGGACAA-AG GCG CTCTTGCCCCCGCTGG-CG  CTCTAGCAACGGGTT  75 45
    AM1_0555 NONE
    AM1_0553  539845 ..  539863 - -10.3  -4.07568   GTTTGGGGCCGAAAA             GTGGGGT TTCTG ACCCCAC             CCAAATGGGCTGCTT  85 436
    AM1_0551 NONE
    AM1_0550  535117 ..  535128 -  -4.4   -4.0098   CCTCAAGGCAAAGAA                TGGT GCTC ACCA                 GGTCACTTTATTCCG  59 20
        hemL  533484 ..  533503 - -13.6  -5.29782   GACATTCATAAAAAA            GAGAGGCC TATA GGCCTCTC             TTGAATGATTTTTTA 100 83
    AM1_0548 NONE
    AM1_0547  529069 ..  529089 -  -2.6  -4.28361   GCAAGGGTAGCAAAA           CCTC-AGAG CTAT CTCTAGAAG            GTCAATTACTGGCCT  59 169
    AM1_0545  526742 ..  526759 -  -9.9  -2.53759   AATATTGTGAATCTA             CCCTTGA ACCT TCAAGGG              TTTGTAAATATCGAC  70 122
    AM1_0544  524652 ..  524667 -  -2.6  -4.30231   AAGAATGAACATAAA              TAAAAG AGGG CTTTCA               GCTTCAGGGGGGACA  59 103
    AM1_0543 NONE
    AM1_0542 NONE
    AM1_0541  522703 ..  522722 -  -2.2  -3.65068   ATAAAAACAGTAGAA            TC-CAGTTT AAT AAACCGTGA            CTGGAGTAAAGCAAA  49 12
    AM1_0540 NONE
    AM1_0539  520188 ..  520203 -  -6.2  -5.53288   TTTAACCCAAAAAAA              TCACTA AGCT TAGTGA               AGAACCAGCTCAGTG  91 128
    AM1_0538  517961 ..  517979 -  -8.8  -2.87881   CAATCGCTTGAGATA             GTCCCAAC CCC GTTGGGGC             CAAACCTTATCGACT  67 418
    AM1_0534  515467 ..  515477 -  -4.6   -2.7083   GATCTTAGAAACGTA                 GCGG CAA CCAC                 CGAACTATGCCAACC  48 4
        chlD  513199 ..  513210 -  -2.2  -3.04792   CCATTACTCCGAATA                CAGT ACTG ACCG                 CAGGTCCACTAGCCA  42 113
    AM1_0530  505916 ..  505930 -  -4.3  -4.57837   ATAGGGTGTCAAAAA               CGAAT GCGAT ATTCG               AGAATGCCAACAGCT  66 4
        pgsA  505134 ..  505144 -  -5.4  -3.02202   CAGCTTTACAGAAAC                 CGAA TAG TTCG                 CTCGTTCCGTAATCT  52 259
    AM1_0528  504257 ..  504295 - -18.4  -3.63627   TTCTGATATGTCAAA   GCAGAATTGGGTGAAG TCAGTTG CCTCACCCAATTCTGC   TTTGACATATCATCG 100 69
        psbO  502760 ..  502788 -   -14   -5.4251   TTGAGACATAAAAAA        GCAGGTGCGTTT GATTA AAACACACCTGC        TTTTTGAATGTATAT 100 86
        fliA  501172 ..  501182 -  -8.2  -3.09505   AGACCCCACTGAATA                 GGGG CCG CCCC                 CCGATATTTAGGGAG  67 468
    AM1_0522  494855 ..  494876 -  -5.1  -2.78384   TGCTGCTTCATCATA           TGCGCCTCT GGGC AAAGGAGCA            GGGAAATGAATTTCT  49 293
    AM1_0517  491170 ..  491188 -  -4.6  -3.01915   GGTCTATAAAAATAT             TAGTTCTT CTC AAGATCTA             TTCAGGTTCTATCAA  50 23
    AM1_0516 NONE
    AM1_0515  488291 ..  488329 -  -5.3  -4.18018   TCCTGTGATCGAAAA  GCTGGTGGATTACCA-AG AGTT CTGTGGTATTCCTCAAGC   CCAAGCAGCCGAAGC  66 452
    AM1_0512  485937 ..  485948 -  -4.4  -3.16971   TTACTATACACTCAA                CAAC CGGG GTTG                 TATCTGACTAAAAAA  49 2
        sodN  485335 ..  485358 - -11.8  -3.78778   GCACCATAGCAAGAA          CTCCCAAACT GAGC AGTCTGGGAG           TGGTGAACTTACGGG 100 51
    AM1_0510 NONE
    AM1_0507  481766 ..  481790 -  -8.6  -4.64076   AAGCAAACGAGAAAA          GCAGTCAATG AAGTA CACCGACTGC          TTTAAGGTCAATGAA  91 280
    AM1_0504 NONE
    AM1_0503  479440 ..  479457 -  -4.1  -3.34113   AAGTCATAAAGGCAA             CTTTGCT TTTT AGCCAAG              CTGGATTTAGTACTG  51 32
    AM1_0502  478061 ..  478086 - -16.3  -2.79291   AAACTTCATCAAGCA         TTGTCCTCAGC TAAA GCTGAGGACAA          CAGGATTTATCCCAA 100 125
    AM1_0501 NONE
    AM1_0500  476989 ..  476999 -  -3.2  -3.16742   TTTAATCCGCATTAA                 TCGC CAG GCAA                 GACACTACCCAGCAC  46 115
    AM1_0499 NONE
    AM1_0498  474230 ..  474240 -  -4.6  -3.29511   GCGATGTCGCGACAA                 CCAC AAG GCGG                 ATCAACCCCCAAATT  53 157
    AM1_0497 NONE
    AM1_0495 NONE
    AM1_0493  471237 ..  471251 -  -5.6  -3.75169   CATCACGTGAGTAAA               GCCCTG ACG CAGCGC               TTAGAGCGGACCAAT  59 234
    AM1_0491  469949 ..  469970 -  -5.9  -3.44553   TCAAAAACCCCAGAA           CATTCAAGC GTTT ACTTGAACG            AGTCGGTATTTCCAG  59 154
    AM1_0488  467436 ..  467446 -  -5.4  -3.55262   AAGCTCAATCAAACA                 GCTA GCT TAGC                 TTTGAGAGCAGAGCG  57 8
    AM1_0485  465563 ..  465577 -  -8.6   -2.5547   ATGTCTTATACCAAT               TCACCT ATT AGGTGA               CTTGTATAGGTAAAG  63 18
    AM1_0480  459971 ..  459982 -  -3.6  -4.11216   TGCCCACCTCTAAAA                CGGC AGCC GCCA                 TTCGCAGAGAAGCCC  58 417
    AM1_0477  457951 ..  457961 -  -6.8  -3.83026   GGTTGGTAGATGAAA                 TGGC CGA GCCA                 TCCATGACGCCGTCA  67 377
        feoA NONE
        feoB NONE
    AM1_0472  453197 ..  453217 -  -9.7  -2.71731   GCTATTCTCGAAGCA            GGGGCGA CTCGTTT TCGCCCC            ATCCTTCTCACGAGT  66 371
    AM1_0470 NONE
        acsF  442399 ..  442410 -  -5.8  -3.28712   GGTGCTTGGTTACAA                GAGG CCAA CCTC                 CGCCGAGCGGATTTA  57 129
    AM1_0451 NONE
    AM1_0450 NONE
    AM1_0449 NONE
        psbA  428601 ..  428637 -    -6  -3.32844   TTCTGGAGCCTAGAA   GGAGATCG-TTCAGC GGATTGAG GCTGAAGCAACCTCC    TTTTCAACGTGCTCT  57 40
    AM1_0447 NONE
    AM1_0446  427699 ..  427718 -  -6.4  -3.22448   ATTAAGACCCAGGAA            GATTGGGC CATT GCTCAATC             TTGTTATGAACAGTG  57 72
    AM1_0437  409723 ..  409746 -  -3.1   -2.8785   CAATCAATGACCATA          CCTTTC-GGC GTCGA GCCTGGAAGG          GCGTGCTGAATAAGA  43 437
    AM1_0434  407812 ..  407837 -  -3.3    -3.727   CTTACCATATCTAAA         CTTCGCTGG AATGAGGG CCAGCAAAA          CTGGCAGGACGGCAA  51 252
    AM1_0432 NONE
    AM1_0431  406164 ..  406188 -  -7.1  -3.83026   TTGCCCCAGAGCAAA          CCCAAACAACC CTA GACTGGTTGGG          TAAACATCAAATTTT  69 162
        rlpA  403416 ..  403465 - -29.1  -3.14931   CTGATTTTCTAGCAA TTCAGCTTAAAAAAGCAGCCCCA GATT TGGAGCTGCTTTTTTAAGCTGAA AGCTAACGCTTAACT 100 39
    AM1_0426  400868 ..  400879 -  -2.2  -3.52874   GGTGACAGAAGAACA                TGCC AAGC GACA                 AATGACAGCCACAAC  47 205
    AM1_0420 NONE
        pilB NONE
        pilT NONE
        pilC  390371 ..  390422 -   -25  -3.09175   AAGAAATTCCTAATA CATATTGTAAGCAAGCTCTATC TCTTAGTC GATAGAGCTTGCTTACAATATG TATTAGGAGCTAGCG 100 93
    AM1_0416  389757 ..  389769 -  -4.1  -3.33315   TGAAGATGCCCATAA                CTCAT CAA ACGAG                GCTCAATACTAAATC  51 118
    AM1_0415  389116 ..  389127 -  -2.2  -3.41454   ATAAATTACTGATAA                GCCT AAGT AAGC                 CCAGTTCAGATTAAG  47 141
    AM1_0408  383059 ..  383083 -  -2.1   -3.6682   TGTCAGCTATCCAAA          TGGCAAATTTC TTT GAAGGTTACCA          TCTCAATTTCCCTAG  49 149
    AM1_0407 NONE
        cysC  380103 ..  380114 -    -3  -3.14132   TTTGTTTTTTAGTAA                TTGA CTCG TCAA                 TTTACCTTAGCTAAG  46 36
        rfbB  379002 ..  379012 -  -6.8  -2.55712   GGAGATGTATAACAT                 GAGC AAA GCTC                 TCTTACTGCTGAGTA  55 28
        rfbA NONE
        rfbC  377423 ..  377436 -  -2.4  -2.72977   AGTTCACAGACACCA               TCGT CAGTTC ACGA                TTTCTGTCCCTTCAC  40 73
        clpB  374608 ..  374628 -  -2.5  -3.19371   ACTGAGCGAAGCCAA            TCCCAATCC AAC GACTTAGGA            CGCTGCTGGAGCTAG  44 20
    AM1_0401  373278 ..  373292 -  -8.5  -3.53811   GCTATCCCTCCGAAA               CCCGC GTTAA GCGGG               GACACCGGGTGGTCA  71 203
    AM1_0397 NONE
    AM1_0396  370116 ..  370126 -    -4  -3.90922   AGCCCTCCCAAACAA                 CTAT TCA ATAG                 ACACTCTAAGGATTT  59 31
    AM1_0395  367377 ..  367391 -  -5.8  -2.91383   AGGTCGAGCTATAGA               TTCTAA GGG TTAGAA               ACGCGCTGGTAATTT  54 444
    AM1_0391 NONE
    AM1_0390  361693 ..  361717 -  -9.4  -3.83502   TAGCTTGATATTAAA          GAGGAAAGAA CTAAT TTCTTCCCTC          TTTAATGGTAAATTC  81 44
    AM1_0389  360725 ..  360736 -    -3  -3.37823   TATAAATCACAAAAC                GATA GCAA TATC                 AATTTCAATATACAA  47 59
    AM1_0388  359046 ..  359065 -  -6.5  -6.02345   TAATCACAAAAAAAA            GAGAATC AGAAAA GATTCTC             TGACATGATCATTTA 100 507
    AM1_0387  357581 ..  357597 -  -2.3  -3.10389   ACAAACGACAGAAAT              TTAGTTC TCA AAACCAA              GTATTATCACTAAAA  43 127
    AM1_0386  355655 ..  355667 -    -2  -3.41988   GTTGATCTAATAATA                TTGA CTGAC TCAA                AATATTCTTAACATT  47 103
    AM1_0385  354779 ..  354799 -  -4.1  -2.98942   ATTTGCTTAGATATA            TTTCAAGAA ACT CTCTTAAAA            AAGCCTGACGAAATT  47 7
    AM1_0384  353555 ..  353569 -  -5.8  -2.78725   AGATCTGATTAATGA               CATTTT TTA AAAATG               GGTACTAGAATGTTT  53 30
    AM1_0383 NONE
    AM1_0382 NONE
    AM1_0381 NONE
    AM1_0380 NONE
    AM1_0379 NONE
    AM1_0378  346827 ..  346841 -  -2.8   -3.4285   TTAGTGAACCTATAA               TCAACC CAA GTTTGA               TGTGATGAGTGGTAA  48 11
    AM1_0377  345496 ..  345538 -  -4.5  -3.76411   CCAAAATTATTGAAA TTTAGTCTTTAATTTTA-GT TTTT ACATAAACATAAAGACTAAA ATAGGTTACAAAAAA  59 66
    AM1_0376  344240 ..  344266 -  -6.6  -3.39061   TCTTAATAAAAAGGA         TCTCCAACTATG TGA CATACGTGGAGA         AAACCTAAATAACAA  61 239
    AM1_0375 NONE
    AM1_0373  342908 ..  342919 -    -3  -5.01732   AAGTTCCTTAAAAAA                TCTT CAGA AAGA                 AATTATTCTACTAAA  74 48
    AM1_0372  340831 ..  340847 -  -5.1  -2.96656   GATATAGCTAAACCA              GCAAATC TGT GCTTTGC              ATAAGTATAAAGAAT  52 234
    AM1_0371  339664 ..  339677 -  -3.9  -3.33696   TTTTGGTTTAAGTAA               TTACT TTCA AGTAA                GTTGAACTAGGGAAA  49 4
    AM1_0368 NONE
    AM1_0367  336619 ..  336630 -    -3   -3.9318   AAATTCTCAAAAACA                TTCA ATAT TGAA                 TCAATGAGATCAATG  56 56
    AM1_0366 NONE
    AM1_0365  334052 ..  334087 -  -3.2  -3.38812   TTTTTGGTAATAATA    CAGCCT-GGTACCTACC CTT GATGGGTACCCACGCGG    GTAAGGCCTTTCCTT  48 392
    AM1_0363 NONE
        dinF  329964 ..  329982 -  -3.2  -3.87815   CCCCATCTCTATAAA             CTTCAA AGTCAGG TTGAAG             CGACTATGGGTGGTG  53 513
    AM1_0361  328826 ..  328840 -  -4.2   -3.5947   AAGTTGCACACATAA               TCGCGA TTG TAGCGA               AATCAGAATGCACGA  54 287
    AM1_0360  327632 ..  327665 -  -6.7  -2.93549   CAGGGCCAAGAATTA     TTGCTGAAAGCTG-GC TTT GCTCAGCTCTCTGCCA     ACCCGCAGCAATAGG  58 49
    AM1_0357 NONE
    AM1_0356  323893 ..  323905 -  -2.6  -4.08216   GTAGGCCCGCTAAAA                GCGG AAATA CCAC                TGACTATGCTGGACT  57 7
    AM1_0355  323240 ..  323251 -  -4.4  -4.08557   TTCGTCAAAGAACAA                GATG CGCT CATC                 CGATTGTCGTGATTG  61 21
    AM1_0353  322549 ..  322573 - -10.7  -3.73224   GCAGCGTTCATCAAA          CGTCTGAGTAC CGT GGACCCAGACG          ATATCGTCTATGCGG  81 446
    AM1_0352  321683 ..  321702 - -12.2  -3.78775   TTCTCTATCAGCAAA            TGCCTGCA ATGC TGCAGGCA             TTTGCTCCCTTCCCG 100 49
        cysH NONE
    AM1_0349  320416 ..  320430 -    -5   -2.6836   AAACATCTAAAGTGA               GAATTC CCT GAATCC               AGCCTCAACGCAACG  48 86
    AM1_0348  319693 ..  319705 -  -5.5  -3.74077   CTGTACATAGTGAAA                GGGAA AAG CTCCC                TACACTCGTCTATAG  61 112
    AM1_0347  318759 ..  318790 - -13.1  -5.11836   ACACTCAAAAGAAAA      GCGATGGCCTTCG TTTTAT CAAAAGCCATCGC       CATCAGTCAACGCCA 100 63
    AM1_0340  312422 ..  312441 -  -2.2  -4.49756   GGTTAAAGAGGAAAA            TTCTCTTAC CCA GCAAG-GAA            TCTTCTCAACAGGCA  60 266
    AM1_0338 NONE
    AM1_0337  310217 ..  310227 -  -5.4  -4.31329   GTAAAAACCTTAAAA                 CTCT TTG AGAG                 AAGGAATAATGGCGT  68 9
        glnN  307849 ..  307880 - -14.7  -3.61398   GTGCGCTCTGAACAA      GAAACTCACTTGA GATTCT TCAAGTGAGTTTC       TTATGGTTATTCGCC 100 48
        ppk2  306321 ..  306341 -  -9.7  -4.07885   CAGGGCTTTTGAAAA            TCGGCCCTT TCA AATGGCCGA            CTGGATTTCAGGACA  81 486
    AM1_0331  302904 ..  302928 -  -2.2  -4.32034   TCAGCACCAGCAAAA         GGTTGACCAAA TTAT TTTGGTTA-CC          GATGAAGGGGGAAAT  61 413
    AM1_0324  298667 ..  298688 -  -7.3  -3.02147   GGTAATATAATCACA           GCTTGCAGC ATAT ACTACAAGC            ATGCTACAACTAATT  61 321
    AM1_0310  292600 ..  292626 -  -7.3  -2.52896   TGAGCCCCTAACTGA        TCG-TGGAGGGG CCTT CCTCTCCATCGA         TCAGTTAGGGACTAA  58 37
    AM1_0287  286599 ..  286609 -  -3.2  -3.82084   CCTCAACAGTAACAA                 CCGT TAG ACAG                 GGCATTAATCTTCAC  53 86
    AM1_0286 NONE
    AM1_0285 NONE
        priA  282126 ..  282182 -  -9.5  -2.84192   CACATCAGTATTAGA GGCTTATCTCAACCGAAAAGCGCATC TTCAAG GGTGCGCTTTTCGGTTGAGGCT-GCA TTCTTATAGGAGTTT  70 29
    AM1_0281  280167 ..  280179 -  -3.4  -4.15748   CTACCTTAAAAAAGA                CACT CCTCT AGTG                CAGTGGTCTGGTTAA  58 163
    AM1_0278  276162 ..  276198 - -12.4  -4.71234   AAACCCAAGACAAAA    CCCTAGCGTTTTGC GGTGACAAA GCAAATCGCTAGGG    TTTAAGAGAGAGGAT 100 42
    AM1_0269 NONE
    AM1_0268 NONE
    AM1_0267 NONE
    AM1_0266 NONE
    AM1_0265 NONE
    AM1_0264 NONE
    AM1_0263  262506 ..  262516 -  -6.8  -3.36991   TATGAGGTTTAAACA                 GGCA AAA TGCC                 TCAGTTTTATCTCAC  61 112
    AM1_0262  260106 ..  260120 -  -6.4  -3.53091   ATCTCTTTTGGCAAA               CAAGAC TCG GTCCTG               GAAGTAGTGAAAAAG  61 255
    AM1_0261 NONE
    AM1_0260 NONE
    AM1_0259  257400 ..  257413 -  -2.3  -4.14243   TATCTCACTTCAAAA               GGGTC TCAG GACCT                CGCCATTGGGCTAAT  55 92
    AM1_0258 NONE
    AM1_0257 NONE
    AM1_0252  248806 ..  248827 -  -2.3  -3.56643   TTCAGATTGCGCAAA           CCTTAGG TCTGACAC CCTAAGA            TCAATTGACTATTGA  47 132
    AM1_0251  247507 ..  247519 -  -4.1  -4.53163   TTAGAGACCAGAAAA                CGATC ATT GATCA                TGAAGCAGATGTGCT  68 158
    AM1_0249  244578 ..  244590 -    -2  -3.60151   TGGCTGAAATGACAA                TTGA TGGCG TCAA                GTTGGCCCGAACCGC  47 262
    AM1_0246 NONE
    AM1_0245 NONE
    AM1_0244  240855 ..  240865 -  -6.8  -3.20382   GTCTATACGCAGCAA                 GGCT TTC AGCC                 GTTTTTTTCGTAAAC  59 127
    AM1_0242  240087 ..  240098 -  -5.8  -5.01732   AACTTTTCCAAAAAA                CGGT TTTG ACCG                 GGGCCAAAATTCCCA  82 120
    AM1_0239  234056 ..  234070 -  -8.5   -3.3382   CGCACCAGAGACCAA               CCCCG CTTAT CGGGG               GAGGTATTTCTTTAT  69 75
    AM1_0238 NONE
    AM1_0237 NONE
    AM1_0236 NONE
    AM1_0235 NONE
    AM1_0233  229661 ..  229672 -  -3.6  -4.98522   AATCGGAGATAAAAA                CCCC AACA GAGG                 GTCTATACCTGGACT  73 486
    AM1_0231  228008 ..  228018 -  -6.8  -2.80016   CTGGAGCAGCAATTA                 CGGA GAA TCCG                 GTTGGACGCGCATAT  57 12
    AM1_0229  226686 ..  226697 -  -4.4  -3.29653   ACTGACGAAAGAAAT                TCAG CGAT CTGA                 CTCGGATTTTAGTCC  51 461
    AM1_0226  224429 ..  224450 -  -2.3  -3.25802   CATGAAAGGGACTAA           GGCTTTTAT AAGT ATATAAACC            AATAAAAGAATTAAA  45 252
    AM1_0225  223692 ..  223706 -  -2.2  -5.61881   GCCTAAAAATAAAAA               TCTATT GTC AATAAA               CTGGATTTGAAACGG  82 248
    AM1_0224 NONE
    AM1_0223  219335 ..  219346 -    -3  -2.57092   AATCTCAGTAAGGTA                TTCA TGGC TGAA                 TTGTTGGAGTATCAA  42 413
    AM1_0222  218724 ..  218751 -  -2.1  -4.80178   TATTAATCAAGAAAA       CAACCCATTCCTA TTAG TAGG--TGGGTCG        TTTAGGTTTGCATAA  66 155
    AM1_0221  217594 ..  217604 -    -4  -3.03474   GCGTACAACGATAGA                 CTTA ATC TAAG                 TGGGGCAACTGACGA  47 16
    AM1_0218  213473 ..  213502 -  -9.5  -3.99327   TATTTATGAAAAAGA       TTTCCATAAAAAC TTCA GGTTTTATGGAAA        CTATTCTCTCATAAA  83 444
    AM1_0215  210957 ..  210969 -  -3.3  -3.35224   ATATTTTCCTAAACA                GACTG GCA CCGTC                ACAGGCTTAGTGGGA  48 350
    AM1_0210  207465 ..  207476 -  -4.4  -3.68366   TGACGGCAAAACCAA                TGAG GACC CTCA                 TGACTCACCTGTTGA  54 163
    AM1_0208 NONE
    AM1_0206  204902 ..  204946 - -15.9  -3.61983   CCAACTCATAGATAA TTAAGTAACCACTGGTCACAT AAT AAGTGACCAGTGGTTACTTGT CAACCCCTGCTTGAG 100 407
    AM1_0205 NONE
    AM1_0204 NONE
    AM1_0203 NONE
    AM1_0202 NONE
    AM1_0201  201232 ..  201248 -  -2.9  -4.21989   TATAAGGGTAAGAAA              TCAGCCT GCC AGACTGG              CGGTAATCCCTCAAT  57 36
    AM1_0199  199681 ..  199691 -  -3.2  -3.55444   GCGGTAGTTTTTAAA                 CCTC TAA GAGA                 CCCCAGTGATTTGTC  50 266
    AM1_0194  193474 ..  193485 -  -5.8  -2.91264   TGTTGCAGTCAGATA                CCTG CATA CAGG                 GCAACGCTATCAACG  52 377
    AM1_0192  192421 ..  192444 -  -5.4  -3.71794   ACTCAATTAGGTAAA          TAATATACAC GATT GAGTATATTA           AAAATATTCAACAGT  59 372
    AM1_0191 NONE
    AM1_0190 NONE
    AM1_0189  190968 ..  190988 -  -3.4  -3.08314   TTTAAGGTTCAAAAC           TCC-TGTAA ATAT TTACATGGA            TGCATTTACAAGAGA  46 198
        folP  190002 ..  190016 -  -2.8  -3.45817   GTCTCAGAATAAAAG               CCAGAG ACG CTCTAA               GTCAATCTTAACAAA  48 56
         hli  189703 ..  189740 - -15.8  -4.68545   AGTCAATATACAAAA   CAATCCTGAGCA-TGCC GGTGA GGCACTGCTCAGGATCG   CAAGAATATGGATGG 100 70
    AM1_0186  189016 ..  189037 - -12.3  -4.00868   GCATTGACAATGAAA           CCCAGGGAA TGGC TCCCCTGGG            CAGACTCCTTGGTGT 100 127
    AM1_0185  188500 ..  188517 -  -2.7  -3.28684   AAGGATTGAGAGTAA             CCCTT TTTATCTT AAGGG              GGCAGGTTTCCAAAG  46 72
    AM1_0184  187426 ..  187442 -  -2.9  -2.80994   TGCAACCCTAGCAGA              CTGCATC AAA GATGCTA              TTCCCTACTCCCATC  42 132
    AM1_0181  185689 ..  185733 -  -2.4  -3.61715   CAGGCTGCTTAATAA CTTTTTCATGGAAATATC CTCTAAATT GATATTTCTATGAAAACA CTAAAAAATCAGCTT  49 290
    AM1_0180  184225 ..  184236 -  -4.4  -3.65351   GTATTTGGATCCAAA                GTTC CGAC GAAC                 CCTCAGCCGTCGAGT  55 125
        sphX  181191 ..  181205 -  -2.1  -2.72379   TCAATTCTCCAATTA               CTCAG GGATT CTGAA               TAGAACTACCTGCCC  40 70
        pstC NONE
        pstA  179222 ..  179245 -  -3.2  -2.50699   CCTTAAGGAACACAG          CTTATTACTC GGTT AAGAAATAAG           GTCATGTGTAAATTT  42 61
        pstB  178278 ..  178304 - -12.4  -2.95091   AGTTGAAGCCATACA         GAGGAAGCTAAA TCC CCTAGCTTCCTC         TGTTTCTTGCGAATG  93 47
    AM1_0172  171795 ..  171831 -  -5.2  -3.52073   CGTCGAATAGGATAA    CTGAAACCCTCTCAAC ACTGG GTTAAGAGAACTGCAG    GATCAGGTTAAGCAT  57 70
    AM1_0171  170985 ..  170996 -    -3  -2.93747   AGCAAATTTCATAGA                TTTG AATG CAAA                 GTACCAAGGGCAGCA  44 50
    AM1_0170  170571 ..  170581 -  -2.6  -3.02984   CGAAAACGCATAAAT                 TTAT TCA ATAA                 TTAAAGACACGCGCT  43 15
    AM1_0169  170007 ..  170019 -  -4.1  -5.31456   GTAATTTAGAAAAAA                TGACT TAA AGCCA                AAGCAAGAATACCTA  81 147
        sphX  168893 ..  168935 -  -8.5  -5.03145   CAACTTTTCAAAAAA GA-AGTTCCTGAGGAAGAAC TCGT GAACTTCCTCAGGAACAATC AGCAGAGTGTGAGAA 100 61
    AM1_0166  167374 ..  167389 -    -4  -3.93038   GATGGGAACATTAAA              TTCTGG GACA CCAAAA               CGTGGAAACTACTGC  57 482
    AM1_0164 NONE
    AM1_0163 NONE
    AM1_0162  160783 ..  160806 -  -4.5  -3.09834   GAGCCCAGTAGTGAA          TGGCTGCGA ATGAGA TCGCCACCA           GTGTCGTTAATTCAA  51 155
    AM1_0161  160015 ..  160027 -  -5.5  -3.48288   TAATGGAGAGCATAA                GGCGA AAC TCACC                ACCTTACTATCACTC  56 122
    AM1_0159  156926 ..  156939 -  -6.7  -2.57136   TGATTAATCATGAAG               GGTGA ATAT TCACC                TCTTCGCGTGAACCC  56 271
    AM1_0158 NONE
    AM1_0157  155364 ..  155402 - -14.9  -3.85698   TGGGGCTTGGATAAA  TC-AGATTCAAAGCTGGT AGTT ACCAGCTTTGAATCCAGA   GGCTGAGAGGGACAG 100 67
    AM1_0156  155127 ..  155141 -  -8.6    -3.737   GAAGCCGCGAGGAAA               TGAACC TAG GGTTCA               GTTGTTAATCGTAAG  73 44
    AM1_0155  154288 ..  154298 -  -3.2  -3.94184   AGATGGAACAGCAAA                 CATC TAG GACG                 TAAAGACAGGAGATT  56 145
    AM1_0150  149208 ..  149224 -  -6.7  -3.61715   GAGGGGGTTGAAGAA              TTAATCA ACC TGATTAA              ATCTGACGGCCGTTG  63 65
    AM1_0146  145365 ..  145383 -    -6  -3.03575   ATAAAAATTTATACA             GGAACTCA ACA TCAGTTCC             TTTTCTCTGTTGCTA  54 457
    AM1_0145  144738 ..  144766 -  -3.9  -2.74563   TCCACACTTCAATGA        TTGCAGCAAAG CGATCGT CTTTGCCTCAA        TTAAAGAGTGTAGAC  45 136
    AM1_0144  143014 ..  143025 -  -2.2  -4.08767   CGCATGGCTGGAAAA                GTCCC CGC GGG-C                TACGAGGATCGAGGG  55 439
    AM1_0137  135567 ..  135577 -  -5.4  -3.58269   CAATGCAGGGGGAAA                 GACA ATC TGTC                 TTGCGCCAATGATAG  59 76
    AM1_0136  134617 ..  134645 -  -2.3  -3.52321   GAGTTAACCAAAAAC        CTATGGTAAACCG AAG CGGTACACAAAAG        AAGTAAATTCTTGAG  47 417
    AM1_0135  134227 ..  134243 -  -2.9  -2.95652   GTTATCCAACCAAAT              GGCCGTA ATG TAAAGCC              CTTCATCTAAAAATT  43 32
        ino1  133004 ..  133039 -   -12  -4.08064   AATTTTCGTTCAAAA    TGAAAGCCTCGC-TGAT ATA ACCAAGCGGGGCTTTCA    TTTCTCAAAAATGTA 100 47
    AM1_0129  128478 ..  128501 -  -2.4  -3.18024   TGCCATTACTAAAAC          GGCATTCT CTATACTT AGGATGCC           CAAAGTTCCTAGCGA  43 87
    AM1_0128  128154 ..  128167 -  -6.7   -3.1634   TCTCAAATCACCTAA               GAAGC AGCA GCTTC                AGGGGAGCCTTCCCA  59 8
    AM1_0127  127528 ..  127538 -  -5.4  -3.41878   GTTTCTAAGGGACAA                 TACC CCT GGTA                 TCCAGCGAGCATGCC  57 307
    AM1_0124  126389 ..  126433 -    -5  -4.13767   TTTTTCATCTGAAAA CGAGGGAACACAAATCGATT GGCAT ACTCGATTTGAAATCCCTAG TCCAATGGGTCAAAG  62 155
    AM1_0121  124760 ..  124793 - -12.7  -3.03781   GCAAGTCAAAGTAGA     TTGTTGTCCTACTCAT CAA ATG-GCAGGACAACAA     GAGAAATAACTGTGT  93 7
    AM1_0116  121466 ..  121490 -  -2.1  -3.61715   GACGCTGTTGAAGAA          GCGATCCGT ATCCTTA ACGAATCGG          GTGAGGCTTATGCAG  50 229
    AM1_0108  116357 ..  116382 -  -6.2  -2.78547   TTACCCGATCAAGTA         CTAGCAGAAG TTGAAT CTTCCACTAG          CGAAGTTCAATAAAA  55 80
    AM1_0103  105548 ..  105562 -  -7.2  -2.81312   AAGCGATGGACCAGA               CCAATT CTG AATTGG               AAGGCGGCGCTGTCC  57 198
    AM1_0101  103051 ..  103105 - -13.4  -3.86266   ATACGACTACAACAA GAATAAGTAAATTAATAATTGTATTT GAG ACAAGCAATTATTAATTTACTTATTC TTAATATTAATATAC 100 192
    AM1_0099  101367 ..  101377 -  -5.4  -3.93353   AAACCAACAAAAAAT                 CGTT GCA AACG                 TTTGTAATTTGATTC  63 133
    AM1_0095   98742 ..   98752 -  -2.6  -4.35518   AACTGTACATCAAAA                 TATA CTC TATA                 AGTAGCTCAACCTTG  59 295
    AM1_0092 NONE
    AM1_0091   97776 ..   97787 -  -4.4  -4.02653   AATTAACTTAAAGAA                TCAG AAAA CTGA                 ATGGATCGGTTATTG  59 1
    AM1_0090   95485 ..   95496 -  -2.2  -4.01853   CAACACCATTAGAAA                CAAC GGGC GCTG                 AGAACGAAGCGAAGT  55 192
    AM1_0087   93113 ..   93124 -    -3   -3.9392   GGTGATCCCAAACAA                TTTC CTGA GAAA                 TACAGACAAGCCTCA  54 358
        secD   91011 ..   91027 -  -6.5  -3.54424   TCGGATCGCCTTAAA              CTCGCCC TCA GAGCAAG              GCTGGTTGTTACTGC  61 198
    AM1_0074 NONE
    AM1_0073   73875 ..   73887 -  -6.3  -2.76171   ATGCACCTAAGAGTA                TCCTT TTG AAGGA                CAAACAGGGAACTAA  55 37
        idiA   71741 ..   71760 -  -6.4  -3.31263   AGTCTATTTGCACAA            GCTGGCTC CAGC GAACCAAC             GATACCTGCATAATG  59 255
        typA   63263 ..   63276 -  -6.7  -2.79098   GCCATTGATTAACGA               GGTTG CACA CAACC                TTACCAAAATTGAGT  57 57
    AM1_0066 NONE
    AM1_0065   62390 ..   62402 -  -3.4  -4.07618   CCGGTAACAATCAAA                TGAG TACTT CTCA                AATTTGGACTTTCAT  58 101
    AM1_0064   60565 ..   60578 -  -5.3  -4.95806   AAACCACCATAAAAA               CAGAT TGTT ATCTG                CCATTTCGATGATGT  78 488
    AM1_0063   59899 ..   59919 -  -8.3  -3.61715   GAGGGCGTTGAACAA            GGCGTTG GAGCGGG CAACGCC            TGAGATTCACCATTC  71 402
    AM1_0056   55927 ..   55953 -  -2.4  -2.57132   CTGCCTCTTGAGAAC         CACCAATAGA CTATCGC TCTATTAATG         CTTTGAGGTTAGATA  40 9
    AM1_0055 NONE
    AM1_0054   53276 ..   53292 -  -4.3  -4.41348   TCCTTTCGAAACAAA              CGATTGG GGG CCTACCG              CGCCTTAGCAACGGA  65 162
    AM1_0052   52306 ..   52351 -   -10  -4.45738   GACCTGAACAAGAAA GCAGTAATAATTCGATATAG TATTAC CTAAATCGAATCATTACTGG AAATGAATTTAAAAT 100 34
    AM1_0051   51120 ..   51154 -  -5.1  -4.28774   TTATTTAATCTAAAA     GTATTTCAGCCAATA ACAAA CACAAGCTGAAATAC     TTTTAGGATATTTAT  68 50
    AM1_0050 NONE
    AM1_0049   49499 ..   49512 -  -6.7  -3.46068   CCTCTAATCTAAATA               CTGAG TTGG CTCAG                CTCAATGATCAGATG  61 304
    AM1_0041   43239 ..   43253 -  -8.6  -5.35815   CACACTAAATAAAAA               TAGCCA AAT TGGCTA               CTTGAGATGGAAACA 100 172
    AM1_0040   41172 ..   41192 -  -3.3  -3.60151   CTCGTCAAATCAGAA            TAACACC CAATTCT GGCGTTA            AACATCCTTAAATGT  51 252
    AM1_0039   40865 ..   40881 -    -3  -2.68799   ATCAAACCGAGATGA             TCATGCC ATAT GGC-TGA              CAGTTCGGCACTTAT  42 136
    AM1_0038 NONE
    AM1_0037 NONE
    AM1_0036 NONE
    AM1_0035   37044 ..   37056 -  -5.5  -2.76492   GCAGTTAGTCTAAAT                CGTCC ATT AGACG                TTCCTCCAGCAGAGG  50 2
    AM1_0034 NONE
    AM1_0033   35174 ..   35212 - -24.8  -5.09426   TGCAAGCCCAAAAAA   GCCAACAGCGGTCTTCTA TGC TAGAAGGCCGCTGTTGGC   TAAGGTATTTAAGAT 100 187
         pao   33125 ..   33135 -  -6.8  -3.61398   CGCCTTCCTCAATAA                 CACC TTG GGTG                 ACGCTATTCCTTGGA  61 249
    AM1_0027   29945 ..   29958 -  -3.8  -3.73224   GCAGCTGCCATCAAA               GCCA GAGACA TGGC                TAAAGCCGCAGGCCA  55 465
    AM1_0024   27082 ..   27093 -    -3  -3.37975   ACGGAGCATTCATAA                GTTA GTAC TAAC                 GAAAAAGTGGGAAAA  47 353
    AM1_0023 NONE
    AM1_0022 NONE
    AM1_0021   21813 ..   21843 - -12.7  -2.81535   TATGGAAAGACAGCA       GAAAGCCCACC TTTTTAATG GGTGGGCTTTC       TAATAGCTAATTCTC  89 111
    AM1_0020   20328 ..   20359 -    -3  -3.60818   CTAAAACTTCTCAAA      CAGCCTC-TCACTTT TCT ACAGTAAAGCGGCTG      CTCTTTCAGCTAAAT  51 9
    AM1_0018 NONE
    AM1_0017   16461 ..   16473 -  -4.1  -3.25729   TACAATGAGGATTAA                CCTGA TAT TCAAG                CACATTTTCAACTGA  51 41
    AM1_0016 NONE
    AM1_0015 NONE
    AM1_0014   11539 ..   11561 -  -6.2  -2.72639   ACCGTTAAATAATAG           CCCCTATTCC CCC GGACTAGGGT           TCGGGAGAACGCTAT  54 6
        sppA    9166 ..    9182 -  -8.1   -2.8655   TTGACCCACATCACA              GAAAATC TGC GATTTTC              CATACTAACTGTTTA  61 118
        aroH NONE
    AM1_0009    8054 ..    8064 -  -2.4  -3.05844   TTTTGGACCTTAACA                 GGCG CGT CCCC                 TAGACAGGCACTATG  42 87
    AM1_0003    1388 ..    1401 -  -2.3  -2.53164   TTACCGATGAGCAAC               CCTCG TTTG CGAGT                CAGTGGGGTTAGCAG   0 251
