    Ajs_0001     705 ..     731 + -12.2  -3.23899   CCTGAACTTCCACGG         CGCCGCTTGCGG CGG CCACAGGCGGTG         TTACCTTCCTTCACC  70 36
    Ajs_0002    2056 ..    2105 +  -2.5  -2.96899   CCGCCGAGCCCCTTG GCCGGCGCCAGCCTGGGC-CGC TCCTGAC GCGCGCCATGGCCCGGGCCGCC TCTCGTTCCTTCCCG  41 159
    Ajs_0003    4166 ..    4202 +  -2.4  -3.76968   CTCTTTAAGCCCAAT   TGGCCTG-TAACGCTTGT CCA GCAAGCGCTAACAG-CTA   TTTAATCGATAGCTT  52 33
    Ajs_0005    6399 ..    6411 +  -2.6  -4.87665   AGCCCGCGCCATTTT                GTGG ACAAG CCGC                TTTTTCTGAATGGCG  74 191
        rdgC    9386 ..    9414 +  -4.4  -4.07568   CCTCACCGTCCAGCA        CGCGGTGCAGGC GGTCG GCATCCAGCGCG        TTTTCCCAGCGCGAC  62 174
    Ajs_0010   13613 ..   13628 +  -3.2  -4.59773   CGCGGCCTGGGTGCG              GCTGTA GCAC TCCAGC               TTTTTCAGGATGGCC  71 156
    Ajs_0012   15533 ..   15548 + -10.4  -5.47218   CTCTTTCCCCAAAAA              GCGCCT TGTC AGGCGC               TTTTTTTACGTCGAA 100 53
    Ajs_0013   16733 ..   16748 +  -6.1  -3.58726   CTGCACCTTCAGGCC              GGTGC GCTGCA GCACC               TTCTGTGTGGCGGGC  56 486
    Ajs_0019   21807 ..   21823 +  -7.3  -3.01791   ATTTCTCTGGCAAAC              TGCAACG TTT TGTTGCA              TATTGGCGCGCGGCT  54 71
    Ajs_0020   23658 ..   23673 + -10.4  -5.77853   AACAAACCCTCCTTG              CGCACC TTCG GGTGCG               TTTTTTTTGCCCCTT 100 86
    Ajs_0026   29914 ..   29927 +  -2.3  -2.62184   CGGATGGGGTGGAGA               CGGTC GCAT GAGCG                TGGTGTCGAACACAA  38 15
        gidB NONE
    Ajs_0028 NONE
    Ajs_0029   32068 ..   32078 +  -6.8  -3.67597   TTACCGGTCAAAATA                 GCCT CCA AGGC                 TTATTGGATAAGCGC  59 56
    Ajs_0030 NONE
    Ajs_0031   33660 ..   33675 +    -6  -2.71144   ATCGAGCGCCTGCGG              GGCGGC TGAC GCCGCA               TCGTTGCGGCCCGTG  46 17
    Ajs_0032   34555 ..   34567 +  -6.9  -2.62616   GACTTTGCATTCACA                TCGGC CAC GCCGG                TCCTGTACCGGGTGC  48 89
    Ajs_0033   35716 ..   35744 + -23.9  -4.99134   CGCCCCTGAAAAAAA        CGCCAGCGCGGCT CAA GGCCGCGCTGGCG        TTTTTGCTTTCAACT 100 49
    Ajs_0036   38455 ..   38472 + -10.5  -3.06815   GTGCGGGGACGTCGT             GCGCCGG GTCG TCGGCGC              TGTATTGGAGCGGCT  60 315
    Ajs_0039   41536 ..   41546 +  -8.2  -2.87132   GCTGATGGCCTTGCA                 GCCG GGG CGGC                 TCTGTACGGCGGCAA  54 484
    Ajs_0043   45303 ..   45315 +  -4.7  -2.98823   CAGGCCGCAGGCTGT                GGGCC GCA GGCGC                TGTCTCTGGGCGCGA  47 177
    Ajs_0045   47318 ..   47344 +  -3.7  -4.11692   CACGGGCCGCTTCAT        CGCCTGAAAGCGG CAC CCGC-TG-AGGCG        TTTTCCGCCTCCGTG  63 19
    Ajs_0047   50023 ..   50044 + -11.5  -3.34192   TGGATACGGGAGCGC           GCCTGGGCG CTTC CGCCCAGCC            TTACTTGCCGCGGTT  69 139
    Ajs_0053   57713 ..   57748 +  -3.1  -3.33492   GCCGGCGAGGTGCCG    CCGGCCAGGTGCGACC GGCGA GGT-GCGGCCGGCCAG    TTGTCACGTGCGTGG  46 52
    Ajs_0054   60467 ..   60507 + -10.4  -2.62184   GAAGGGCTCGTGCGC GGCCTC-GGC-CAGCGCGAT GGC GTCGCGCTGCGCCAGCGGGC TGCTCTCGGCCACGG  57 428
    Ajs_0056 NONE
    Ajs_0057 NONE
    Ajs_0058 NONE
    Ajs_0059 NONE
    Ajs_0060 NONE
    Ajs_0061 NONE
    Ajs_0062   68301 ..   68317 +  -2.2  -3.37487   CGATGTGGAAATGAC              GCTCTG AAAAC CATAGC              TGTTTGCGCATATCA  45 19
    Ajs_0063   69185 ..   69195 +  -8.2  -3.59979   GCCTTCATCGAGAAG                 CGCG CCC CGCG                 TTTCCAGTAGACCGA  65 5
    Ajs_0064   70071 ..   70094 +    -8   -5.0538   ACACTTTGCGGCTTC          GAGGCGGCGC CCGT GCGCGGCGTC           TTTTTTCCCATCCGA  93 210
    Ajs_0065 NONE
    Ajs_0066 NONE
    Ajs_0067   72077 ..   72101 + -11.4   -3.5511   CGGCCGGGCGTGCCC         G-CGCTCCGGC GCAA GCCGGGGCGGC          TATTTCTCCATCGGG  73 78
    Ajs_0069   73633 ..   73644 +  -7.2  -4.42238   GCAATAAACCACATC                GCGC GCCC GCGC                 TTTTGGTTAGGCTGG  81 108
    Ajs_0070   75135 ..   75175 +  -8.2  -2.64616   GTACTGCGGATCTCC GCCTTCCTCGGGCGTGCGCG TGT CGCACACGCC-G-GGCAGGA TGGTCTCAATGCGGC  52 281
    Ajs_0072 NONE
    Ajs_0073   78413 ..   78424 +  -4.4  -3.98658   TGGCGCCTGTTGTCT                TGAC TTCA GTCA                 TATTTTTGATGCGGT  61 504
    Ajs_0077   80910 ..   80927 + -12.7  -4.84527   CGCCAACCGACAACA             GGGCACC TTCG GGTGCCC              TTTTTGCTATGTGCG 100 61
    Ajs_0084   90487 ..   90504 +  -9.1  -2.56596   CCGTCCGGGCCCAGG             GCACGCT GGCG GGCGTGC              TGCATTCCTGCAGCA  54 88
    Ajs_0090   99935 ..   99958 + -11.6  -3.01924   CACGGAAACCCTCGG          CGTCGGTGCG CACG CGCTCCGGCG           TGTTCCAGCGCCGTG  65 246
    Ajs_0093  104415 ..  104447 +  -9.9  -3.25652   TTTTGAAACAAAATT      GCCTCTAGCGCTTAT CCA GTAAGCGGTAGAAGC      TATTAATTGAGTAGC  66 55
    Ajs_0094  105577 ..  105593 +  -2.1  -3.18274   CCGACGGGGCCTGGC              TAGGGCG AAA CACCCGA              TTCCCTTGCCATCGC  43 23
    Ajs_0095  107051 ..  107071 + -11.1  -2.62792   ATCGTGGAGTGCTGA            CGCGCTACG ACC CGTAGCGCC            CTGTTTCCCATACCT  62 26
    Ajs_0096  108385 ..  108396 +  -2.2  -3.18264   CGTCCTTTCAACCTG                CCTA AGCA TGGG                 TTGCTGAATCACGAA  43 92
    Ajs_0097  109453 ..  109472 + -12.8  -4.22652   CCCTCGAATAACCCG            GGCGGGGC GCGC GCCCCGTC             TTTTCACTGCTCTCC  89 30
    Ajs_0098 NONE
    Ajs_0099 NONE
    Ajs_0100  112780 ..  112794 +  -8.5  -3.14132   AGCTTGCAGCAGGCG               GCCCC AGACG GGGGC               TTCCTGGGCCCACAG  56 89
    Ajs_0105 NONE
    Ajs_0106  120130 ..  120165 + -11.9  -2.55351   TCCGGGAAGGGGGAC   GCAGCCAGCGCGGCGGG GCGG CCC-TTGCGC-GGCTGC    CTTGGTCTGGGCAGC  65 93
    Ajs_0107  121046 ..  121056 +  -8.2  -3.11072   ACGCCCGTCCATAAA                 GCGC AAT GCGC                 TATCTATTAAATAGC  57 58
    Ajs_0108  122114 ..  122138 +  -4.9  -2.75064   GCAGCTGGACTGAAA          GGAGGGCGC CATGGCT GAGTCCTCC          TCCTTCGCTGGCCGC  44 28
    Ajs_0109 NONE
    Ajs_0110  123708 ..  123718 +  -2.4  -2.64155   CGATGCCCTTCCAGT                 GGCC GCA GACC                 TGACTTTGAAACAGG  38 12
    Ajs_0111 NONE
    Ajs_0112  125843 ..  125889 +   -13  -3.05384   ACCGCGCGGTAGGGC TC-CAGCCCGGCGCTGGTGGCC CAGGC GGCCAC-GGCGCCGGTCAGCGA TTGCATCAGCGCCAC  70 162
    Ajs_0120  135353 ..  135388 + -14.1  -3.02144   ACAACCCCCTGAGGC   GCTGCGCGCCTC-GGTG CAGC CGCCAGAGGCG-GCAGC    TCTTCGGGGCCGTCC  75 46
    Ajs_0121  136501 ..  136538 + -10.7  -3.35679   TGAGCTATCAAAAAG   TGAGCTGCCGGCGCTT CATAGGT AAGCGCTGG-AGCTCG   TTCTGAATCAAAAAC  69 38
    Ajs_0122  137472 ..  137489 +  -4.7    -3.794   TCCGCGGCCATCGGA             CCGGTGC CGTC GCGCCAG              TTTCATGGGTTGCGG  58 136
    Ajs_0123  138817 ..  138853 + -11.7  -4.50241   TTTAGTCAAACTTTA    TAGCTACTAGCGCTTAT CAG ATAAGCGTTAGAAGCCA    TTTTCATTCATATTT 100 23
    Ajs_0124  140186 ..  140203 + -10.5  -3.65046   GGCTGCGGCGCAAGG             CGCGCGC CAGC GTGCGCG              TTGTTGGCCTGGCCC  70 120
    Ajs_0125 NONE
    Ajs_0126 NONE
    Ajs_0127  143842 ..  143855 +  -3.7  -3.69354   GCCGGGTTGATGCCG               CGGCG AAGA CGCCC                TTTCAGATTGTCGAA  56 31
    Ajs_0128 NONE
    Ajs_0129 NONE
    Ajs_0130  146689 ..  146736 +  -8.2  -3.15861   CAACATGGTGCGTGA GGCGC-GCGCCGCATGAGCGGGG CTC CGCCGCTGGTGGACCGCAGCGCC TTCATGCGCCTGATC  58 10
    Ajs_0131  147122 ..  147134 +  -3.3  -3.48276   TTGATTCAAAAAAGT                GAGCT GTT AGCGC                TTGTCTAGCAAGGGC  49 24
    Ajs_0133  149511 ..  149523 + -10.5  -2.62184   CAGCTGCAGGCGCTG                CGCGC GCA GCGCG                TGCTCTGAGGCGGCG  59 5
    Ajs_0138  154791 ..  154826 +  -3.3  -5.28683   GTGCTCCTTAGTTCA    TAGCTGCTTGCGCTTG ACTGG TAAGCGCTAG-AGCCA    TTTTTTACTCTTGCT  85 30
    Ajs_0140 NONE
    Ajs_0141 NONE
    Ajs_0142 NONE
    Ajs_0143  159445 ..  159481 + -15.3  -4.33151   TTGCTATGAAATAAG    GAGCTTTCAGCGCTT GATAGAA GGGCGCTGAAAGCTC    TTTTGGCTTGTAATC 100 49
    Ajs_0146  163122 ..  163140 +    -6  -4.01902   GCTGCGACTGTTACG             GGAGCA GGGCTGA TGCTCC             TTGTTTGATAGCTGT  65 13
    Ajs_0147  166221 ..  166236 +  -2.4  -3.56092   GTGGAGCGCGCGCTC              GCGCCG AATC TGGGGC               TTTAGCGCCTGGTCG  49 5
    Ajs_0148 NONE
    Ajs_0149  168509 ..  168526 + -14.1  -4.84527   CCGCAAGAGAACCAA             GGCCCCG CATG CGGGGCC              TTTTTCATGTCTGAG 100 50
    Ajs_0151  170207 ..  170236 +  -8.6  -4.34402   AGCCTTGGCGCCGGT      GCCGTGGCGGCTGC ATGC GCAGCC-C-GCGGC       TTTTCCTCTGGCAAC  79 95
    Ajs_0152  171161 ..  171184 + -13.8  -4.08692   CTACGAAAATAAAAG          CGGCCTGCGC TTGC GGGCAGGCCG           TTTTGAGGGGGATTG  90 81
    Ajs_0154 NONE
    Ajs_0155 NONE
    Ajs_0156 NONE
    Ajs_0157  177301 ..  177339 +  -2.1  -2.77895   CGGCACCTGGATCAG   GCCCAGCCCCGCCAGGC AGCCG GCCATGTAGGCCTCGGC   ATTGTTCACCGTGAG  38 260
    Ajs_0159  178939 ..  178961 +  -7.6  -3.85891   TTCGTTTGACGCCCG           GCAGCGGGGC TGC GCCTGGTTGC           TTTACTGCATTTTTG  68 32
    Ajs_0162 NONE
    Ajs_0163 NONE
    Ajs_0164  185246 ..  185264 + -17.4  -4.86731   CCTGTCCCGTTTTTG             GGCCCGCC CTT GGCGGGCC             TTTTCTTTGGGCGGC 100 103
    Ajs_0165 NONE
    Ajs_0166 NONE
    Ajs_0167 NONE
        glcF  189554 ..  189587 + -14.5  -3.54424   CGGGTTTTGACCGCC     GCGCGGGG-CGGGCTT TCG GGGCCCGGCCGCGCGC     TTTCGAGCCATGAAC  85 44
    Ajs_0169 NONE
    Ajs_0170  190964 ..  191018 +  -5.4  -3.74184   GCGCTGAGGCGCCGG CTCGCACACCCTGCTGACACCCCGTT GTC AGCAGGGTGGCGGCAGCATCGGCGCG TTCTTGGATTCCGTT  58 34
    Ajs_0171 NONE
    Ajs_0172  192426 ..  192441 + -11.8  -3.22388   GGCACGGTGAGAGCC              GCGGGC CGTA GCCCGC               TTGCTGCCTTGGCTG  70 127
    Ajs_0176 NONE
    Ajs_0177  197180 ..  197198 +  -6.6  -3.01712   ACCTTGGGAAACTGC             GCGATGTC CAC GCCGTCGC             TCTTGAGCCAGCCCG  51 1
    Ajs_0180 NONE
    Ajs_0181  200065 ..  200079 +  -3.5  -3.48276   GTAGAATTGCGTGCT               TTGCG ACCCA CGCAG               TTCTCTCGAAAAGGA  49 37
    Ajs_0182 NONE
    Ajs_0183  201291 ..  201315 +  -4.2  -3.45571   TCGAGCATGCTGGCA         C-CATCGCTGC CTCG GCTGCGGTGCG          TTGATATTTGCACGG  51 67
    Ajs_0184 NONE
    Ajs_0185 NONE
    Ajs_0186 NONE
    Ajs_0187  206045 ..  206076 +   -10  -2.57344   GCACGGCCCTGGGCA      GCGGCGGCGCGGCGC AGG GCGCCG-GTCAGCGC      GTTCTGCACCGGGTA  57 222
    Ajs_0190  209692 ..  209729 +  -5.5  -2.78596   CGCGAGCAGCGCCTG   CGCCGTGGCGTGG CCCGCCAGCTCC TCGCGCCAGGGCG    TGTACTGCGGCCATG  45 489
    Ajs_0195 NONE
        dinD NONE
    Ajs_0197 NONE
    Ajs_0198  218530 ..  218564 + -18.7  -4.61231   TGATATTGTTTTGAT     AGCTTCCAGCGCTTG TCTAT CAAGCGCTGGAAGCC     TTTTTGGCCCTGTGC 100 44
    Ajs_0200  220693 ..  220710 +  -9.8  -3.20435   AATAATGAAGTAAAG             CGCGCG GCACCA CGCGCG              TTGCTCGATAGTTGC  64 63
    Ajs_0201  221688 ..  221717 +  -5.5  -3.14132   GGCGTTTGTTACAGC       CGGCGGTCAACCT GGCC GGGCGGGCTGCCG        TTGCTGAAAGGCCAG  51 54
    Ajs_0202 NONE
    Ajs_0203  223080 ..  223118 +  -3.7  -3.75629   TTTGCTACTTTATTA   GTAGCTGGCAGCGCTCG TTGTT CAAGGGCTGGCAGCTGA   TTTGACTTGAAGCTG  56 41
    Ajs_0206  226101 ..  226120 +  -2.8  -2.52464   TCTGCGTCAACAACC            GG-GTGCAG CGT CTGGACACC            TGAGTTCCCGAGAGC  39 3
    Ajs_0207 NONE
    Ajs_0208 NONE
    Ajs_0209 NONE
    Ajs_0210 NONE
    Ajs_0211  230944 ..  230972 +  -8.1  -3.19653   CCACGCTGATGCGAC        GTTCGCGCAGC GCCTGCA GCTGCTCGGAC        TTGGTGAGGTTGTGC  54 518
    Ajs_0213 NONE
    Ajs_0214  232959 ..  232986 +  -8.2   -4.2828   GGGCGTGGAAGGGCT        GCAGGGCGCCAG CGTG CCGCCGCCCGGC         TTTTACTACCTGGGC  79 162
    Ajs_0217 NONE
    Ajs_0218 NONE
    Ajs_0219  236662 ..  236698 +    -5  -3.66772   GCGCTGGGGCTGGAT   TGCTGAGG-ATGCCCGG CATC CCGGACAAGCCGCAGCG    TTGTTCAACATTTCC  55 20
    Ajs_0220  238200 ..  238232 + -16.5  -2.62983   TTCTAAGCCAAATCG      GCTTCTTGCGCTT TCTGGAT AAGCGCAAGAAGC      TCCTATAAAAATAGC  80 35
    Ajs_0221  239107 ..  239119 +  -3.3  -3.57144   GAGGCATCCGCCGAC                GAGCC TCA GCCTC                TTTAACCCTGACCGA  51 8
    Ajs_0222  239929 ..  239945 +  -2.1  -3.25823   CCATCGGCGGCATTG              GCGGCTG CTC CGTTCGC              TTCATCTGACACAAG  45 0
    Ajs_0223 NONE
    Ajs_0224 NONE
    Ajs_0225  242731 ..  242746 +  -7.5  -5.14563   CTGCGCTTTGCCTGA              GGGGC CGCGTC GCCCC               TTTTTTGATGCAACC  93 26
    Ajs_0226 NONE
    Ajs_0227  244002 ..  244028 +   -11  -2.64973   GCGGCAAAAATAGCA         TTCAGCGCTT ATCCAGC AAGCGCTGAA         TGCTATCAGGTTGAT  62 48
    Ajs_0230 NONE
    Ajs_0231  247575 ..  247587 +  -3.3  -3.12351   TGGCGGTCGACGGCG                CGCAC CTG GTGAG                TTCGCTATGAGCGGG  44 3
    Ajs_0232  248789 ..  248803 +  -2.8  -3.76224   CGTGGTCGCTGAACT               TCTGCG CCT TGTAGA               TTTCCTCGGTACGCG  56 180
        pyrE NONE
    Ajs_0235  251030 ..  251045 + -10.4  -4.67552   CGGCACACAAAAAAA              GGCTCC ACCG GGAGCC               TTCTTTTTTGATAGC 100 43
    Ajs_0239 NONE
    Ajs_0240 NONE
    Ajs_0241 NONE
    Ajs_0242  259431 ..  259473 + -21.2  -3.14931   CCTGCACCGCCGCCA TGCGTGTGGCGCGCAGCGGC TGG GCCGCGGTGCGGCGCGCGCA TTCCTCCAGCGTGAG 100 416
    Ajs_0250 NONE
    Ajs_0251 NONE
    Ajs_0252 NONE
    Ajs_0253  270294 ..  270314 + -14.1  -5.75342   CCCTTCCCACCCCCA            GAGACATGC TGC GCATGTCTC            TTTTTTTTGCCCGCC 100 50
    Ajs_0254 NONE
    Ajs_0255  271402 ..  271420 + -17.4  -5.60993   CGGCAAACATGTGCA             GCCCCGCC TCT GGCGGGGC             TTTTTTTGTCCCCCA 100 43
    Ajs_0256  272128 ..  272160 +  -9.8  -2.55999   GACAGGTTGTGCCGG     AGTGGCGCGGTGTGG CGTC CCGCGCC-CGCCACG      GTTGCTGTCGCGTCG  59 114
    Ajs_0257  273460 ..  273476 +  -3.5  -4.08216   GCACCACGGCGATGC              TGCTGCC CGC GGCCGCC              TTTTCGGCGCCCTGC  61 334
    Ajs_0260  275352 ..  275390 +  -6.1  -3.73936   AATTTATAGAGAAAA  TC-A-CTGCTAGCGCCCAC CTG GTAAGCGCTAGCAGCTAGA  TTATTGATAGCGTTT  60 41
    Ajs_0267  283725 ..  283742 +  -8.3  -5.48825   CGCGGCGGGGTTTTC             CGCCCGG ATTT CCGGGCA              TTTTTTTGCCTCGTG 100 144
    Ajs_0268  284235 ..  284271 +  -2.7  -3.37344   GTTGGTGGTCGTCAA    GCCGTTCTGAGATGCAG CGG CTGCAGCGTTGCCCGGC    TTCGTTCCCTCGCAA  45 16
    Ajs_0269 NONE
    Ajs_0270  285822 ..  285857 +  -4.7  -3.37344   TTTTTGTAGTGTTTT    GGGCT-CCAGCGCT TTCCCATCC AGCGCGGGCAGCTC    TTGATTGGATAGCAA  50 57
    Ajs_0271  286542 ..  286565 +    -8  -4.33851   CGGCACCATTTCTCT          TGTCCCGGCC ATGC GGTCGGGCCG           TTTCTTCTCCCGTTT  76 46
    Ajs_0272  287847 ..  287867 +  -8.3  -3.76815   TGGTACATTAGAAGG            CTTTTCGGA ATT TCCGAAGGG            TTTCACGTTTTCGCT  69 108
        rpsL  288276 ..  288302 +    -5  -3.71645   AGTACGGCGCGAAGA         AGCCCAAGGC CAAGTAA GCCCTGGGCC         TTTCGGTCTGAGATT  58 9
    Ajs_0274  288979 ..  289009 + -16.9  -3.18366   TCGGTACACGATAAA      GGCCGCTGACGTGC TGAA GCACG-CGGCGGCC       TGTGTTGATTGAGGC  89 68
    Ajs_0275  291223 ..  291259 + -13.1  -3.89695   GCATGTAAGCCAAAA    GAGCTGTTAGCGCTTAT CTG ATAGGCGATGGCAGCTC    TTGTATTTATAGCAA  83 46
    Ajs_0276 NONE
        rpsJ  292972 ..  293000 +   -14  -3.60419   ACCGGGCGCCCCCAA       CGCGGACTTGCTT GTAA AAGCA-GTCCGCG        TTATAATTTGCGGCT  81 81
        rplC NONE
        rplD  294457 ..  294472 +  -3.2   -3.5393   TCAAGGAGATGTTCG              CATGAG CACG CTCAAG               TTTGACGAAGGTCGT  51 21
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP  297527 ..  297537 +  -2.4  -3.32844   TGCCCGTCAGATTGG                 CGCC TAA GGAG                 TTATCAAATGACCAA  45 19
    Ajs_0286 NONE
        rpsQ  298051 ..  298081 + -19.2  -4.56597   CGTCTGCGCGCCTCC       GAGAAACGACCCAC AAT GTGGGTCGTTTTTC       TTTTTGGGGCCCGCA 100 55
    Ajs_0288  298700 ..  298726 +  -8.7  -4.04415   CGCCGCAGGCGAAAC        GCCGCCC-CGTC GCGA GATGCGGGTGGC         TTTGCTATTATTTGA  73 83
    Ajs_0291  300702 ..  300727 + -13.4  -4.30719   TGCATAAGCGCGAAA         GGCCGATTTC GTTCAG GAAATCGGCC          TTTCTTCTGAAGAAA 100 74
    Ajs_0293  302063 ..  302095 +  -5.4  -2.77701   AGCCTGGCGCTGCAG      CCATGAGCGTGCTC ACGCG GCGCACGGCCGTGG      TCGTCTTCCTGGCCT  44 20
    Ajs_0294 NONE
    Ajs_0295 NONE
    Ajs_0296 NONE
    Ajs_0297  306187 ..  306220 +  -8.7  -3.62859   AACTGGTAATCGGAG     CCGGGGCGCGCTTCT TTGT ACAGGCGCGGCACGG      TTTCCAGGTTGTGGT  65 437
    Ajs_0301 NONE
    Ajs_0302 NONE
    Ajs_0303 NONE
    Ajs_0304 NONE
    Ajs_0305 NONE
    Ajs_0306 NONE
    Ajs_0307  313310 ..  313326 +  -4.4  -2.71202   GTGCCGCGGCAGTCT             GACGCCG CCTT CGG-GTC              TCGGTTTAAATTTTT  42 24
    Ajs_0308 NONE
        atpC  315279 ..  315294 + -11.8  -4.58466   CCTTTCATCGCAAAA              GCCGCC TTCG GGCGGC               TTTTGTCGTTATGGG 100 52
    Ajs_0310  316478 ..  316490 +  -3.3  -2.72829   GCGGCCGGAGGCACC                TCCTG ATG CAGGC                CTTTGCCGCGCTCTA  40 20
    Ajs_0311  318205 ..  318217 +  -4.7  -2.79671   GGCGCTGGATGGACG                GGCGC TGC GGGCC                ATTTCCCCTTGAAAT  44 68
    Ajs_0312 NONE
    Ajs_0313  322123 ..  322160 +  -2.5  -3.97511   CGGCCACGATCTCGA   TGGCATGCTCGGCCAGC ATCA GGTAGATGAGCACGCCG    TTGTTGTGTTCGGTG  56 304
    Ajs_0317  324597 ..  324615 +  -2.3  -3.92373   CTGCTGCATTGATGC             CAAGCCT TTGAT GGGCTGG             TTTATGGGTCAAATG  54 29
    Ajs_0318 NONE
    Ajs_0319  326723 ..  326735 + -10.5   -3.7941   TTCGGGGTTGGCGGA                GCCGG CCG CCGGC                TTCTTGTCGGCCGTG  74 498
    Ajs_0324  334170 ..  334215 + -12.5  -3.13403   AGCTGCGCCTGCATG CGTACCGACGGTGCCAGCACCA TCA TGGCGTAGGCGCCG-CGGTAGG TGTTGATGGCCACGG  69 486
    Ajs_0326  336595 ..  336624 + -10.8  -4.76963   TTAAGCGATACAAAA       GGACAGCGGCTCC GTGCA GGAGCT-CTGTCC       TTTTGTGTTCTATAC 100 121
    Ajs_0327 NONE
    Ajs_0328 NONE
    Ajs_0329 NONE
    Ajs_0330  343269 ..  343286 + -11.3   -5.4505   GCGCCACATTCCCCA             GCCCTTG TTCC CAAGGGC              TTTTTTGTTCCCACC 100 140
    Ajs_0331  343779 ..  343798 +  -7.1  -3.05463   CTGGCAGGGACCGGA            GGCCC-GC AGTAG GCAGGGCC            TTCGATCCAGCCGGT  51 44
    Ajs_0332  344451 ..  344465 + -11.4  -2.62184   CCTGGCGCACAGCCC               GGCGCA CCG TGCGCC               TGGTGTCACCGGCCA  62 43
    Ajs_0333  345169 ..  345212 +  -8.4  -3.81027   AAGGCCCGGAGTTCG TCGTT-GGCGGCGGTG-TGGT CCTTC ACCAGCATCGC-GCCAAACGA TTTCACTTCGTTGGC  68 458
    Ajs_0339 NONE
    Ajs_0340 NONE
    Ajs_0341  351445 ..  351469 + -14.2  -4.46212   GGGCAAAAAAAGAAA          CCCCGCGGGC GGCAG GCGCGCGGGG          TTTTCTCGTGCAGGC 100 53
        argS NONE
    Ajs_0344 NONE
    Ajs_0345  355053 ..  355070 + -14.1   -5.1675   CGCCACCAGCGACAA             GCGCGCC TACG GGCGCGC              TTTTTTCATGCCTGC 100 51
    Ajs_0346 NONE
    Ajs_0347 NONE
    Ajs_0348 NONE
    Ajs_0349 NONE
    Ajs_0350 NONE
    Ajs_0351 NONE
    Ajs_0352  362081 ..  362105 + -12.2  -4.55887   TGTTACCGACCGCTG         CGCCCCATTGC CTTG GCA-TGGGGCG          TTTCTGTTTTTAAGG 100 310
    Ajs_0353  363111 ..  363144 +   -11  -3.11812   GGCGCGGCTTGACGC     GGCTGTGGCCAGGTG TGGCT CGCCTGGC-GCGGCC     TTGCCTGGTGTAGCT  67 29
    Ajs_0361  371437 ..  371470 +   -11  -3.53012   CGCGCGGCCTGGGCG    GCCGCCCCTGCCTCGC GTAC GC-AGGC-GGCGCGGC     TTTCCGCGGGCACGG  70 265
    Ajs_0363  372668 ..  372686 + -14.6  -3.51976   GCGTTGCCAAGCCTC             GCTGGGGT AGC ACCCCAGC             TTCGTTTGGCGCCTT  83 138
    Ajs_0366 NONE
    Ajs_0367 NONE
    Ajs_0368  378048 ..  378060 +  -3.3   -3.1247   CTGGATCAAAAATAA                GAGCT GTC AGCGC                TTGCCTGTAAACGAT  44 26
        trpD NONE
        trpC  380213 ..  380223 +  -6.8  -3.07043   CGACCCGGGGCGGGC                 GCTG GCC CAGC                 TGTTCGCCTGATGGC  51 4
    Ajs_0371  383045 ..  383061 +  -2.3  -3.28924   TGATGGAATGGATTA              GCTAT CGTAAAT ATAGC              TTGTAGCGCAGAATG  45 25
    Ajs_0372 NONE
    Ajs_0376  389361 ..  389380 +  -4.2  -2.57132   GGCCGCATAGCGCGG            CGGGCGTT GCAC AATGGCCG             ATTCTGCCGGCCGGA  41 53
    Ajs_0377  390348 ..  390358 +  -4.6  -3.65812   CCTGCGAGTTGCCCG                 GCGT CAC GCGC                 TTGTCTTGACGCAGG  55 6
    Ajs_0378 NONE
    Ajs_0379  392653 ..  392665 +  -2.6  -3.89822   TGCTGCGTCGTCCGC                GGGC CTTGT GTCC                TTTGTGCCCTCGGTG  54 150
    Ajs_0380  393608 ..  393643 +   -20  -4.58395   TTGCTACGCTAGTGA    TAGCTGCCAGCGCTTGA CTG TCAAGCGCTGG-AGCTA    TTTTTGACGCATGAA 100 29
    Ajs_0384 NONE
    Ajs_0385  399343 ..  399375 + -13.3  -3.72576   ACCCCCTGAGCCGCT      GCGCGGCTTCCCCCT GCG AGGGGGACGACGCCC      TTTGCTGCGGGGCGG  81 47
    Ajs_0386 NONE
    Ajs_0387 NONE
    Ajs_0388  401570 ..  401582 +  -3.3  -3.49419   CCAATAACAACAAGC                GCGAG TAG CTCAC                ATTTTTATAAAAGGG  49 103
    Ajs_0389  403455 ..  403470 +    -9  -4.56775   GGATCCGGTCACAAT              TCAGGG TAAA CCCTGA               TTTTTCCGCCAGGGT  91 80
    Ajs_0390  405144 ..  405164 +  -6.8  -3.85698   TGCGATACTGCCGGG            CTTCGCGT TAAGT GCGCGAGG            TTTCTGCCCAGCGGG  65 68
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE  408722 ..  408732 +  -6.8  -3.10056   TAAGCGCGGTAAGAC                 GGTC GAA GACC                 TCTTCGCTGCCTGAT  51 1
        rpmD  408937 ..  408947 +  -6.8  -3.21416   CTATCTGGTCAAAGT                 CCTC TGA GAGG                 TTGATGATGGAACTC  53 19
        rplO  409364 ..  409382 +  -8.1  -2.71763   GGCTGCCATCGAAGC            GGCC-GGC GGTA GCCTGGCC             TGATCTGGTTCTGAC  54 4
        secY  410731 ..  410785 +  -6.5  -3.73534   ATTAGGTACCTGATG TCCGTGTGCCT-TTGGCGAATGCGCTA TAG TCGCGGGTTCGCCAAGAAGCA-ACGGC TTATTGATGCCCTTC  62 28
        rpmJ NONE
        rpsM NONE
    Ajs_0404  411844 ..  411865 + -10.1  -2.53015   CTGGCGCGATGGTGG           CTCCCGCAG TCCG CTGCGGCAG            TCGATTCAAGGATAT  59 72
        rpsD  412545 ..  412560 + -10.4  -3.57561   GAAATCGTCCCTGAA              CCGCGA GGCA TCGCGG               TTTAGGCGCTTCACC  70 61
    Ajs_0406  413650 ..  413677 +    -7  -3.93288   AAAAGAGCCAGTGCC        TCGGGCAGTACCT GAT ACG-GCTGCCCGA        TTTAATTACATCAAA  65 62
        rplQ  414216 ..  414233 + -12.7  -5.74684   ATAGTCAGAGAAAAT             GGCCCAC TTCG GTGGGCC              TTTTTGTTTTTGTTC 100 149
    Ajs_0411 NONE
    Ajs_0412  420459 ..  420509 +    -9  -3.01712   GTGGCGCATGCCGGT CGGATGGG--GCGCTGGCGCTGCCG GCAC CGG-GGCGCCGGCGCGATTCAGCCG TGTTCGCCCGCGGCC  60 220
    Ajs_0414  421873 ..  421884 +  -4.4  -2.71011   CTGCAGGCGCCGCGA                TACC CGCA GGTA                 TCATTCACGGCCCAT  42 59
    Ajs_0415 NONE
    Ajs_0416  423252 ..  423263 +  -2.2  -4.13561   GCGCGGGCAGTGCGC                CTGG GGCC TCAG                 TCTTTTTTGGGCGCC  59 115
    Ajs_0421  427968 ..  427987 +  -2.1  -2.83403   GCCCTCTAGTTTTGA            CGGAGAT CCCCTC ATGTCCG             GTTTGCTGCCCGACG  40 51
    Ajs_0422  429169 ..  429183 + -12.8  -3.00704   CGCGGGGTGGCGTGG               GCCGCG GTG CGCGGC               TATGCTTTCCCGCAT  71 77
    Ajs_0423  430634 ..  430657 +  -3.1  -2.82623   AGCGTTTGCGGCGCC          CGGCC-TACC TGCAC GGTGCGGCTG          TGGTTCTGGCCGGCG  41 116
    Ajs_0431  440980 ..  441013 + -14.1  -3.18383   CCACGCGGCGGCAAG     GCGCAGAT-GCTATTT AAA AAATAGCTGTCTGCGC     TTGCTGCATGCGCCT  76 55
    Ajs_0432 NONE
    Ajs_0433  443740 ..  443769 +  -7.7  -4.07568   CGGCATAGTTCTTAG       GGAGTAGGGCGGC ATAG GCCGCGCTCGTCC        TTTTGCACCGCCCGC  70 52
    Ajs_0434 NONE
    Ajs_0435 NONE
    Ajs_0436 NONE
    Ajs_0437 NONE
    Ajs_0438 NONE
    Ajs_0439 NONE
    Ajs_0440 NONE
    Ajs_0441 NONE
    Ajs_0442 NONE
    Ajs_0443 NONE
    Ajs_0444  457541 ..  457567 +  -8.7  -2.91264   GACGGCCAGCCCGTG        CGGCTGGGC-TG ACGC CATGGCCAGCCG         TGTGTCCCTGCCCGG  55 14
    Ajs_0445  458079 ..  458097 + -10.2  -2.66979   ATGGGGCAGGAGATG             GCGCGTCG CCG CGGCGTGC             GTTGATTGCTATTGA  59 2
    Ajs_0449  461930 ..  461959 +    -5  -3.14132   GGTCATTTTGGGCCG       TAGC-GCTCGTCC ATCAA GCGCGAGCAGCTA       TTAATAAAAGAGCAA  48 46
    Ajs_0450  462970 ..  463008 +  -8.3  -4.81083   GGTTTGGTGCCAAAA  GTG-GCTG-TGCCGCTTGA CAG TCAAGCGCTATCAGCTCAC  TTTTTGATAGTTAAG  88 41
    Ajs_0452 NONE
    Ajs_0453  467725 ..  467749 + -15.7   -5.1287   CGGCTGACATGCCCA          GGCTCCACCGT TGC GCGGTGGGGCC          TTTTTTACATGTCCG 100 74
    Ajs_0454  468899 ..  468910 +  -4.4  -2.81208   GGAGGCTTTAAAAAA                GAAC GGTC GTTC                 GTGTTTTGACTACAC  42 47
    Ajs_0455  469478 ..  469499 +  -4.3  -3.65046   CCCTTCGTCATAAGC           CGCCTGC GCGGCGAA GCTGGCG            TTGTTGGCATCGCGC  55 284
    Ajs_0457  471499 ..  471510 +  -7.2  -2.87931   CGCGATCTGGCGTAT                GCCG CCGT CGGC                 TGTGTAGAGCGTGGA  50 329
    Ajs_0460 NONE
    Ajs_0461  474494 ..  474523 +  -2.7  -4.08767   CAGATCCGCGGTAGG       GCATGTGCAGCAT GTAG GTGCCGGTCATGC        TTTTGAACAGCTCGC  59 497
    Ajs_0471 NONE
    Ajs_0472  487899 ..  487927 +  -6.6  -3.04144   TTGAGTGTGTCGATA        CCTCGGACCGGC CAGGC GTTGGTTCGTGG        TATTCCCGCTGCCCC  51 110
    Ajs_0473 NONE
    Ajs_0474  489948 ..  489966 + -10.3   -5.1675   TGAAATGCAGAAAAG             GAGAGCG CAAGC CGCTCTC             TTTTTTGATGGCTGC 100 100
    Ajs_0475  492232 ..  492256 + -13.6  -5.40072   TACAGACCGACCACA         CCCGGTCCTGC GCAA GCAGG-CCGGG          TTTTTTTGCGCCACG 100 85
    Ajs_0476 NONE
    Ajs_0477  494234 ..  494266 +  -3.9  -4.04318   CCCGTGCAAACCGGA      GCCCCTGCGCGCCGA CCC TCCGTGCTCACGCGC      TTTGTCCTGTATGCC  61 75
    Ajs_0478  495015 ..  495029 +  -4.2  -2.80816   GATCGCTCCAGCGCC               GCGC CAGCCAC GCGC               TGTAGTGGATCAGGC  43 160
    Ajs_0497  519030 ..  519051 +  -2.9  -4.07526   GCTTTGCGCAGGGTG           AC-CGGAGCC ACC GGCTCTGAGG           TTTCTATAGATGGTT  58 6
    Ajs_0499 NONE
    Ajs_0500  521161 ..  521176 +  -8.2  -3.01712   CGACAGCACCAGCAC              GCCCGG GTCC TCGGGC               TCTTGCGCCACCACG  55 368
    Ajs_0504  525899 ..  525935 +  -9.9  -3.07043   CGCTCCAGCAGGCGC    ACCAGCGCGGCAGCGCC CAG GTCGCCGCTGCGGTGGA    TGTTGCCGTGCTCGC  60 483
    Ajs_0509  531383 ..  531415 +  -3.4  -3.43042   GCTATATAAAAAGGA      GCTTTTAGCGCTTG CTGGA TAAGCGCTGGAGCC      ATTTTTCATGCCACA  49 63
    Ajs_0517  540415 ..  540459 +  -9.3  -3.18264   GCTTCAGGCCGGGAG CGGCTCGCGCGCATCGGCCGCG AACT CG-GGCTGGC-CGCGC-AGCCG TTCGTAGATCGGCGC  61 56
    Ajs_0521  544227 ..  544263 +  -4.3  -4.75174   GAAGTCCTGTATTGA    TAGCTGCTTGCGCTTAC TGG GTAAGGGCTAGAGGCCA    TTTTTCCCTTGGATC  75 76
    Ajs_0522  545098 ..  545131 + -11.5  -2.90392   TAGGCAGGCGCGCCC     CCGGCGTGCCCCGCG GGTG CGCGGGGCGATCCGC      TATCCTTGGGGGCTG  64 38
    Ajs_0523 NONE
         lnt  547747 ..  547775 +  -7.9  -5.47218   TAATAGAGGGCCTTC        GCCGCCCGTGGCC GCG GGCCGCGCGCTGA        TTTTTTTGCATCAAC 100 117
    Ajs_0525 NONE
    Ajs_0526  549601 ..  549618 + -14.1   -4.4078   TCGGGCCAGGTACGA             CGGGGGC TGCG GCCCCCG              TTTTGCTTGGACGCC 100 46
        glyQ NONE
    Ajs_0528  552885 ..  552902 +  -6.9  -3.78775   TGACGGCGGACGCGG             GCGGCGC GGCA GCGTTGC              TTTGATAATCGCGCC  62 77
    Ajs_0529 NONE
    Ajs_0530 NONE
    Ajs_0531 NONE
    Ajs_0532  555755 ..  555791 + -18.8  -4.28432   TTGCTCTCAAAAAAA    TAGCTGCCAGCGCTTG ATGGG CAAGCGCTGGCAGCCG    TTTTGGCTTGAGATT 100 59
    Ajs_0534  557219 ..  557255 +  -9.9  -3.02144   GCGGCGCGCCGGTTT    GCCGAGCTGCCGGCCTG ACA CGGCCCGCCAGCGCGGG    TGTTAAGCGGCCTAG  62 8
    Ajs_0537  559731 ..  559745 +  -4.2  -2.70932   AAGCAGTACGAGGCC               GCATGA ACA TCCTGC               TCCTTGGCAAGAACG  42 20
    Ajs_0538 NONE
    Ajs_0539 NONE
    Ajs_0540 NONE
    Ajs_0541 NONE
    Ajs_0542  566096 ..  566106 +  -2.4  -3.02144   CTCATTCACCCAAAC                 CACG GCC CGCG                 TGTTGGCGCGACTGG  41 70
    Ajs_0543 NONE
    Ajs_0544 NONE
    Ajs_0545 NONE
    Ajs_0546 NONE
    Ajs_0547  572902 ..  572916 +  -2.8  -3.44146   ACTATTTTGACCGGT               GTTGGT CGA ATCAGC               TTCCTTATAGGAGAC  49 65
    Ajs_0548 NONE
    Ajs_0549 NONE
    Ajs_0550 NONE
    Ajs_0551  576890 ..  576908 +   -11  -3.24747   TGTTTCATGCCTGTA             GTGCTTGC CAG GCAAGCGC             TTGATGCTATGAAAA  67 83
    Ajs_0552 NONE
    Ajs_0553 NONE
    Ajs_0554  582174 ..  582190 +  -7.9  -2.62616   CCGCCCAGGGATTGA              CGGGCGC CGA GTGCCTG              TAATATCGCGCCTCG  51 26
    Ajs_0555 NONE
    Ajs_0556 NONE
    Ajs_0557  585330 ..  585362 +  -3.3  -5.07107   ATAGAATCATACGGG      TCGACGGGCGGGG AAGCCCC CCTCTTCGGTCGA      TTTTTTCAACGTTTG  78 248
    Ajs_0558  591128 ..  591149 +  -6.5  -5.80364   AAAGCTTGAAAGAAA           CCCTGTCTC CTAG GAGGTGGGG            TTTTTTTATTGCAGT 100 118
    Ajs_0559 NONE
    Ajs_0560 NONE
    Ajs_0561 NONE
    Ajs_0562  594687 ..  594713 +  -2.1  -2.57132   CAGACCAGAACGCGT         GGCTTGAAGCC AAATA GGCCTCCAGCG         CTTATGCAGCAAGCG  38 19
    Ajs_0563  595297 ..  595330 +  -8.7  -3.21595   CCAGGACGGCTTGGC     CCGGCATGCGCCG CTGGTGTT CGGCGCGCGCCAG      TTGCTGCAGTTTCTT  58 111
    Ajs_0566  598427 ..  598444 +  -9.9  -2.87132   GCCGTAAAGCCTCGC             GCCTTCA CCGC TGAAGGC              TGTCTGAGCAAAGCG  59 501
    Ajs_0569  599356 ..  599405 +  -4.5  -3.50853   CTCTCTACACCCACT GGCCTCGATCTGAACTT-CTCGTC CTGGA GGTGAGTGAGTT-GG-TCGAGGCC TTGTCGTTGGCGCGG  51 77
    Ajs_0570 NONE
    Ajs_0571  600331 ..  600349 +    -8  -3.21199   CGGTGCTGTGATGTT             GGTCGCCC CTG GGGCGGCG             TTCAATTCGTGGATA  56 30
    Ajs_0572  602261 ..  602276 +    -9  -3.14344   ATGCATCACGTCGTA              CAGCTC AAAC GAGCTG               TTGATGAGCAAGCTG  61 365
    Ajs_0574  604416 ..  604454 + -11.6  -3.03007   TCACTTTGAGCAATT   GGACTGGTGCAGCGCTTG CCG CAGGCGCTGCGCGAGGGC   TATTGCCCCGATATT  68 131
    Ajs_0576  606771 ..  606794 +   -11  -2.75528   TGGGCCGTTGCAATC          GCTGCGCAGA CGCG TCTGGGCAGC           TCGTGTCTTCGCACT  63 94
    Ajs_0578  608893 ..  608905 +  -3.3  -4.41616   GCGCCCGTCAGGCAA                GCGCT GGC AGCTC                TTTATTTGAGAGCGT  67 58
    Ajs_0581 NONE
    Ajs_0582 NONE
    Ajs_0583 NONE
    Ajs_0584 NONE
    Ajs_0585  617679 ..  617693 +    -7  -2.70932   GCCCCCTGAGGTGGG               CGGCCG GGG CGGCGG               TGATTGAAGGGCGGG  49 32
    Ajs_0586  618783 ..  618800 +    -4   -4.2528   GTATTTCGAGGCCCT             GGGGGC ATGAGC GCACCC              TTTATTGCATTGAGA  66 16
    Ajs_0587  619963 ..  619995 +  -3.3   -3.6944   GCGTTTCTGAGCGCC     GCGCGTGGTG-GCC AGTTGC GGCACAATTCGCGC      TCTTTGTGTTCCACC  54 31
    Ajs_0588  620957 ..  620992 + -15.6  -5.40072   GTATTGGAGTCAAAA    TGGCTGC-AGCGCTTGT CCA GCAAGCGCTAGCAGCTA    TTTTTTTGGAAGCGG 100 65
        slmA  622224 ..  622234 +  -5.4  -3.89695   GGTCTATCAGCGCGT                 CAAC GGG GTTG                 TTCTCTTTGTCCAGC  63 495
    Ajs_0591 NONE
    Ajs_0592 NONE
    Ajs_0593 NONE
    Ajs_0594 NONE
    Ajs_0595  629932 ..  629948 +  -2.2  -3.14132   GATTGCAGCCAAGCC              GGCG CAGACCGGC CGCC              TTCATGGAGACAAGC  43 73
    Ajs_0596 NONE
    Ajs_0597 NONE
    Ajs_0598  632564 ..  632577 +  -8.1  -3.04144   GGGGCAGGGCGACGC               CGGCA TCCA TGCCG                TGTTCGCCCTACGCG  57 66
    Ajs_0599  633294 ..  633316 +  -5.5  -4.39166   CGAACGGTTTGGTTA           CCGTTCTTG CGTAA CAGGGGCGG           TTTTGATCTGTGGCA  74 134
    Ajs_0600  633952 ..  633974 + -11.3  -5.40072   ACCCATCGCCGCCAG          CGGGAG-GCC GTGA GGCGCTCCCG           TTTTTTTACGGCGCG 100 50
    Ajs_0602  636259 ..  636290 +  -5.2  -3.05844   TGATGGTCAAAACGG      GCTG-TAGCGCTT ATGTGGC AAGCGCAAGCAGC      TATTAAAATGAAAGC  47 19
    Ajs_0603  636648 ..  636690 + -22.2  -2.84051   GATGCGTGAGGCGTA AAAAAGCGGCTAGCGCCC GTGGTTA GGGCGCTAGCCGCTTTTG ATTTGATAGCGCTGG 100 39
    Ajs_0607  640881 ..  640893 +  -3.4  -3.08679   CGCGGGCGCACCACA                CTTG GCATG CAAG                TCTTGCATGCGAACC  43 41
    Ajs_0608  641977 ..  641990 +  -3.8  -2.56596   ACGCGCCGCAGGGTG               TGGC TTGACC GCCA                TCGGTTCCTCAGAAC  41 65
    Ajs_0609  642976 ..  643006 + -19.1  -5.64873   CGGCTTGCATTGCAT      CGCCCCTTC-GGCC TCTG GGCCCGAAGGGGCG       TTTTTTGTTGTTGCG 100 42
    Ajs_0610 NONE
    Ajs_0611 NONE
    Ajs_0612  645450 ..  645476 +   -21  -5.13722   CAAAAGGGCAAAAGG         GCAAAAGGCGCC AAT GGCGCCTTTTGC         TTTTATTTTGATAGC 100 210
    Ajs_0614  647140 ..  647161 + -12.9  -3.37344   GTACAAGCTGTGATC           GCCCCGCCC GAGC GGGCGGTGC            TTCATTGCATCGACG  74 28
    Ajs_0618  652215 ..  652237 +  -4.6  -3.57406   GCTATCGATATGAGA           GGACAGCGCG ATG CGCGCGGACG           TATTTCTGGTGGAAG  55 128
    Ajs_0619 NONE
    Ajs_0620  654066 ..  654101 +  -4.6  -3.24925   GGGCTCTGAAGCGGC    GGGGATGGGTAATATC GGCA GCTTTTTCCCGTCCTC     TTCCTCCTATCCCCT  48 32
    Ajs_0621  654803 ..  654849 + -14.2  -2.78816   GCCGGCGTGCTGTTG GCGGCCGTGCTGGCGGGTTGCG CGG CGCCACCCGCCGATGCGCCCCC TGTGGTAGCACCTGG  75 75
    Ajs_0622  655688 ..  655707 +  -4.8  -3.82097   CGGCGCGCGCCTTCA            CCGGCCGC AGGG GAGGCCAG             TTTGCTGGATTTCAC  58 224
    Ajs_0624  658529 ..  658572 +  -3.7  -3.39216   TTACTCGCAGTAGGG CACTGCGCAGCGGTCGATT TTGTAT AATGGCCGGCTTCGCAGCG ATTTTTAGGTCCCGC  48 28
        rplM NONE
        rpsI  659573 ..  659588 + -11.8  -6.20267   TGCAGACTGCAGAAA              CCGCCC TTCG GGGCGG               TTTTTTTGTTTTTGG 100 87
    Ajs_0628 NONE
    Ajs_0629  661277 ..  661292 + -11.8  -5.28176   AGCCCATGAGAATCC              GCCGCC TACG GGCGGC               TTTTTTATGGCTGCG 100 46
    Ajs_0632  665281 ..  665298 + -11.3  -5.16237   CTCCCGCTTTGCCAA             GCCACTG CGCG CAGTGGC              TTTTTTCATGCCCTT 100 63
    Ajs_0635  667614 ..  667650 + -24.6  -5.40072   GCTATCGCATCAAAC    TGGCTGCTAGCGCCCG CCATT CGGGCGCTAGCAGCTA    TTTTTTTAGGAGCGA 100 48
    Ajs_0636 NONE
    Ajs_0637  670352 ..  670375 +  -6.6  -3.05715   CATGATCAACAAATG          GGGGCGTGGG CATG CTCAGGCTCC           TTGCGTAGAGGGCTT  49 389
    Ajs_0641  674137 ..  674167 + -13.2  -4.51197   TCGGGGCAGAGGATC       GCCCCGGGTCGG GCGCGAA CCGGCACGGGGC       TTTTGGTTCGTTCTC 100 136
    Ajs_0643  676230 ..  676244 +  -4.2  -4.40237   GCGTCTGGCCAAGGA               CATCAC GTT GTGCTG               TTTTCATGTCTGCTC  69 421
    Ajs_0645  678120 ..  678137 +  -4.1  -4.26903   CCGTCCGGCGCGATA             GACGAGGT ATT GCC-CGTC             TTTTGCTGCGCTGGC  66 395
    Ajs_0647 NONE
    Ajs_0648 NONE
    Ajs_0649 NONE
    Ajs_0650  684596 ..  684620 +  -7.8  -3.57792   TCAGCGGCCCGGCAG         GTGCC-GCCTC AGGC GGGGCTGGCGC          TTTGCAGGTGGCTGG  62 70
    Ajs_0653  687584 ..  687602 +  -4.4  -3.53811   GGCGCGGACATTGCG             CCGCCCCT ACC ATGGGCGC             TTTGCCCCGGCTGGA  53 54
    Ajs_0654  688364 ..  688409 + -13.4  -4.07568   TGAAACCTGTCAGCG CAGCGGGATCGGC-GTGCCC CGGTCCAC GGGCACGGCCG-TCACGCTG TTTTGCGGCGAGCCG  90 100
    Ajs_0658 NONE
    Ajs_0659  696832 ..  696844 +  -4.7  -3.95787   GGCGCTTGCCTGGTG                CGGCC TGT GCCCG                TTTGTCCCTGTCATA  60 46
    Ajs_0660  697559 ..  697587 + -11.7  -2.77899   GCTCTCAGCGCGCCG       CCGCGC-GGGCG CGGTCC CGCTCGGCGCGG        TACTTGATGGCGAAG  66 137
    Ajs_0665  702019 ..  702037 +  -4.4  -4.56597   AAAACCCAGTCTTGG             CAAGCGCG CCG CGCTCCTG             TTTTTGAAAGGCGCC  72 106
    Ajs_0676  712471 ..  712486 +  -3.2  -2.78679   TAACCGCGCGCCGGT              GCTG-CC TGC GGTCGGC              CTTTCAGTGGCAGAA  40 98
    Ajs_0680  716374 ..  716404 +  -8.9  -3.72324   GCGGTAGAGGAAGGG      CGCC-CGCCGCCTG CGCC TGGGCCGCGTGGCG       TTCTTCATCCCGCTG  65 122
    Ajs_0682  718353 ..  718372 +   -15  -5.72207   ATAAAGAAGACAAAA            CCGCTGCC TTCG GGCAGCGG             TTTTTTTAGTTTGCA 100 68
    Ajs_0683  719710 ..  719729 + -11.4  -5.90981   TCAGCGAAACCAAAG            CCGCTGTC TTCG GGCAGCGG             TTTTTTTTCGTCTGC 100 68
    Ajs_0685 NONE
    Ajs_0686 NONE
    Ajs_0687 NONE
    Ajs_0688 NONE
    Ajs_0689  728048 ..  728087 +  -9.8  -4.07568   CAGCCCTCGCTGCGG  CGCGGCGCGGCCGGCCCGG ACC CCTGCTCGGCTGC-CCTCG  TTTTGGGGGGCGCCC  78 115
    Ajs_0690 NONE
    Ajs_0691  730226 ..  730264 +  -4.5  -3.54129   TTATGTGAGCAAAGA  G-GCTGCGCGCGC-CCTGT TCT ACGGGCGCGCGTGTGGGGC  TTTCACGGCGCTGTC  53 96
    Ajs_0692 NONE
    Ajs_0693  732905 ..  732919 +  -2.8  -4.98255   TCAAAGCAGGGCAGG               CGGTAG CAG CTATTG               TTTTTGTGCTTCGCC  78 111
    Ajs_0696  736531 ..  736544 +  -2.4  -2.75081   AGCTGGAACAACTGA               TGCA AGCCGC TGCA                TGAATTTTGACGATC  39 9
         pgi  738360 ..  738391 + -11.5  -2.52464   ATGTGCAGCGCCAGG      CCGGCGGACATGC TCAGGC GCAGGTCCGGCGG       TGCGTTGGGCACGGG  61 225
    Ajs_0706 NONE
    Ajs_0707  747935 ..  747949 +  -2.8  -3.14132   GGTAAGCGCTAGCAG               CTACGA AAA TCATAG               TTCCTGGCGAAGAAG  44 62
    Ajs_0710  750438 ..  750466 + -13.2   -4.4648   ATCGCACCCAAGACG       GGCGGGCTCATCT GAAC GGATG-GCCCGCC        TTTTCTCATGGGCCT 100 96
    Ajs_0711 NONE
    Ajs_0712  754044 ..  754062 +  -4.4  -3.00022   GTCCAAGGGGGGAAC             CTGCGGGC CCT GCGGGCAG             TCTGTGTCCCATGCA  45 49
    Ajs_0713 NONE
    Ajs_0714  755785 ..  755821 +  -4.3  -4.84017   TTGCTATTATTTGGA    TAGCTGCTAGCGCTTTC TGG GTAAGCGCTAGAGCCGA    TTTTTATCAAACCTT  77 41
    Ajs_0722  762381 ..  762401 +  -9.7  -2.91695   CAACGGTCAGAGCAT            CGGTGGACA GGT TGTCCAACG            TGGTTTGCACCTCAG  58 86
    Ajs_0727 NONE
    Ajs_0728  766541 ..  766558 +  -9.8  -2.57354   TGCGCAAATGATTGC             GCGGGC GCACAG GCCCGC              CTCTTCATTAATTAC  59 76
    Ajs_0730  770262 ..  770283 +  -3.7   -2.8789   CCTCCTGTGGGCTGG           CAATGC-GGA GGT TCCTGCAGTG           ATTCTTATCAACCTT  44 3
    Ajs_0731 NONE
    Ajs_0732 NONE
    Ajs_0733 NONE
    Ajs_0734  774226 ..  774246 + -16.9  -5.10461   GTTCAGTTGGTTCGA            CAGGGGGTG GTT CACCCCCTG            TTTTTATTGGGTAGA 100 48
        aroB NONE
    Ajs_0736 NONE
    Ajs_0737  777292 ..  777344 + -16.1  -3.59979   TTGGCGTGTTGTTAA ATGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACCG TTTCCGATCAGAAGG  91 72
    Ajs_0740  780644 ..  780657 +  -3.8  -3.19192   TTGCGTGGCCATGTT               GCGT TGCACT ACGC                TTGCGTTCCCTGCGA  47 159
    Ajs_0741 NONE
        gltD  787035 ..  787070 + -15.4   -5.1675   CTGCTTACCCGTCGA    CCGGCACAACGGCGCC CTGG GGCGCCGTTGTGCTTA     TTTTTTGATAGCTGC 100 93
    Ajs_0743  788198 ..  788216 +  -6.6   -3.5774   CTTGCGCGGCGTCCG             CTGGCCTG GGG CGCGCCAG             TTTCGACGGTTGCGT  59 138
    Ajs_0744 NONE
    Ajs_0745  789699 ..  789730 +  -7.4  -3.12521   CTAGCGCCGAATTGG      GC-TCTAGCGGTTAT GGG ATAAGCGCTGGAAGC      TATGCTTTTGGTAGC  56 45
    Ajs_0748 NONE
    Ajs_0749 NONE
    Ajs_0750 NONE
    Ajs_0751 NONE
    Ajs_0752 NONE
    Ajs_0753  795660 ..  795673 +  -9.5  -3.05384   CGGCCTGCGGGGCTG               CCCGC ACCT GCGGG                TTGCCTGCCGGCCAA  60 44
    Ajs_0754  796964 ..  796987 +   -11  -2.75528   TGGGCCGTTGCAATC          GCTGCGCAGA CGCG TCTGGGCAGC           TCGTGTCTTCGCACT  63 94
    Ajs_0755 NONE
    Ajs_0756 NONE
    Ajs_0757  799092 ..  799124 +  -2.8  -3.72481   ATGGGCGCATACACC     GTCGCGCGGCATTC CCCCAAA GAA-GTCGCGC-AC     TATTCTTTTAATAGC  54 134
    Ajs_0758 NONE
        hisG  801285 ..  801308 +  -5.2   -4.5123   GTGGCCGGGCACCCC          TCGGC-TTCCG CAA CGGCGCGCCGA          TTTCTTTCGTACATT  71 136
        hisD  802687 ..  802704 + -11.3  -4.45168   CTGTACGCCTACCAA             GCCACCT TGCG AGGTGGC              TTTGTCTTTTCAAAA  95 54
    Ajs_0761 NONE
    Ajs_0762 NONE
        hisB NONE
        hisH  806026 ..  806042 +  -9.3  -2.58544   AGCCCTGATTCTTCA              ACCCGGC AGG GCCGGGC              CTTGTGCGGCTCGCC  56 33
    Ajs_0765  806841 ..  806851 +  -8.2   -3.7282   CTCAGCAGCCGGGCA                 GGGC GCG GCCC                 TTGTTGATGGCGTCC  69 46
    Ajs_0774  821828 ..  821839 +  -7.2   -2.7535   CGCGCACGCTGCAGC                CGGC GTGA GCCG                 TGGTATCTTGCGCGC  52 18
    Ajs_0775 NONE
        hisI NONE
        hisE NONE
    Ajs_0778 NONE
    Ajs_0779 NONE
    Ajs_0780 NONE
        tatA  825734 ..  825758 +  -2.7  -3.23216   AGCACAAGAGCTGAA          CGCCCACGC CTTTCCT GCCTGAGCG          TTCCTCATGATCGAC  43 27
        tatB NONE
    Ajs_0783  827173 ..  827209 + -21.1  -5.52384   GAGCGGAAACAAAAA    TAGCTTCCCGCGCTT TGTAGAT AAGCGCGGGAAGCTA    TTTTTTTAATAGCAA 100 103
    Ajs_0786  830776 ..  830808 +  -3.3  -2.71329   GCTATTGAAAGTATA      GCTGCTTGCGCTTTA TGG TAGAGCGCTAGGGCC      CTATTTGATCTATAG  40 47
    Ajs_0787  831908 ..  831937 +   -20  -4.57073   TCCCTGAAATGCAAA       GGCCCGCCGCCC CAGGAA GGGCGGTGGGCC        TTTTTACGCGCCCTC 100 46
    Ajs_0789 NONE
    Ajs_0790 NONE
    Ajs_0791  835381 ..  835404 + -16.8  -4.77757   TGCCGAGCATGTACA          GAGTGGGTGC CCTG GCACCCACTC           TTTTGATTTTTAGGA 100 72
    Ajs_0792  836032 ..  836051 +  -2.1  -3.90163   TTCCGAGAAAGTCAT            GCGCA AATAAGCTGC TGCGC             CTTTTTCTTTTGCTT  54 16
    Ajs_0793  836746 ..  836771 + -15.5  -5.10933   GGCACCATTGCACAG         GCCGCATGTTC GCAG GGACATGCGGC          TTTTCTTTTGCGTGC 100 170
    Ajs_0795  838236 ..  838272 +  -7.2  -3.05844   TCATCACAGGGATTC   CGGTCGCTCTGC-CGCT CGTT GGCGTGTAGTGCGGTCG    TGTTCGCATGGCCAC  54 117
    Ajs_0796  841072 ..  841088 +  -2.2  -4.58303   GCTGCGGCCCGTGTT              CGCACT TTGGC AGTGCC              TTTTCTCCTGTTTCC  68 64
        argJ  842346 ..  842357 +  -7.2  -3.12595   TACGTGACCATCAAC                GCGG ATTA CCGC                 TCTTGAATGCTTCCC  56 8
    Ajs_0798 NONE
    Ajs_0799  843760 ..  843794 + -10.7  -4.66987   TGCTTCAAAATACAT     AGCTGCTTGCGCTTG CTGGA TAAGCGCTAGCAGCC     TTTTCTTCAAATATC  95 46
    Ajs_0807  852244 ..  852268 +  -3.5  -3.45134   CCCTGATTGCGTGCT          GGGGCGG GGTTCGTTAGA TCGCCCC          TTGTCGGTTCGTTAG  49 124
    Ajs_0816  861667 ..  861696 +  -5.6  -3.41878   GTGGGTGCAGGCGGC       CGGTCTGCCATG GGTGGG CACCGCAGGCCG        TTGTGCATTGCAGCC  53 487
    Ajs_0820  863843 ..  863873 +  -7.5  -2.71364   GCGTAGGCGATGAGT       TCTCCGCCATCCC AGAGG GGGACGGTGTAGA       TCGTTCGCCCCATGC  51 72
    Ajs_0822 NONE
    Ajs_0823 NONE
    Ajs_0824  866003 ..  866041 +   -17   -5.0538   ATCTGACCCAGCGGC   CCCATTCTTTGTGCTG CATGCCA TAGCACAAAGAATGGG   TTTTTTGCACTGGGG 100 0
    Ajs_0837  885080 ..  885091 +  -5.8  -4.67904   CATGGCATCCAGGAT                CGCT CGGC AGCG                 TTTTTCCAATTCCTG  80 209
        rplU NONE
        rpmA  888875 ..  888906 + -21.8  -4.08767   TCGCCGCTGAAGCGA      CAACAAAGCCCCGA CCCG TCGGGGCTTTGTTG       TTTTCAGCGCCTGGC 100 48
        obgE  890075 ..  890085 +  -3.2  -3.66401   CACCGCGTGGGTGAT                 GCGA GGA TTGC                 TATTTAATTTATAGC  51 27
    Ajs_0844  891366 ..  891402 +  -8.7  -4.11216   CTTCTTGGGGACGGG   CAGGGTAGGCAGCGCC TCCAAC GGCGCTGGC-ACGCTG    TTTTGCGGGTCAGGG  72 102
    Ajs_0846 NONE
    Ajs_0847  894592 ..  894604 +  -9.1  -2.57132   ATGGCCACACACGCC                GGCAG GTG CTGCC                CTTGTCAGCAGCGCC  56 79
    Ajs_0853  900263 ..  900281 +  -9.5  -2.70932   CAGCCAGTGGCTGCT             GCTGCGC GCCTG GCGCGGC             TGATTCAACCCCCGC  57 4
    Ajs_0855  902267 ..  902301 +  -2.8  -3.55622   ACACGGCCGTGGCCA    AGCGCGCCAACA-TC AAGCTG GACTGATGGTGCGCC     TTTGACAGCGTTGCA  51 0
    Ajs_0856  903606 ..  903624 + -10.2  -2.73875   CGCAGCAGCACCCGG             CCCTGGGC GCT GCCCAGCG             TCATGTTGCGCACGG  57 435
    Ajs_0863  912444 ..  912458 +  -2.1  -3.72481   CATCCGCAGCCGCGT               GCTGT ATTAA ATAGC               TATTGTTTTAATAGC  52 16
    Ajs_0864  916547 ..  916561 +  -3.5  -2.62184   GCGCCAACGCCGGCG               GCATC GAGCG GGTGC               TGGTATGAGCCAGGC  39 3
    Ajs_0865  917155 ..  917197 +  -3.3   -4.4078   GCGGCGGACAATAGC GGCA-GGGCGGCGGTGCGCGG TCT CCGC-CGCCGGTGTTCATTCC TTTTCATTGCGCAGG  67 123
    Ajs_0866  917635 ..  917677 + -14.7  -2.76492   GGCTGCGGCGGGCAT TGAGGCGCAGCACGGCC-CG CCCG CGTGGCCGCGCCGCGCCACG CTTTAGCCTAAATAG  75 23
    Ajs_0867 NONE
    Ajs_0868  919613 ..  919636 +  -8.8  -5.33405   GTTCGGGGAATAATC          GGGGACTATG GCAA CACGGTCCCC           TTTTTCTTTCCTGGA 100 99
    Ajs_0869 NONE
        ubiB  921741 ..  921752 +  -5.8  -3.29216   TCATGCAGCTCTTCG                TGCG CGTG CGCA                 TCTTCTAACTTCCTT  52 6
    Ajs_0871  923266 ..  923282 +  -3.6  -2.91467   ACGGGCGCACGGTGC              GGCCTG GGGTG CATGCC              TATAATTGAAGGTTT  42 44
    Ajs_0872 NONE
    Ajs_0873 NONE
        aspS  926165 ..  926190 + -18.3  -5.28942   GCTCCGACACCTAAG         CGGCAGGCGCG TTCA CGTGCCTGCCG          TTTTTGTTTGCCATA 100 52
    Ajs_0875 NONE
    Ajs_0876 NONE
    Ajs_0877 NONE
    Ajs_0878  929636 ..  929647 +  -4.4  -3.01712   GGCATTCGCTGGTAC                CATG CCGC CATG                 TCTTCAGAACCCCCA  45 144
    Ajs_0879  930367 ..  930384 +  -2.6  -3.33525   CATTCCCCGAAGGAG             CTGACC CATGCT GGTCCG              TCTTCTCTACGTCAG  45 22
    Ajs_0880  930973 ..  931013 +  -5.2   -3.2794   CGCCGACCACCTCCT GAACGCCGCAGCCGGCCGCG AGG CGCTGC-GGCGGCGG-GCCC TTCATGTCGCTCAAC  50 202
    Ajs_0881  931919 ..  931938 +  -6.3  -4.09739   TGCCTTGGCGTTGTC            ACGCGCC TAGATT GGCGCGG             TTTTCACGCCCTTCG  67 16
    Ajs_0882  933026 ..  933036 +  -8.2   -3.5393   GATGCGTGCGGGAGG                 CGGG GAG CCCG                 TTTCCGCCAGGTGAT  62 243
    Ajs_0885  934972 ..  935008 +  -9.4  -4.32482   ATACTTCACTTTTTA    TAGCTGCTAGCGCTTG TCTAT CAAGCGCTGGAGGCCA    TTTTGGCTTGTGCCT  83 40
    Ajs_0892  942453 ..  942489 +  -5.8  -3.61398   GAGCGAATGCAGGAT   G-CTGTCCTCGATCAGC GTGC GCTGGTCGGGCGCGGGC    TTCTTGAGCACCCAG  54 236
    Ajs_0899  948986 ..  949042 +  -7.8  -3.07522   CACCTATTTCTGTCC GCACTGCCAGCGCGCCTGACCGGGCTGC GTG GCGGC--GGACCGGCGCAATGGCGATGC TATATTGCGCCATCT  54 7
    Ajs_0900 NONE
    Ajs_0901  952278 ..  952295 +  -4.7  -3.01791   AGATGCCGTCGAGCT             CGCGGTG GCGG CGCAGCG              TATTCCAGCGGCCCT  47 153
        hrcA  956898 ..  956915 +  -9.1  -3.14132   AAGCACTTACAGCGG             TCTGGCG ATTT CGCCGGA              TTGCTACCGAGGAAG  61 199
    Ajs_0906 NONE
    Ajs_0907  959269 ..  959281 +  -6.9  -2.83903   GGTCGAGCTATATAC                CGGGG ACG TCCCG                TCAGTTTTTGAGCGG  50 75
    Ajs_0908  960681 ..  960697 +  -7.9  -3.40403   GTTGGGTGCGATCCA              GAGCCTG GAT CTGGCTC              TTCTCGTCCACGCAC  60 456
    Ajs_0910  961873 ..  961891 + -10.2  -3.07113   GGAAGGCCTGCCACT             GACGCAGC TTT GCGGCGTC             TTCGCTGAACTGCTG  60 196
    Ajs_0914  965625 ..  965652 +   -12  -2.62263   TTGCCACCGATGATG        GCAATGCCTACC TGGC GGCAGGCGTTGC         TGGTCTGGGGGCGCT  65 486
    Ajs_0916  966699 ..  966731 + -17.1  -5.08824   ACCAGTCCCCAATAG      CACACCCCGCTATCG CGT TGATAGCGGGGTTTG      TTTTTTCACTGCCGA 100 195
    Ajs_0917 NONE
    Ajs_0918 NONE
    Ajs_0919  968632 ..  968648 +  -5.1  -4.56597   CCCGTGCACCGCGGC              TGCGGTA TGG TGCTGCA              TTTTTCGGAGCAGGA  74 78
    Ajs_0920  969025 ..  969070 + -19.7  -2.90496   GCCGCAAGAGTGTGG CGCCGACGAAGCATGCGTGGC TGTG GCCGGGCGCGCTTCGTCGGTG TGCTTTCGGCGCCCG  93 44
    Ajs_0926  974855 ..  974871 + -10.8  -5.40004   CCATCACCCTGTAAA              GCCCCG AAATA CGGGGC              TTTTTTCATTTCATG 100 77
    Ajs_0927 NONE
    Ajs_0928  977000 ..  977011 +  -5.8  -3.69902   GTACAACGGGATTTC                GGCT CTAT AGCC                 TTTGCCATGTTTCAT  60 44
    Ajs_0929  977352 ..  977363 +  -7.2  -3.53224   AAGCTCGCCGGCGAA                CGCC AGCA GGCG                 TTTACCACGGCGATG  60 91
    Ajs_0930 NONE
    Ajs_0931  979793 ..  979803 +  -2.4   -2.8552   GCACCTGCACGCGAA                 ACCC GGA GGGG                 ATTTGGTGACTGACC  40 2
    Ajs_0932 NONE
    Ajs_0933  981805 ..  981821 +  -5.7  -3.31144   AGGTGCGAGGCCCTG              GCGCGGG AAA TCGGCGC              TTATCGCCCTGCGGC  52 82
    Ajs_0935  982381 ..  982391 +  -2.4  -3.53091   TGCCGTGCAGACAAT                 GCCG TAT CGAC                 TTTGGAGAAACCCAT  47 78
    Ajs_0936  983348 ..  983358 +  -4.6  -3.03124   TGAAGGCCGCCGAAA                 CGCT GCT GGCG                 TATTCGACCGTGCCG  47 303
    Ajs_0937 NONE
    Ajs_0938  985186 ..  985204 +  -4.4  -2.71416   TCAGCAACCGGGCAA             GCCGGACA CCA TGACCCGC             GTTCTCTACATGCTG  42 67
    Ajs_0939  986095 ..  986106 +  -7.2  -3.18264   CCTCGGAACTGCACG                GCCG TGGG CGGC                 TTGCTCCGTGCCCGG  56 180
    Ajs_0943 NONE
    Ajs_0944  988223 ..  988248 +  -2.5  -3.18274   GCTGATTGCCGGGTA         TGGTTCGCCTT GAAT AAGGTAATCCA          TTGGATTAGAATAGG  43 13
    Ajs_0945 NONE
    Ajs_0946  988958 ..  988968 +  -6.8  -3.67775   CTGAAAGATCGCATT                 GGCT CAG AGCC                 TTGTTCCATGCGGGT  59 83
         gmk NONE
    Ajs_0948  989934 ..  989950 + -13.7  -5.81412   GATCCCGGTAAAAGA              GCACCGC GTG GCGGTGC              TTTTTTTTGCCTGCG 100 60
    Ajs_0949  992581 ..  992607 +  -3.5  -5.44119   GTTTCGTCAGGAAAC         GGATGCGCCTG TCGAT CTCGCGCAGCC         TTTTTTTGCCGTACA  90 341
        rpsO  993949 ..  993978 + -12.2  -5.26875   GCCGGCATGCCGAGA       CGCCTGGGTTAG CTCTGT CTAGCTCAGGCG        TTTTTTACTTCGGAG 100 45
    Ajs_0953  996335 ..  996354 +   -10  -3.55084   CAGCAGTAAGCCGGG            GGTGTTCC TTCG GGAACGCC             TGTTTGCTATTGAAA  70 32
    Ajs_0954 NONE
        tpiA  998164 ..  998195 +  -6.6  -3.15056   TTCTTGAAAATTATC      GCT-GCAGCGCAT AGCTGAC AAGCGCTGCTAGC      TATTAAATTAGGAGT  53 8
    Ajs_0956  998825 ..  998862 + -12.6  -4.58395   ACCAATCACAAGAAG   CCGCCTCCCTGGTCCC CGTTGC GGGACATGCGAGGCGG    TTTTTCAGCGGTGAG 100 250
    Ajs_0957 NONE
    Ajs_0958 NONE
    Ajs_0959 1000374 .. 1000385 +  -7.2  -3.21218   GAGGCCTGCACTGAG                GCGG CATG CCGC                 TTGGTGATCGACCAT  56 27
    Ajs_0960 NONE
    Ajs_0961 NONE
    Ajs_0962 NONE
    Ajs_0963 NONE
    Ajs_0964 NONE
    Ajs_0965 NONE
    Ajs_0966 NONE
    Ajs_0967 NONE
    Ajs_0968 NONE
    Ajs_0969 NONE
    Ajs_0970 NONE
    Ajs_0971 NONE
    Ajs_0972 1014593 .. 1014606 +  -9.5  -2.71144   AATTCATGGGCAAAT               GCGGC GCGT GCCGC                TGCTTCCACCGCGTG  55 468
    Ajs_0975 1017073 .. 1017094 +    -3  -2.64099   ACTGACGCACCTTTT          TCC--GCGCC CGCT GGCGCAAGGA           GTTGTCGTGGAAGCC  39 41
    Ajs_0976 1018012 .. 1018022 +  -8.2  -3.18681   GGCCCGAGGTGGCCA                 CGCC ACC GGCG                 TTGCTGGCCTTGCCC  56 307
    Ajs_0980 1022664 .. 1022690 +  -8.7  -3.37796   ATATTCCATATAAAA        CGCCACCGCCTC GCGA GAAG-GGTGGCG         TTCTGCATGCTGAGG  60 77
    Ajs_0981 1023414 .. 1023469 +   -11  -4.57837   TGCCATGGCGGTCTC CTGGCCGCCGGCACG--GCCGCGCTG CTCAGA CGGTGCGGCTGCGCGCCAGCGGCGGG TTTTTCGCGAAGTAT  95 446
    Ajs_0985 NONE
    Ajs_0987 1028572 .. 1028590 + -13.1  -5.56568   CAGCCCTCTGAAAAA             CGCCCGC CTGCC GCGGGCG             TTTTTTTGATGCTAT 100 50
    Ajs_0988 NONE
    Ajs_0989 1030572 .. 1030621 + -10.6  -4.24342   CATCCGCCTGAACTG ACGGCTG-CCCC-GTGCGCGCGCC GGCC GGCCCGCGCACAGGGGACATCGGG TTTATTCGTCGGCCG  81 25
    Ajs_0993 1034758 .. 1034778 +  -3.1  -2.62192   AGGCGGGTCTGCGCA            AGCTGGGGT AAT AGCCCGGCC            GTTGATTGACTGGAA  39 15
    Ajs_0994 1035796 .. 1035810 +  -9.2  -3.53012   GCAGTGATCCAGGCG               GCCGCT CTG GGCGGC               TTTCGCGAGCCAGCC  65 34
    Ajs_1001 1042136 .. 1042155 +  -7.8  -3.54424   GCTCGTGGCGGAGAT            CGCGCGGCG CCT TGCCGC-CG            TTTGAGCGGGTAGGG  62 1
         dut 1042719 .. 1042749 +  -8.9  -3.05384   AGCGCCAGCGCCGCT       GTCGGCACCTGCC TACAT GGCGGGTGCGCAC       TTCACTACGAGGCCC  57 40
    Ajs_1003 1043407 .. 1043427 + -18.3  -5.42862   GCCGCGCACACACAA            CGGGCTCCC GAG GGGAGCCCG            TTTTTTTGGGGCTGT 100 65
    Ajs_1005 NONE
    Ajs_1006 1045784 .. 1045795 +  -3.6  -3.90112   ATTCCGAACTGGTTT                TGCC CCCC GGCG                 TTTGCTTCGCAAAGC  56 112
    Ajs_1007 1046200 .. 1046230 + -10.5  -5.02074   GGGGCCGGGCTTGCT      GCAAACCCCGTACC GCAA GGT-CGGGGTTTTC       TTTTTTGGGCAATGG 100 67
    Ajs_1014 NONE
    Ajs_1015 1054093 .. 1054105 +  -3.3  -3.07816   GGCCCGGCAGTCATC                GACCG AGT CTGTC                TTCACTGAATGAGCG  43 1
    Ajs_1016 1056492 .. 1056505 +  -2.4  -4.59773   CAATAGCTGGTCGCG               CTTG CTGGTA CAAG                TTTTTACGGATAAAA  68 49
    Ajs_1017 1058477 .. 1058504 + -10.4  -2.75481   CTGACGGGGCGCCTT        GCTTGCCACGCG GGCG CGCGGGGCTGGC         TCCTTCACCTTCCGC  60 66
    Ajs_1020 1063362 .. 1063388 +  -5.6  -3.72576   GCTTGCGCCACAACA         CAGCGGGCGCGC GCA GCGCGTGCGGGG         TTTGCTGCCCGCCCA  60 119
    Ajs_1021 1064690 .. 1064717 +  -2.7  -4.17556   CGGCGGACTGACCGG       CACTTC-CGG-GC CCGG GCTCCGGGGGGTG        TTTATTGGCCCTGTG  59 30
    Ajs_1026 1069005 .. 1069022 + -14.1  -5.75342   CCTTCAGCAGCACCA             GCCCCGG CCTG CCGGGGC              TTTTTTTTACACCGC 100 47
    Ajs_1036 NONE
    Ajs_1037 1081684 .. 1081696 +  -4.8  -3.23216   TGGCCGACATGGTGG                TGCG CCGCT CGCA                TTGATGGTGGTCCCC  48 9
    Ajs_1038 1083816 .. 1083832 +  -3.6  -4.56597   TGCCCGGCCGAGTAA              TACGCG CCATT CGCGGA              TTTTTCAGGGGAAAC  69 146
    Ajs_1039 1085105 .. 1085122 + -12.7   -5.4505   GCCCAATCCAACGAG             GCCGCAG TTCC CTGCGGC              TTTTTTGTTGCCCGC 100 79
    Ajs_1044 1096186 .. 1096222 +  -7.4  -4.33785   AGCTCTCATAAAAAA   TAGCTGCTAAGGCGCTTG CAG CAAGCGCG--GGCAGCTA   TTGTTTTATGAGTGT  76 52
    Ajs_1046 NONE
    Ajs_1047 NONE
    Ajs_1048 1099681 .. 1099693 +  -6.2  -4.68384   CTGAGCCCGAGGAAG                GGCC GCCGG GGCC                TTTTGTTGGGTGGGT  80 37
    Ajs_1053 NONE
    Ajs_1054 1106457 .. 1106504 +  -3.9  -3.15861   GATCTTGGCCGTGTC GAGCTGGCGCGCGGTC-GCCTGC ATCT GC-GGCAGGTAGCGCGCCTGCAA TTGCTGGCCGTCCTG  45 149
        fumC 1111043 .. 1111075 + -10.6  -3.11316   GCTGTAGCAGTTGCT     TGGCCAGGC-GCGCGC GCA GCG-GCAGCGTGGCCA     TGTCTTCCATCATGC  64 330
    Ajs_1067 1123163 .. 1123182 +  -7.1  -5.37593   ACTTTGCAGACCCAA            GCCGCTT CTTGCC AGGCGGC             TTTTTTCGTTTCGGG  91 430
    Ajs_1068 1123885 .. 1123910 + -16.1  -4.56597   CTTACGCCATAAAAA         GGCCGCAGAGC GTGA GCGCTGCGGCC          TTTTTGCAGGGCGCG 100 46
    Ajs_1070 1124631 .. 1124657 + -12.3  -5.06816   TCCCTGTCCAGACAA        CCCGCAGCGGTG CACG CGCC-CTGCGGG         TTTTTCTTGGGCGGT 100 49
    Ajs_1072 1128527 .. 1128557 + -12.5  -3.01918   CTGGACTGACGTGGT       GCGGTGCACGCCC ATGCC GGGCGTGCGCTCC       TGATTTATGAGCTGC  71 32
    Ajs_1073 1129421 .. 1129445 +  -2.7  -3.80014   AGCATCAGGATGCGG          CGCAGGATGGC GTC GGCATGCTGGG          TTTCCTCCTCCATCT  56 343
    Ajs_1075 1130607 .. 1130648 +  -7.9  -5.00339   AGGGATTTGCATAAA AGAAGGC-GCCAGCGCTTGT CCA GCAAGCGCCGGCAGCTCTCA TTTTTGATTGTTCCT  93 27
    Ajs_1076 NONE
    Ajs_1077 1132971 .. 1133006 +  -6.6  -3.54475   TGTGCCGTGACTGAC    GGCGCGCTGCCTCGGC GCCA GCGGGCGTGGCGGGCC     TTGTATGCTCGCGCC  59 27
    Ajs_1078 1134135 .. 1134147 +  -3.3  -2.66316   GGTGAAGGCCTCGGG                CGCCA AGC TGGAG                TGATGTAGTCCCCCA  39 10
    Ajs_1079 NONE
    Ajs_1080 1136653 .. 1136668 + -11.8   -4.5394   ATTGCAATACAAAAA              GGCGGC CTGG GCCGCC               TTTTGCTATTTATAT 100 52
    Ajs_1082 NONE
    Ajs_1083 1139841 .. 1139855 +  -2.7   -2.7563   TGATGTTCGTCAATA               GGCCC ACTGC GAGCC               TGGTTAAAACTTTTT  39 38
    Ajs_1084 NONE
    Ajs_1085 NONE
    Ajs_1086 NONE
    Ajs_1087 1143093 .. 1143123 + -21.1   -4.4267   CTGATGCTCCCTGTG       CGGCCGGCTCCCC GTCGA GGGGCGCCGGCCG       TTTTGCGTTTTGGAA 100 37
    Ajs_1088 NONE
    Ajs_1089 1144940 .. 1144961 +  -2.2  -2.86124   CCGCTGGAGGATCAA           C-CGCGCTG ACCGG CAGGGCGAG           TCCTCTTTGCATGCC  40 17
    Ajs_1090 1145383 .. 1145422 +  -6.4   -3.8125   CTGACTGTTGACAAT  GCGCT-TCAGCGCATCG GTATCGA CGATGCGCACATGGCGC  TGTTTTACTTCCACA  62 96
    Ajs_1092 NONE
    Ajs_1093 1148368 .. 1148381 +  -2.3  -4.36914   GCGCCGTGGTGCGTG               CCCTG AAAA CAGCG                TTTTGTGGAACCACA  62 20
    Ajs_1096 NONE
    Ajs_1097 NONE
    Ajs_1098 NONE
    Ajs_1099 NONE
    Ajs_1100 1155768 .. 1155784 +  -6.6  -3.01712   GGTGTTGGGAAGCTC              GCTATG AAGAA CATAGC              TGTTAGCGCACGCCA  51 19
    Ajs_1101 1156672 .. 1156700 +  -6.6  -3.92373   TGCAGGTGCTGCTGT        GGCCCGTGCC CGTGCGGGT GGCGCTGGCC        TTTCTCCGTGCCCTG  65 144
    Ajs_1102 1157701 .. 1157717 +  -5.8  -3.12327   GTTGGCGGAATACTT             CG-GGCG CCGC CGCCGCG              TGTTCAGTGTGCCGC  51 243
    Ajs_1109 1163782 .. 1163816 +    -7  -5.16572   TGCTATCAAAAAAGA     AGCTGCTGGCGCTTGT TGG ACGGGCGCTAGGGGCC     TTTTTTACCTTAAGT  88 51
    Ajs_1120 1178232 .. 1178258 +    -8  -4.25104   AGCGCTGGCCTGAGC        CG-GTGGGCGG CACGCA CCGCCCATGCG         TTTTCATCACGACAA  76 28
    Ajs_1121 NONE
    Ajs_1122 1180731 .. 1180774 +  -5.9  -3.04144   TCACTTTTTTGATCT GCTGGCGCGGGCGCGCCCTGC CTGA GTACG-CGCGGCC-TGCCGGC TGTTCCCCATCAGGC  49 114
    Ajs_1123 1181615 .. 1181629 +  -9.2  -3.12351   GGGGAAGGGCGCTGC               CGCGCG CAC CGTGCG               TTCGATCTCGGCCAC  59 325
    Ajs_1125 1182977 .. 1183009 + -12.7  -3.13522   TTGCGTATAAAAATG      GCCGCTGGCGCTT ATGGAGC GAGCGCCAGCAGC      TATTAATACAGGAGT  73 43
    Ajs_1127 1185397 .. 1185409 +  -4.7  -4.08042   GCAGCTTCCTGCCAC                GGTGC GCG GCCCC                TCTTTTTCTGCTCAG  63 126
    Ajs_1128 1186718 .. 1186730 +  -4.7  -3.59262   TTGCGGGCATCATCC                GGAGC CAT GCACC                TTTACCGATCTGCGC  55 53
    Ajs_1129 1188015 .. 1188047 +  -3.3  -3.02324   TTGCATGAAATATTT      GCCTCTGACGCTT ATGTATC AAGCGCCAGCAGC      TATCATTTAAGTAGC  43 33
         dcd 1188919 .. 1188932 +  -2.3  -2.72558   CTGGATGTGGCTGGG               TGCCG CCAT CGTCA                TCCTTGCGCAGTTGT  39 280
    Ajs_1131 1190068 .. 1190081 +  -9.5  -3.68222   AGACGCCCCGGTACA               GGCCG TTAA CGGCC                TTGTTGGCCTTCGCC  71 84
    Ajs_1132 1191587 .. 1191604 +  -9.8  -4.54727   CCCACTGAAAACACA             GGCCGC CGTTCA GCGGCC              TTTTCATTTAAAAGA  95 33
    Ajs_1141 NONE
    Ajs_1142 1202716 .. 1202751 +   -17  -4.17089   GCGCAGCATGAAAAC    GCTTTCTTCGCGG-GCC AGC GGTGCCGCGAAGAAGGC    TTTTGGCGATTTGCG 100 30
    Ajs_1144 1204374 .. 1204398 + -13.5  -4.49337   GTGTGATTTGAAGAA          CCCGCTGGGGC GTG GCCTTGGCGGG          TTTTGTCGCTTATGA 100 100
    Ajs_1145 NONE
    Ajs_1146 1209061 .. 1209074 +  -3.8  -3.07344   TTGTAAGCGATAACG               GCAG ATTTGA CTGC                TATCTTCCACCCTGC  45 100
    Ajs_1149 1212547 .. 1212563 + -11.5  -2.69151   CGCGCGGTGGTCGTG              CCCGCGG TGC CCGTGGG              TGGTGTGTCGCACAG  62 306
    Ajs_1152 1214931 .. 1214955 +    -7  -2.72991   CAGGTCCCCCTTGTT          GCGGCGCACG CAGAA CTTGCCCCGC          TGCTTGCCGCTGTAC  48 64
        surE NONE
    Ajs_1161 NONE
    Ajs_1162 NONE
    Ajs_1163 1229282 .. 1229310 +  -9.5  -3.54307   ATCTCCAACCCAAGG        CGCAGCCTCCCGT CTG ATGCGAGGCTGCC        TTTCCAGGGACTGTT  68 127
    Ajs_1164 NONE
    Ajs_1165 NONE
         ndk 1231882 .. 1231933 +   -10  -2.88544   ACTCGCGCTAATGCA GTGGCTCCGCGTGCCGGGCGGTC CTGGTTT GGCCGCCCC-CGCGCGGATGCGC TATGTGGGCGTGGGC  61 30
    Ajs_1167 NONE
    Ajs_1168 NONE
    Ajs_1169 NONE
        ispG 1236215 .. 1236247 +  -4.8  -3.03624   GCTATAAATAATATA      GCTTACAGCGCTTG ATGGA TAAGCGCTAGAGGC      TGATTTGATTCATAA  47 56
        hisS NONE
    Ajs_1172 NONE
    Ajs_1173 NONE
        engA 1240777 .. 1240801 + -11.4  -2.80113   CAGAACTCCTGAGCC          CCTGGACGGC GTATG GCCGTCTGGG          TGTGGTAAGGTGCTG  63 29
    Ajs_1175 NONE
    Ajs_1176 NONE
    Ajs_1177 NONE
    Ajs_1178 NONE
    Ajs_1179 1244890 .. 1244904 +  -5.6  -3.35996   GCCTGGCCGCTTTGG               GTCCCG GGG TGGGGC               TTATCCATGCCGGTA  52 40
    Ajs_1180 1246083 .. 1246094 +  -2.2  -3.93262   TGGATGGCAACTGGG                TCGT AAAG GCGA                 TTTGAGTTTCTTCAG  54 9
    Ajs_1181 1247527 .. 1247539 +  -3.3  -3.03338   AGTGGGGCAGTTGGA                GTGTG TCG CGCGC                TGTTAAGGCGATTGT  43 47
    Ajs_1182 1248499 .. 1248530 +    -6  -4.87665   ACTATCAAACGCTCA      TGAGAATAGAAGTGA AGT TCACTTCAATTC-CG      TTTTTATGAGTGAAG  82 423
    Ajs_1183 1254686 .. 1254698 +  -6.2  -2.63079   CGATTGCGTCAACGT                CGCG CACAT CGCG                TCCGTTGTCTGCAAG  46 84
    Ajs_1184 NONE
    Ajs_1185 NONE
    Ajs_1186 1257647 .. 1257670 +  -4.5  -4.31379   CGTAGAGAGCCGATC          GCGCTATGC TCGCGC GCATGGGGC           TTTTCATCGATTCCT  66 36
    Ajs_1187 NONE
    Ajs_1188 1259484 .. 1259507 +  -9.6  -3.51924   GCAAACTGCTTTTCT          GTGCGCATCA TTGT TGATGAGCAC           TTCTATCCCTGGAGA  65 137
    Ajs_1189 1260980 .. 1260995 + -11.8  -4.99035   GGCTGTTGTCAACAA              GGCGGC TCCG GCCGCC               TTTTTCTATGGATGG 100 61
    Ajs_1190 NONE
    Ajs_1191 NONE
    Ajs_1192 1264353 .. 1264384 +  -8.8  -3.25652   GATGAGTGAAACAAG      GC-GCTGGCGCTT TAAGGAT AAGCGCTAGCAGC      TATTGATTCAATAGC  60 32
    Ajs_1193 1265519 .. 1265567 + -14.4  -4.56597   TCGCCCGCGTTGGCC ACCTCAGCCCAGCGACACCACG ACCGG CGCGTGGTCGCTGGGCTGCGGA TTTTTGCGCGGAGCG 100 63
    Ajs_1200 1271676 .. 1271712 +  -6.6  -4.14739   ATGCTCCTTAAACGA    TAGCTGTTAGCGCTTG ATAGG TAAGCGCTAGAGGCTG    TTTTGGCCTAAATCC  69 23
    Ajs_1203 NONE
    Ajs_1204 1276128 .. 1276138 +  -8.2  -3.05384   GCTGCTGCAGCGGGT                 GGGG CGG CCCC                 TTACATGCGCGCGGC  57 100
    Ajs_1206 NONE
    Ajs_1207 1281572 .. 1281608 + -10.7  -2.73124   GCCGTTTGACCTATT    TCACCGGGGTGGCCTGC TGT GCCTGCCATCCGGGTGG    CTTTCAGAACTGCGC  63 67
         tig 1283146 .. 1283177 + -10.8  -3.33711   TGAGGACGAAACCCG      GCGGGGCTTGTGCT TTGC GGCACAAGCCCCAA       TTCACTTTCTGGGTA  69 76
        clpP 1283845 .. 1283871 + -18.1  -5.39681   TTGGGCCGGCGCGCG         CGGCGTTTCCC CCTGT GGGAAACGCCG         TTTTTATTTCGTTAT 100 43
        clpX 1285286 .. 1285299 +  -6.7  -3.08996   CCGGGTTGAAAAATG               TGGTC CATG GACCA                TATTCCATGGAACTA  51 121
    Ajs_1211 1287972 .. 1287985 +  -8.1  -5.26875   AAGTCATTGAAAAGA               GGAGC TTCG GCTCC                TTTTTTCATTCCAGC 100 247
    Ajs_1213 NONE
    Ajs_1214 NONE
    Ajs_1215 1291796 .. 1291846 + -21.8  -3.53012   CTTCTGATCGGAAAC GGTGATGGGCAAGCCGCTACGGGC TAC GCCCTGCGCGGCTTGCCCATCGCA TTTAACAACACGCCA 100 34
    Ajs_1216 NONE
    Ajs_1219 1295294 .. 1295304 +  -4.6  -3.35679   TCGAACCGCTCGGTC                 GCCG GAG TGGC                 TTGTACGTAGGGCCG  51 99
    Ajs_1221 NONE
    Ajs_1222 NONE
    Ajs_1223 NONE
    Ajs_1224 1300832 .. 1300844 +  -4.9  -4.64144   TTAACGTCTATAACT                TTAAC GTG GTTAA                TTTTTGCGGATTATT  74 136
    Ajs_1225 1302869 .. 1302926 + -13.7   -2.5655   GGCTGCCGGCCCGTA CGCT--GGC-CGTCATGGCCGATGCG GCATGCTCA CGCATCGGCCATGACGAGCAGGAGCG ATTGGTATGCATGAC  71 223
    Ajs_1226 NONE
    Ajs_1236 1315177 .. 1315191 +  -5.6  -3.18264   GGATACTGAGGTTGC               CCCCGA ATT TCGGAG               TTCATAGCTCAACCC  51 32
    Ajs_1239 1317461 .. 1317483 +  -4.7  -2.76696   GCGTGGCCAATGGAT           CGGGCTGGC GCTCA GCCAACCGG           CTTCTTGAAGACCCG  43 327
    Ajs_1242 NONE
    Ajs_1243 1323772 .. 1323786 +  -6.4  -3.34894   TCCCCAATCTCTACT               TCTGAG TGG CTCAGG               TATTTGAGGGGACTT  55 393
    Ajs_1246 NONE
    Ajs_1247 NONE
    Ajs_1248 1327218 .. 1327231 +  -5.2  -3.33696   TTTGCACCTGACCCG               GCGC TATCAC GCGC                TTCCTTGGAGCCGAC  51 81
    Ajs_1265 NONE
    Ajs_1266 NONE
    Ajs_1267 NONE
    Ajs_1268 NONE
    Ajs_1269 NONE
    Ajs_1270 NONE
    Ajs_1271 NONE
    Ajs_1272 1349038 .. 1349062 +  -6.3  -2.78463   GCGATCAGGTAGCTT          TCGGCCCAGAC ATA GACTTGGCTGA          TGTAGTAGCGGAAGT  47 400
    Ajs_1280 NONE
    Ajs_1281 NONE
    Ajs_1282 NONE
    Ajs_1283 NONE
    Ajs_1284 1357953 .. 1357978 + -14.7  -3.07994   GAGGCGCTGAAAAAA         AGCCGACGACC TCTC GGTCGTCGGCA          TTGCGTGAAGTTCAG  78 47
    Ajs_1301 1371108 .. 1371123 +  -7.5  -3.65351   CTTCGGTCAGCACGG              GGCGC AGGTCA GCGCC               TTTGAATCGCAGTGA  62 109
    Ajs_1322 1389656 .. 1389671 +  -2.5  -3.59979   GTGGTCGTACTTTTC              GTGCA GATTGG TGCGC               TTTCGCCTGAAGCCC  49 53
    Ajs_1323 NONE
    Ajs_1324 1393221 .. 1393241 +  -5.3  -3.68222   TCGACCCTGGCATCG            GCTCACCGA CGC TCGGAAAGC            TTCTTGGCATTCCAG  58 173
    Ajs_1336 1405188 .. 1405230 +  -6.9  -3.99324   TCCAAGCGCCATGTG CGCGGCGCTCACTGAGC ATTGCCTGG GGTCGGTGAGCGACGGG TTTCTGGTGCTGGCG  67 11
    Ajs_1337 1407180 .. 1407191 +  -7.2  -3.16683   GGTGGCTGATCGGTT                CGCG GTGC CGCG                 TTCGTAGCCTAAAGT  56 7
    Ajs_1338 1407937 .. 1407947 +  -3.2  -3.04398   AAACGTAAGTGCTTG                 TCGT GCA ACGG                 GTTTTCGGAGCAAAG  43 141
    Ajs_1340 1410429 .. 1410439 +  -2.4  -3.54543   CCGATGGCGATGCGT                 GCGG CGG CCTC                 TTTGAGCCGGTAGCT  48 51
    Ajs_1345 NONE
    Ajs_1346 NONE
    Ajs_1347 NONE
    Ajs_1348 1419127 .. 1419148 + -12.3  -2.73875   CTAGTGACTGCCTGA           CGCTTCTGC CGAT GCAGAGGCG            TACTGTTCAACGGGG  66 152
    Ajs_1349 1419758 .. 1419769 +  -7.2  -2.56914   GATCGCACAAGACAA                GCGG GTGA CCGC                 TAAGTTCATGAAGTG  47 352
    Ajs_1358 NONE
    Ajs_1359 1429177 .. 1429212 +  -4.7  -3.16881   CGAGGGACAGCACTT    TCCC-TGGATAGAGGC TCGAT GCCTCGATGCAAGGGG    TTGATCGCCTGCCTC  48 15
    Ajs_1363 1432396 .. 1432416 +  -5.4  -3.75629   TTTGCCCAGAGCCTG            CAGTGCGT AGTAC ATGCGCTG            TTTGGCTTCCACGTC  57 373
    Ajs_1372 NONE
    Ajs_1373 1442468 .. 1442483 +  -2.5  -3.19936   AGCTCGGCCCGTACA              TGGCG ATGACG TGCCA               TTGAATTCCCTGGTT  42 512
    Ajs_1379 1448284 .. 1448337 +  -4.2  -3.64984   CGAGTACCATTATTT GAT-GAT-TACTTTTGAGACACCACA CTAG TGTGGTGTCTCAAAAATAGATAGAAC TATTTTGACCGGTGT  53 24
    Ajs_1380 1449522 .. 1449554 +  -6.4  -3.16564   AATCCGCCAAACCCC     CGTGATTTCCGAGCCT CGA AGGC-C-GAAATCCCG     TTAATCCGCTCGGAA  53 80
    Ajs_1385 1453724 .. 1453739 +  -3.2  -3.13141   GGGCCGCCAGAACGC              CGG-GGC GGT GCCTTCG              TATGTTCGCGTTTTC  44 56
    Ajs_1386 1454674 .. 1454686 +  -3.3  -4.08216   ACGGTGCAATTGCAG                CCGCT CGA AGCGC                TTTTGCACCCACTGC  59 252
    Ajs_1388 NONE
    Ajs_1389 NONE
    Ajs_1390 1458571 .. 1458581 +  -8.2  -3.61398   ACATCATGAGCATGT                 CGCC GAA GGCG                 TTGTTCAGCCCCACC  62 220
    Ajs_1423 1489419 .. 1489435 +  -6.5  -3.12847   TCGAAGACGGTTACT              CAGTCCG GCT CGAACTG              TTGGGTGTGCGGATT  53 43
    Ajs_1429 1494107 .. 1494132 +  -3.3  -4.42639   GAGTGGGTCAGAATC         CATTGCAGGGCT TTC AGCT-TGCCATG         TTTTCCTTCCCGTGT  66 210
    Ajs_1457 1517885 .. 1517896 +  -7.2  -3.74251   CTCGATCAGTGAACG                GCGC GCCT GCGC                 TTTGGTGGGACTGTC  65 87
    Ajs_1463 1522754 .. 1522791 +  -2.7  -4.56597   CTCGGGCGTGCTGTG   TCGTCGCGGAC-GTAT GGGTTGA ATGCTGACTGCGACGG   TTTTTCACCGGAAGA  68 51
    Ajs_1464 NONE
    Ajs_1465 NONE
    Ajs_1466 NONE
    Ajs_1467 1524641 .. 1524665 +  -5.6  -4.25848   GATTCCGGGTCGACC         GG-CTGGGCGC GTCC GCGCCCGCACC          TTTTGCTGGCAACTT  71 55
    Ajs_1468 NONE
    Ajs_1469 NONE
    Ajs_1470 NONE
    Ajs_1471 1530350 .. 1530363 +  -4.5  -2.88544   AGTAGAACCAGCCAG               CGTCA ACCC TGGCG                TATGTCCAAATGACG  44 83
    Ajs_1472 1530933 .. 1530944 +  -2.2   -4.2528   TGAGACAAACGACCT                G-CGG GCA CCGGC                TTTGTTGCCTTGACG  62 1
    Ajs_1475 NONE
    Ajs_1476 1532723 .. 1532742 +  -3.4  -3.31144   AGACAGAGACGATGC            CCACGGAC GCCT GCCAGTGG             TTCTACGAGTGCGAG  46 92
    Ajs_1478 1533351 .. 1533367 +  -9.3  -2.60194   AACAGCTACGAACTC              CCCCCGG GTG CCGCGGG              CTTGGTTGCCGCGCT  56 40
    Ajs_1479 NONE
    Ajs_1480 NONE
    Ajs_1481 NONE
    Ajs_1482 NONE
    Ajs_1483 1541209 .. 1541219 +  -6.8  -3.01712   GGTGTACTTGACAGA                 GGTC ATC GACC                 TGTTCAGCCGCCAAG  51 287
    Ajs_1486 NONE
    Ajs_1487 1544155 .. 1544165 +  -2.4   -3.7614   ACATGGCTAAAGATA                 CCAC CCT GGGG                 TTCTTCGTCCTGGTT  52 113
    Ajs_1490 NONE
    Ajs_1491 NONE
    Ajs_1492 NONE
    Ajs_1493 1547498 .. 1547513 +  -7.5  -2.70932   GGTCGGCGTGGCAAA              CGCCG ACAGCC CGGCG               TGGTTCGCAGCGCCG  52 317
    Ajs_1494 1549074 .. 1549084 +  -2.4  -3.33425   GGTGGAGTGCTCTGC                 TGGC CGC GCCC                 CTTTTGGTTTGCCTA  45 153
    Ajs_1495 1551352 .. 1551368 +  -7.9  -3.38812   GCGGCACGCCGACGG              CATGCCG CTG CGGCAGG              TGTTCTTCAGCGAGC  58 283
    Ajs_1497 1554092 .. 1554103 +  -2.2  -3.01712   CTCCCAGCGTCCGCA                CGAT CGAG GTCG                 TGTTGCACGACACCA  41 122
    Ajs_1521 1575348 .. 1575359 +  -5.8  -4.30987   GAGCTTGGGCACCCT                GCCA AGGC TGGC                 TTTATTCTCACAGGT  71 455
    Ajs_1547 1600479 .. 1600489 +  -2.4  -3.41581   ACGGATCTCATCTCG                 GAGG CGA CCGC                 TTGGTTGGTGCCTTG  46 405
    Ajs_1553 1606488 .. 1606518 + -14.7  -2.59743   GCAGGTGCGTGGAAA      CG-GGCGGAAGGGG GTAT CCCCTCCCGCCACG       GTTCGTCTATGCGTT  74 52
    Ajs_1555 1608178 .. 1608193 + -10.4  -2.94912   GCCGGTGGCCAGGAA              GACCGC GATC GCGGTC               TCTATGCCTTCGCAC  60 280
    Ajs_1561 1613068 .. 1613092 + -14.2  -3.09635   GGACAACCGGCCGCG          CGCGGGGCCG TTTGC CGGCGCCGCG          TTGAATGCTGCCGGT  78 58
    Ajs_1562 1614000 .. 1614012 +  -2.6   -4.1043   TGTTCGGAGGATTGG                GCGG CAAGT TCGC                TTTCTCGTATTTCAC  58 321
    Ajs_1566 NONE
    Ajs_1567 1620581 .. 1620608 + -11.2  -2.78384   GCGGCCGCGGCCTGG        ACCCAGGCGTCG CGGT CGACGCCTGGAA         TGTCGTGAAGCAGGA  60 280
    Ajs_1571 1626860 .. 1626887 +    -9  -3.28712   ATGAAGGCGGGCCTG        CTCCC-GGCGCCG AGT CGGCACCAGGGCG        TTCTCACAAGAGGGG  63 46
    Ajs_1573 1628377 .. 1628393 +  -7.9  -3.28912   GGCAGCACAGGTACA              GCGCCAG ATG CTCGCGC              TTCATCTCGATGTCG  56 449
    Ajs_1575 1628944 .. 1628981 + -15.6  -2.64155   CAATCGTGATCCAGC   GGTCGGCGATCCGGTC CAGATA GACCAGATCGTCGGCC    TCGATTTCGCCCGCC  74 67
    Ajs_1582 1639584 .. 1639605 +  -2.1  -3.40522   GCCGCGCGGCGTGAC           GCCGAGGGG AGCG CCGCTTGAC            TTGTCGTGCGCCGGT  47 5
    Ajs_1583 NONE
    Ajs_1584 NONE
    Ajs_1585 1642816 .. 1642827 +  -7.2  -3.05384   GTGAGCGGACGCAGA                CGCG CTGT CGCG                 TTCCATGGCCCAGGC  54 37
    Ajs_1586 1644012 .. 1644026 +  -2.1  -4.40894   AGTCTTTTCGAATAT               TTCGA CTATT TCGAG               TTTTGCTATACTTTG  65 328
    Ajs_1587 NONE
    Ajs_1588 1645513 .. 1645523 +  -5.4  -3.61715   TTCACAGCCTTGGGT                 TCGA CGT TCGA                 TTGTTCGGCAAGGTG  54 355
    Ajs_1590 NONE
    Ajs_1591 1648261 .. 1648286 + -16.9   -2.6039   GGCCTGACGTGCCAA         CCGGC-CCCTGG ACA CCAGGGAGCCGG         GTTCTAGCATGGTCT  83 34
    Ajs_1592 1648881 .. 1648905 + -12.2  -3.14132   GCGGGAGACTGAACG          CATGGCAACC ACGGC GGTTGCCGTG          TTCATCCCCAAGGAG  70 73
    Ajs_1593 NONE
    Ajs_1594 NONE
    Ajs_1595 NONE
    Ajs_1596 1651969 .. 1651979 +  -6.8  -2.77899   TCGATTGGAGGCACC                 GGTG GAA CACC                 TGATTCATCCGAAGC  49 78
    Ajs_1597 1652908 .. 1652923 +  -8.2   -2.9356   TCTTCCGAGGCGCTG              GCGCGG TGTG CTGCGC               TGTCTCGATATGGGT  55 109
    Ajs_1598 1653484 .. 1653504 +  -2.5  -4.41047   AGCTTGATGCGTCAT           GCC-GGTG GGGTAG CGCCTGGC            TTTTGCTTCGGCAAT  65 34
    Ajs_1600 NONE
    Ajs_1601 NONE
    Ajs_1602 1657559 .. 1657569 +  -3.2  -3.27498   GCTGAATGGCAGGAG                 GTCG TCA TGAC                 TTCGTCTGCCGTGTA  46 16
    Ajs_1603 1658367 .. 1658380 +  -4.5  -3.27653   GTGCGTGGACTTGAA               GCCGA GCGT TTGGC                TGTTCTCATGAAGGT  48 282
    Ajs_1604 1660247 .. 1660272 + -11.9   -5.9362   GCCAATATCAAAAAA         GCCACTGCAAA ATTA TTTGCAGCGGC          TTTTTTTGTGTTTTC 100 452
    Ajs_1605 1660815 .. 1660848 +    -6  -2.53911   CTATCAAAAAATCAC     TTCG-GTGGAAGGCG GATCG CGCCATCCAGACGAA     TCACTTCGCCATTGA  45 131
    Ajs_1609 NONE
    Ajs_1610 NONE
    Ajs_1611 1666744 .. 1666762 +    -3  -3.62597   CCGCCTGACGGACGG             GCATGGCC TCC GGCAATCC             TTCTTCCGGCGTGCG  51 33
    Ajs_1612 NONE
    Ajs_1613 NONE
    Ajs_1614 NONE
    Ajs_1615 1670116 .. 1670140 +  -4.3  -4.12456   ATGCGCTGTTCGAAG         GCCGAGAGCG CTTCCT TGCTCT-GGC          TTTTCAGGCTGATGT  62 249
    Ajs_1617 1673588 .. 1673602 +  -3.4  -2.52464   GCCAGCTCAGCATGA               CGGGGC CGC GCTCCA               TGGCTTCGCCCAACA  39 476
        cysS NONE
    Ajs_1624 NONE
    Ajs_1625 1680017 .. 1680034 + -10.5  -5.66684   CCGATCCTTGAAAAA             GGTGGGG GAAT CCCCGCC              TTTTTTTGTCACTTA 100 72
    Ajs_1627 NONE
    Ajs_1628 1684520 .. 1684536 + -10.8  -5.60993   CCGCCAAACAAAAAA              CGCGCC TTCAT GGCGCG              TTTTTTTATGCCGGC 100 173
    Ajs_1631 1688545 .. 1688560 +  -4.6  -3.93868   TCAGGTAAGCGCTAG              CGCCTG ATTT CATGCG               TATTTCTTTTCGAGC  60 63
    Ajs_1637 1697065 .. 1697120 +  -7.5  -5.00616   TGTGTCCTACACCGT GATGCGCCCCTGGCGAAC-CGCCCCGC CGCA GCGG-GCGTGTCTACCATGCGTGCATC TTTTTTCGGCAAACG  93 82
    Ajs_1638 1697872 .. 1697901 + -13.5  -3.60948   TTCACGCGCGGCTTT       GGCCGCCTGGCCG TTGA CGGTTACGCGGCC        TTTGCCGATCTCTTC  77 450
    Ajs_1642 1701413 .. 1701437 + -13.5  -2.93623   AATGGTCTAAGCCCG          GCGGCGCCGCA GTG TGCTGCGTCGC          TCCTCTTTTGAGAGC  74 31
    Ajs_1643 NONE
    Ajs_1644 1703882 .. 1703896 +  -3.6  -3.53031   AGTATAGCTCTATGT               TGAGAA TGG TTCTTA               TTAATTTGCAATGCG  49 195
    Ajs_1645 NONE
    Ajs_1646 1705120 .. 1705143 + -10.2  -2.66106   GCGCAGGGGTGAAGC          GGCGCACGGC TTGC GCGGTGTGCC           TGCATTGTTGCCATC  59 29
    Ajs_1647 1706257 .. 1706288 + -23.2  -2.57132   CGCTCGCCGCGCCAA      GCAACAAGGCCTCC GTGT GGAGGCCTTGTTGC       GTTGTGCGCGGAGAA 100 44
    Ajs_1653 1713332 .. 1713358 +  -5.1  -3.64703   TCTCCATCACCACCA        CCGCGCTGACAGC CAT GGTG-C-GCGCGG        TTTCGATCGCAGCGC  57 328
    Ajs_1657 1718830 .. 1718866 + -25.4  -5.55664   ATTTGGTGATCAAAA    TAGCTGCCAGCGCTTG TCAAT CAAGCGCTGGCAGCTA    TTTTTTTGGTAGTAA 100 40
    Ajs_1658 1720235 .. 1720254 +  -4.9   -4.2828   TGGACAGAATCTCGC            GCTGCCC CAGGTT GAGCAGC             TTTTCCTCGATGCGC  66 251
    Ajs_1662 1727487 .. 1727510 +  -3.8  -3.19091   ACTGCTTGCGCTGTT          GGCGCAAGGTG GCT CGC-TTGCACC          TTGATGAATCCATGT  47 217
    Ajs_1663 1730551 .. 1730567 +  -6.5  -3.90048   TGTCCGTGCCCTTGT              CATCGGC GCC GCCCATG              TATTTTTCGGAGGCG  64 385
    Ajs_1666 NONE
    Ajs_1667 1733008 .. 1733034 + -10.1  -3.05463   TTGCGCGCAAACAGT        CCGGGCACACCG CGTG CGGTG-GCCGGG         TTCACTGAAAACAAT  60 384
    Ajs_1669 1735062 .. 1735096 + -12.8  -4.56597   TCGAGCCCCTCAAGG     GCCGATGCGGCCCTTG GGT TAGTGGACGCATCGGC     TTTTTCCAGGCGCCG 100 176
        infA 1735565 .. 1735590 + -17.7  -4.95487   GACCAATTGAATCAA         GGGGTTAGGTC TATT GACCTAACCCC          TTTTGTCTTTGTTTT 100 176
    Ajs_1671 1736132 .. 1736152 +  -9.7  -4.74801   AGGGGGATCATTGAA            GGCTGGC TTGAAGC GCCAGCC            TTTTTCCTGGACTTG  93 125
    Ajs_1672 1736954 .. 1736971 + -14.1  -3.40403   GACGGGCATAAAAAA             CGCGGCC CGAA GGCCGCG              TTGTAGTGCGCGAGG  79 30
    Ajs_1678 1742491 .. 1742504 +  -6.7  -3.44146   TCGTTGCATCCCTTG               TACGC TGCG GCGTA                TTCATTCTCACAAGG  57 125
    Ajs_1679 1743792 .. 1743811 +   -15  -5.44721   TGGGACGACCTTTGG            GGCCCGAG TCTC CTCGGGCC             TTTTTTTCACCTGCT 100 53
    Ajs_1680 NONE
    Ajs_1681 NONE
    Ajs_1682 NONE
    Ajs_1683 1747691 .. 1747701 +  -6.8  -3.30124   GTTAGATGTCGGTGT                 GCAC GGC GTGC                 TTGTCCCGGCTGAGA  55 98
    Ajs_1684 NONE
    Ajs_1685 1751159 .. 1751202 + -24.7  -5.13722   TTTCGGACTGAAACA ACAAGCGCCCCGCGCAGAC GATGTG GTCTGCGCGGGGCGTTTGC TTTTATTTTGATAGC 100 53
    Ajs_1686 1752676 .. 1752690 +  -3.4  -3.53012   ACGGGCAATACCGAG               ACGCCG AGA CGGTGA               TTTGGCCAAAGCCCC  49 44
    Ajs_1687 1754678 .. 1754703 +  -3.1  -2.90392   CGCTCTCCGCAGGGT         GGTGGTCGCCC GCAT GGGCAACGGTC          TATGCTTGCCGCATG  42 48
    Ajs_1688 1755556 .. 1755574 + -14.6  -3.51976   GCGTTGCCAAGCCTC             GCTGGGGT AGC ACCCCAGC             TTCGTTTGGCGCCTT  83 365
    Ajs_1695 1763797 .. 1763809 +  -4.7  -2.92018   CAAGGGCGAACCACC                GCGCC AGG GGCAC                TATCCTTGCGGTCTT  46 44
    Ajs_1696 1764276 .. 1764307 +  -9.6  -3.07043   TTTAAATGAAAAGTG      GCT-CTAGCGCTT ATGTATC AAGCGCTAGAAGC      TATTGAAATAATAGC  60 43
    Ajs_1697 NONE
    Ajs_1698 NONE
    Ajs_1699 1766774 .. 1766799 +  -2.5  -2.86676   CTTCCCACGCGTGGG         CTATGTGCTGCG CCG CGCCGCATG-AG         ATTTCCATTCATAGA  40 1
    Ajs_1700 1767717 .. 1767743 +  -2.9   -4.2803   GGGGGCGCAACTGCG        GGCGG-CGTTGC GCGC GCAGTGACCGGC         TTTTGAATTGAAATG  64 4
    Ajs_1702 NONE
    Ajs_1703 1771689 .. 1771701 +  -6.2  -4.09739   GTGAATGCGGTCGTA                GGGC GCGTA GCCC                TTTTCAGCGGCTTCA  66 354
    Ajs_1707 NONE
    Ajs_1708 NONE
    Ajs_1709 1779315 .. 1779348 +  -8.7  -3.21099   GCCGACCGTCTGCCC     CTGCGCGAGCCCGATG ACC CGCTGGGC-CGCGCCG     TTGATCGTGCGCACG  56 287
    Ajs_1712 NONE
    Ajs_1713 NONE
    Ajs_1714 1784621 .. 1784657 + -13.1  -4.89009   CGGCTTCTTTATTGA    TAGCTGCTAGCGCTTGT CAA ATAAGCGCTAGCGCCTG    TTTTTGCTTAAATGT 100 41
    Ajs_1716 NONE
         tmk NONE
    Ajs_1718 NONE
    Ajs_1719 1788693 .. 1788717 + -12.9  -5.61881   GCGGGCCCCGCAGGA          TGCCGACCG CGCCCGC CGGTCGGCA          TTTTTGTTTTTCGAG 100 53
    Ajs_1720 NONE
    Ajs_1721 1790457 .. 1790471 + -11.4  -3.09516   TTGCTCCATGACCAC               CACGCG GTC CGCGTG               TTCGATGGTGGAGAG  66 251
        tolB 1793606 .. 1793616 +  -3.2  -3.72027   TTTTTCGAACAACTG                 CTCT TCA GGAG                 TTATTAATGAACCGT  54 48
    Ajs_1724 NONE
    Ajs_1725 NONE
    Ajs_1726 1795870 .. 1795894 + -12.2  -5.71295   AGTACACAAAGGAAA          CCCTGCTATC TAAAC GGTAGCAGGG          TTTTTCTTTTTCTGT 100 166
    Ajs_1735 1802152 .. 1802170 + -11.7  -3.35996   CACATTAATGATGCT             GGCCACC CAGTC GGTGGCC             TTCTGGCTGGCGGTG  70 117
    Ajs_1738 1804191 .. 1804203 +  -4.8  -3.63991   CTCGATGGCCTCGAT                GCTG GCGTG CAGC                TTCTTGGGCGTGATC  55 509
    Ajs_1741 1807472 .. 1807484 + -10.5  -3.23395   GCGGGGCACCATGAG                GGCCG AGC CGGCC                TTGATCATCATGCGT  63 404
    Ajs_1744 1810156 .. 1810180 +  -7.8  -6.02919   GGTAGCGCGGCGCCA         TGGCCCG-GGC TGAG GCGACGGGCCA          TTTTTTTATTTCTGG 100 13
        rnhA 1810941 .. 1810967 +  -5.9  -3.53012   TACCGAACTCCAGCA        CGGTGGGGCCCAG CCA CTGG-TCC-ACCG        TTTCACGCGAAGGCG  56 315
    Ajs_1750 1815342 .. 1815361 +  -6.3  -4.07568   GCGTGTCTCATCGGC            GCGGCGC CCGGCT GCACCGC             TTTTCCGGGGGAGGG  67 65
    Ajs_1754 1820697 .. 1820707 +  -8.2  -3.48276   ACCATCGCCTGCAGG                 GCGC GCT GCGC                 TTGTGTGCAGCCCGC  60 352
    Ajs_1758 1825495 .. 1825518 + -15.2   -5.4505   CCACTGCCTCATCCA          GCCCGCCGGC ACAT GCCCGCGGGC           TTTTTTCTTGCAGGG 100 69
    Ajs_1759 1826200 .. 1826217 + -14.1  -4.72986   CTGCATCTCTGCCAA             GCGCGCC CATG GGCGCGC              TTTTTCATGGCCGTG 100 52
    Ajs_1761 1829441 .. 1829460 +  -9.2  -2.78384   GGCCTGAGCCCCCTG            TGGCGGCC GCTG GGTCGCCG             TGTCGTGCCCACCGC  57 34
    Ajs_1762 1830204 .. 1830243 +    -5  -2.72379   CATCATGGCCTTGCG  CTCGTGC-ATGGTCTGCAC GAT GTGCAGCTCATCGCAGAAG  TGGTTGGCCAGTTCC  43 391
    Ajs_1769 1835493 .. 1835504 +  -5.8  -3.57144   CCGAGATGCTGCTGG                GGTC GGAA GACC                 TTTAAGCATCAAAAA  57 9
        ilvH 1836124 .. 1836134 +  -6.8  -2.91264   ATCGGCCGTGGCGAA                 CGCA TCC TGCG                 TGTGTAAGTACGACA  50 8
    Ajs_1771 1837256 .. 1837271 + -10.4  -5.08824   GGCGTCTTTCCCCAA              GGCCAC CCCG GTGGCC               TTTTTTGCGTGCGGG 100 66
    Ajs_1772 1838350 .. 1838376 + -10.1  -5.61881   CACACCTACTTCCCA        CGGCCCGTGAGC ACCA GCG-ACGGGCCG         TTTTTGTTTTTCCGG 100 151
    Ajs_1773 NONE
    Ajs_1774 1841721 .. 1841766 + -16.4   -4.4009   ATAATTCAGGCACTT TCTAAAAGAGTCGCGCAAGG CATTGA TCTTGCGCGACTTTTTTTGA TTTTGTACACTGCCA 100 52
    Ajs_1775 1843009 .. 1843027 +    -3  -3.73224   CGCTGCCCAGCCGTA             TAACCCAG CGC CTGGGAAA             TTTCATCGGCGGTGG  53 143
    Ajs_1782 1852140 .. 1852152 +  -3.3  -3.38324   CCGCGCCACGCCCTG                GGGCA CTG TGGCC                ATTTTCTTGAGCGTG  48 263
    Ajs_1787 1856237 .. 1856255 +  -5.8  -4.14472   CCAGCCCCAGGTCAG             GCGCCGGG CCA CCCAGCCC             TTTTGCCCGTCTTCG  67 111
    Ajs_1799 1868388 .. 1868398 +  -2.4  -2.90496   AATATAGCTTCCAAA                 GCGC CCC GCAC                 TCCTTTGGCGAAGGG  40 101
    Ajs_1800 NONE
    Ajs_1801 1870936 .. 1870963 +   -12  -5.27335   CGCCAGTCAAAAGAA        GGGTTAGCAGGT ACTC ACCGGCTAGCCC         TTTTTCTTTGCGGCC 100 239
    Ajs_1802 1872809 .. 1872847 +  -4.5  -3.65425   AGTGACGCTTTCAGG  GCGCATGCCTGCGTTCGC CTAT GCCAAT-CAGGCTTGCCC   TTTGCCCTGTCTGCG  53 164
    Ajs_1803 1873899 .. 1873910 +  -7.2  -3.25823   CCTCAGATGAAGACA                GCCC GCGA GGGC                 TTCATCTAGGAAGGC  58 292
    Ajs_1804 1875051 .. 1875101 +    -2  -3.83066   CGTTCTTTTTCTTTT GACGCAGGAGCGGGGGTAGAAGGCA AAAC TGC-TTC-ATTACC-CTCCTGCATC TTTGATAATATCGTT  54 160
    Ajs_1806 1877170 .. 1877180 +  -2.4  -3.33744   AGCGGCACCGATAGG                 CCGG TTT CGGG                 ATTTTTGAGCACGCC  44 91
    Ajs_1810 NONE
    Ajs_1811 NONE
    Ajs_1812 NONE
    Ajs_1813 1885428 .. 1885438 +  -2.4  -4.41241   TTTACAGCGCAGAAG                 TCGG CTC CCGC                 TTTTCTGGCGATTTC  65 196
    Ajs_1814 1886761 .. 1886819 + -22.6  -2.57647   CCCTGACGCCCACCA CGCGTTCCTAGAATGAAGGGCGCCAGTC CGC GACTGGCGCCCTTTTTTGTACGAACGCC CTTCCTGTCATGCCT 100 35
    Ajs_1815 1887891 .. 1887910 +  -6.3  -4.09739   GGCCTTGGCGTCGTC            ACGCGCC TAGATT GGCGCGG             TTTTCACGCCATTCG  67 260
    Ajs_1818 NONE
    Ajs_1819 1891794 .. 1891825 +  -4.4  -4.72272   CGCTTGTACATCACC     TG--GCCGGAGCGC ATTGAC GCGCGCCGGCGGCA      TTTTTCATCACCACA  75 9
    Ajs_1820 1893039 .. 1893063 +  -2.7  -2.70932   CAAGGTGGAGATCAG          CACCACGTAGT CGG GCAGCTTGGTG          TCCTTGCCGACCAGC  40 223
        sucA NONE
    Ajs_1823 1898405 .. 1898432 +  -8.3  -5.31275   CGACGCATACGAAAA        CCCACCCCCGG CCCGGT CCAGCGGTGGG         TTTTTTCTCATCACC 100 54
    Ajs_1824 1899907 .. 1899949 + -22.2  -4.58395   GATAATTTGAGGCAA AAATGGCTGCCAGCGCTTGT GTG GCAAGCGCTGGCAGCTATTG TTTTTGAAGCATAGG 100 39
    Ajs_1825 NONE
    Ajs_1826 1901788 .. 1901804 + -10.8  -3.02043   GCCCGGTGGACGCCA              CGGCCC ATGCG GGGCCG              TCTTCCACGCGCGTT  66 53
    Ajs_1828 1905167 .. 1905201 +  -5.7  -3.41051   GGAAGCGGGTCACCA    GTTCGCGGAAGGACTC GAAC GAGTCCTTG-GCGGCC     TTCTGGTCGCGCTCC  53 332
    Ajs_1830 1909326 .. 1909340 +  -5.6  -2.79796   TGAAAAAAGCCCGCG               CGGCAC CAT GTGCGG               TCTGCTCAGGTGCCG  46 57
        clpS NONE
    Ajs_1832 1912175 .. 1912194 +   -15  -5.60993   CCGCGTTTTAACAAA            CCCGCAGC CCGC GCTGCGGG             TTTTTTTATGGGCGC 100 52
    Ajs_1833 NONE
    Ajs_1834 1914144 .. 1914175 +    -8  -2.61912   GAGCGCATTGCCGGG      GTGGCGCCTTGATCA GCC TGG-CAGGGCGCGAC      ATTCTGCATGCCTGG  51 14
    Ajs_1835 NONE
    Ajs_1836 1916387 .. 1916432 + -11.7  -2.71681   GGCGGATGCCAGGCC CGCGC-CGCCGTCGATCTGCCG TGC CAGCAGGCCGACGGCCAGGGCG TAGTTCACCGAGTTG  62 340
        sbcB NONE
    Ajs_1839 1919986 .. 1920016 +  -5.9  -2.54896   ATCGTGCGGTCCCAA       AGCGCCGCCTGGC CGCGT GCCGTGCAGCGCA       TAGCTTGCATAGGAG  46 45
    Ajs_1840 1922031 .. 1922051 + -11.2  -3.63895   GCGCGCGCAGTCGTG            TCGCTCCT GAAAA AGGAGCGA            TTTGCGCTGGTTGGG  73 16
    Ajs_1846 1927934 .. 1927970 +  -4.2   -5.2853   CCCTGACCGCCCTCA    GTGGTCCGTCCTCGCC TGATC GGCGGGGGCATCTCAC    TTTTCTTTTTCAGTC  88 7
    Ajs_1847 NONE
    Ajs_1848 NONE
    Ajs_1849 1934315 .. 1934325 +  -6.8  -4.36914   CCGCTCGCTGATCGC                 GGGA CCT TCCC                 TTTTCTCCAACCCCA  73 52
    Ajs_1850 1934745 .. 1934773 +   -11  -3.16288   TAATACGAAGCCTGG       CTGGGGGGATCGC CCTC GCGA-CGCCCCAG        TGTTGATCCACTTTC  67 38
    Ajs_1853 1939123 .. 1939139 +  -9.3  -3.18681   AATGGCGGTCGGCGC              GGCCGGC TCA GACGGCC              TTGGTGAGCTTGCGC  61 144
    Ajs_1860 NONE
    Ajs_1861 NONE
    Ajs_1862 1948614 .. 1948628 +  -3.6  -3.39162   GACGAGCTAGTGTCG               TGAGTT AAA AATTCA               TTGAATTATTTTCTG  46 31
    Ajs_1863 NONE
    Ajs_1864 NONE
    Ajs_1865 1951797 .. 1951831 +  -2.6  -3.53012   ACCCCATGAAGGCCG     CCGACATCGGTGCACG ATG CGACCGCCGATGGTGC     TTTGGCAGCGCGCCG  47 32
    Ajs_1866 1952315 .. 1952331 + -13.7  -3.13164   GCGCGCGACGCTTGG              CGGCCTG GAA CAGGCCG              TTGAGTGCTTCGAGG  73 113
    Ajs_1874 NONE
    Ajs_1875 1960183 .. 1960193 +  -4.6  -2.70932   GCCTGAGCCAAATCT                 CGGG TAC CCTG                 TGATTGGCAACCGGC  44 52
    Ajs_1876 1961332 .. 1961344 +  -3.3  -2.80071   AACCGATTCCGGGTA                CGGGG TAG TCTCG                GTTTCCGTGCAATTT  40 322
    Ajs_1877 1963155 .. 1963167 +  -3.3  -3.66288   CTCCAGCAACTTCTT                GATGG CAT CCACC                TTGTGTTCCGGCATC  53 509
    Ajs_1879 1967191 .. 1967211 +   -14  -3.28001   TACGCAGCACTTGAG            CGAGGCGG CGAGT CCGCCTCG            TTGCGTTTCAGGATG  77 365
    Ajs_1882 1970138 .. 1970148 +  -8.2  -3.14132   CTCCCTGTTGCGTCA                 GGCG TCG CGCC                 TTGATGGCGCGGGCA  56 229
    Ajs_1887 1973829 .. 1973840 +  -2.2  -3.99405   AAAAAAGGATTATGA                GCTA AAAC TGGC                 TTTATCCTGGCTTGC  57 115
    Ajs_1892 1981701 .. 1981739 +  -5.3  -3.39895   GAAGTAGGAGCGACC GGCGC-GGC--CAGGGCC GGGGCA GGCCCTGTCGCCAGCGCG  TTACTTGGTGCCGAA  53 70
    Ajs_1896 1986994 .. 1987032 +  -8.1  -4.64657   TGGCCGGGCGCGGTG  CCGTTTTTGCCGTTGCCC TCGG GGGCGTTGGC-AGAGCGG   TTTTTCAGGATTTCG  81 459
    Ajs_1898 1989121 .. 1989135 +  -2.8  -2.70932   TTGAGCACCGACACC               CTATGA AAA TCCTAG               TCATTGGCGGCGGCG  40 45
    Ajs_1899 NONE
    Ajs_1900 1991444 .. 1991476 +    -2  -4.84527   CTATAATTTCAATAG     C-TGCCT-GCGCTTGA TCA TCAAGCGCCAGACCCG     TTTTTGATATCTGAA  74 59
    Ajs_1901 NONE
    Ajs_1902 1992923 .. 1992937 +  -4.2  -2.78679   TCGCGCTTGTTGGTC               GGGC GCTGGAG GCCC               ATTTGACTCAAGAAC  42 60
    Ajs_1903 1993965 .. 1993993 +  -7.4  -3.39327   GGCGCGAGATGCCGG       CGAGCATGCGCAT GGCA AAGCGCG-GCTCG        TTCTCGATCTCGCGC  59 424
    Ajs_1913 2003657 .. 2003688 +  -8.5   -2.8294   ACGATGGTGTGACGG      GCGCCGGCCGCCG GTATGG CGGCGGGGAGCGC       TGGTTCTGAGGCATC  55 29
    Ajs_1914 2005223 .. 2005235 +  -5.5  -3.62591   GCTGTTGTGAGTTGA                GGTCA AAT TGGCC                TTTGGCGCTTGTGGG  57 31
    Ajs_1916 2008138 .. 2008161 +   -11  -2.75528   TGGGCCGTTGCAATC          GCTGCGCAGA CGCG TCTGGGCAGC           TCGTGTCTTCGCACT  63 94
    Ajs_1921 2013362 .. 2013375 +  -4.5  -2.90723   GCAGCCGCAAGTCGG               TGGCT TGAG GGCCA                TGTCGTTGAAGGTGC  44 18
    Ajs_1922 NONE
    Ajs_1923 2014272 .. 2014286 +  -7.1  -3.00525   CCATTGATGCTGCGT               CAGGG TATTT CCCTG               TGTCGTTTCGCAGAA  51 34
    Ajs_1925 2016767 .. 2016785 +   -11   -4.4267   CGTTTGAGTCGAAAA             GGGGCTTC ATC GAAGCTCC             TTTTCAGTTTTCAGC  95 74
    Ajs_1927 2018578 .. 2018598 +  -2.4  -2.78384   GCGCGGTGATCGCTG            AGGCAGGC CTAAA GCCTGGCA            TCTGATGGCCGCAGC  39 25
    Ajs_1928 NONE
    Ajs_1929 2020026 .. 2020054 + -17.5  -4.07687   TACGTCGCCACACAT        GAAAACGGCTCGC AAC GCGAGCCGTTGTC        TTTTCGCGCCCCGAT 100 50
    Ajs_1942 2035503 .. 2035527 +  -4.9  -3.15544   GTTGACGTAGATGTC          GTGCACGCC GAAGCCG GGCTTGCGC          TTGGTGGCGGTGCGG  47 243
    Ajs_1944 2038388 .. 2038412 +  -6.9  -3.05384   CGCCAGGCCGTACAG          CGCCGCGCCCC AGC GGTGCCCGTCG          TTGGATGCCACGCCG  51 434
    Ajs_1946 2040094 .. 2040125 +  -6.7  -3.13403   TTGAAGCGAAATTGC      CCT-CTAGCGCTTT CCTGA AAAGCGCTAGCAGC      TATTAATAGAGAAGC  53 68
    Ajs_1951 2047332 .. 2047343 +  -7.2  -3.14931   GTCGCCCCGCGCCAC                GGGC GCAG GCCC                 TTCGTAGGCGGTCAC  52 428
    Ajs_1954 2049859 .. 2049888 +  -7.2  -3.19192   AGCGGCAGATACAAA       GCTGAACGAAGCC TGAGC GGCGTC-TTCAGC       TTGGCTTCAGTGGCA  56 10
    Ajs_1955 2051694 .. 2051730 +  -2.1  -4.17316   GCATCCAAATAAAAA    CAGCCGCCAGCGCTT ATCTATA AAGCGCGAGCAGCTA    TTGTTTTAAGAGCGT  59 29
    Ajs_1959 2056228 .. 2056284 +   -10  -2.90723   CGCCGTACTTGCGCA TGAGCCGCGCGCGGTAGATC-TCCACC GTGC GGTGGCTGATGTCCAGCGCGCGGCCGA TCTCCTTGGAGGTCA  59 204
    Ajs_1961 NONE
    Ajs_1962 2058208 .. 2058227 +   -15  -5.69068   GGGCCAAAACTACGG            GCCGGGTG GGAT CACCCGGC             TTTTTTGTCTTTTTG 100 87
    Ajs_1963 NONE
    Ajs_1964 NONE
    Ajs_1965 NONE
    Ajs_1966 NONE
    Ajs_1967 2066226 .. 2066252 +  -4.3  -3.80733   AAACGATAGTCAACG        TGGCCCCACGGG CCGG CCCGAGCG-CCA         TTCTTGTGGAATCAG  56 95
        alaS 2082176 .. 2082201 +  -3.2  -3.09987   AGGCGCCATTGTTGA         CCAGATCTTC ATAGAA GCAGACCTGG          TTGCGTCCATGTTCC  44 229
    Ajs_1985 2087848 .. 2087858 +  -2.4  -2.67171   TCCACTTCAACCCTA                 GGAG TTC CGCC                 ATGTTTGCTACCCTG  38 51
    Ajs_1986 2088304 .. 2088348 + -16.5  -4.08767   AGCTGCTTGCGCTTG ATGGATGGGCCTTGGAGGTCG ATA TGACCTGCAAGGCCCATCAAC TTTTGGAACGCTGCC 100 57
    Ajs_1996 NONE
    Ajs_1997 NONE
    Ajs_1998 2100882 .. 2100899 +  -2.6  -3.61398   GCTGTTCAACCCGGC             GCCGGT GACCTG ACCTGC              TTGTTCGACCCAACC  49 13
    Ajs_1999 2102126 .. 2102179 + -15.3  -4.28994   CGCACAAACGCACCG CATCAACGGCAACAGCCGCCACCCCC GTG GGGGTTGGCGGCTGTT-TCGCTTCTG TTTTGATAGCTGCTG 100 149
    Ajs_2002 2104867 .. 2104886 +  -2.1  -3.97388   GTTGAATAACAGGCC            TCGCGTGG TTCAT CC-CGTGA            TTTCTGGTCCGCTAT  57 380
    Ajs_2010 2113938 .. 2113964 +  -2.3  -4.09685   GTGCCCTGGCTGGAT        GAGGTAGCGCTA TTGC TACCGCTG-CTC         TTTTGCCCGGTGCCG  58 138
    Ajs_2012 2114791 .. 2114826 +   -11  -5.71712   CAACGGCCGCGCCCA    CGGCGGCCCT-CGCCAC AGC GGGGCGCAGGCCCCCCG    TTTTTTTATATGCGC 100 41
    Ajs_2014 NONE
    Ajs_2015 NONE
        prpE 2119448 .. 2119480 + -20.7   -5.5604   GCTCTCTATTTGATA      GCTTCCAGCGCTTGT TGG ACGGGCGCTGGAAGC      TTTTTTATTGCTTGA 100 54
    Ajs_2021 2128288 .. 2128305 +  -6.9  -2.70932   AAGCCCGGCGCCCAG             GTGGGCG GCGC CGCGCAC              TGATTGCGGGCAGCG  49 5
    Ajs_2022 2129669 .. 2129704 +  -9.7  -3.74693   GCGCCTGCGCGAGGC    CGTGGACG-ACCGTTC CGACT GAGCGGTCCGCCCGCG    TTTCCTGCGATCACG  71 4
    Ajs_2023 NONE
    Ajs_2024 2132875 .. 2132892 +  -2.6  -3.53012   GGGCGTCGAGTTGCT             GCCCTG ACCCTG CAGAGC              TTTGCGGGACGGCCC  47 19
    Ajs_2025 2133870 .. 2133924 + -19.3  -3.65812   CACGCCGAAGAACGC GGCGCGCGT-GGCCTGGGCCACGCTGC GGC GC-GCATGGTCCAAGTCGGCGCGCGCC TTGTCTTCCAGCGAC 100 388
    Ajs_2030 2137568 .. 2137589 + -18.7  -3.33151   GCTATCCTCCCGGGC           CCGCGCCGC AACA GCGGCGCGG            TGTTACTTTGGAGGA  93 133
    Ajs_2031 2137872 .. 2137896 +  -4.1  -3.02144   TGCACCTTTCACCCA          GCCCGCATGTC CCT GACACCCGCGC          TCTTGCCGCAACTGC  45 45
    Ajs_2032 2138407 .. 2138439 +  -5.4  -4.08216   TTCAAGCGCGGCCGC     GTGCGGCCCGAGCGC TCGC GCGCGCCTGCCG-AC      TTTTGACGGAAATCG  63 150
    Ajs_2033 2140714 .. 2140741 +    -9  -2.85668   TCCGCCGCACCCTTG        CGCGCAACCGCG TGGG CGTCGTGGCGCG         TGTGCTCTGGCCATA  58 193
    Ajs_2034 2141813 .. 2141827 +  -5.6  -2.78384   GCAGCGGGGTGTGGA               TGGGGC CCT GCGCCA               TCTGATGCCCACAGC  46 6
    Ajs_2035 2143167 .. 2143189 +  -9.1  -2.70932   TGGTGCCGTTGTGCG           GCGCAGCAG GTTGG CTGCTGGGC           TGATTACAGAAGGAA  57 0
    Ajs_2037 2145148 .. 2145205 +  -8.9  -2.71731   CCAGATGCACGGCGC GCGGCACCGCATAGCG-CGGGAAGCCGG CCG CCAGCTTCTCGATGCGCGCCAGTGCCGC TCGTTGGGCGCTGGG  52 157
    Ajs_2040 NONE
    Ajs_2041 NONE
    Ajs_2042 NONE
    Ajs_2043 NONE
    Ajs_2044 2155158 .. 2155180 + -14.9  -5.67967   CTGAAAAACAAGAGA           GCCCTGGTC CATGC GACCAGGGC           TTTTTTTATGGTCAT 100 72
    Ajs_2045 NONE
    Ajs_2046 2157611 .. 2157622 +  -3.6  -3.75153   TCACTCTGCGCAACA                GGCC GCAG GGTC                 TTTGGGTTGACGGCA  54 50
    Ajs_2047 2158043 .. 2158062 + -11.4  -3.00353   GCAAGAGCGATGCCG            GCGCAGGC ACCG GTCTGCGC             TAGTTTGCTCCTTAT  66 3
    Ajs_2054 2165544 .. 2165560 + -10.8  -4.11484   GCCAGACACAAAAAA              GCCCGG CATTA CCGGGC              TTTTGCAGGCTTGGC  84 167
    Ajs_2056 2166767 .. 2166777 +  -8.2   -3.5332   CTGATTGCGTTGGCG                 CGCG AAC CGCG                 TTAGTTTGGCGGTTT  63 11
    Ajs_2057 2167350 .. 2167394 + -11.4  -3.48292   GTCGCTGATCGTGCA GGGCTG-GGCGCCCTGCGGGCA CAA TCCCCGCATGA-GCCACAGCCC TCTTTCCTCCTCCAT  71 33
    Ajs_2058 2168295 .. 2168313 +  -5.9  -3.75024   CGCCAGCGTCCCCAG             CGTGGCG GGCAG CGCCAGG             TTCTTGATCATCGCC  59 286
    Ajs_2060 2170698 .. 2170727 +  -9.9  -3.53012   TTTCCGTAACCTCCA       GCGTGAGCAGCGCC GCG GGCGC-GCCCGTGC       TTTGCAGCGCCGCGC  67 401
    Ajs_2062 2174388 .. 2174410 +  -3.4  -3.21218   GCAAATGCAACTGCT           GATATATTGC ACT GCAACATAAC           TTGGTCCTGCCCCAT  44 159
    Ajs_2063 NONE
    Ajs_2064 2176556 .. 2176571 +  -6.8   -2.5511   ACATCTTGGTTTGCA              CCGCGCC CGT GGC-CGG              ATTGGTGATGTCGTA  47 188
    Ajs_2066 NONE
        dapD NONE
    Ajs_2068 NONE
    Ajs_2069 NONE
    Ajs_2070 2183553 .. 2183596 +  -2.3  -3.05775   TCCCACTCGCTCCCG CAAAGTGACGGCGC-CGGCCC GTCC GGCCCCCGCCCCGTC-CATTG GTTTTGACCCATGAT  41 18
    Ajs_2071 2185967 .. 2185986 + -12.2  -4.35524   GGTGGAGACAAAAAA            GGAACGTG CTGC CACGTTCC             TTTTGCATTTCAAGG  91 415
    Ajs_2075 2190507 .. 2190523 + -12.3  -2.91274   CGGATTGGCCACCGT              GCACCAG GCG CTGGTGC              TGTCGTTGCCGTACA  67 41
    Ajs_2078 2192764 .. 2192799 +  -6.2   -5.5112   TCACTATCATAAAAA    TAGCTGCTAGCGCTT TCCCCAT AAGCGCT-GCAGCCG    TTTTTTATTCATACA 100 42
    Ajs_2079 2193810 .. 2193825 +  -3.2  -3.28712   CAGGGGCACGAGTGC              CATGGG TATG CCGATG               TTCTGGGCGCGCAGC  46 468
    Ajs_2089 2211693 .. 2211704 +  -5.8  -2.72344   CCGCTGCTGGCATGA                CCTG TGTC CAGG                 TCCTTGAGCGTGACC  45 405
    Ajs_2091 2213758 .. 2213779 +  -6.5  -2.68487   CGCCAACTGAGACCG           GGGCCGGCAC CCT GT-CCGGCAC           TGCTGTAGTAATTGC  49 31
    Ajs_2092 2214683 .. 2214701 +  -8.8  -2.78935   CCATCGGCCGCGCCG             CCGTCGTG CGC CATGGCGG             TGTAGTAGCCCATGT  52 342
    Ajs_2095 2217005 .. 2217021 + -13.7  -5.14563   CAAAAGCATAAAAAA              GGCAGCC AGA GGCTGCC              TTTTTTGCTACGGCC 100 121
    Ajs_2101 2223557 .. 2223574 +  -2.6  -4.17023   AGCCGGCTTCGGCGG             CGGTGG TGGCCT CCACGG              TTTTCAGGTCCTTGG  62 175
    Ajs_2106 2228047 .. 2228100 +   -13  -2.54896   CGATCGGGGCGCGGG CGGCGACGAGCGCGGCCAGCTCCAGC GCCC GCTGGCGCAGGGCGT-C-CGGCGCCG TCACTTCGCTGACCA  67 218
    Ajs_2113 2233265 .. 2233289 + -22.9  -2.90511   CCCGAACGGGGGAAG          CGGCCGCGTCC GAG GGACGCGGCCG          TCGTGTTTGTCGATG 100 48
    Ajs_2114 2233989 .. 2234003 + -12.8  -2.52464   GAGAACCGCCTGACC               GCGCCG CTG CGGCGC               TGAGTTCAGCCGCCG  67 8
    Ajs_2116 2235760 .. 2235776 +  -5.7  -3.07816   AGCTGCTTCCCCGCA              GCGATGG ATA CCGCCGC              TTCACTGGGTCACCA  49 462
    Ajs_2120 2239643 .. 2239657 +  -9.2  -2.75481   CCACAAGTAATGCGC               CGCTCG CTT CGGGCG               TGCTTCAGGTTCGGG  55 508
    Ajs_2126 NONE
    Ajs_2127 2252009 .. 2252042 +  -3.1  -5.07011   GCTCCGTTTTTAATA     GCTGCCT-GCGCAT ACCAGAC AAGCGCCAGGCAGA     TTTTTCATTTGTATC  78 43
    Ajs_2128 2252937 .. 2252956 +    -7  -3.53091   GAGGCACCCCTGACC            CGAGTGCC GGTG GGCGCGCG             TTTGCGCCAACGGCT  57 44
    Ajs_2129 2255064 .. 2255081 +  -4.7  -3.96327   GTTCGCGCTTGTCTG             TCGGGCG TTTG CGCCTGC              TTTCTACTGGAAAAT  60 50
    Ajs_2130 2255814 .. 2255858 +  -4.8  -3.01712   ATCATTTTCTAAAAG CGAGGGAT-GC-TCGGCGCGGC ATT GCCGCGCCACTGCCGTCCACCG TCTTACAGGGACAGC  47 29
    Ajs_2132 2257623 .. 2257633 +  -5.4  -2.52464   CCGTGCGGCCAAGGC                 GATC CGC GATC                 TGCGTTAAAAACGGG  43 7
    Ajs_2147 2269810 .. 2269826 + -13.7  -3.13164   GCGCGCGACGCTTGG              CGGCCTG GAA CAGGCCG              TTGAGTGCTTCGAGG  73 241
    Ajs_2151 2275556 .. 2275571 + -11.8  -6.09133   TCACGTGCACAAAAA              CCGCCC TCCC GGGCGG               TTTTTTTTTGGCATA 100 44
    Ajs_2152 NONE
    Ajs_2153 NONE
    Ajs_2154 2278934 .. 2278962 +  -3.2  -3.17219   CAAATCTGCGATTCG       TGGCGTCAAACCG TGGT CGGTTTCAT-CCA        TTGGTGCCAGTTATC  44 116
    Ajs_2156 2283077 .. 2283093 +  -6.5  -3.76839   CAGATTTGACAATAA              CTCGCCA AGC TGTCGAG              TTTCGCTTCACGTTC  62 52
    Ajs_2157 2284267 .. 2284281 +  -2.1  -4.08216   TGGCAATCCTGTGAG               TTGGT ACTGC ACCGA               TTTTAAAGGGGATGG  57 86
    Ajs_2158 2284967 .. 2285016 +  -2.5  -2.62184   AAGCAGGACTAAGAG TCCTTCAAGCTGGCACCCGCCGC CCGG GCGGCGGGTGCGGAGGAGCACGA TGATGTGGAACCACA  38 29
    Ajs_2159 NONE
    Ajs_2160 NONE
    Ajs_2161 NONE
    Ajs_2162 NONE
    Ajs_2163 NONE
    Ajs_2164 NONE
    Ajs_2165 2295229 .. 2295254 + -11.1   -3.2285   ACCCCGTTTCATCGT         CG-CGAGCGGCA GCT TGCCGCCCGGCG         TTCCCTTCGATTTCT  67 441
    Ajs_2168 2296781 .. 2296816 + -11.8  -3.08996   ACAGGCGATGACTAT    GATCGTCGGGCCACGT GCTC ACGTGGCCGGATGGCC     TGTTCAGTAACAGTG  68 119
    Ajs_2170 NONE
    Ajs_2171 NONE
    Ajs_2172 NONE
    Ajs_2173 2302470 .. 2302491 +  -9.5  -3.05384   CGTGACCGTGTTCGA           CGCTCTTGGC AAT GCCAA-AGCG           TTCGATCCAAAGGGG  60 152
    Ajs_2174 2302825 .. 2302843 +  -6.6   -3.0806   CGCCTGATCGTCGTC             CTCGGCCC CAA GGGCTGAA             TCTTCGCGCTTTGCG  51 70
    Ajs_2178 2307328 .. 2307338 +  -8.2  -3.61715   AGTTAAGGAGCATGT                 CGCC AAA GGCG                 TTGTTCAAACCGATC  62 230
    Ajs_2195 NONE
    Ajs_2196 NONE
    Ajs_2197 NONE
    Ajs_2198 NONE
    Ajs_2199 2329099 .. 2329115 + -13.7  -3.13164   GCGCGCGACGCTTGG              CGGCCTG GAA CAGGCCG              TTGAGTGCTTCGAGG  73 145
    Ajs_2201 NONE
    Ajs_2202 NONE
    Ajs_2203 NONE
    Ajs_2204 2339775 .. 2339789 +  -3.5  -3.32844   GAACGCATCGACGCG               GCCTT CTTCA AGGGC               TTGTGACATGGAGAA  46 5
    Ajs_2205 2340796 .. 2340831 +  -3.8  -4.68593   TTCCGGCCAGACATC    GAACGCGTCGTCATCG CTTT CGAATGCGGTGCGCTC     TTTTTCCGTCATGAG  73 263
    Ajs_2214 NONE
    Ajs_2215 NONE
    Ajs_2216 NONE
    Ajs_2217 NONE
    Ajs_2218 2354207 .. 2354228 + -12.3  -3.17075   CAAGCGTATCAAGTT           GCGCGCCCTC GTA GAGGGC-CGC           TTCCATTGACGCCAG  69 400
    Ajs_2242 2376648 .. 2376681 +  -4.5  -5.06414   GTTGATGGTGTAGCC     CA-CGCCGGCCCCG CCACCCT TGGGCCCGGTGCTG     TTTTTCTTGCGGGCG  83 319
    Ajs_2244 NONE
    Ajs_2245 NONE
    Ajs_2246 2381500 .. 2381523 + -10.2   -5.0133   CAGCTCAACACCTAC          GCCTGACGCGC ACG GCGCG-CTGGC          TTTTTTCGGCGGCTC 100 20
    Ajs_2251 NONE
    Ajs_2252 NONE
    Ajs_2253 2389629 .. 2389646 +  -9.1  -3.33696   CAGTCACAGCCATGA             GGCGGCGG CGA CCG-CGCC             TTCATTGGCCAAGGG  63 201
    Ajs_2255 2391891 .. 2391922 +  -8.7  -3.72576   AAACTTTCGGCCCCT     GCCGAGCGCAGCAGG GCAG CC-GCCGCG-TCGGC      TTTCATCGCGAGGGC  69 168
    Ajs_2259 NONE
    Ajs_2260 2395255 .. 2395278 +    -3  -3.16564   CGGGCCACCTGTGCG          CCGCG-CGCCA TGC TGCCGTCGGGG          TTCATGAGCTCGCAC  44 124
    Ajs_2264 2398034 .. 2398058 +  -2.7  -3.10474   CGGTTTTCGCGTGCT          GGTACACGC GTAAACG GCGCGCACC          TCTTCCCCTCTTCTA  41 13
    Ajs_2265 NONE
    Ajs_2266 2399090 .. 2399126 +  -2.2  -3.28712   CAAAAACACCGTCTG   CC-TGTGG-TTCGACGGC ACT GCCGAAGAAGCCGCGCGG   TTCTACGCGAAAACC  45 89
    Ajs_2267 2399700 .. 2399733 + -10.1  -3.60296   GTTGGCGCATGCCCG     GGCCCTCGGCGCCCAG CAC CAGGGCGACC-GGGCC     TTTCAGGTCCACCTG  67 180
    Ajs_2269 2401816 .. 2401828 +  -2.7  -3.33696   CTTGCTGCGCATCGA                TTTCA AGA TGGAA                TTCATTGAAAACCAG  45 80
    Ajs_2271 2403251 .. 2403263 + -10.5   -3.2614   GGACAACGTGTGGCC                CGCGC TGC GCGCG                TTGCTGTAAACCATC  66 4
    Ajs_2275 NONE
    Ajs_2276 NONE
    Ajs_2277 2409563 .. 2409600 +  -3.5  -4.96848   ATCGCTCCTGAAAAA   ATAGCTGCTAGCGCTT ACCTAAC AAGCGCTA-CAGCCAA   TTTTTCTCTCAACAA  78 30
    Ajs_2285 NONE
    Ajs_2286 2421257 .. 2421289 +  -8.3  -2.52543   CGCCGGGCGCGGGCG      CGAAGCCGGGGTACG GGG CGTAGCTCGACTGCG      TCCATTCCCAGACCT  51 273
    Ajs_2291 2426146 .. 2426160 +  -5.7  -3.01712   TGGCGGCCAGATCGG               TCCAG CTCAT CTGGA               TGTTGCGGAACACAC  49 128
    Ajs_2292 2430187 .. 2430202 +  -3.2  -4.07568   GCCGGCAGCGCGTGT              TGGTGG GAGC CCGCTA               TTTTAGCCCGCGGCA  58 4
    Ajs_2293 NONE
    Ajs_2294 2433852 .. 2433869 +  -4.9  -3.21276   AAGGGCGCTACAGCC             TGATTGA GCGC TCAATCG              TCTTCTACCGCACCA  48 73
    Ajs_2296 2435210 .. 2435237 + -14.2   -4.7254   TGAGGAGCCATTCAA        GGCCATTCCAGC ATCT GTTGGGATGGCC         TTTTTGCTGGGCGCT 100 308
    Ajs_2298 2437146 .. 2437161 + -11.8  -4.75372   GGCCACTGCTGAACA              GCCCGC TTCG GCGGGC               TTTTTGCTGCCTGCT 100 48
    Ajs_2299 2438220 .. 2438250 + -11.8  -3.84406   CTGGCTGCCGCGGTT       GTCGATCTCGCCCA CCT TGCGCGAGGGCGAC       TTGTTCTCGTCCAGC  79 520
    Ajs_2303 NONE
    Ajs_2304 NONE
        lpxK NONE
    Ajs_2306 NONE
    Ajs_2307 2446146 .. 2446174 +  -6.6  -2.90615   GAGCACCTGTCCCGC        GCTGGCGCGC CGACGGCAA GCGTGCCCGC        TGATTTCAAAACACT  50 92
         adk 2446880 .. 2446904 + -21.5  -2.69151   GCCGCCGGCTCCCGC          CAACGCCCCGC AAC GCGGGGCGTTG          TGCTGTGTGCCCAGG 100 48
    Ajs_2310 2448783 .. 2448794 +  -5.8  -3.08867   GCGCTTGACGTCCTT                GGCA ATCC TGCC                 TGTGTTCCACCTTCA  49 135
    Ajs_2311 2449282 .. 2449296 +  -4.2  -3.14132   ACTTTTCGAAGGCGT               CGCG GCCGCAG CGCG               TTCATCGCAGGCCCG  47 71
    Ajs_2312 2449956 .. 2449975 +  -4.2  -3.86776   CCCGGGAAGGCCATA            CGGGCCGCT GCC AG-GGCCGG            TTTGGTGATTGGTTG  58 123
    Ajs_2315 2457202 .. 2457235 +  -4.4  -3.01712   CTCCAGCGCCTCGCG     CTCGGTGCGCGTGCG GTTGA CGGGTGCGC-CCGCG     TCTTCCCAGCCCAGC  45 248
    Ajs_2322 2464360 .. 2464379 +  -7.8  -2.73364   CGACGAGCGGCGTGC            ACAGCACC TCGG GGTGCTGG             TAGTTGGGATCCACG  51 336
    Ajs_2324 2465307 .. 2465326 + -13.6  -4.55295   GTCAGACGCAAAAAA            GGCCGTGA ATCC TCACGGCC             TTTCTTTGTCAGCGG 100 81
    Ajs_2326 2468215 .. 2468266 + -10.1  -4.34402   GCTACACTGCGGCCT GCGCGTGCTGGC-GCCCCTGC-CCTG GTA CAGGCGCACGGGAAGCC-GCGAGCGC TTTTCGTCTCCGCCC  85 203
    Ajs_2327 2469860 .. 2469893 +  -9.3  -3.30124   GGTCTTCTCGCCGAT     GCGCCAGCCCGCCGG CATG CCCGCGCGCAGCCGC      TTGTCGCCCGTGAGG  61 215
    Ajs_2329 2471567 .. 2471577 +  -6.8  -3.35679   AACCGCATCAAAAAA                 GCCT TTC AGGC                 TTATAGATCAAGCGC  55 58
    Ajs_2330 2472475 .. 2472488 +  -5.2  -3.85698   CCAGGAAATCCTGCG               CGCC ATCCCC GGCG                TTTCTGCCCACAACG  60 470
    Ajs_2332 NONE
    Ajs_2333 NONE
    Ajs_2340 2483439 .. 2483464 + -18.3  -5.36441   CCCCGCCAAACAAAA         CCCGCCTCCGGC CAT GCCGG-GGCGGG         TTTTTTCTATAAAAA 100 53
    Ajs_2346 2490453 .. 2490489 +  -4.3  -4.53398   TTTTTGCAGTGTTTT    TGGCCTCCAGCGCTTAT CCA ACAAGCGCTAGCAGCTA    TTGTTTTTGATATTC  72 457
    Ajs_2351 2494337 .. 2494351 +  -2.1  -3.87149   TCCCCTTCTTTTTTT              GCG-TC GCCT GAGCGC               TTTGCGTTTCATAGG  54 192
    Ajs_2352 2495480 .. 2495500 +  -6.7  -3.16564   CGCTTCGAAGGCCAC            GCCGCCGGC CGT GCTGATGGC            TTCATCCAATGGGCG  52 288
    Ajs_2357 2503784 .. 2503810 + -17.3  -3.03124   GGCCTGATTCCCTTC         TTGCCGGCCGC CCTCC GCGGCCGGCAG         TCTTCCGAGGTGCGC  88 34
         rho 2505304 .. 2505323 + -12.1  -4.72272   CCACCGCTTTGCCCA            GCCCCGC CATCGT GCGGGGC             TTTTTCATGGCCGCC 100 52
    Ajs_2359 NONE
    Ajs_2360 NONE
    Ajs_2361 NONE
    Ajs_2362 2512055 .. 2512065 +  -6.8  -3.35015   GCATGGCCTAGCACC                 GCTG AAT CAGC                 TTGTGCGATAATTGC  55 30
    Ajs_2363 2512474 .. 2512498 + -12.8   -5.4505   CACCTGCACACACTA          GGCAGCCCGG CTTCT CCGCGCTGCC          TTTTTTATTGCGCAC 100 97
    Ajs_2364 NONE
    Ajs_2365 2515925 .. 2515943 +    -3  -3.62522   GATGCTGCCTCCGGG             TGGCGTGT AGC GCACGGCG             TTGTTGACCAGGTTG  53 324
    Ajs_2373 NONE
    Ajs_2374 2524172 .. 2524188 +  -2.1  -4.36914   TCGTGGGCTGAGACG              TGGCCGC CCT GCAGTCG              TTTTCTCCCCGGCGC  62 30
    Ajs_2375 2525757 .. 2525777 +  -9.9  -4.65895   CGCCGCAACATAAAA            CGATATAAA CTG TTTATATCG            TTTTTCAATCAGGCA  95 49
    Ajs_2376 2526639 .. 2526653 +  -5.6  -4.57073   ATCGAGCCACACCGC               CATGCG TGC CGCCTG               TTTTTCGCCACGCTG  74 431
    Ajs_2380 2532531 .. 2532564 + -12.5  -3.68366   GGCGCCCAATTCGGC     CTCTGCG-TCGCGGAT GGC ATCCGCGAGCACAGGG     TTGGTTTTCCAGTCC  77 234
    Ajs_2385 NONE
    Ajs_2386 2539105 .. 2539131 +    -8  -2.52543   ACGCCGAATACGGCT         TGGCGCGTGG CAGGAAC TTACGCGCCA         TGGCTTCGAAGGGCT  49 421
    Ajs_2402 2556873 .. 2556911 + -16.1  -2.57931   CGGTGGGCAACGGCA  TGAGTG-CGAGTGCGCGG ATAC CCACGCGCTCGGCACTCA   GTTCTGCCACGTCGC  77 169
    Ajs_2404 2557802 .. 2557819 + -11.3  -5.44119   CCAGGCGAACAAAGA             CCGGCAT GCGC ATGCCGG              TTTTTTTCGCCTGCA 100 68
    Ajs_2405 2558263 .. 2558275 +  -4.8  -5.09426   CTGCATAAATAGACC                GCCT ATTCA AGGC                TTTTTTGGCCTTCCG  83 70
    Ajs_2406 NONE
    Ajs_2407 NONE
    Ajs_2408 NONE
    Ajs_2409 2560693 .. 2560708 +  -7.5   -5.7946   ACACCCATGAAAAAA              CCGGC CCACGC GCCGG               TTTTTTTGTTGGGAC 100 134
    Ajs_2411 2562163 .. 2562181 + -13.1  -4.62069   GCACATGCGTCGCAA             GGCCCCG ATTTC CGGGGCC             TTTTTCACGTCCGCC 100 55
    Ajs_2412 2562980 .. 2562997 +  -2.5  -3.85698   GAACGCCCCCTCGCG             CGGCGGG TCCA CCAGCCA              TTTGTCGGAGGCGCC  54 372
    Ajs_2415 2565254 .. 2565270 +  -2.1  -2.83382   GAGCCGCCATGAACT              GCCCTCG CAC CGAAGAC              CTTTCCGCTTTGATC  40 48
    Ajs_2416 2566230 .. 2566286 +  -8.1  -4.07687   TGAGGCACCCCCTTC GTTGAAGTAGGCAAGGCAGCCACACA TTCCCT TGAGCGGCTGCCTTGA-TGGTTCAAC TTTTCAACGGAGCAT  73 86
    Ajs_2417 NONE
    Ajs_2418 2567832 .. 2567848 +  -2.9  -4.37013   TCATTGAGCAAAAAT              TCGGTGG TGC TTGCCGA              TTTTAGTGATTCATT  64 465
    Ajs_2420 2571676 .. 2571725 + -10.6  -3.28712   ATAGCAATCAATCCG CCAGCGGCCACTCGCCCAGCACCT CGTA AGG-GCCGGGCGAGCCGC-GCAGG TTGTGCAGCAGCACG  66 99
    Ajs_2422 NONE
    Ajs_2423 NONE
    Ajs_2424 2577885 .. 2577906 + -15.9    -5.626   GTCCTGAATGGAAAA           GCCCATCGC AACT GCGATGGGC            TTTTTTTATCAGCTG 100 81
    Ajs_2425 NONE
    Ajs_2426 NONE
    Ajs_2427 2582390 .. 2582418 +  -9.5  -3.53563   CTACTGCGAATGGCT        GGTTGTGGCCGCA AGC TGCCCCCACAGCC        TTTGAAGCGCAGTCT  65 281
    Ajs_2431 NONE
    Ajs_2432 NONE
    Ajs_2433 2591120 .. 2591133 +  -3.7  -3.53343   CACGACATGCCCTGC               GGCGC GCCA GCCCC                TTTCAGGAACGCATT  51 80
    Ajs_2435 NONE
    Ajs_2436 NONE
    Ajs_2437 2593340 .. 2593354 +  -2.8  -3.10409   TCCTGAAAAAATAGC               TGGCAG CGC TTGTCA               TTGGCTGAATTCATC  43 35
    Ajs_2438 2594509 .. 2594521 +  -3.3  -4.74504   GGCACTCGCGGGCGC                CACCG TCA CGGTC                TTTTTCCCTTCGGAT  75 483
    Ajs_2442 2597868 .. 2597882 +    -7  -3.01791   CAGGGGGTAAACGCC               GGCGCC GCT GGCACC               TGTTGGCAGGACAGT  51 48
    Ajs_2443 NONE
    Ajs_2444 2600400 .. 2600410 +  -2.4  -3.89695   TTCTTGGCAAATTCC                 GCTG CCT CCGC                 TTGTATTTCTGCACG  56 130
    Ajs_2451 2607158 .. 2607179 +  -2.9  -3.72009   GTGTTGCTGCCCCGC           TTGCCACGG TTTC CTGTTGCGA            TTTCCCTAATGTTCT  53 208
    Ajs_2464 2623532 .. 2623569 +  -3.4  -3.55444   ACGCTTCCAAAACGA   T-AGCTGCCAGCGCTTG TCAGT CAAGCACTGACAGCACA   TTTGACCCATGACCA  51 43
    Ajs_2465 2624699 .. 2624709 +  -2.4  -3.74251   CGCTGCCTGAAGCCA                 CGGC ACG GCCC                 TTTCATAAAAATGTG  52 31
    Ajs_2466 NONE
    Ajs_2467 NONE
    Ajs_2468 2628863 .. 2628906 +    -3  -3.62597   CGGCCGGTACATGGC CCACACGGCTCCCGCCGCG CCCTGAC TGC-GCACTGGCCGTGTGG TTCTTACAACCTCAA  51 48
        rpsA NONE
    Ajs_2470 2631141 .. 2631173 +    -2  -4.74103   GCAATAAAACCATAG     CTGTTC-A-CGCTTGC TGG GCAGGCGCTAGAGCCG     TTTTTGGCTTGAGGC  72 34
    Ajs_2471 NONE
    Ajs_2472 NONE
    Ajs_2473 2633130 .. 2633149 +  -4.8  -2.52681   CCATAACGCGCTGGA            CGGCAGCG TAAT CGCCGCCA             CTTGCTCGGGTTTTC  43 61
    Ajs_2474 2636138 .. 2636155 +  -2.5  -2.79302   AGCAAGCAGCCGTCC             CGGCCAC ACAA GGAGCCG              TCTGATGGAAATCGT  39 3
    Ajs_2475 NONE
    Ajs_2476 NONE
    Ajs_2477 NONE
    Ajs_2478 NONE
    Ajs_2479 2639407 .. 2639440 +  -4.6  -3.96216   TGCTATTGAAAATAT     AGCTACTAGCACTTG ACCAG CAAGCGCTAG-AGCC     TTATTTCACTCAAAC  60 43
    Ajs_2481 2645344 .. 2645366 +  -3.4  -3.71848   GCCCCGCCTCGGTGG          CGGCGTAGG TCACGT CCT-TGCCG           TTCTTGCTGGAGGCC  53 247
    Ajs_2483 NONE
    Ajs_2484 NONE
    Ajs_2485 2648783 .. 2648837 +  -5.5  -3.07947   CTCCCGCAGCAAATG ACGGCGCGTTG-ACGAGGCCGCCGCC GCTC GGCAGCGCCTCCCTATAATGCGCCGA TGTTCCACGTTCTTG  49 14
    Ajs_2486 2649248 .. 2649284 +  -2.2  -4.42238   TCACTATTAATTTAA    TAGCTGCTAGCGCTTG ATACA TAAGCGCTACAGGCCA    TTTTCATTAAAATCC  65 41
    Ajs_2487 2650454 .. 2650494 +  -5.2   -3.1505   TTGATCGCCATCAGC CGCAGACCCAGCGCCTCGC CATG GCGGTGCGC-GGGCGTGAG  TTGGTGCAGCATGCT  49 252
    Ajs_2494 2658617 .. 2658635 + -14.6  -5.75342   CCTGGATCCCTTCAA             GCCCAGTC CCT GACTGGGC             TTTTTTTTGGGCGGA 100 170
    Ajs_2496 NONE
    Ajs_2497 NONE
    Ajs_2498 2663569 .. 2663588 +  -4.2  -3.53012   CAGGTCCAGCGCGCG            CGG-CGCCT TCC AGGCCACCG            TTTCGGAGAAAAAGC  51 495
    Ajs_2501 NONE
    Ajs_2503 NONE
    Ajs_2504 NONE
    Ajs_2505 2668400 .. 2668438 +  -6.6  -4.96848   TTCGCTTCCAAAAGA   GTAGCTTGTAGCGCTTAC CTA GCAAGCGCTACCGGCCAA   TTTTTATCTAACGCC  86 22
    Ajs_2506 2669205 .. 2669221 +  -6.5  -4.07568   GCCTGTAATGCGGTA              GGGGG CACCCGT CCCCC              TTTTGACCGCAACGA  67 33
    Ajs_2507 2669569 .. 2669613 +  -9.4  -3.63627   GGGCCGCACATTGAT GGCGCAGCGG-TGT-CGGCGC TACCAT GCGCCACACAACCG-TGCGCC TTTGCCATGTCCAGC  68 133
    Ajs_2508 2671617 .. 2671632 +  -6.8   -3.1355   GCTGGCCTGGTAGGG              GCAGCG CGTG CGTTGC               TTCAATATCCATAGC  53 28
    Ajs_2509 2672244 .. 2672291 + -10.2  -3.71672   CCGCGGGGCGTTGCG CGCGCGGCGCTCGTTGCGGCGC AGCT GCTCGGCCTTGCGCGCGGCGCG TTCCTTTTCCTGCAC  70 96
    Ajs_2511 2673438 .. 2673466 +  -4.5  -3.21099   ATGGCCTGATCCGTT       GGCG-CGGGCGCC GGTAA GGC-CCCGTCACC       TTCATGCTGCAAGCC  47 9
    Ajs_2512 2673905 .. 2673923 +  -6.7  -3.61398   AAGGGGATCGCGGGT             GTCGCTG GCCAA CAGTGAC             TTGTTGACCACCCAG  58 251
    Ajs_2514 NONE
    Ajs_2515 NONE
    Ajs_2516 NONE
    Ajs_2517 NONE
    Ajs_2518 2679661 .. 2679702 + -10.8  -3.73647   GGCAGGGGTCTCGAT GCGGTGGCGGGTGCGCAGC GCGGG GCTGCACACCGGC-ACCAC TTCTTCGTGCATCAG  73 447
    Ajs_2520 2682133 .. 2682163 +  -5.5  -3.19705   GAAGGGCTAAATGGG      GCT--CTGCGCTTGT GGG GCAAGCGCGGACAGC      TATCGTTTTTGAGTT  51 44
    Ajs_2544 NONE
    Ajs_2545 2709464 .. 2709477 +  -2.3  -4.58395   GGCTTCACCCAGTCG               GTCGC CGCC GCCAC                TTTTTAGCCGCTAAA  68 5
    Ajs_2549 2714882 .. 2714912 + -11.1  -5.08255   CCATAAACGCGCCAC      CGGCCGCC-CTTCT GCAT GGATGAGGCGGCCG       TTTTGTTTTCAGCGT 100 49
        smpB 2716342 .. 2716352 +  -4.6  -3.14564   GTGGAATAAACGCAG                 CGCC CCC GGTG                 TTCATGCCAGCGTCC  48 58
    Ajs_2553 NONE
    Ajs_2554 NONE
    Ajs_2555 2718211 .. 2718235 +  -6.9  -2.87963   GGCTCCACATCCTCC          ACGCGCGCGGG GTT CCAGCGCGGGC          TGTGGTCCTTGTCCA  50 61
    Ajs_2569 2735254 .. 2735275 + -13.7   -3.1505   GCGCACGCTGCTGCA           GGGC-GGGCG AAA CGCCCTGCCC           TTCGTGGCCCATGAT  73 208
    Ajs_2586 2751850 .. 2751887 +  -2.7  -3.80083   GAACTACAAAAACAA   TA-GCTACTAGCGCTTAT CCT ACGGGCGCTAGAGGCATA   TTTCGCTTCAATTTT  52 23
    Ajs_2587 2753328 .. 2753346 + -14.6  -3.51976   GCGTTGCCAAGCCTC             GCTGGGGT AGC ACCCCAGC             TTCGTTTGGCGCCTT  83 202
    Ajs_2588 2755076 .. 2755091 +  -3.2    -3.767   TGTCTTACAGACGGT              GCGC GGACTGAA GCGC               TTTAATCGCTCCATG  54 123
    Ajs_2589 2755353 .. 2755368 + -11.8  -5.00616   CACTCCTCCCCTCCA              GCCGCC TTCG GGCGGC               TTTTTTGCAGGCCGC 100 50
    Ajs_2594 NONE
    Ajs_2595 NONE
    Ajs_2596 2761775 .. 2761789 +  -2.7  -2.92371   CTCTGGCGGGAACTT               CCTGC ACCGC GCCGG               TATCATTCGCTGCAT  40 73
    Ajs_2597 2762221 .. 2762279 + -10.5  -2.76798   CACTGACGCCCGAAG TGCGTCCGC-A-A-TCGGCTGCATGTCCC CCGAC GGGGCC-GCAGCCGAGTGTCGCGGACGCG GTTGTGTCATGTTTG  60 42
    Ajs_2598 2762650 .. 2762697 +  -2.4  -3.02511   CACCACGGAGGCCGG CCA-TGAGGCGCCCTCCGCTCTC CCT GGCTGCGCTGGCCGCCGCACTGG TGTTGGCCGGCTGCG  41 20
    Ajs_2599 NONE
    Ajs_2600 NONE
    Ajs_2601 NONE
    Ajs_2602 NONE
    Ajs_2603 NONE
    Ajs_2604 2769158 .. 2769169 +  -7.2  -3.53012   ATGCCCTGCGGCTGC                GCCG CGCA CGGC                 TTTGAGAGCACCCCG  60 9
    Ajs_2605 NONE
    Ajs_2606 2771695 .. 2771708 +  -2.3  -3.93695   ATCAGGCGGAATGCC               CCGTC GGAG GACAG                TTTGTCGATCATGCG  56 137
    Ajs_2609 2777568 .. 2777584 + -15.1  -5.08824   TCACGACAACAGAAA              GCCCGGC ACA GCCGGGC              TTTTTTCCATGGCCC 100 46
    Ajs_2610 2779828 .. 2779852 +  -8.6  -5.60689   CACGGCCTCTTAGAA         CCCGC-ATGCT TCCT AGCGTTGCGGG          TTTTTTGTTGTCTCA 100 349
    Ajs_2619 2790894 .. 2790915 +  -7.9  -3.53012   ATCAATGGGAATAGG           TCGCGGCGG CACC TCGCCGGGA            TTTGGCGGGACGGGC  60 326
    Ajs_2625 2798897 .. 2798917 +  -6.1  -3.57263   CTGGGGACTGGAAAA            GTATGCCCG TTA CGGGTATAG            TTTGGAGGTCAAGAT  57 131
    Ajs_2626 NONE
    Ajs_2627 NONE
    Ajs_2628 NONE
    Ajs_2629 NONE
    Ajs_2630 NONE
    Ajs_2631 2802755 .. 2802775 +  -9.7  -3.40403   TCAAATGGATTGGCC            CCGGCAACT GAT GGTTGCTGG            TTGTGGTCCAGCAGC  63 199
    Ajs_2633 2803744 .. 2803756 +  -9.1  -2.71712   TCCGCAAATTGCCAT                CCAGC TTC GCTGG                CTTTGACCCACCGCG  55 381
    Ajs_2636 2805783 .. 2805796 +  -5.2  -4.72986   GCTGATCTAGCCCAA               GGGG CTTCGT CCCC                TTTTTGCTGCGCCTG  78 31
    Ajs_2639 2809535 .. 2809564 + -17.1  -3.52896   AGCCTGAATCCCCAC       GCGGCAGGGGCAG GCAG CAGCCCTTGCCGC        TTCTCTCGCTGCTGC  93 34
    Ajs_2640 2812005 .. 2812030 + -17.5  -3.01712   GGTGGACGCAAAAAT         CCGAGCGCGGC AGTA GCCGCGCCCGG          TGTTCCAAGCCAACA  88 353
    Ajs_2644 2813559 .. 2813584 +   -19  -2.86432   GGCGTGACCGCCGCA         GCGCCCCGCC CACCGC GGCGGGGCGC          TGTGCTGCTGTTCGC  91 34
    Ajs_2650 2819431 .. 2819442 +  -4.4  -3.62597   GTCATACCGGGTAAG                TCTC AATC GAGA                 TTCTTGCGGCGTAGC  53 72
    Ajs_2651 2820485 .. 2820513 +  -2.9  -3.54424   TTTCTGAGACTGCCT        CCATCCGGTCGCG CTG TGTGGCCGGGCGC        TTTCAACCGATGGAG  51 56
    Ajs_2652 NONE
    Ajs_2653 2821925 .. 2821957 +  -6.1   -2.7676   CAAACGCGGCAGCAA      CAGCCCGGCTTTCCA GCA TGGAGGGCCAGGCCA      TGATCTTCGCGTTTC  46 247
    Ajs_2655 NONE
    Ajs_2656 NONE
    Ajs_2657 NONE
    Ajs_2658 2824113 .. 2824149 + -15.2  -2.52464   TCGCCGTGTCGTCGC   GCGTGCAGTGCGGGTGC ATTC GCACC-GCACTTCGCGC    TGCCTTCGGCGCAGC  76 109
    Ajs_2663 2829943 .. 2829957 +  -3.6  -5.63517   ATTTATAAGCTTTTT               CTTATT AAG AGTAAG               TTTTTTATTTCAAAA  93 423
    Ajs_2673 2835737 .. 2835774 +  -6.5  -3.68351   TCACGTGGCGAACAA  GCTGGAGTTGGAGCCTTT TTGAC AAAGGC-CC--CTCCAGC  TTTAACTGCTGACCG  62 104
    Ajs_2674 NONE
    Ajs_2675 NONE
    Ajs_2676 NONE
    Ajs_2677 2839983 .. 2839996 +  -2.3  -2.52464   CCAACCCCACCGACG               CTCGT CATT GCGGG                TCGGTTCCAAGGACC  37 97
    Ajs_2678 NONE
    Ajs_2679 2844246 .. 2844257 +  -5.8  -3.21395   CGACCCACCAGGTGT                GCAG GTGA CTGC                 TGTTGTGGGACGCCT  49 465
    Ajs_2699 2864026 .. 2864038 +  -2.6  -2.91274   CACCCGGACTGCTGC                CGTG ATAGG CGCG                TATCCTTGAGGTAGA  40 95
    Ajs_2700 2864985 .. 2864997 +  -6.9  -3.28791   CATACCTGAACCAAT                TGCGC AAG GCGCG                TTATGAGGCCGAAGT  54 411
    Ajs_2719 2885039 .. 2885063 +  -2.7   -3.7732   CTTGACGGAAAAAAT          CATGGTCATTC CAG GCATGTCCAGG          TTCTTAATATCACCG  56 320
    Ajs_2725 NONE
    Ajs_2726 2891397 .. 2891408 +  -2.2  -3.40307   TGTCGGAGATGTCAT                CTGG CTGT CTAG                 GTTTTGTTGGCTAGG  47 60
    Ajs_2727 2891920 .. 2891941 + -10.8  -4.05788   TGCACGACACCCTCA           TCGCCGCG CTCAGA CGCGGCGG            TTTGCTTTCCGAACC  82 83
    Ajs_2728 2892988 .. 2893011 +    -6  -2.96152   GTGTCCATGACATCC          TGATCGCCGTC ACC GACGGCC-TCA          TACTATTTTGCGTTC  48 347
    Ajs_2730 2893603 .. 2893617 +  -8.5  -2.73875   GCCAGGCTGAGTGCG               GCCGC CCGGT GCGGC               TGATGTTCCAGGACG  54 31
    Ajs_2731 2894464 .. 2894476 +  -6.3  -2.80074   AATGAAATTGACAAG                CTTCT CGG AGAAG                TCATGTTCTCAAAGA  49 351
    Ajs_2733 2895156 .. 2895175 + -13.6  -5.22312   AGGTCGAAAACAAAA            GAGCCACC CGAA GGTGGCTC             TTTTTTCCTCTAAAT 100 194
    Ajs_2740 2903115 .. 2903149 +    -5  -3.28712   GCGCGGGTGTGTTGA    CGCGCCGGGC-TG AAACTTCCCG CAGGTTCGGCGCG     TTGTAGGCCGACCGA  50 73
    Ajs_2741 2903909 .. 2903924 +  -6.8  -4.90266   ACGGCGCATGCCAAA              GGGCTC TTCG GAGTCC               TTTTTCGTTGCTGCG  83 74
    Ajs_2742 NONE
    Ajs_2743 2905823 .. 2905846 + -18.2  -5.60993   TAAAAACAGAAGCAA          CCACCCGGCA GGCC TGCCGGGTGG           TTTTTTTATGCGCCG 100 87
    Ajs_2746 2908502 .. 2908518 +  -2.1  -3.14468   CGCGTTCACCCCTTT              CCCCCCT GCA AGGGGCC              TTCCATGTCCTCAGC  43 80
    Ajs_2747 2909264 .. 2909285 +  -5.1  -3.14344   TCTATGGGCCGCCAT           CGCGGT-GCT GCT GGCCATCGCG           TTCATGCCCGCCCTG  48 311
    Ajs_2748 2910733 .. 2910759 +  -4.4  -2.87051   GCCGGTGGCCCATGC         GATTACAGGC ATTTTTG GCCTGTAGCC         CTTTACTGATAAGCG  44 54
    Ajs_2750 NONE
    Ajs_2751 NONE
    Ajs_2752 2914173 .. 2914200 + -14.2  -4.27796   CACTGCGTGCCGCCT        GCCGGGTACG-GC CAG GCGCGTATCCGGC        TTTTAGGCTTTCTTC 100 74
    Ajs_2756 2917698 .. 2917749 +  -5.7  -4.30987   GCGCAGCGCGGTGTC GTGGC-AGGCGCTGCCGCCCG-TGG CCGA CAATCGGGCAACCGCGCTTTGCCGC TTTGTTGTCAACCCT  71 148
    Ajs_2757 2918771 .. 2918782 +  -5.8  -3.25823   AAGAGTGCGGCGGAA                CTGC GCGA GCAG                 TTCCTGTAAGCCCCG  52 5
    Ajs_2758 2920061 .. 2920076 +  -2.4  -2.87132   ACGTGTTCATCGAAG              CCTCGC TCAA GCAGGG               TGTCTAAACAGGGCG  40 3
        pepN NONE
    Ajs_2760 2923958 .. 2923983 + -15.5  -4.54727   GGCACCACAATGAAA         GCCCCTGATTC GCAA GAGTCAGGGGC          TTTTGCTTTGGCGGA 100 121
    Ajs_2761 2925216 .. 2925233 + -14.1  -4.56597   CAAACAAAAGCAAAA             GGGGCGG TCGC CCGCCCC              TTTTTAGCCCGCCCC 100 77
    Ajs_2763 NONE
    Ajs_2764 2929261 .. 2929298 +    -2  -4.86621   TTTGCTCTTTTTTTT   ATAGCTACCAGCGCT CACCCCACA AGCGCTGG-AGCCAC   TTTTTGCTTAGAACT  74 50
    Ajs_2765 2929763 .. 2929789 +  -4.3  -3.90744   GACCGCGCGTCCCTC        CTCCG-TGCGGC AGGG GCCGCATCGCCG         TTCTTTGGGGGCACG  58 177
    Ajs_2766 NONE
        ribH NONE
    Ajs_2768 2932028 .. 2932072 + -12.3  -3.06183   TCGCATTGTTCGTTC CCT-CAGCGCACCCGCC-GCTG GCCT CAGCCGGCGGGTGC-CTGCACG TTGCATCGCCATGAA  68 64
    Ajs_2769 2933281 .. 2933291 +  -6.8  -3.60098   GACCCCTCCAGGCGT                 GCCA GCA TGGC                 TTTCGAGTGGCCCGT  59 39
    Ajs_2770 NONE
    Ajs_2771 2934535 .. 2934546 +  -5.8  -4.36914   GGCGTCTGCTGGCAT                CGGA CACG TCCG                 TTTTATCCACAGCGC  71 150
    Ajs_2772 NONE
    Ajs_2773 2936045 .. 2936072 +  -5.6  -3.34398   CGCTTGTCCCTCAAC        GGTTTCAAATTG AAAA CACTGTGAAACC         TATTTGAGACAAGCG  52 62
    Ajs_2775 2938949 .. 2938969 +  -7.6  -2.63631   CCTGGGACTCGATCC           CGATGGCGC ACGA GC-CCATCG            TGCTGTGGACCTTCA  51 151
    Ajs_2776 NONE
    Ajs_2777 NONE
    Ajs_2778 NONE
    Ajs_2779 NONE
    Ajs_2780 NONE
    Ajs_2781 NONE
    Ajs_2782 2945381 .. 2945417 + -11.6  -3.12803   GGCGATGCCACGAAG    CTAGGGCCTGTTGGCA CGGAA TGTGAACAGGCCCTCG    TCTTGGATATACCTG  70 237
    Ajs_2783 2947101 .. 2947113 +  -6.9  -3.62864   ATAGCTGGCAGCGCC                CGTCC ACA GGGCG                TTTCAGGTAGATTTG  59 45
    Ajs_2784 NONE
    Ajs_2786 2949798 .. 2949811 +  -8.1  -3.14881   TCACGCCCATTTCCT               GGAGG TATT CCTCC                TTGGTGGGCAGCTTG  54 349
    Ajs_2792 NONE
    Ajs_2793 NONE
    Ajs_2794 2957817 .. 2957830 +  -2.3  -2.90194   CGGCTGGGGCTTCCA               GACTC TGTG GCGTC                TCTGATTCCCGCGAT  40 7
    Ajs_2795 NONE
    Ajs_2796 NONE
    Ajs_2797 NONE
        gltA 2962075 .. 2962101 + -13.7  -5.08824   CGTGCCCCGCCCCCC         GCCCGCACGCA CCTGT TGCCTGCGGGC         TTTTTTGCGTCCGGG 100 71
    Ajs_2799 NONE
    Ajs_2800 2963770 .. 2963780 +  -8.2  -3.14132   TGCATAAAAACAGGA                 GCGC TTG GCGC                 TTGATGCGCAAGGGA  58 34
    Ajs_2801 2964853 .. 2964866 +  -5.2   -3.8709   TGCGCCGCGACTGGC               CGCG ATTGGC CGCG                TTTCTGCCGCCCTTT  60 126
    Ajs_2805 2968265 .. 2968282 +  -8.4  -5.60993   CACCCAAGACCCGAG             GCAGCC ATGACG GGCTGC              TTTTTTTGTCAGCGC 100 53
    Ajs_2814 NONE
    Ajs_2815 NONE
    Ajs_2816 NONE
    Ajs_2817 2982748 .. 2982778 +  -5.2  -2.78596   GTGAAATCGCAACGG       CGCGTGCCACGCCA CGG TAGCGGCGCACCCG       TCTCATGCGGGCGTC  44 6
    Ajs_2819 2984896 .. 2984923 +  -2.6  -3.62591   CGTGGCTGTGATCAA        AGCCGCTGCATCT GGC AGGTGCTG-GGCA        TTTGCGCCTTGTCCG  49 30
    Ajs_2822 2987747 .. 2987766 + -16.4  -4.48903   CGTCGCCTGATTCCA            GGGCGGCC GGGT GGCCGCCC             TTTTGCTATGTTTTA 100 53
    Ajs_2827 2994473 .. 2994510 + -11.4   -4.3014   CCGCTATCAAAAATG   TGAGCTACCAGCGCTTG ATGGA CAAGCGCTGG-AGCCTA   TTTTGATCCATATCT  89 42
    Ajs_2830 2997821 .. 2997877 + -25.8   -4.7629   GGCTCCCAGGACAAA GGCGTCCCCAC-CCGCTCGGACAGCGC ACAT GCGCCGGCCGCGCGGCGTGAGGACGCC TTTTTCCGTTGCTGC 100 252
    Ajs_2831 NONE
    Ajs_2832 NONE
    Ajs_2833 3000955 .. 3000990 +  -7.6  -4.50218   GGCTTGAGGGTTTTT    GGGCT-CTAGCGCTTGC TGG GTAAGCGCTGGCAGCTA    TTGTTTTTGATCATT  81 34
    Ajs_2836 NONE
    Ajs_2837 NONE
    Ajs_2838 3009288 .. 3009337 + -20.8   -5.5353   GGCTCGCGGGACGAA GGCGTCCCCAC-CCGCAACCAGGC CCCT GCCCGGT-GCGGCGTGCGGACGCC TTTTTTGTTGATGTG 100 419
    Ajs_2839 NONE
    Ajs_2840 3012379 .. 3012391 +  -6.9  -3.17723   GGCCCGAATGGGCTG                TCCGG TTT CCGGG                TTCCCTTCAGGATGC  53 90
    Ajs_2841 NONE
    Ajs_2842 NONE
    Ajs_2843 3017571 .. 3017596 +  -9.8  -3.28712   AGAAACAGCTGTTCA         CATGCCGCACC ACCTG GGTGCGG-ATG         TTCTCGGCCACCACC  63 224
    Ajs_2845 3019278 .. 3019298 +  -2.5  -3.16191   GCCCGTACGCGACAA           TC-GGCGG CTTTGC CCGCCAGG            TTGCTGCCCGTGTCC  43 66
    Ajs_2846 3020605 .. 3020619 +  -2.9  -3.01712   GGCCGATTTTTAATA               TTCAT GTAAA ATGAA               TCTTAAGAAAACCGC  43 81
    Ajs_2847 NONE
    Ajs_2848 3022256 .. 3022276 + -16.9  -4.77438   TCAACCAAAGCAAAA            GGGGCAGGT ATC ACCTGCCCC            TTTTTGATCGTCCCT 100 54
    Ajs_2856 NONE
    Ajs_2857 3029974 .. 3029985 +  -3.6  -4.08394   CAGACGGGGAAAACC                GCCG TATA TGGC                 TTTTGGGCCCGATCT  58 85
        rpsU 3030284 .. 3030323 + -19.4  -4.39002   GTTGACACCAGACGC  CACAAAACCCGCGCTAGG GACG CCAAGCGCGGGTTTTTTG   TTTTCTACACCGTTT 100 53
    Ajs_2859 3030994 .. 3031011 +  -8.3  -3.09492   CAGACCACTGGGCTG             CGCGGGG CACG CCCCCCG              TGTTGGGCTTCCCCC  57 204
    Ajs_2860 3032405 .. 3032434 +  -3.5  -3.41366   TTCCCGCCGCGGTCC       GTGCGGCCGGGTTA GCA TAGCCCC-CCACAC       TATATTTTCGAGTCA  49 181
    Ajs_2861 NONE
    Ajs_2862 NONE
    Ajs_2863 NONE
    Ajs_2864 3035040 .. 3035059 +  -6.3  -4.09739   GGCCTTGGCGTCGTC            ACGCGCC TAGATT GGCGCGG             TTTTCACGCCATTCG  67 228
    Ajs_2865 NONE
    Ajs_2866 3037527 .. 3037550 +   -11  -2.75528   TGGGCCGTTGCAATC          GCTGCGCAGA CGCG TCTGGGCAGC           TCGTGTCTTCGCACT  63 94
    Ajs_2867 3038607 .. 3038642 +  -6.2  -5.09225   TATTTAAGCCAAAAC    GGGCTG-CAGCGCTT ACCTATC AAGCGCTGGCAGCTA    TTTTTTCAATAGCAT  85 41
    Ajs_2873 NONE
    Ajs_2874 NONE
    Ajs_2875 3046404 .. 3046426 + -15.6   -5.4505   CGCTGTTCATGCAAG           GGGAGCGTGT CAT GCACGCTCCC           TTTTTTATTGAGGAC 100 65
    Ajs_2880 3052970 .. 3052985 +  -7.5  -4.91852   TGCATCAAAACAAAA              GCGCC CCGAAA GGCGC               TTTGTTTTTGATAGC  88 48
    Ajs_2883 3056053 .. 3056066 +  -9.5  -5.17353   GTGCACTCCATCCAA               CGGGC TGCG GCCCG                TTTTTTCATGCCTGT 100 91
    Ajs_2884 NONE
    Ajs_2885 3057674 .. 3057698 +  -5.6  -3.15544   CAGCGGCACTTGCAG          CAACAGCGCA TCCGC TGCGCCGTGG          TTGCTGGCCATCAGG  49 497
        hemC NONE
    Ajs_2891 3065461 .. 3065471 +  -5.4  -2.91924   ATGAAGTGACAGCCT                 CGAT AGA ATCG                 CTTTATGAGCAATGA  46 0
    Ajs_2892 NONE
    Ajs_2893 3068347 .. 3068359 +  -4.8  -3.63991   CTCGATGGCCTCGAT                GCTG GCGTG CAGC                TTCTTGGGCGTGATC  55 513
    Ajs_2895 3069845 .. 3069857 +  -6.2  -3.28712   GGGTCTGAGTAAAAA                GCGC CTCCA GCGC                TTATCCAGCAAGCGC  52 29
    Ajs_2896 3072864 .. 3072886 + -15.6  -4.56597   AGCCCGATCACCGGA           CAAGGGCGCT GCA GGCGCCCTTG           TTTTTACCCGGCACC 100 45
    Ajs_2897 3073845 .. 3073861 +  -2.9   -4.2828   CCCTGCCCTCCCGCC              CGGGCAT GGG ATTCCTG              TTTTGATAGCTACCA  64 60
    Ajs_2925 NONE
    Ajs_2926 NONE
    Ajs_2927 3100834 .. 3100860 +  -5.6   -3.5627   CCACGCGCTGCCCGT         CGGCCACGGGGC GAT GCTCCAGGCCCG         TTTCGGCCGTAATGT  57 389
    Ajs_2937 3108670 .. 3108680 +  -8.2  -3.75153   TGCGCGGCGGGGATA                 GCCC GTA GGGC                 TTTCCCTTGGAGGCA  69 107
    Ajs_2938 3110329 .. 3110345 +  -7.9  -3.61398   CCGACACGTAGTTCC              GGCCGGC CTC GCTGGTC              TTCTTCCACGCCGCG  60 493
    Ajs_2947 NONE
    Ajs_2948 3117991 .. 3118035 +  -3.6  -3.85698   GCCACGCTTGCGCAC GCCAGAAATGTCCGAAATATG ATAA CATCTTTCGGACAAATC-GAC TTTCTACGCGAAACC  56 119
    Ajs_2949 3118836 .. 3118854 +    -6  -2.73875   TGTTCAGGCTGGTAC             TCACGC CAAGCAT GCGTGA             TGCTCTTGCCAAGGA  46 62
    Ajs_2950 NONE
    Ajs_2951 NONE
    Ajs_2952 3122537 .. 3122547 +  -2.4  -3.06492   CTGAGTGCCAAGAAT                 CGAG TGG CCCG                 TCTTGCAATGGGTAG  41 133
    Ajs_2953 NONE
    Ajs_2954 NONE
    Ajs_2955 NONE
    Ajs_2956 3127307 .. 3127319 +  -3.3   -2.9834   ACAGCTCTGCCATCG                CCTCG TCA TGGGG                TCTGCTTCTCATCAT  42 468
    Ajs_2960 3129891 .. 3129901 +  -2.4  -3.02144   TACACAACCAACTGG                 GCTG ATC CTGC                 TATTGACGGAGGTAC  41 21
        infA 3130206 .. 3130228 +  -6.3  -3.51232   CCACTCATTTCCTCT          GGGATGCGCT TACA AGC-CGTCCC           TTCATTTCCCGAAAG  57 52
    Ajs_2962 3130706 .. 3130745 + -17.2  -3.96148   CATCTCCTTCTTGGC  CTCGAACACCCCGATGAC GAAA GTCGTCGGGGTGTTCGTC   TTTGTGGTGGGGAGC 100 167
    Ajs_2972 3140800 .. 3140815 +  -2.6  -2.66481   CCACCACTTGGTCAA              GG-ACAT CAC ATGTACC              TGCTCTCGGCTTTTC  38 42
    Ajs_2973 3141559 .. 3141585 +  -8.6  -2.52464   TCGTCTACTGCGCCG         CGGGCGCGCC CCCGGCA GGTGCGCCCA         TGCCTTCGCGACCCG  53 167
    Ajs_2976 NONE
    Ajs_2977 3144686 .. 3144718 +  -3.9  -3.14211   TGGCGGCAGGCCCTG      GTGGGCACGGCCCGT GCC GCGCGGCATGCCCAG      TTGCTGAGCCGCCGT  45 413
    Ajs_2979 3146718 .. 3146739 +  -2.3  -3.61398   TTACCCTGCAATCAG           TTCAATGGT TTTT ATCCTTGAA            TTGTTGGCACAACAA  49 109
    Ajs_2980 3148053 .. 3148073 + -14.7  -2.71364   ATCTGACCCTTTTCC            CGCACCGGT CCC GCCGGTGCG            TCCTTCCCGCCATCA  75 35
    Ajs_2981 3149590 .. 3149602 +  -4.8  -3.63991   CTCGATGGCCTCGAT                GCTG GCGTG CAGC                TTCTTGGGCGTGATC  55 513
    Ajs_2984 NONE
    Ajs_2985 3152999 .. 3153012 +  -6.7  -2.81547   AGGCCCGCGCCAGGT               CATCC GCAT GGATG                TGGTTGGTATAGACG  50 318
    Ajs_2987 3154923 .. 3154935 +  -9.1  -2.75064   CGCGGTAAGCGCCGC                CGCTC GGG GAGCG                TGCTTCGCTCAAGCG  57 191
    Ajs_2989 3156504 .. 3156562 + -11.5  -2.75064   AGCCGTCCCAATGGC -GCCCCCTGTTGCGCTGCTGCACCCGCCG CCA CGGCGGGGAC-GCCTCGCAACCGGCGGCG TGCTTACATAAAAAA  63 131
    Ajs_2994 NONE
    Ajs_2995 3162735 .. 3162755 +  -4.6  -4.59773   TAGCTGCTAGCGCTT            GTCCAGCA AGCGC TGCAGGGC            TTTTTCACCCTCAAA  74 61
    Ajs_2996 3163730 .. 3163761 +    -3  -3.72695   CCCAGGAAACGCAGG      TGCTGCTCCTCG-TC GGA GATCGAGAACCAGTA      TTTGATGAGCCGGAT  53 440
        rpsT 3167350 .. 3167363 +  -9.5  -5.60993   AGCAAAGCAGAGAAA               CCGCC TCCG GGCGG                TTTTTTTGTGCCCGG 100 114
    Ajs_3002 NONE
    Ajs_3003 3170299 .. 3170321 +  -6.1  -3.29144   TACCTGAAGTTCCTC           CAGGGCCAC ACCTA GCGGCCCGG           TTCTGCGCGGCATGC  52 205
    Ajs_3004 3170783 .. 3170797 +  -9.2  -3.26428   GGGCGACACGCAGGA               GTGGCC GCA GGCCGC               TTGAATTGGTTCTTC  63 7
    Ajs_3007 3174780 .. 3174804 +  -5.8  -3.65199   GCATGTTGCGGTCGA         GCCAGATGGTCA GAC TG-CC-TCTGGC         TTTGAGTGAGGCGTT  57 405
    Ajs_3014 NONE
    Ajs_3015 3184426 .. 3184438 +  -3.3  -3.04398   CTGTAGGAGCGGCAC                CCTCG CCG CGATG                CTTTTAAACACCCAA  43 84
    Ajs_3016 NONE
    Ajs_3017 NONE
    Ajs_3018 NONE
    Ajs_3019 NONE
    Ajs_3020 NONE
    Ajs_3021 NONE
    Ajs_3022 NONE
    Ajs_3023 NONE
    Ajs_3024 NONE
    Ajs_3025 NONE
    Ajs_3026 3194108 .. 3194123 +  -4.6  -4.82901   TCGCGGCGAGGGCGC              CGCTCC TACG GGGGTG               TTTTTGTAGGAGGCC  80 77
    Ajs_3027 NONE
    Ajs_3028 NONE
    Ajs_3029 NONE
    Ajs_3030 NONE
    Ajs_3031 NONE
    Ajs_3032 NONE
    Ajs_3033 NONE
    Ajs_3034 NONE
    Ajs_3035 NONE
    Ajs_3036 NONE
    Ajs_3037 3203769 .. 3203786 +  -6.9  -4.11141   GGCGGTACTGGTGGC             GGTGCTG GTGT CTGCACC              TATTTTTCTCTCCCA  69 459
    Ajs_3040 3207722 .. 3207749 +  -8.4  -2.77182   TGTGTTCTGTTGTTA        C-CGGGTCACCAT GCT AAGGTGGCCCGAG        TCATTGCGTATGGGA  54 89
    Ajs_3043 3210174 .. 3210185 +  -5.8  -4.19238   TTGTAAACGGGTATG                GTGG CCTC CCAC                 TTTTGAGGTTCACGA  67 114
    Ajs_3044 NONE
    Ajs_3045 3213937 .. 3213961 +  -3.5  -3.96298   TGCAATGCTAGTGAT          GCGATTGATCC GGT GGATTATTCGA          TTTCATTAATAAATA  56 391
    Ajs_3050 3219650 .. 3219679 +  -3.6  -4.82901   GAATACCGGGTGAGC       CTTGGACTTG CGGCATAAAA CCAGTCCAAG        TTTTTATCCGCACCC  75 8
    Ajs_3063 NONE
    Ajs_3064 3232805 .. 3232829 +  -2.7  -2.56314   GGCCCTGCAGCGCAC          CGCTCCCTGAG AGA CTGAGGCATCG          TCCCTTGCGCTTTCT  38 16
    Ajs_3065 NONE
    Ajs_3066 NONE
    Ajs_3067 NONE
    Ajs_3068 NONE
    Ajs_3069 3238559 .. 3238569 +  -2.4  -3.29471   GCAGGCGATCGCCCT                 GGAC CTC GACC                 TTCATGTCGTCGGCG  44 349
    Ajs_3072 3241099 .. 3241117 +  -5.8  -3.03624   GGATGCGGCTCGTGT             CGCGCCGC TGA GCGGCACC             TCCTTTCCTTCATGC  49 15
    Ajs_3073 3243094 .. 3243115 +  -5.3  -2.97021   ACCCAGACTTGATCA           CTGTGCATAA CAT TTATG-ACAG           TCTGATGTTTGCGGA  47 29
    Ajs_3074 NONE
    Ajs_3075 NONE
    Ajs_3076 3246715 .. 3246732 +  -2.7  -3.14211   TGCTGGGAGCAGCAG             C-GCGTAA GAC TTGCGCAG             TTGATCGCCGCGCCT  44 167
    Ajs_3078 3248617 .. 3248628 +  -5.8  -3.14211   GCGGATGCGCGCCAG                CGTG GCCT CACG                 TTCCTGCCGCGCGAT  49 87
    Ajs_3081 3251095 .. 3251115 +  -6.7  -3.53012   AGAACGCCCGCTGCA            TCGCCACGG TTT CCTCGGCGA            TTTCCGGCACCGGGC  58 73
    Ajs_3087 3259065 .. 3259075 +  -8.2  -3.51825   GTAGCCACATGTTGC                 CCGG ATC CCGG                 TTGTACTTGGCATGC  62 42
    Ajs_3089 NONE
    Ajs_3090 NONE
    Ajs_3091 NONE
    Ajs_3092 NONE
    Ajs_3093 3264026 .. 3264046 + -10.4  -3.37869   TGTGAACCCTGGGGA            TGCCTGCC TGGAT GGCGGGCA            TTCGTGATTATTTTT  66 36
    Ajs_3102 NONE
    Ajs_3103 3275988 .. 3275998 +  -2.4  -3.30159   CGCCGCCCACGCGCG                 CAGC CCA GCCG                 TTGTGCCGCACTTCC  44 339
    Ajs_3107 3282047 .. 3282089 +  -3.9  -2.73364   TTGACGACCATCGAT GC-GGCGCGCGCCGCGCCGCG GGC CCAGGC-CGGCGCGCACTAGG TCCTTACACTCCAGC  42 53
    Ajs_3108 3282594 .. 3282604 +  -8.2  -2.78816   TTATGCCGAGCGCCT                 GCGC GCG GCGC                 TGTAGTCCGCGGTCA  54 10
    Ajs_3110 NONE
    Ajs_3111 NONE
    Ajs_3112 3287123 .. 3287143 +  -9.6  -3.05819   CACGGGCCATCCGTC            CGGCGAGG TCGGC CCCCGCCG            TCTTCAGGCTATATA  60 506
    Ajs_3114 NONE
    Ajs_3115 NONE
    Ajs_3116 3292448 .. 3292472 +  -5.5  -3.78934   GGTCGTGAGTTGCGC          GAGCAGCGTGC CCA GCTCGCCGATC          TTGTTCTCCAGCAGC  60 392
    Ajs_3124 NONE
    Ajs_3125 NONE
    Ajs_3126 3301973 .. 3302008 +    -4  -4.53398   TTGATTGGTCAAAAG    TGGCTG-CAGCGCTTGT GGG ATGAGCGCGGGTAGCTA    TTGTTTTTGATGTTG  72 120
    Ajs_3130 3305706 .. 3305747 +  -5.8  -2.57881   AGGGCCGCGGCGCGT TGACGCCATGAGGCGGGGAC CGCA GTCCCCGGCCC--GGCATCA CTTGTAGAGCAGTTG  46 23
    Ajs_3134 3311190 .. 3311227 +  -8.1  -3.28712   GCGCCCGCTCGCCGC   GCGCCCGCTCGCCGCGC ACCC GCTCGCCGCGCGCCCGC    TTCTCGCGCCGCAGC  56 146
    Ajs_3137 3316383 .. 3316401 + -10.2  -4.14927   TCGCCGTGCCTGCCC             GCGCCGGG TTC CTTGGCGC             TTGTGTTTTCTTTGT  81 249
    Ajs_3138 3318874 .. 3318897 + -15.2  -5.45652   ACCTCGCGCTGCCAA          CGCCCCCGCC GCTC GGCCGGGGCG           TTTTTTATTGCGCGT 100 61
    Ajs_3139 NONE
    Ajs_3140 3320619 .. 3320650 +  -9.6  -2.71731   CAGGGTGCGCAGGTG      GCTGT-AGCGCTT ATCCAGC AAGCGCTGACAGC      TCCTTGAACGATAGC  57 19
    Ajs_3144 3324994 .. 3325016 +  -4.1  -3.38071   CGTGCGCAGGGCGCC          GGAGTGAGCC GCAT GGCT-ACCCC           ATTTTTCAGGGTTTG  48 19
    Ajs_3145 3325512 .. 3325526 +  -8.5  -4.60746   TTAGGCCCCCACCAG               CCCGC CGTGT GCGGG               TTTTGGTCTTTTTGG  86 57
    Ajs_3146 3325995 .. 3326043 + -25.6  -2.87463   GCCCCGCTGGCGGGG CGCCCGAAAAAAAGGGAACGTG GTTCG CACGTTCCCTTTTTTGTGGGCG TGTATGGCCGCCGTT 100 52
    Ajs_3151 3332686 .. 3332705 +  -7.8  -2.52676   CCAAAACCAAAGCCC            CGCGCC AGTTCGGA GGCGCG             TGCCTTGAAGGCCTC  49 298
        ompR NONE
    Ajs_3154 3335750 .. 3335775 +  -5.4  -3.59627   CCAGCAAAATTGATA         GCAGCCAGCGC TTGCT GCG-TGGCTGA         TTTACAGCGTTTCCT  55 28
    Ajs_3157 NONE
    Ajs_3158 NONE
    Ajs_3159 3342245 .. 3342263 +  -7.4  -3.22832   TATTCATAGCTGTTA             GCGCTTTT TAA ATAAGCGC             TTGAATGGTTTTTTG  56 71
    Ajs_3160 3343251 .. 3343268 + -12.7   -5.1675   GCTGTACGAAGAAAA             GCGCTGC CGCG GCAGCGC              TTTTTTCATGGGTGC 100 56
    Ajs_3162 3344925 .. 3344958 +  -5.3   -3.3422   TCATCAAAAAGTAGA     GCGCTTC-GCGCTT GCAGGTA AAGCGCTGGAGCCC     GTTTTTACGCCAATG  50 42
    Ajs_3164 3346314 .. 3346351 +    -9  -3.05463   CGGGCGTGAGCCGGT   AGGCGCGGA-CGGAGCC CGCAT GGCGGCGCTCCGCGCCC   TTGCGTAAAAAGCGT  57 64
    Ajs_3170 3350535 .. 3350545 +  -8.2  -2.64099   CGCCGCCGTGGCGCT                 GCGG AAC CCGC                 CTTCTGGTGCGGGGC  52 192
    Ajs_3181 NONE
    Ajs_3182 NONE
    Ajs_3183 NONE
    Ajs_3184 3368279 .. 3368302 +   -11  -2.75528   TGGGCCGTTGCAATC          GCTGCGCAGA CGCG TCTGGGCAGC           TCGTGTCTTCGCACT  63 94
    Ajs_3185 NONE
    Ajs_3186 NONE
    Ajs_3187 NONE
    Ajs_3188 3373960 .. 3373975 +    -4  -3.35798   TGAGGGAGGTCGGCT              CAC-TGC CTC GCATGTG              TTCTGACTGGACGAT  48 74
    Ajs_3189 NONE
    Ajs_3190 3375659 .. 3375676 +  -3.3  -3.29511   CGATGCACCACACGC             CCGCGTG CTTG CATGCCG              TTGTCCGACAGTCGC  46 63
    Ajs_3191 3377897 .. 3377917 + -10.3  -3.14564   TGTTCCCAGTATGCG            GGCGGGCGG TAG CCGTCGGCC            TTCGTGCGCGCATGC  62 448
    Ajs_3196 3382767 .. 3382795 + -19.6  -3.09635   CCCCTTTCTGGCAGA        TGAGGGCGCGGG AAAGG CCCGCGCCCTCG        TTCAATGGTAGACCT  93 436
    Ajs_3200 3386548 .. 3386582 + -13.6  -5.03314   TCCGCTCCAGACCCG    CGCGGGCGCCGTCTC CGGCAA GAG-CGGCGCCTGTG     TTTTTTCGCCGTGCC 100 294
    Ajs_3201 3386979 .. 3387020 + -11.4  -2.78384   GCGGAAAGAACGCCG CCTCGGCGCCTGCCGCCA GCGGCG TGGCGTCATGCGCCATGG  TCTGGTCGAGGGCCA  62 64
    Ajs_3208 3393742 .. 3393761 +    -7  -3.40403   CCCCTGTCGCTGTAT            CCGGGTGC CAGT GCGGCCGG             TTCTCCTGGAGGGGG  57 51
    Ajs_3209 3394456 .. 3394491 + -12.6  -4.62872   ACACGCTCCCCGCAA    TC-CAAAGCCGCCTCGG TCT CCTAGGCGGCTTTGTGC    TTTTTGAACGTTACT 100 111
    Ajs_3210 NONE
    Ajs_3211 3396680 .. 3396715 + -14.2  -4.75308   TCACTACTAAATAAA    TAGCTACTAGCGCTTAC CCA GTAAGCGCTAG-AGCCA    TTTTTGACTCTTAAT 100 51
    Ajs_3217 3400613 .. 3400626 +  -6.7  -3.55444   TTATCCACAAGTTAC               TGGCT ATCC AGCCA                TTTCAGACATCACGG  59 76
        dnaK 3402617 .. 3402654 + -20.6  -3.21099   CATCCCGTGCCTAGC   CGCCGCGTCGGGCCCCG CCAGC CGGGGTTCG-CGCGGCG   TTCGTGCTCCCAACC  95 52
    Ajs_3219 3403829 .. 3403847 + -13.1  -5.47218   TGACCCCCTGGACAA             GGCCCGC GGACA GCGGGCC             TTTTTTTGCCTGGGC 100 38
    Ajs_3220 3405093 .. 3405111 +    -3  -3.85698   CGTTGCCCGGCAGCC             TGGGCCTG GGT CACGCCGA             TTTATGCGGCGGGGA  56 65
    Ajs_3221 NONE
    Ajs_3222 NONE
    Ajs_3223 NONE
    Ajs_3224 3407595 .. 3407628 +  -4.6  -3.02166   GACTCCTGAAACAAT     AGCTGCTAGCGCTTG CTGGA TAAGCGCTGG-AGCC     TGATTTCATTCAAAG  47 32
    Ajs_3225 NONE
    Ajs_3226 3410354 .. 3410377 +  -4.4  -2.52464   CAAACACCCGCGTAG          CG-CCGCCTGC TAC GCTGACGGTCG          TCACTTCACAAAGCC  41 26
    Ajs_3227 3411775 .. 3411815 +  -6.1   -4.7254   TAAAACAAGAGCCAA  AACAGCCTCCAGCGCTTAT CTG ATGAGCGCTGAAAGCTATA  TTTTTCATAGCAAAT  80 38
    Ajs_3228 NONE
    Ajs_3229 NONE
    Ajs_3230 NONE
    Ajs_3231 NONE
        leuD 3415677 .. 3415687 +  -2.4  -2.61264   ATTACAAGCAAAAAC                 AGCC TCC GGCG                 CTTATCCATCAAGCG  38 65
    Ajs_3233 3416834 .. 3416851 + -14.1  -4.72272   CCGCACAACGCGCCA             GCGGCCC TTCG GGGCCGC              TTTTTCGTGGCGCGC 100 52
    Ajs_3234 3417766 .. 3417789 +  -6.6  -2.53876   CGCAGCGGCGATGGC          GGCATGCCCA GCCA TGGGCCTGCA           TGGGTTCCGCTACAA  48 47
    Ajs_3235 3419164 .. 3419181 + -12.7  -5.03715   CTGACGCAGATTCAA             CGCCACC TTCG GGTGGCG              TTTTTTCGAGGTCAT 100 37
    Ajs_3236 NONE
        truA NONE
    Ajs_3238 NONE
    Ajs_3239 NONE
        trpA NONE
    Ajs_3241 3426742 .. 3426778 + -19.6  -5.06414   TGGCATCAAAAACAA    TAGCTGCTAGCGCTTG CTGGA CGGGCGCTAGCAGCTA    TTTTTATTGAGAACA 100 46
    Ajs_3243 NONE
    Ajs_3244 NONE
    Ajs_3245 3430685 .. 3430695 +  -6.8  -3.07043   GGGTGAAAACCACGC                 CCGA TGG TCGG                 TGTTGACATGCTCCA  51 209
    Ajs_3247 NONE
    Ajs_3248 NONE
    Ajs_3249 NONE
        lysS NONE
    Ajs_3251 NONE
    Ajs_3252 3437936 .. 3437955 +   -15  -3.80855   TTGCGGCCTACGTCT            CAGGCCCC CACC GGGGCCTG             TTGATTTTTCAGACC  88 327
    Ajs_3253 3439180 .. 3439195 + -11.8   -4.4261   TGGTCCATTGCATTC              GGCCCC TGGA GGGGCC               TTTTCCTGTTGAGGG 100 87
    Ajs_3254 NONE
        livM 3441371 .. 3441396 +  -2.3  -2.73364   TGAAACGCCACCATG         TGGAGGTGCCC GCAT GAGCGCCCCCC          TGCTTGAGGTCAAGG  39 9
        livG NONE
    Ajs_3257 3442888 .. 3442903 + -11.8  -5.13722   TGGTGCGACACGAAA              GCGGCC TACA GGCCGC               TTTTCTTTTGATAGC 100 49
    Ajs_3258 3443541 .. 3443552 +  -7.2  -3.54424   CCCAACGGTGCCTGG                GCGC GCAA GCGC                 TTTCGGCACCTGCGG  62 51
    Ajs_3284 NONE
    Ajs_3285 3469315 .. 3469337 +  -4.6  -4.18018   TCTCACCGGCGGTGA           GCAGGCGGCG CTC CACCCCCAGC           TTTTCCATGGCGCCG  66 493
    Ajs_3290 3475719 .. 3475749 +  -8.8  -4.51378   GCCCGCGCCATGGCA       GAACACCGGGGGCG TCA TGCCCCCGGTGGCG       TTTTATGCTATCGAT  84 41
    Ajs_3291 3476633 .. 3476646 +  -3.1  -2.83403   CGCCGCCGGGAGCTA               GACGGG TTC CCC-TC               CTTTCCTGGAAGCCC  42 25
    Ajs_3292 NONE
    Ajs_3293 NONE
        queF 3479343 .. 3479392 +  -8.5  -3.25823   CGGCAAAGCCGCGGC CCTGCTCGCCCGCG-CG-CGCGG CTTCCA CCGCGGCGTTGAGCGCCAGCAGG TTGGTCTGGAAGGCA  58 521
    Ajs_3302 3488482 .. 3488501 +  -7.8  -2.81133   CCACTCATTGCAGCT            CCAGCAGC ACGG GCTGGTGG             TCTGATGCCTGCGTC  52 49
    Ajs_3310 3505358 .. 3505384 +  -4.3  -3.14931   GATGCCGTAGTACGG         CAGGTCCTCGA AGCCC TTGAGGCCCAG         TTCGTCGAACGTGGG  47 329
    Ajs_3313 NONE
    Ajs_3314 3509813 .. 3509867 +  -3.5  -4.66833   CAAAGGTCACCACCG CGATGC-CGGCCGC-CAG-C-CAGGCG ATCTG CGCCAGCGTCTGCGCGGCCGAGAGGCG TTTTTGCAGTTGCGG  73 221
    Ajs_3318 NONE
    Ajs_3319 3515501 .. 3515513 +  -4.8  -3.14132   GCAATTTCTGACCGC                TGCC AACGC GGCA                TTCCTGGGCGGCCCG  48 30
    Ajs_3320 3516663 .. 3516673 +  -2.4  -3.28497   CCGCACCGCTGCCGC                 GGCG CTC CACC                 TTCGATTTCCAATCC  45 150
    Ajs_3321 3517929 .. 3517983 +  -6.9  -3.39327   CGAAGTTGGCCTTCT CAGCGTCCTCGCCGCGGCGGCGACGGC GGC GGCG-CGGCGCTGCGACAAGG-CGTCG TTGTAGGTATCGCCC  56 438
    Ajs_3325 3522633 .. 3522657 + -15.7  -5.64274   GGGTAGAATCAATCA          CCGGGCCCAAG TTT CTTGCGCCCGG          TTTTTTTGTGCCTGC 100 58
    Ajs_3326 3523947 .. 3523985 + -13.3  -4.77896   TAGCCCGCATGGGCA   CACGAAACCCTGCTATC AAACC GGTAGCAGGGTTTTTTG   TTTTTGGCTTCGTTC 100 203
    Ajs_3331 3528729 .. 3528752 +   -11  -2.75528   TGGGCCGTTGCAATC          GCTGCGCAGA CGCG TCTGGGCAGC           TCGTGTCTTCGCACT  63 94
    Ajs_3341 3534642 .. 3534660 +  -5.8  -3.29511   GCTGCGTCAACTCGC             CGCGCCCG GCA CGCGCACG             TTCTGACGCCCTGGC  52 1
    Ajs_3342 3535141 .. 3535168 +  -9.9  -2.57931   CACCGTTTTGAAAAC       GGC-GG-GCACGG GCCC CCGTGCACCCGCC        CTTCTCCCGCATACC  59 30
    Ajs_3343 3535848 .. 3535865 +  -6.2  -2.52543   GTTGGCCGATAATGC             GGCGCT TTGCAC GGCGCC              TGCGTTGCGCGCCCT  45 155
    Ajs_3344 3537361 .. 3537385 + -12.9  -3.52475   GCGCGCAATAAAAAA          GCCAGCCCT GGACGAG AGGGCTGGC          TTGTCATGTGTTCCG  76 252
    Ajs_3347 NONE
    Ajs_3348 NONE
    Ajs_3349 3543052 .. 3543088 + -12.1  -3.14132   CTGCACCTGCGCACC    TGCGCGGCTGCGCAGCG CCT CGCCGCCCAGGCGCACA    TTGATGGCCCCGGCG  69 268
    Ajs_3356 NONE
    Ajs_3357 3548301 .. 3548346 +  -2.4  -2.65264   ACGCCCCAGCGCACG GCGCTGGCGCGCTGGGTGGAGC CCAC GC-CCACG-ATCGCGCCCGTGA TGGTGTGGGTGGTGG  38 271
    Ajs_3367 3558091 .. 3558105 +  -4.2  -3.54297   ACGCATTCGAGTTAT               TCAGGG CAT CCCTAA               TTCTAGTTAGTCCCT  53 171
    Ajs_3368 NONE
    Ajs_3369 3558928 .. 3558946 +  -6.6  -3.14132   TTAAAGAGAGCCGCC             GGGCTTGC CCG GCAGGCCG             TTGGTCGGCGGCACC  53 240
    Ajs_3370 3560330 .. 3560364 + -11.5   -3.4285   CCACATTAACCCGTC    GGTCAAGCGGACAGGCC TTC GGCCAG-CCGCTT-ACC    TTGTCCGTTAGATCA  71 116
    Ajs_3371 3560645 .. 3560679 +  -8.7  -4.90266   GTGGTCTAACCCGGC    ACTCAAGCCGACCCGCA TAC TGCGG-TCGGCTT-AGC    TTTTTCGTTAGTCCC  90 32
    Ajs_3372 NONE
    Ajs_3373 3561377 .. 3561395 +  -6.6  -3.14132   TTAAAGAGAGCCGCC             GGGCTTGC CCG GCAGGCCG             TTGGTCGGCGGCACC  53 152
    Ajs_3374 3562922 .. 3562934 +  -4.8  -4.15788   GGGGAGCAAGATTCG                CGGA AGCAA TCCG                TTTGTTGCAGAGATT  65 259
    Ajs_3379 NONE
    Ajs_3380 3568529 .. 3568552 +  -6.6  -3.19192   GCGGACGCGAGCAGC          GCCGC-GGGCG TGC TGCCCAGCGCC          TTGGATTGCGTGCGC  51 378
    Ajs_3383 3572530 .. 3572557 +  -9.8  -4.87626   AGCCCTGCCCACCCG        GCTCCTGCAGGT TTCG GCATGCAGGGGC         TTTTTGATATTCGGG 100 48
        rpmB NONE
        rpmG 3573189 .. 3573213 + -18.5  -5.21709   GGCTCCTGTCAAAAA          GCCGCCCGGCG TTG CGCCCGGCGGC          TTTTTTCATGTCCAG 100 49
    Ajs_3389 3578286 .. 3578311 +  -5.9  -3.40403   ACCTACTGGCTGCGC         GCGCGGCCCGG CACC CCGGCCCTCCC          TTGTCCTACGCCGGC  55 106
    Ajs_3390 3579159 .. 3579179 +  -3.1  -3.33162   CACCACCGCCTGGTC            CAGGATGGG GCC CACGTCCAG            TTCTGCCGTGACCTC  46 213
    Ajs_3392 NONE
    Ajs_3393 NONE
    Ajs_3394 3582744 .. 3582776 + -13.4  -3.32202   CAGCGCTTCTCGGAA      GCATCTCCGCTGGC TTAGC GCTTGCGGGGATGC      TGTTGTGTGCAGATG  77 51
    Ajs_3395 3584231 .. 3584254 +  -2.2  -4.62069   AGAACTGATTCGTGA          AGAGCTTCCC TAAC GGGCAGCACC           TTTTTGCCATGAGCG  68 153
    Ajs_3396 3585610 .. 3585625 + -11.8   -5.4505   GGCCTCATCAAAAAA              CGCGGC CAAG GCCGCG               TTTTTTGTTACCCGC 100 53
    Ajs_3398 3587408 .. 3587459 + -14.2  -2.64099   CCCGCGACCGAATTT GACGGGGCCGCCTTCGCCCCGCCAG CGC TTGGCGGGTCGC-GCCAGCCCCGCC CTTGTCCTGCCCCCG  74 24
    Ajs_3399 NONE
        lspA 3590866 .. 3590923 +  -7.4  -3.48024   TGCTGCGCGTGCGCC GCGCCGGCTGACACCCGTCTGGGCGCC ACCAC GGCGCCCGTTCGCGGGTATGCTG-CGC TGTTTCATGGTCGCA  60 15
    Ajs_3401 NONE
    Ajs_3403 3595361 .. 3595376 +  -4.6  -3.06261   GGTCAGGTGTCGGCA              CGTCCG GTGG CGGGTG               TCTTCCACATTAACG  47 81
    Ajs_3406 3598658 .. 3598672 +  -3.5  -4.11394   AACGCACACCCTTGG               TGCGC AGCTG GTGCA               TTTTGGCGATGGAGT  61 392
    Ajs_3410 3604032 .. 3604054 + -12.7  -3.14344   CCCACTCGCGGAAAT          CGCCGGGCGG GGGG CCGC-CGGCG           TTGGTGACCACGATG  73 429
    Ajs_3419 3612593 .. 3612629 +  -6.5  -4.18018   TTACTATTGAAAATA    TAGCTGCCAGCGCTT ACCCAAC AAGCGCTGGAGGCCG    TTTTAGCTCAAAACA  69 42
    Ajs_3423 NONE
    Ajs_3424 3618739 .. 3618756 +  -2.7   -2.7274   CATTAAGCCGTATGA             TCCAG CGCCATTC CTGGA              CTCTTATTGGTTTTC  39 84
    Ajs_3425 3619409 .. 3619419 +  -5.4  -3.89695   GGTCTATCAGCGCGT                 CAAC GGG GTTG                 TTCTCTTTGTCCAGC  63 357
    Ajs_3428 NONE
    Ajs_3429 3621727 .. 3621744 + -14.1  -5.60993   TATGGATGGCGAAAG             GCGCGGC ACAG GCCGCGC              TTTTTTTGTCCCGAC 100 63
    Ajs_3431 NONE
    Ajs_3432 3625435 .. 3625455 +  -7.5  -3.14132   CAGCCGGCGCAGCCA            TTGCAGCAG CAC CTGCGGCAG            TTCCTCGGGCCGCGG  54 177
    Ajs_3437 3631517 .. 3631543 +  -6.5  -2.92078   CCTCATGCTGTCGCC        ACTGGTC-GCGC TGCT GCGCTGACCGGC         TCCTTCTCTGATTCC  50 4
    Ajs_3438 3632992 .. 3633018 + -16.7  -4.98531   CGCACCAAGAAAAAA         GCCTTGCAAGC GACTG GCTTGCAAGGC         TTTTTAGTTTGGCGG 100 150
    Ajs_3439 3633900 .. 3633933 +  -7.3  -2.77899   CGCCAGGCTTTGCTG     GC-CCGCGCCCTGGAT GCA ACCCAGGACGCCGTGC     TGATTGCTGACCACC  52 486
    Ajs_3441 3636007 .. 3636022 +    -4  -3.57462   TATCGATGAGTTCAA              GCAGATC AAT GA-CTGC              TTTGGCCATGAGGTG  53 516
    Ajs_3444 3638351 .. 3638367 +    -5  -2.86728   TGTAGAAATGCAAAA              CGGGCC ACTCG GGCCCA              TCTGATATGAATACT  46 421
    Ajs_3446 3640670 .. 3640709 + -12.1  -3.39482   GCCGCTCGCAGGATC  GGCGCTGACCTCCTCGTC GGGCA GGCG-GGAGGCCAGCACC  TTGTCGATGGTCTTG  72 50
        radC NONE
    Ajs_3451 NONE
    Ajs_3452 3646684 .. 3646711 +  -5.4  -3.62046   CCAGCTCTTGGCCGC        TCCGTTGGCCAC GCGC GTGACCTGCGGG         TTCTTGCGCACGTAC  54 337
    Ajs_3465 3661239 .. 3661279 +  -7.9   -4.4078   CCTCCGGGGCGGCCA  GGCCCAGGCGCTGCAGGTC GGT GCGCAGCCGCGCCAGGGGC  TTTTCGTTCAGAAAG  77 415
    Ajs_3480 3676433 .. 3676464 +    -3  -3.18031   TTAGCGTTCAATCAG      GCTGC-AGCGCTT TACGAAC AAGCGTGAGCAGC      TATCATTTTTGAACC  44 42
    Ajs_3481 3677637 .. 3677694 +  -8.1  -2.94232   GGCTGATCCGCGCGG GCCACTTGCGCGCCCTGGCGGTGACCG CGTC CAGCTACAGCTCGGGCCAGCACGTGGC GTTCTTTGACGCCGG  55 510
        metG NONE
    Ajs_3484 3681308 .. 3681366 +  -6.6  -3.28712   GTGTCGTCGCATGTT CGCGGTGCAGG-CGCGCGAGCTGCTC GTCGGCCTG GGGCAGCG-GCGCGTCCAACAGCGCG TTGTCCAGCAGCACG  53 463
    Ajs_3486 NONE
    Ajs_3487 NONE
    Ajs_3488 3686569 .. 3686593 + -20.1  -4.07526   GAGAGCCCCACGCAA          GAAAGCCCCGC ACC GCGGGGCTTTC          TTTATATGAATGATT 100 49
    Ajs_3491 3688373 .. 3688404 +  -5.2  -3.10056   TACACATCAAATCAG      GCT-CCAGCGC CCATGCAGCAA GCGCTGGCAGC      TATTGAATAAATAGT  47 47
    Ajs_3492 NONE
    Ajs_3493 NONE
    Ajs_3494 NONE
    Ajs_3495 3691799 .. 3691809 +  -8.2  -3.14132   GTTGGGGTGCCCGCC                 CGGC CCG GCCG                 TTCCTCACCGGGAGA  58 97
        panB NONE
        panC 3698116 .. 3698131 + -11.8  -4.87626   CGCGCACGACAAAAA              GCGGCC TGCG GGCCGC               TTTTTGCTGTTCACG 100 290
        gpmA 3701289 .. 3701320 +  -9.3  -3.29144   AAGGCCGCCGCCGCC      GTGGCCGCGCAGG GCAAGG CCTGAGCCGCCGC       TTCTGGAAAGCGTAG  63 2
    Ajs_3506 3702885 .. 3702910 + -16.9  -4.56597   CTTTCTTGGCAACCA         GGCCGGGACTCC CGC GGAG-CCCGGCC         TTTTTCACGCCCACC 100 47
    Ajs_3507 3703758 .. 3703773 +  -3.2   -4.8622   CCTGTTTTCATACAG              TAGCGC CGAT GCCCTA               TTTTTCGTTCCCGGC  75 88
    Ajs_3508 3704275 .. 3704325 + -32.2  -3.76952   CTTACTCTCAAACCT CTGCACAAAGCACAAGGGCCAGTC AGT GACTGGCCCTTGTGCTTTGTGCGC TTTGCGTTCAATCGA 100 86
    Ajs_3510 3706470 .. 3706490 +  -6.7  -2.66964   TCACCTGACGCGTTC            CCAGCCCTG CGT CCGGGCTGC            TCATCTGATCGGTGG  48 33
    Ajs_3511 NONE
    Ajs_3512 NONE
    Ajs_3513 3707858 .. 3707877 +  -2.1  -3.64716   TGCAACAGGCCGCAG            CGGG-GTT ATCCC AGCACCCG            TGTTTTCAACCATAA  49 75
    Ajs_3514 3708243 .. 3708261 + -17.4  -5.81412   ACGACTGCGCAGGAA             CGCCGCCC TCT GGGCGGCG             TTTTTTTTCACTGGC 100 46
    Ajs_3515 3709409 .. 3709438 +  -2.7  -3.28712   ACACCGTGGCGCGGC       GCT-GATCACGCCG CGG CGGTGCGGCCCAGC       TTGTGCAAGAGGCGC  45 21
    Ajs_3520 3714721 .. 3714752 +  -3.7  -3.33696   GAGATAGTTACCCCC      T-GTGGGCGGATGC AGGCG GCATCTGCCAGCCA      TTGCTTCAACGCGGC  48 39
    Ajs_3522 3716286 .. 3716313 + -14.1  -5.27335   CGGGCAGATAATCCA        GGCGCGCAGCC CTCACC GGCTACGCGCC         TTTTTCTTTGCCGGC 100 65
    Ajs_3523 3717561 .. 3717597 +  -2.9  -4.33151   GCGCTACGGTATTCA    TAGCTTCCACCGCTTGT CAG ACAAGCGCTGAAGCCCA    TTTTGGCTTGTACTC  64 202
    Ajs_3524 3718590 .. 3718628 +  -7.3  -2.63596   CGACCACCCGCAGCC  CCATGGTGTGCGCCAGCG CGAC CAC-GGCGCGCACCAGCG   TGGTGTCGCCTCCGC  47 220
    Ajs_3531 3725038 .. 3725051 +  -9.5  -4.59773   CTCCGCGTAAAAAAA               GCGCC TTGC GGCGC                TTTTTCCCGATCCGG  91 166
    Ajs_3538 3730406 .. 3730422 +  -7.9  -3.06492   GGCGAGGATCGGCCA              GCCGCTG GGC CAGCGCC              TGTTCCAGTCGCTGG  53 225
    Ajs_3540 NONE
    Ajs_3541 3732563 .. 3732577 +  -3.5  -3.29144   CGCACCAGCGCCTCG              GCCACG CACA CG-GGC               TTGTCGCCACCCTCG  47 92
    Ajs_3545 3737166 .. 3737176 +  -8.2  -3.30771   GGTCGGTCATGGCGG                 GGGC GCT GCCC                 TTGTAGGGGATGTGC  58 457
    Ajs_3551 3742424 .. 3742450 + -10.9  -3.95584   CCTTCACCGACAACT        CCA-GC-GGCCCG ATG CGGGCCTGCGTGG        TTTCCTTGGTGAAGC  79 199
    Ajs_3553 3743364 .. 3743405 +  -3.6  -2.71712   CGCCGCGCCTCGAAG GCATCGGACAGCCGCACCA GCCGG TCGTGCGCATG-CCGCTGC ATTTGCGCGCGCCAC  41 266
    Ajs_3556 3746050 .. 3746089 +  -4.8   -3.4072   TCATGAACCAGCGCA  ACCGCTGAGCCAGAGCCCG TCA TGAGCACTG-CACAGCGGC  TTCTGATGGAAGGTG  53 18
    Ajs_3557 NONE
    Ajs_3558 3746922 .. 3746932 +  -2.4  -3.95022   CCCGTTGAATAAGCG                 CTGG AGG CCTG                 TTTCATGTTGATCGA  54 29
    Ajs_3559 NONE
    Ajs_3560 3750087 .. 3750097 +  -5.4  -3.75115   GGGATTTTGATATTT                 TTCG TTT CGAA                 TTCCTTTTCTGGCAC  58 78
    Ajs_3561 3754507 .. 3754527 +  -3.2  -3.60627   ACTAGCGCTCGCCGT           CCGTC-CCA GCCT TGGTGTCGG            TTTCCGGTGCCGTGG  51 248
    Ajs_3566 3760315 .. 3760327 +  -5.5  -3.28712   GGCTCAAGACTTGTC                CTTGC GCG GCAGG                TTCTCCAGCGCGGCC  52 81
    Ajs_3580 NONE
    Ajs_3581 3778842 .. 3778892 +  -3.5  -2.77899   TGTTCCAAAAGCTAT AGTTTTCATAGCTTCCAGCGCTT GATGGGA GGGCGCTGGAGGC-AT-AAAACG TACTTGCTCCCCCGC  40 24
    Ajs_3582 3781264 .. 3781307 + -10.9  -2.82516   CACCAGCACCATGAA CACCACCAGCACCCAGCCCAG CCAG CGGGGCCGGG-GC-GGCGGTG TGTCGTCGTGCAGCG  61 503
    Ajs_3587 3785156 .. 3785169 +  -2.3  -3.87815   ACACCAGGCACCGTG               GGCTT TCCT GGGCC                TTTGTGCCCGTCAAG  54 158
    Ajs_3591 NONE
    Ajs_3592 3788889 .. 3788905 +  -9.3  -3.18681   AATGGCGGTCGGCGC              GGCCGGC TCA GACGGCC              TTGGTGAGCTTGCGC  61 83
    Ajs_3595 NONE
    Ajs_3596 NONE
    Ajs_3597 3792758 .. 3792792 + -15.8  -2.60212   TGCCCCAGCTCGACT     CGTCGCGGAGTCGGTT GTA AATCGACTGCGCGATG     CTTCTGACCTGCTCC  74 221
    Ajs_3620 NONE
    Ajs_3621 3826032 .. 3826044 +  -3.3  -3.18264   GCGCTGCAAATATGA                GAGCT GCT AGCGC                TTGCTCACTGAGGAC  44 78
    Ajs_3622 3827917 .. 3827936 +  -3.5  -3.07013   CGGCCCAGCCGGGTC            CTCAGGC ATGAAG GCTTGGG             TATATTCCCGGCATC  43 15
    Ajs_3623 3828868 .. 3828892 + -19.3  -5.27335   CACCACCAGATACAA          CCCGCAGCGCC CCA GGTGCTGCGGG          TTTTTCTTTAGCCGC 100 136
    Ajs_3624 3829492 .. 3829520 + -10.9  -3.35522   CCAGCCCGCAACCGC        CCCGCTGCCGC CTGCGCC GCGGCGGCTGG        TCTTTCGCGAGATTG  69 105
    Ajs_3625 3831332 .. 3831367 + -11.1  -2.95789   TGGCCGTGAGCTGCG    CGGGCAGCTTGTCCA TGAGGC TGGACAGGCCGCCCA     TCTGCTTCATCTGCT  62 461
    Ajs_3627 NONE
    Ajs_3628 NONE
    Ajs_3629 NONE
    Ajs_3630 NONE
    Ajs_3631 3837595 .. 3837615 +  -5.3  -3.53012   ACTAGATATAGTGTG            CGGCGAC AGTCTAC GCCGCCG            TTTCGCCGGCCGAAG  53 295
    Ajs_3632 3840676 .. 3840690 +  -5.6  -4.67038   AACAGATCACGCCTG               GCAACG CTT CGGTGC               TTTTCATTTTGAAGC  76 102
    Ajs_3633 3842047 .. 3842081 + -11.4  -3.57144   TCAGTCGTCGCCATG     GATCGCTCCACGCC CAATGCA GGCGTGGGGTGCTC     TTTGCAAATCGACCC  73 144
    Ajs_3634 3842716 .. 3842733 + -12.7  -5.60993   CAGTCCAGCCTACGA             CCCGGTG CTTG CACCGGG              TTTTTTTATGGCGAA 100 51
    Ajs_3642 3850949 .. 3850983 +  -9.3  -4.74103   AACTATCAAAACAAT     AGCTGCTATCGCTTG ATTAA TAAGCGCTAGCAGCC     TTTTTGGCTTGAAAC  93 24
    Ajs_3649 3859353 .. 3859364 +  -5.8  -2.52543   CATTGGCGGGCGTGA                CCAC CGCA GTGG                 TGAGTTGCGCGAACT  44 247
    Ajs_3654 3864912 .. 3864933 +  -5.7  -3.14211   GCACCGCTGATAATC           GGGCGCCGT GACA ACCGCTCCC            TTGCTCCACCGCCAT  51 15
    Ajs_3655 NONE
        aroE NONE
    Ajs_3657 NONE
        ruvC 3868088 .. 3868106 +    -8  -3.64703   TGAACGACTGAACGC             GGCCCTTG CCT CTGGGGCC             TTTCCCTACGCAGCA  62 38
    Ajs_3660 3871656 .. 3871685 + -10.6  -3.66999   CTGATACGGCCACTT       GGAGCCGGCCTG GCATGA CAGGCCGGCGGC        TTTGCGTGGGTCAGT  70 37
    Ajs_3664 3876945 .. 3876964 +   -15   -4.8622   ACCGCACATGAAAAA            GCCGCTGG CACG CCAGCGGC             TTTTTCATTCAGGCA 100 107
    Ajs_3689 3905628 .. 3905641 +  -3.1  -3.72576   CGGTTCGGCCGGCAC               GGG-CA GGT TGTCCC               TTTGATCGCCCCAGA  54 59
    Ajs_3690 NONE
    Ajs_3691 NONE
    Ajs_3692 3908394 .. 3908405 +  -3.6  -3.28712   TGGCGCTACCTGCAG                CCGT GGGA GCGG                 TTCTGAACGACGCGG  46 8
    Ajs_3693 3910763 .. 3910788 +  -8.1  -3.64822   GCGGTTGGCGATGCG         CGGCGTGCCGC GCGA GCGGCGCGCGA          TTTCCATGCCGCCCT  63 402
    Ajs_3695 NONE
    Ajs_3696 NONE
    Ajs_3697 NONE
    Ajs_3698 3917925 .. 3917944 +  -6.3  -4.09739   GGCCTTGGCGTCGTC            ACGCGCC TAGATT GGCGCGG             TTTTCACGCCATTCG  67 228
    Ajs_3701 3921119 .. 3921129 +  -6.8  -3.56099   AGATAAGCGCTGGAG                 GCCA AAA TGGC                 TTTGAACCAATTGTC  59 85
    Ajs_3702 3921591 .. 3921625 +    -4  -3.63744   CGGCATAACTGGCAG     GCGCTCACCACCACGG GCG CCGGGGTGCGGAAAGC     TGTTTTGCGCCCAGG  53 33
    Ajs_3703 3922966 .. 3922989 +   -11  -2.75528   TGGGCCGTTGCAATC          GCTGCGCAGA CGCG TCTGGGCAGC           TCGTGTCTTCGCACT  63 94
    Ajs_3704 3924115 .. 3924129 +  -7.8  -2.56596   GTGGCCGCAGTTCGC               CCCCTG CCG TAGGGG               TGAGTTCATCCACCG  50 297
    Ajs_3708 NONE
    Ajs_3709 3930513 .. 3930547 +  -5.1  -4.94992   GCTACTTCATCGATA    GCTGCTC-G-CGCTTAT CCC ATAAGCGTTTGAGCCGC    TTTTTATCAATTTAG  80 52
    Ajs_3711 NONE
    Ajs_3712 3933817 .. 3933832 +  -5.4  -3.05596   CTCCACCATCGTGGC              CTCGCGC GAC GCGC-AG              TTGCGTCCCAGCGTG  47 102
    Ajs_3714 3935586 .. 3935600 + -12.8  -2.60244   CGGCGGTTGAAGGTC               GCGCCG CCG CGGCGC               TCACTTGATTGGGCG  67 31
    Ajs_3718 NONE
    Ajs_3719 3940555 .. 3940573 + -14.6  -3.51976   GCGTTGCCAAGCCTC             GCTGGGGT AGC ACCCCAGC             TTCGTTTGGCGCCTT  83 288
    Ajs_3720 3942068 .. 3942090 +    -4  -3.33696   CTCGCGGAGACGCCA           TTGACGGGCA TGG TGCTCGCCCA           TTGGTTCGACGGGCG  48 75
    Ajs_3721 3943217 .. 3943253 + -18.1  -4.13945   GCGCTCCTGAAAAAA    GAGCTGCCAGCGCTTGA TTG TCAAGGGCTGGCAGCTG    TTTTGGCATAAAAGT 100 41
    Ajs_3723 3945015 .. 3945030 + -11.8  -5.31456   GCACCTTTTTGACAA              GGCCCC GCAA GGGGCC               TTTTTTATGCCTTGC 100 51
    Ajs_3724 3945950 .. 3945960 +  -6.8  -2.78384   TGCGCCGCTGGCCGC                 GGAG ATC CTCC                 TGTGATGCGCCCGCG  49 10
    Ajs_3725 NONE
    Ajs_3726 NONE
    Ajs_3727 3950112 .. 3950153 +  -9.3  -3.85698   GGCACGCGCGGCTCG GGCGCGGCGGC-CTGAACCG GGC CAGTTCACTGCGGCGGCGCC TTTCTCCAGACCGGC  74 11
    Ajs_3740 3964999 .. 3965023 +  -9.9  -3.28791   CTTTACAACGCAAAA          GCCCCTGCCGG ATG TTGACAGGGGC          TTGTGAAGCGAAGGT  66 439
    Ajs_3748 3976665 .. 3976711 + -15.1  -2.71731   CGCTGAAGCCCTTTT CGTGAGGTCAGACGCCGCCCGG GTGA TCGCGCGGCGTCTG-CGGCACG TCATTCCAGCGTAGG  78 35
    Ajs_3749 3977943 .. 3977999 + -25.4  -3.06796   CCACGGCGGCGGAGT CC-ACCGC-CCCATCCAAAACGCGGAGC CTG GCTCCGCGTTTTGGATGGGTGGGGCCGG TTCACTGCGCTGCGC 100 54
    Ajs_3756 3985358 .. 3985370 +  -9.1  -2.78384   CCCACGCCAATGGTG                TCGGC CAC GCCGA                TGTGCTGCACGCCGA  55 416
    Ajs_3765 3995843 .. 3995860 +  -4.8  -2.73635   ACTTTCCACGCCCTT             GCGG-GC CATCT GCACCGC             CTTTGCGGCCATTTG  44 354
    Ajs_3767 NONE
    Ajs_3768 NONE
    Ajs_3769 4001312 .. 4001326 +    -7  -5.00616   GCAGAAACTTCTGGC               CCAGCG GGG CGCGGG               TTTTTTCGGAAAAGA  87 399
    Ajs_3772 4004574 .. 4004603 +   -15  -3.17194   TTTTAAGGCACCGGT       TGCAGCCCGGCC TTGCGC GGGCGGGCTGCA        TTGCATTGCCGCACT  80 35
    Ajs_3784 4015722 .. 4015752 + -17.6  -3.63627   AAGCCCAAAAGCAAA       ACGCCCTCCCACTG TGT TAGTGGGAGGGCGG       TTTGGGCTGTAAGAG 100 154
    Ajs_3785 4023578 .. 4023594 +  -2.2  -3.36878   AGACGATGCAACTGG              CTTCGT CCTGC ACGTAG              TTGTAGCTGCCTGCG  46 175
    Ajs_3793 NONE
    Ajs_3794 4031859 .. 4031871 +  -3.3  -4.13561   AATGGCTTGTAGCAA                GCGCT GGC AGCTC                TCTTTTTTGACCGGC  61 97
    Ajs_3808 4043548 .. 4043570 + -11.3  -4.74103   TTCGCATATAAAAAA          GCCGGCCACC TTGC GGTG-CCGGC           TTTTTGCGTTGCCCC 100 115
    Ajs_3815 NONE
    Ajs_3816 4051453 .. 4051467 +  -2.8  -2.53641   CTCATCGCCGAATCA               GTAACA ACT TGTCAC               GTTGCTGATGACTTA  39 22
    Ajs_3817 NONE
    Ajs_3818 4052684 .. 4052694 +  -2.4  -4.19371   GCCGCGAATAACGCC                 GGCG CAA CCCC                 TTTATTCGGGCTTTA  59 173
    Ajs_3819 NONE
    Ajs_3820 NONE
    Ajs_3821 NONE
    Ajs_3822 NONE
    Ajs_3823 4059121 .. 4059158 + -12.2  -5.81032   ATTCTTTGGATGAAA   TAGCTGTTTTGCGCTTG CTGGA CAAGCGC-GAGCAGCTA   TTTTTTTTGAGCTTG 100 40
    Ajs_3827 NONE
    Ajs_3828 NONE
    Ajs_3829 4062621 .. 4062640 +  -6.4  -3.72576   ACTTCCGCATTCACA            GCGT-GCTC TGA GAGCCGCGC            TTTCCTCCAGGAGAA  62 15
    Ajs_3830 NONE
    Ajs_3831 NONE
    Ajs_3832 NONE
    Ajs_3833 NONE
    Ajs_3834 4067578 .. 4067616 +    -3  -4.34402   TAAACTATTATTTTT   ATAGCTACTAGCGCTTGA TGG TAAAGCGCTGGAGGCCAA   TTTTGCTATCAGCGC  64 38
        flgI 4068892 .. 4068904 + -10.5  -3.17075   TGCGCGTCCTTCCCC                GCGGC GGC GCCGC                TTCCATTCAAGGCCC  64 50
    Ajs_3836 NONE
    Ajs_3837 NONE
    Ajs_3838 NONE
    Ajs_3839 4074578 .. 4074590 +  -5.5  -3.90762   CGCACTGATGGCGAC                TCACG GCC CGTGG                TGTTTTTGGGCCGTA  62 33
    Ajs_3840 4076053 .. 4076091 +  -7.3  -3.72576   CGGCGCGTGACGGCG   CGGCACCTCGGCGTTTT GAGCA AAAACGCCGCGCAGCCC   TTTCCTGGCCAGCGC  65 31
    Ajs_3841 4077916 .. 4077931 +  -4.6  -3.53012   CGCTGGGCCAGCATG              TCGGTG TCCA CGCCGG               TTTCCACCCAACCGA  52 235
    Ajs_3843 NONE
    Ajs_3844 4080992 .. 4081032 + -10.1  -2.78463   GCCCCGTGAAAACCC  TGGACCCGGCGCCGCGCCC CTC GGGCGGTGCGCCGTTGCCG  TATGCTGCGCGCGCT  60 47
    Ajs_3845 NONE
    Ajs_3846 NONE
    Ajs_3847 4084375 .. 4084407 +  -8.5  -2.60075   CAAAACTTTCATCGC     GGTGTTTGACGCAG CCCTGC CTGCGCCAA-CACC      ATTGCTTCCAAGCCG  53 126
    Ajs_3848 NONE
    Ajs_3849 4086929 .. 4086947 + -12.4  -3.51976   GCGTTGCCAAGCCTC             GCTGGGGT AGC GCCCCAGC             TTCGTTTGGCGCCTT  74 202
    Ajs_3850 NONE
    Ajs_3851 4088972 .. 4089008 +  -4.6  -3.52923   TTTGCTATTGAAAAG   CGAGCTGTTAGCGCTT GATGGAA AAGCGCTAG-AGC-CG   ATTTTTGCTTAAATT  53 46
    Ajs_3853 NONE
    Ajs_3854 4093359 .. 4093379 + -12.5  -3.04144   TGCGGGTAGCGCGTG            CGCGTGCCG GCG CGGCAGGCG            TATTCCCACTCGGCC  67 468
    Ajs_3856 NONE
    Ajs_3857 4095942 .. 4095973 +  -7.2  -3.18264   CTCGTCCAAGCGCCT      GCGCAAGCTCCCAT ATTG ATAGCTGCTTGCGC       TTGATGGATAAGCGC  56 7
    Ajs_3858 4097755 .. 4097769 +  -2.7  -2.86164   CGATCAGCACCAGCA               CCACG AACAG CGGGG               TGTAGTGCTTGACGC  41 440
    Ajs_3860 NONE
        hemE 4100883 .. 4100906 +  -2.4  -3.64822   ATCAACAAAGTTATC          CACAGAAAAT CTGG ACTTCCTGTG           TTTCCCTCGCAAAAT  49 264
    Ajs_3862 4103479 .. 4103499 + -10.3   -4.4009   TCTGAGGCCGCCACC            GCTGCGGGC GGT GCCCGCGGG            TTTTCTCGCATGGCA  95 36
    Ajs_3863 4104903 .. 4104913 +  -8.2  -3.18031   GCGCAGTCCCATCCT                 GCGC CAA GCGC                 TCTCATTTTTGAACC  58 221
    Ajs_3865 NONE
    Ajs_3866 NONE
    Ajs_3867 4109935 .. 4109963 +    -6  -3.02511   GGGCGGGCCCGCGCC       CTGCGCAATAAGC GCCT GCTT-TCGCGCGG        TATTCGCCCCATCAC  49 180
    Ajs_3868 4110451 .. 4110474 + -16.8  -4.02334   CTTGATTCAATAGCA          CAACGGGTCC CGCG GGACCCGTTG           TTTCTGGTGTCAGTC 100 68
         tgt 4112267 .. 4112309 + -13.4  -2.57468   GCGTAGGCGGCGGCT GACGGCGAGG-GCCG-GCGC ATTCC GCGCGCGGCGCCGCGCCATC CTTCCTATGCTGGGG  71 45
    Ajs_3871 4113422 .. 4113436 +  -5.6  -3.92522   GCGCTCCTGCTCGGG               CAGGGC CTC GGCCTG               TTTCTGGCGTTCCAG  63 509
    Ajs_3877 4118116 .. 4118142 + -13.6    -3.137   CATGGGCACCACCGG         CGCCCGCACGCC GTC GGCCTGCGCGCG         TTCGATGATCTTCAT  72 266
    Ajs_3879 4120886 .. 4120899 +  -3.8  -3.28924   CGTCGCCCCCACACG               CCTG CACGCA CAGG                TTCTCGCGCCCACTG  47 163
    Ajs_3882 NONE
    Ajs_3883 4123559 .. 4123572 +  -2.4  -3.57144   TGAAGGACGCCAAAA               TCAG CATCGA CTGA                TTTCGCCCTCCACGC  49 12
    Ajs_3884 NONE
    Ajs_3885 4126460 .. 4126496 +  -7.2  -3.21806   CTCAGGTACCAAGGA    CAGGGGGAGCGGCA GCCAGGCCA TGTCGCGCCCGCTG    TTCGCTATTCATTCA  56 296
    Ajs_3886 4128173 .. 4128212 + -11.5  -3.09671   GCCGCCCGCCGGCTC GGCATGCGGCGCGCTGCCTG CGG CGGGCAGCGC-CTGC--GCC TCTTCGAGTTGGGGT  66 322
    Ajs_3889 4130892 .. 4130907 + -10.4  -5.60993   GGGTTTCGCAAAAAA              GCAGCC TCCG GGCTGC               TTTTTTTATACCCGA 100 52
    Ajs_3905 4152804 .. 4152814 +  -3.2  -3.34715   GCTGTACGTGGCCTT                 CGTC ATC GATG                 TGTTTGCCAGGCGTA  46 477
    Ajs_3914 4169780 .. 4169796 +  -5.7  -3.28712   CGAACAACCGCTCCT              TCGCGCC CCA GACGCGG              TTCTCGCGCAGGGCC  51 261
    Ajs_3918 4175286 .. 4175309 +   -11  -2.75528   TGGGCCGTTGCAATC          GCTGCGCAGA CGCG TCTGGGCAGC           TCGTGTCTTCGCACT  63 94
    Ajs_3919 4176732 .. 4176768 +  -3.6   -4.4009   TTGCCATAAAAACAA   G-AGCTGCCAGCGCTTG CCAG CTGGCGCTTTCAGCTAC    TTTTATACCGTAAAC  67 32
    Ajs_3924 NONE
    Ajs_3928 4183145 .. 4183191 + -13.2   -3.1505   CCTGACCGCCTGATT GC-TTGCGCGACGCCCCTGGCCGG GGA TCGGCC-GGGG-GTCGC-CAACGC TTGCTCAGAACTGGT  73 28
    Ajs_3932 NONE
    Ajs_3933 NONE
    Ajs_3934 NONE
    Ajs_3935 4190526 .. 4190538 +  -6.2  -3.28712   GGCGGCGGCCCTCCT                CGGC ATCGC GCCG                TTCTGAACGAGGCCC  52 7
    Ajs_3936 NONE
    Ajs_3937 4192642 .. 4192661 + -16.4  -3.07113   TGCGCCGGCCAGCCA            CGGGGGCG CATC CGCCCCCG             TTCGCTCCCCTGATC  84 87
    Ajs_3940 NONE
    Ajs_3941 NONE
    Ajs_3942 4197002 .. 4197012 +  -8.2  -3.63627   GGCGCGCACCCCATA                 CCCG ACG CGGG                 TTTCCCCTCTGCAAG  65 87
    Ajs_3943 NONE
    Ajs_3944 4199563 .. 4199579 +  -2.1  -2.82933   GATAAAAGGCAAATC              GGCATGC AGC GCTTACC              TATCCTGCGTTAGCA  40 86
    Ajs_3945 4200970 .. 4200981 +  -2.2  -2.75844   CGCTCCCCCCATAAG                C-GCC AAC GGCTG                ATTTGGCATGAAAAC  39 77
    Ajs_3946 NONE
    Ajs_3947 4201567 .. 4201604 +  -7.6  -4.07568   GCGGCACCTGGACCT   GCACACGCACCGCGGCG GGGGG TGATGCGGTGCG-GCGC   TTTTCCCCCGAAAAG  70 1
    Ajs_3948 4202833 .. 4202885 + -13.4  -3.32844   CCCCTGAGCGGCTGC GCCGCTTCCCCCTTCTCTCGCACCGC TGC GCGCTGCG-G-GAAGGGGGACGAAGC TTGTGGCCTGGCGAA  77 49
    Ajs_3959 NONE
    Ajs_3960 4218714 .. 4218729 + -11.8  -5.37043   GCCGCTCACAGAGAA              CGCGCC TTCG GGCGCG               TTTTTTATGTCAAAT 100 53
    Ajs_3961 4219400 .. 4219427 + -14.8  -4.14392   CTTCTGAAGGCAAAA        GGCCGCAGGAGT CAAC GCCCCTGCGGCC         TTTTGCGCGTTGCAG 100 34
    Ajs_3963 4220993 .. 4221023 +  -3.9  -2.78816   CATCAATGGTGGTGC      CCGTGC-CCGCCAT GCAC ATGGCGGTGGGCGA       TCTCCTCGGCCGTGG  42 96
    Ajs_3971 NONE
    Ajs_3972 NONE
    Ajs_3973 4229198 .. 4229236 +    -5  -3.75153   AGCCCTCGCTGCGGG   GCGGCGCGGCCGGCCCAG GCC CTTGCTCGGCTGCCCTGG   TTTCGGTTGCGCCAG  58 99
    Ajs_3974 4230385 .. 4230397 +  -6.9  -2.81133   CCCCGGCCGGGTTGC                CGCCG AGC TGGCG                TGTGCTGGCTGCCTG  49 118
    Ajs_3975 4232653 .. 4232678 + -15.5  -3.28712   GCTGGCCGGGGCGCG         GCGCACGC-CCA CCC TGGTGCGTGCGC         TTGTGCCGCGCCGGG  84 95
    Ajs_3991 NONE
    Ajs_3992 4247112 .. 4247126 +  -2.7  -4.56597   GCAATGACCGCCACG               CCGCG TTCCC CGCGC               TTTTTGCGCGCCCCC  68 34
    Ajs_3993 4247905 .. 4247916 +  -7.2  -3.53091   CTGATCCCTGGCACG                CCGC CGGC GCGG                 TTTGCCGGCCGCGGT  60 37
    Ajs_3997 4252258 .. 4252294 +  -2.8  -3.76402   GAATCCACATCAAAA    TGGCCTCCAGCGCTTG CCCAT CAAGCGCGAGCAGCTA    TTTGATCGATAGCAT  54 39
    Ajs_4001 4256367 .. 4256403 + -13.7  -5.09225   GTTTTTGAACGAAAT    CTGCCTCCAGCGCTTGA CCA TCAAGCGCTGGAAGCTC    TTTTTTCAATAGCAT 100 53
    Ajs_4002 4257051 .. 4257080 +  -9.1  -3.33261   CAGAGGCTTGAGGCC       CGCGGCGCGGCTG TGCG CAGCCGGCCCCCG        TTGTGCGCGTTGGGC  63 200
    Ajs_4007 4264835 .. 4264860 +  -8.1  -3.42574   TGTGCTTGGCCAGCA         GCGGGGGCGCC AGGT GGTGCACCAGC          TTGTAGTCGCCTTCG  59 497
    Ajs_4009 4268872 .. 4268893 + -13.7  -3.33696   CAGCAACCCGCTGAA           GCCGCCCGCG CAT CG-GGGCGGC           TTCGTTCCAGCGAGG  77 130
    Ajs_4010 NONE
    Ajs_4011 NONE
    Ajs_4012 4272910 .. 4272922 +  -5.5   -3.6288   ATAGCTTTCAGCGCT                TGCCT TAC GGGCA                TTTCAGCATTAATTT  57 56
    Ajs_4014 4275176 .. 4275201 + -16.1  -5.40474   TGTGAAGACGAAGAC         GACGCGCGCCC GCAA GGGCCCGCGTC          TTTTTTTACGCCGGT 100 85
    Ajs_4019 4285921 .. 4285949 +  -5.1  -3.81473   GCGCGCGCTGTGGCG        CGCCGTGTTCGGC TGA GTCGGCTACGGCA        TTTAGCTATATTTTT  58 10
    Ajs_4020 NONE
    Ajs_4021 NONE
    Ajs_4022 NONE
    Ajs_4023 4292618 .. 4292657 +    -8  -4.73388   GGGTCTAGCGTGTTT  TAGGGCT-CCAGCGCTT TGACAGC AAGCGCTGGAAGCTATA  TTTTTAATAGCAATT  86 40
    Ajs_4024 4293644 .. 4293670 + -14.5  -5.30616   ATTCCGCAGCAAAAA        GCGCGCACTTCC TCAC GGAAG-GCGCGC         TTTTTCTTTAGGTCC 100 264
    Ajs_4026 4295836 .. 4295868 + -19.2  -3.09823   GTTTGAGCCTTTTTG      CCTGCCCGCGCTTG CCAGC CAAGCGCGGGCAGC      TCTCATTTTGAAAGC  91 49
    Ajs_4027 4296433 .. 4296456 +    -3  -4.07568   GCGTGCATGTGGAAC          CGCTGCGCTG GAAG TAACGTGGCG           TTTTGAGCAAAAAAC  58 9
    Ajs_4030 4298560 .. 4298573 +  -3.1  -3.14132   GCCCCTGCACAGCAC               GG-CTG AAA CAGGCC               TTCCTGCACACGCAC  44 20
    Ajs_4031 4299127 .. 4299161 + -20.1  -5.40072   CCACGGTTCAGCCCA    GCCGGCCCATC-GCGT GCAA GCGCAGATGGGCCGGC     TTTTTTTACACGCGC 100 65
    Ajs_4032 4299745 .. 4299761 + -13.7  -3.06492   CGGCGCGCACGGCGC              GCAGGGG CTG CCCCTGC              TGTTGCCATACCTGC  72 184
    Ajs_4034 4302111 .. 4302133 + -19.2  -2.79327   CCCGTGCCCCAGGCA           CCGCCGCATC TAC GATGCGGCGG           ATTTCGCTGCGCTGG  93 420
    Ajs_4038 4303772 .. 4303807 +  -4.7  -2.93853   CGAGGGGGGAAGTCG    GGAGTGTATGTGGCA AGCTGA TGCAACCTAGACTCC     ATTTCATTGGGGAAG  46 5
    Ajs_4041 4307624 .. 4307642 +  -6.6  -3.14132   TTAAAGAGAGCCGCC             GGGCTTGC CCG GCAGGCCG             TTGGTCGGCGGCACC  53 338
    Ajs_4042 4309264 .. 4309274 +  -6.8  -4.36914   CCGGGCTTGCCAATG                 GTGG TAA CCAC                 TTTTGTCAGAGCCAC  75 354
    Ajs_4048 4315104 .. 4315144 +  -3.8  -4.11216   CGCAGCAAGCCCCCG CCCCGCAGGC-GTGCGCCGC GAA GCG-CGCACTGCCGTCGCTG TTTTAGGCCTGCCCC  63 193
    Ajs_4051 NONE
    Ajs_4052 NONE
    Ajs_4053 NONE
    Ajs_4054 NONE
    Ajs_4055 NONE
         pgk 4322240 .. 4322276 + -22.5  -4.87291   ACGCTATAAAAATCA    GAGCTGCTTGCGCTTAT TGC ATAAGCGCTAGCAGCTC    TTTTTACTTGAACTC 100 53
        pyrF NONE
    Ajs_4059 4324441 .. 4324492 +  -2.1  -3.55444   ACCCGCGGGCCGCGT GCCCACAATGCACAGCCTGGTGCC ACTTC GGCACGACGCAGC-CATGGTGCGC TTTCCACAATGGCAC  49 52
    Ajs_4060 NONE
    Ajs_4061 4326957 .. 4326975 + -14.6  -3.51976   GCGTTGCCAAGCCTC             GCTGGGGT AGC ACCCCAGC             TTCGTTTGGCGCCTT  83 483
    Ajs_4062 4329488 .. 4329499 +  -3.6  -3.61398   ACCCACACCAGCTCG                CGCT GCGT GGCG                 TTCTTGCGCAGGAAC  51 472
    Ajs_4065 4335416 .. 4335431 +  -7.5  -2.78596   CCCTCCGGCGCACCG              GCGGC GTGCAA GCCGC               TATGCTGCGCACCTG  52 49
    Ajs_4066 4336095 .. 4336114 + -16.4  -3.93038   TCGCACCAAGCACAA            CGGGCGCC CCAG GGCGCCCG             TTTGCTATTGCAGTG  95 48
    Ajs_4069 4340334 .. 4340346 +  -4.7  -2.72379   CCGGCAGGGGTTCCC                GCCCC GTA GCGGC                TACTTCCGGGCTTCG  44 17
    Ajs_4070 NONE
    Ajs_4071 4343422 .. 4343441 +  -6.3  -4.09739   GGCCTTGGCGTCGTC            ACGCGCC TAGATT GGCGCGG             TTTTCACGCCATTCG  67 274
    Ajs_4073 4346180 .. 4346205 +  -4.6  -3.61398   CCTGGATGGGCGACT         CGCC-CGGGTC CAGGT GGCCCGCGGGG         TTGTTCAGCCGCAGC  52 520
    Ajs_4075 4349494 .. 4349516 +    -4  -3.57263   GGCGGGGCTGGCCAG           GCGGCGGG CAAACAC CTCGGCGC           TTTCGACGTAGGCGT  51 519
    Ajs_4085 NONE
    Ajs_4086 NONE
    Ajs_4087 NONE
    Ajs_4088 NONE
    Ajs_4089 NONE
    Ajs_4090 4367160 .. 4367206 + -12.3  -3.53012   GACGGGACGAGGCAA GGAGCTGGAGCCCG-CGGGGC CGCTTAT GCGCCGCCGGGCTCCA-CGCC TTTCCACGCCGCAGC  74 39
    Ajs_4100 4380095 .. 4380107 +  -4.7  -4.34402   GCGATTGCCAGATAA                GCGCC AGA GGCAC                TTTTCATCTAGGGCC  68 163
    Ajs_4103 NONE
    Ajs_4104 4384785 .. 4384797 +  -4.9  -4.04206   GCATCGCTATTACAG                TTGTT CAC AACAA                TTTGTCTGCCCATGA  63 85
    Ajs_4106 4388588 .. 4388608 +  -2.5  -4.84359   CCCATTTTTTGGGCA            GGCGC TTGCCTTATGT GCGCC            TTTTTGTCACACTAG  74 97
    Ajs_4107 4389145 .. 4389174 +  -4.9   -3.0438   ACCAACGGTTTTTCT       TCCGCTAGCC-GCC TTC GCCAGGCTGTCGGA       TACTTCTTATTCGTG  47 95
    Ajs_4108 4389837 .. 4389873 + -12.1  -4.24404   CGGCCGCGTGATGAA    GCATGACCGGCCGCAGC CCT GCCCCGGCCGGTCACGG    TTTTGCGCTTTGAAT  86 221
    Ajs_4113 4395876 .. 4395908 + -13.4  -3.01831   TTACAAGCCAAATCG      GCCTCCAGCGCTTG TCCAT CAAGCGCTGGCAGC      TACTATTTTTGAAAG  75 43
    Ajs_4114 NONE
    Ajs_4115 NONE
    Ajs_4116 NONE
    Ajs_4117 NONE
    Ajs_4118 NONE
    Ajs_4119 4403864 .. 4403889 + -11.1  -2.72991   GCCACGATTCCAATT         GCGCGAACACGG GCG CCGCGT-CGCGC         TCGTTGAAGATCTCG  60 155
    Ajs_4127 4413353 .. 4413368 + -10.4  -5.81412   GCTGAGTCAAAAAAA              GGAGCC TTAG GGCTCC               TTTTTTTTGCGTCAG 100 47
    Ajs_4128 4414064 .. 4414079 + -10.4   -4.5442   GCTCCACCATCACAA              GGCTCC CTCG GGAGCC               TTTTGTCCTTCCAGG  95 66
    Ajs_4133 4419130 .. 4419142 +  -6.9  -2.74563   CCTGGCAGAGGAGAA                GCTGC TGC GCGGC                TGATTACACTGTGCG  49 10
    Ajs_4134 4419810 .. 4419824 +  -2.8  -3.44146   ACTATCTTGACCGGT               GTTGGT CGA ATCAGC               TTCCTTATAGGAGAC  49 65
    Ajs_4135 4421155 .. 4421174 +  -6.3  -4.09739   GGCCTTGGCGTCGTC            ACGCGCC TAGATT GGCGCGG             TTTTCACGCCATTCG  67 254
        dnaA NONE
    Ajs_4145 NONE
    Ajs_4146 4434600 .. 4434621 + -10.2   -4.2828   CGTCAGTGAGAAAAA           GCCATGGA CCAACA TCCATGGC            TTTTCATCGCTGGAG  85 81
    Ajs_4148 NONE
    Ajs_4149 4436073 .. 4436116 + -10.9  -3.56643   CGCCGCAAGCCAGCG GCCGCCCACCTGCGCCGCGC GCGCG GCGTGGTGT-GATGGGCGTC TTTGCACACTGTGGA  73 66
    Ajs_4150 NONE
    Ajs_4151 4437621 .. 4437645 +  -4.8  -3.10012   GGTTGCGCACCCAGC          CCTGCACGCC CAGGC GGCGCGCGGC          TTCGGTCATGGACTT  47 294
    Ajs_4153 NONE
    Ajs_4154 4439958 .. 4439976 +  -7.4  -5.63504   CCCCTCCGAACGAAA             CCCAGC CCCGGCC GCTGGG             TTTTTTTGTGGGCTT 100 320
    Ajs_4155 4441680 .. 4441704 +  -9.1  -3.14051   GGCGCGTTCCTGCTG          GGGCGGGGTCT GCA GGTCCACGCCC          TGTTCGTGGACATCG  59 273
    Ajs_4157 NONE
        dinG NONE
    Ajs_4159 4445795 .. 4445840 + -13.2  -3.74693   GGCTACGATTACGCA CCGGTGCCG-GTGGCCCGTGC CTATC GCACGGGGTGCGCGGGGCCGG TTTCCTGCCGTCCCG  81 111
    Ajs_4160 4446521 .. 4446547 +  -2.9   -4.8269   TGGGGTAGCTCCCCC        CGCCCTTGTTGC GGGC GCTACA-GGGCA         TTTTTCATCCTTCTC  75 33
    Ajs_4161 4447485 .. 4447517 + -13.4  -3.33696   GGGCGGCATGCAGCA     CGGGAGCGCTGCCGT ATTC GCGGC-GCGCTCGCG      TTCGTTAAAACACCG  77 282
    Ajs_4162 4447458 .. 4447479 -  -5.1  -3.31263   AGCGGACTTTGACAA           CATTCC-CCC CAC GGGCGGCATG           CAGCACGGGAGCGCT  50 68
    Ajs_4156 4441436 .. 4441472 -  -5.1   -4.3587   GATGAACAATAGAAA    CAGGTGCTAGCGCTTTA CCA TCAAGCGCTGACAGCTA    CGTTTTTAATAGCTA  68 38
    Ajs_4152 4437295 .. 4437316 - -10.1  -3.16564   CGTGTACTTCATCAA           CGGCGCC AAGGAGCG GGCGCCG            GCGGGCGCCCTGGAA  62 148
    Ajs_4147 4434600 .. 4434621 - -10.9  -4.87665   CGTCAGTGAGAAAAA           GCCATGGAC CAAC ATCCATGGC            TTTTCATCGCTGGAG 100 102
        rpmH 4428676 .. 4428690 -  -9.2  -3.55622   CGTAAGCGGCCGAAA               GCCGAG CGG CCCGGC               CTCAGACGGCCAGAC  68 27
    Ajs_4142 NONE
    Ajs_4141 NONE
    Ajs_4140 4426084 .. 4426106 - -19.2  -4.21812   TCGTACCGAAAACAA           CAACGGCCGC TGA GCGGCCGTTG           CAGGGAGCAGGGGAT 100 65
    Ajs_4139 4424278 .. 4424296 - -13.1  -3.71848   CCGCGCCATGAAGAA             GGCCCGC GCGGG GCGGGCC             TGGGGCGTGCATCAC  81 158
        trmE 4422786 .. 4422800 -  -2.7  -2.91383   ACCCTTACTTACACA               TGGCG TTGCG CGCCC               GCCGAGCCGGCTATT  40 36
    Ajs_4137 4422210 .. 4422231 -  -7.1  -3.85698   CGCTGTGGTCACAAA           GCGTGGCGC TCGC GCGCCGTGC            TCAGGTCGCCGCAAT  65 26
    Ajs_4136 4421022 .. 4421040 - -14.6  -3.51976   AAGGCGCCAAACGAA             GCTGGGGT GCT ACCCCAGC             GAGGCTTGGCAACGC  83 241
    Ajs_4132 NONE
    Ajs_4131 NONE
    Ajs_4130 NONE
    Ajs_4129 4414064 .. 4414079 - -10.4  -3.44051   GCTCCACCATCACAA              GGCTCC CTCG GGAGCC               TTTTGTCCTTCCAGG  68 43
    Ajs_4126 4411781 .. 4411808 - -13.4   -5.2422   AACGACATGAAAAAA        CCCGGCTTCGCT AAAC AACGAGGCCGGG         TCCGGGTGCGTGCTG 100 127
        metX NONE
    Ajs_4124 4410006 .. 4410016 -  -2.4  -4.47259   ATTATAATAGCAAAA                 CCCC GCC GGCG                 AGAAATGTCCCCTGC  65 62
    Ajs_4123 4407748 .. 4407766 -  -5.8  -3.40522   AGCGCGCGAGGATAA             CCGCCCCG CCC CGGCGAGG             CCCGCACTCAGGTAA  55 33
    Ajs_4122 4406182 .. 4406196 -  -7.8  -4.07885   TATCGGTGCGCAAAA               GGCGCA GGA TACGCC               AACACCCGCCGCCCG  70 335
    Ajs_4121 NONE
    Ajs_4120 4403652 .. 4403675 - -14.6  -2.62983   CCCACGGCGAGAGCA          CCGCCGCGCTG CTG CAGCGCG-CGG          ACGCGGCCCTCTACG  71 152
    Ajs_4112 4392109 .. 4392133 -  -6.3  -2.64155   CGTGGTGCAAATTCA          TGGTGCAAGGC GGC GCGTCGCCCCA          GCGGGGCGGCGCGCA  48 47
    Ajs_4111 NONE
        ksgA 4389840 .. 4389870 -   -19  -2.77899   CCGCGTGATGAAGCA       TGACCGGCCGCAGC CCT GCCCCGGCCGGTCA       CGGTTTTGCGCTTTG  87 91
    Ajs_4102 NONE
    Ajs_4101 4380188 .. 4380206 - -14.6  -3.51976   AAGGCGCCAAACGAA             GCTGGGGT GCT ACCCCAGC             GAGGCTTGGCAACGC  83 216
    Ajs_4099 NONE
    Ajs_4098 NONE
    Ajs_4097 4376555 .. 4376571 -  -3.5  -3.67296   TATCAGGCAGTCAAA              GGCCCGC AGC GGGGGGC              GCAAGGCAAGCCCGC  51 74
    Ajs_4096 4374708 .. 4374718 -  -5.4  -3.94188   ATTGATTTGAAAGAA                 GCTT TCT AAGC                 GATCGAGGCAAGTTG  60 210
    Ajs_4095 NONE
    Ajs_4094 NONE
    Ajs_4093 4368495 .. 4368512 -  -8.3  -3.81488   CCGCCGCAAAGAGAA             CGCCCGC TGAG GCGCGCG              TGCGCAAAGCAACCG  69 64
    Ajs_4091 4367163 .. 4367205 - -13.5  -2.76263   GGGACGAGGCAAGGA GC-TGGAGCCCG-CGGGGC CGCTTAT GCGCCGCCGGGCTCCACGC CTTTCCACGCCGCAG  72 3
    Ajs_4084 NONE
    Ajs_4083 NONE
    Ajs_4082 4358483 .. 4358501 -  -4.5  -3.71607   CGAAGACCATGGAAA            CGGCGCCC ATCT AGGCG-CG             TGACGACGCCAAGGC  56 242
    Ajs_4081 NONE
    Ajs_4080 NONE
    Ajs_4079 NONE
    Ajs_4078 4350441 .. 4350460 -    -5  -3.04144   CGGTCAGGGGGAAGA            TGCGAATT CATC ACTTCGCA             GCGTGCTTCGCAAGG  47 16
    Ajs_4077 NONE
    Ajs_4076 4348638 .. 4348677 -  -9.8  -3.13432   CGCAACACCAGTGAA  GGC-CGCCCGCTGCCGCAG ATG CCGCCGCTGGAGGCGCGCC  TGGGCCTGGAATACG  62 455
    Ajs_4074 4345736 .. 4345767 -  -2.8  -4.07568   CTCGCTTTGCGAAAA      GGAGGGGCGACGGCC AGT GACCGT-GCCAAGCC      CGCGCCACGGCGTCT  58 85
    Ajs_4072 4343289 .. 4343307 - -14.6  -3.51976   AAGGCGCCAAACGAA             GCTGGGGT GCT ACCCCAGC             GAGGCTTGGCAACGC  83 228
        mnmA 4337973 .. 4337983 -  -8.2  -5.03314   CGCAGCGTGAAAAAA                 CCGG AGA CCGG                 TGCTGAAGCAATTTC  93 122
    Ajs_4067 4336089 .. 4336119 - -17.7  -3.14132   TCGGCCTCGCACCAA      GCACAACGGGCGCC CCAG GGCGCCCGTT-TGC       TATTGCAGTGATAGC  91 86
    Ajs_4064 4330662 .. 4330694 - -16.1  -3.41795   AAAGGTGGAGGAGAA      GCCGGCGCGGAGGCC GGG GGCTGCCGTGCCGGC      AAGCGCCGGCCAGCG  89 162
    Ajs_4063 4329066 .. 4329093 - -15.7  -3.32844   GCGCTTATCCCACAA        GGGTTTGAGGC CACTTT GCCTCAAACCC         GCAATCACCTCAGGC  84 35
    Ajs_4057 4322237 .. 4322279 - -16.4  -4.88388   AGAACGCTATAAAAA TCAGAGCTGCTTGCGCTTAT TGC ATAAGCGCTAGCAGCTCTTT TTACTTGAACTCCTG 100 26
    Ajs_4050 4316320 .. 4316337 -  -5.5  -3.28924   CATGCGCGGTGACAA             GGCGG GGGAGCGG CCGCC              CGCAGGTGGCGGCGC  52 48
    Ajs_4049 4315043 .. 4315090 -  -2.6  -3.88498   TTTTTATATAGCAAA CACATGCCCGTACCGCGCCGGC TGATCC GCCGA-GCGGTCAAGGC-CGCG CAGCAAGCCCCCGCC  54 82
        sucC NONE
    Ajs_4046 4311627 .. 4311653 - -15.9  -4.30014   GTTATGAATCGAAAA         CGCCAGCCTGG GTAAA CCAAGCTGGCG         TTTCTTTTGTGTTGG 100 126
    Ajs_4045 4310711 .. 4310723 -  -4.7  -3.30771   GCATATCCCTCACAA                CCGGC ATT GCGGG                ACTGCGCATCATAGT  50 217
    Ajs_4044 4309784 .. 4309799 -  -3.2  -3.55866   GCACAGGCAAATGAA              GCCC TGGCGGTC GGGC               TGAGCTTGGCGGAAA  51 43
    Ajs_4043 4308628 .. 4308656 -  -3.6  -4.19238   CGGGCAAGCGCAAAA        CCGGGCGCATCC GCAAG GGCAACGCCTGG        GTCAGAAGGCTGCTG  65 446
    Ajs_4040 4304929 .. 4304944 - -10.4  -5.76237   CACAGAAACAAAAAA              GAGCGC CGAA GCGCTC               CTTTCCCGATGTGCA 100 54
    Ajs_4039 4303629 .. 4303643 -  -7.8  -3.55761   CAGCGACTGTGGAAA               CGGTAG GGC CCACCG               GGGTTGAAATGGAGG  60 385
    Ajs_4037 4302810 .. 4302863 -  -9.6  -2.62244   CTCTCGAAGAAAACT GC-CCGCCGCGTCAGGCACACACTCG CCCT CTAATGCGCGCATGA-GCGGCGATGC GCTGATCGTTCAATT  56 1
    Ajs_4036 NONE
    Ajs_4035 4301527 .. 4301545 -  -4.4  -4.11216   GCTGCATGCGGAAAA             CGCCGTGC AAT GCACCGCC             ACCGTGGAAACCGTA  62 358
    Ajs_4033 4299249 .. 4299265 -    -5  -2.73441   GACTACTGCTCAAAT              GGCTGC TGAGC GCGGCC              GCCCTGCTTTGCGTG  43 314
    Ajs_4029 4296821 .. 4296831 -  -6.8  -3.53012   GGGGCCTGGGTCAAA                 CGCA GCA TGCG                 GCCACCTTAGCCGGC  57 63
    Ajs_4028 4296473 .. 4296503 -  -5.3  -4.20707   TTTGAGCAAAAAACA       CCTCTAGCGCCCG ACCAA CAAGCGCCAGCAG       CTCCTGAATAAATAG  65 45
    Ajs_4025 4293644 .. 4293670 - -14.5   -4.7254   ATTCCGCAGCAAAAA        GCGCGCACTTCC TCAC GGAAG-GCGCGC         TTTTTCTTTAGGTCC 100 55
    Ajs_4018 NONE
    Ajs_4017 4278012 .. 4278022 -  -3.2  -2.78384   GTGCCGCCCATCAGA                 GCAC GCA ATGC                 TCAAGCGCCGGCAGC  40 10
    Ajs_4016 NONE
    Ajs_4015 4275176 .. 4275201 - -16.1  -2.54723   TGTGAAGACGAAGAC         GACGCGCGCCC GCAA GGGCCCGCGTC          TTTTTTTACGCCGGT  80 31
    Ajs_4013 4272653 .. 4272678 -  -5.4  -3.76224   CCGTGATGCAGGAAA        GCCGCCGCGCGC GCCT GCGC-CAG-GGC         GCCTTGAGCTGGGAG  60 335
    Ajs_4008 4264436 .. 4264456 - -12.5  -3.23853   GGCGGGGAAGGAATA            GGCGGGCAT GAC AGGCCCGCC            CACCGTCTCAGGCCA  73 33
    Ajs_4006 4262482 .. 4262493 -  -7.2  -3.78934   CTGCCCTCATAACAA                GGCC CGTG GGCC                 TACAGCTGGGACGGT  65 41
        secD NONE
        secF 4259464 .. 4259485 -  -3.7  -2.83903   TGGGCGAAAAATCCA           TAGGGCT CCGATATT AGCCCCA            GCCGCTGTCGCGCCC  44 88
    Ajs_4003 4256993 .. 4257009 -  -7.9  -3.66178   TCGTGCAATGCCAAA              CCGCGCA ATA CGCGCGA              TGGCTTCAGCGCCGC  62 126
    Ajs_4000 NONE
    Ajs_3999 4253837 .. 4253860 -  -2.3  -2.81625   ATCAATAACAGAGCA          TCCACGGGT CCCGTC AGCCGGGGA           TCTTTTCCAGGCAGT  39 15
    Ajs_3998 4252258 .. 4252294 -    -5  -4.36931   GAATCCACATCAAAA    TGGCCTCCAGCGCTTG CCCAT CAAGCGCGAGCAGCTA    TTTGATCGATAGCAT  68 56
    Ajs_3996 NONE
    Ajs_3995 4249217 .. 4249238 - -13.7  -4.05446   GCGTGGAATGACAAA           GGCCCGTCC ATGG GAACGGGCC            TTGCGTTGGGAACCT  90 72
    Ajs_3994 4247614 .. 4247631 -  -9.8  -3.61517   AGCGGTGGCCAAGAA             GCGCGC CGAGCT GCGCGC              GCTCAAGATCCCCTA  67 409
    Ajs_3990 NONE
    Ajs_3989 4242061 .. 4242097 -  -4.4  -4.87626   GTTTAAGAGGAAAAA    CAGCCTCTAGCGCTTA TGCAG CAAGCGCCAATAGCTA    TTTATTTAGGAGCAA  77 125
    Ajs_3988 4241378 .. 4241405 - -14.2  -4.84363   GCAAACCACGAAAAA        GCAGTGTGCCAC GGAG GCGACACACTGC         TTGAAAAATGATAGC 100 376
    Ajs_3985 4240044 .. 4240090 - -18.3  -3.66921   AAGGCTAACGTGAAA GCTC-AGCCGA-CGGCAAAAAGC GCA GCTTTTTGGCGGTCGGCTGGAGC GTGTTGTTAGCCATT 100 39
    Ajs_3984 4238969 .. 4238979 -  -2.4  -3.60627   TCAGTGGATGCCAAA                 GGCG GTC CGCT                 GGAAAGAAATGTTAG  49 46
    Ajs_3983 4238318 .. 4238341 -   -16  -3.28979   TAACAGACAAGGTAA          GCCG-CCCGCC TTT GGCGGGTCGGC          TTGACTGCTGGGTTA  88 95
    Ajs_3982 4238044 .. 4238059 -  -3.9  -3.18274   CTCATTTCAACCTAA              CGGCC AAGGTA AGCCG               CCCGCCGTAGGCGGG  47 6
    Ajs_3981 NONE
    Ajs_3980 4236192 .. 4236235 - -11.9  -3.42056   ATGCCTAACGTAGAA GT-CAC-CGG-CGCTGCGCG GCTTTAT CGCGCAGCGTCCGTGTGGAC TGCCGGGTTAGCTTT  74 33
    Ajs_3979 4235205 .. 4235218 -  -5.9  -3.45118   TGACGTCATAACGAA               CGCCC GGCG GAGCG                GACTGACCTTGCACT  55 377
    Ajs_3978 NONE
        fabG NONE
    Ajs_3976 4232631 .. 4232646 -  -7.5  -3.21099   GCTTTTGACCATGAA              CCGGC GCGCTG GCCGG               GGCGCGGCGCACGCC  56 182
    Ajs_3970 NONE
    Ajs_3969 4225069 .. 4225106 -  -9.9  -2.64144   TTTGCATCCAAACAG   CCCGCAGCGCTT-GCG TATCCAG CGCGAAGCGCTATGGG   TAGCGCAGCATTCAC  59 37
    Ajs_3968 4223893 .. 4223925 -  -5.4  -3.73995   CTTTGCATAAAAAAG      GCCTACAGCGCCCG CCCAT CAAGCGCTGACAGC      TATGCAAATAGGAGC  58 42
    Ajs_3967 NONE
    Ajs_3966 4222752 .. 4222770 -  -2.3   -4.7254   ATCTTCGAGCAAAAA            CCGTC-GC AAAG GCAGTCGG             GCTGAGCGCTGGCAG  72 127
    Ajs_3965 NONE
    Ajs_3964 4220640 .. 4220651 -  -2.2   -3.7282   CCAGGGCATCAAGAA                CCTGG CGC CC-GG                CTTCGACATCGAGGC  51 354
    Ajs_3962 4219400 .. 4219427 - -16.3  -4.27316   CTTCTGAAGGCAAAA        GGCCGCAGGAG TCAACG CCCCTGCGGCC         TTTTGCGCGTTGCAG 100 87
    Ajs_3958 NONE
    Ajs_3957 4212239 .. 4212249 -  -5.4  -3.05384   TTTCCGTGGATGTAA                 TCGA GTT TCGA                 TTTTTGCACAAAATC  47 71
    Ajs_3956 NONE
    Ajs_3955 4209485 .. 4209509 - -18.5  -5.28942   GAGGCCAAAGAAAAA          GCCCGGCGGCC ATG GGGCGCCGGGC          TTGGGAAAGCGTGGG 100 73
    Ajs_3954 4208228 .. 4208245 -  -5.5  -2.52623   TTGCGGGCAGAACAG             GGTCACG CACG CGTGACG              GCCCCCTCATGCGCC  45 10
    Ajs_3953 4207457 .. 4207476 -  -4.2  -3.53091   ACGCTCCTTCGGAAA            GGGGACCTT TAC ACGG-CCCC            AATTGACAGCTATTC  51 35
    Ajs_3952 NONE
    Ajs_3951 4205632 .. 4205664 - -11.1  -2.70932   GCGCGTCTGGAATTA      CCCTAGCGTGCCGGC CCC GCCGGCATGCGCGGA      TGCGGCACTACTCCA  63 33
    Ajs_3950 4203803 .. 4203819 - -13.7  -5.08824   GCCGGACGTAAAAAA              GCCGGGA TTA TCCCGGC              TGGGGGAATGCGAGA 100 69
    Ajs_3949 4202617 .. 4202629 -  -3.4  -3.90241   CATCAACCAGAACAA                GATC ATCAA GATC                TTCTCCGTGGCCAGC  58 418
    Ajs_3939 4193370 .. 4193399 - -13.5   -3.0792   CAACATCGGAGGCAA       CCCGTCGCGCCGC GCGG GCGGCACGACACG        TCTGCCGGTGGGCTG  75 78
    Ajs_3938 4192696 .. 4192723 - -11.2  -5.41143   GAGCCCCCAAAAAAA        GAGGCCAGCCCC GCAA GGAGCCGGCCTT         TCAAGCCTCGGAGAC 100 26
    Ajs_3931 NONE
    Ajs_3930 4185522 .. 4185540 - -14.6  -3.51976   AAGGCGCCAAACGAA             GCTGGGGT GCT ACCCCAGC             GAGGCTTGGCAACGC  83 271
    Ajs_3929 4183057 .. 4183089 -    -9  -3.38991   AGCCCTGGAACAAGA     CCGCCCCCGCGCCGC GCCT GCCGCGCGAGGT-GG      TGGAAAAGACCGCTG  63 132
    Ajs_3927 4181424 .. 4181440 - -10.8  -5.45652   ACTGGCAACAAAAAA              CCGCCC TGGCT GGGCGG              TTGCGGCACCGCCGG 100 77
    Ajs_3926 NONE
    Ajs_3925 4179900 .. 4179929 -  -5.6  -4.20367   TGCGCGAAGAAATAA       GAGCCCGGCGCCC TCAGG AGGCGCCGC-CCC       GCTCCATGGCGCGCC  67 9
    Ajs_3923 4178774 .. 4178827 -  -3.8  -3.46068   TTCGCAATCCAAACA GGGGGCGGTTCTGCT-GCGTCCAGCGC GAC ACGCTGCA-GCGAGC-GCACCGGCCGC TTTCAACGGCGCGGA  51 28
    Ajs_3922 NONE
    Ajs_3921 NONE
    Ajs_3920 4176729 .. 4176747 -  -7.4  -4.82901   GCGTTGCCATAAAAA             CAAGAGCT GCC AGCGCTTG             CCAGCTGGCGCTTTC  88 88
        leuS NONE
    Ajs_3916 4170672 .. 4170704 -  -3.3  -2.82942   TCTAGTAACAAATAT      GCCGCTAGCGCCC GTGCAGT AAGCGCAAACAGC      TATTAAATAAGGAGC  42 42
        holA 4169552 .. 4169583 -  -7.4  -3.33419   ACTCCTAAATCAATA      GCTGTCAGCGCTTAT CCC ATAAGCGCC-AGAGC      CATATTTCCTTGCGA  58 43
        proA NONE
        trkA NONE
    Ajs_3911 4164814 .. 4164826 -  -4.1  -2.71364   TGAGGTGGGGAACCA                TGAAG AGC CCTCA                AATGGGAGACGGAAA  42 78
    Ajs_3910 4163427 .. 4163449 -  -4.7  -3.60098   ACGGGGGATGCCAAA           GGAGCGCCA TTGTG CGCCGCCCC           CGCTTCGGGCACATA  55 95
    Ajs_3909 NONE
    Ajs_3908 NONE
    Ajs_3907 4158780 .. 4158811 -    -6  -4.87665   CTTCACTCATAAAAA      CG-GAATTGAAGTGA ACT TCACTTCTATTCTCA      TGAGCGTTTGATAGT  82 426
    Ajs_3904 4150081 .. 4150112 -  -9.4  -2.52623   CGCGCCTTACAAGAC      GCCGAAGCCCGCCAG GGG CTGGCGGGCTT-GTT      TTATTACCACCCTGA  56 134
        secE NONE
    Ajs_3902 4149068 .. 4149092 -  -7.8  -2.75535   CGAATACTTCAATGA          CGCTCAGGTC TTTTC GACCTGGGCA          AATTCCAGTTCCACC  52 4
        rplK NONE
        rplA 4147787 .. 4147822 - -11.3  -2.79796   TGTCAGCCCACCACA   TCAGACCT-GC-CGCCC TCAT GGGCGCACCAGGTCTGA    AGATTTCGCAATTAC  63 37
        rplJ NONE
        rplL 4146608 .. 4146637 - -16.5  -3.86944   CCCATAAGCACCAAA       GGCTGGAGGCCTT TTGC AAGACCCCCAGCC        CAGGAGACAAGGTCG  95 42
        rpoB 4142178 .. 4142207 -  -6.5  -3.48276   GCGCTTGCCACATAA       GGATTTGCAAG ACAAAACA CCTGCAAACCC        AGAGGGAGTGAGCGC  57 74
    Ajs_3896 4137821 .. 4137860 - -17.3  -5.36965   TAACACGACAAAAAA  GAA-ACTCCCGGCCTGCC GGATG GGCAAGCCGGGAGCGTTC  AGTACCCGCATGCGA 100 61
    Ajs_3895 NONE
    Ajs_3894 NONE
    Ajs_3893 NONE
    Ajs_3892 4132873 .. 4132887 -  -4.2  -3.54424   TGCCATGTGTGTAAA               TGCACC CTT GCTGCA               CGTGCGGTGTTGTTA  53 38
    Ajs_3891 4131997 .. 4132018 - -15.9  -5.38054   GTGCAGAAACAAAAA           CGCCCAACC GAGT GGTTGGGCG            TTGTATGTGGTGGCC 100 172
    Ajs_3890 4130892 .. 4130907 - -10.4  -5.00616   GGGTTTCGCAAAAAA              GCAGCC TCCG GGCTGC               TTTTTTTATACCCGA 100 69
    Ajs_3888 NONE
    Ajs_3887 4127945 .. 4127957 -  -7.7  -4.13014   GCTAGAGGCCCAAAA                GGCTT ATA AAGCC                CCGTCCGGCGCGACG  72 16
    Ajs_3881 NONE
    Ajs_3880 4120256 .. 4120268 -  -6.2  -4.32034   GCAGGAGCAGGAAAA                GGCC GTGGT GGCC                GACAAGAAGCTGCTG  73 524
    Ajs_3878 4117551 .. 4117573 -  -9.8   -2.5294   CACGCCCGAGAAGAC           CCACGCGCAG ATC CTGCGCATCG           CGCAGAGCACCGCCG  56 367
    Ajs_3876 NONE
    Ajs_3875 NONE
    Ajs_3874 NONE
    Ajs_3873 4114271 .. 4114302 -  -7.4  -2.75074   GCTATTGGAATAGTA      GCTGCTCGCGCTT GATGGAT AAGCGCAAG-AGC      CCATTTTTGCTTAAA  52 36
    Ajs_3872 4113020 .. 4113059 -  -7.1  -3.30124   GTGCATCTTCGACAA CACGGCCAGCGGCG-CGGC GGCT GCCAACGC-GCTGGACCTG  CACCAGGCCTGCGCC  55 40
    Ajs_3869 4110451 .. 4110474 - -16.8  -2.75992   CTTGATTCAATAGCA          CAACGGGTCC CGCG GGACCCGTTG           TTTCTGGTGTCAGTC  81 35
    Ajs_3864 4104882 .. 4104912 -    -9  -2.66272   TTTTAGCCAAATCGA       CACCTAGCGCAG TCCCATC CTGCGCCAAGCG       CTCTCATTTTTGAAC  56 29
    Ajs_3859 NONE
    Ajs_3855 4092691 .. 4092712 -  -4.3  -4.05004   CCAGTACAACAAGAA           CACCACGCT GGCC AGCGCCGCG            GTGCTGCAGGACTTT  62 230
    Ajs_3852 4088738 .. 4088762 -  -5.5  -3.51365   GCACACGGGACACAA          CGTGCTGCTGG TCT CCAGCGGCGGG          CCCATCGCCGCCGCC  54 280
    Ajs_3842 4077727 .. 4077762 -  -6.1  -3.69216   GCGCTACGTAAAAGA    GAGCTGCTTGCGCTTG CCCAT CAAGCGCTT-CAGCCC    GATTGGACCACTCTC  60 19
    Ajs_3826 NONE
    Ajs_3825 NONE
    Ajs_3824 4059265 .. 4059307 -  -3.5  -5.18357   GAACCCATCAAAAAA GA-TAGCTGCCAG-CGCTTAT CCC ATAAGCCTCAGGCAGCAACTC GGGCTAAAAGTCACC  82 36
    Ajs_3814 4048284 .. 4048303 - -10.7  -5.60993   TCGTCCATAAAAAAA            CCCACGG CATATT CCGTGGG             TTTTTGCCCGACCGC 100 67
    Ajs_3813 4047183 .. 4047202 - -10.7  -5.60993   TCGTCCATAAAAAAA            CCCACGG CATATT CCGTGGG             TTTTTGCCCGACCGC 100 67
    Ajs_3812 4046047 .. 4046079 -  -8.3  -5.32396   ACAGCAAAAACAAAA      TGCCGGAATGCCGCG CAA CACGGCACCCAGCCA      AGCCGATTACCCCGA 100 89
    Ajs_3811 4044486 .. 4044503 -    -2  -2.63596   TTTCACGGTACAGGA             CAACTA TGTGTT TAGTCG              AAGCATTTAATTGTT  38 32
    Ajs_3810 NONE
    Ajs_3809 4043548 .. 4043570 - -11.3  -5.36441   TTCGCATATAAAAAA          GCCGGCCACC TTGC GGTG-CCGGC           TTTTTGCGTTGCCCC 100 95
    Ajs_3807 NONE
    Ajs_3806 NONE
    Ajs_3805 NONE
    Ajs_3804 NONE
    Ajs_3803 NONE
    Ajs_3802 4036214 .. 4036240 -  -3.6  -3.66772   CGAAAGCCCGAATAA         GCGCCCAAAACC CGG GTTTTCAGCCGC         ATGCGCCCCGATGCG  51 94
    Ajs_3801 NONE
    Ajs_3800 NONE
    Ajs_3799 NONE
    Ajs_3798 NONE
        fliP NONE
    Ajs_3796 NONE
    Ajs_3795 4031791 .. 4031805 -  -2.8  -4.25104   CGGTTGGTATGAAAA               CAATAG CTG CTACCG               CTTGATGCACAAGCA  64 106
    Ajs_3792 4029450 .. 4029465 -  -6.8  -3.40403   GCGCCTGGATCAGAA              CAGCTC GATC GAGCCG               GCCTCCATCTCGCTT  57 4
    Ajs_3791 NONE
    Ajs_3790 4026832 .. 4026852 -  -8.9  -2.52464   GCGTTTCGCAATTCA            GTGGCGCGC ACG GCGCACCAG            GGCAGCCGTGTCCAG  53 2
    Ajs_3789 NONE
    Ajs_3788 4025358 .. 4025376 -    -3   -3.3692   CGGTAGGTCAAAAAT             GCCCGCAT CAG ATGCGTTC             GTACACCGTCTTGCC  46 14
    Ajs_3787 NONE
    Ajs_3786 4023215 .. 4023227 -  -3.3  -5.64274   GCAGCTACAAAAAAA                GAAGC TAA GCTAC                AAGGAGCAGCGCGAA  95 236
    Ajs_3782 NONE
    Ajs_3780 4012591 .. 4012604 -  -5.3  -3.36991   CAGGACGCGCAAATA               TTACG TTTA CGTAA                ACGTCAATTATCCAC  50 29
    Ajs_3779 4011266 .. 4011287 -  -2.1  -3.33696   CTTGCTGTGAATGAA           TGAGCAGCG TCGG CGCGGGCCA            TCAGCAGGTTTCGGC  45 26
    Ajs_3778 4010549 .. 4010563 -    -7  -3.28791   ACCGTGCCTGCAGAA               CCGCGC GCA GTGCGG               TGCGCCCTATTGGCG  55 32
        aceK NONE
    Ajs_3776 4007476 .. 4007503 - -14.8  -5.53991   CAGCTATTAAAAAAA        GAGCGCCACTGC GTGT GCAGGGGCGCCC         ATGGCTGGCGGGTCA 100 38
    Ajs_3775 NONE
    Ajs_3774 4005569 .. 4005584 -  -4.6  -3.11812   ATTTATAGCATTCAA              GCCAGC GCGC GCTGGA               TGATGATCTTTTGTA  48 6
    Ajs_3773 4004623 .. 4004656 -  -9.5  -3.64822   ATTGCCGCACTGAAA     GCCGCGAAC-CTGCCG CGC CAGCAGCGCCCGCCGC     AGACGCGTCAAAGGC  68 201
    Ajs_3771 4001776 .. 4001790 -  -5.6   -5.4505   TCCTTGAAGAAAAAA               CGGGAA ACT CCCCCG               AGTGTGCGTGTGCGC 100 292
    Ajs_3770 4000988 .. 4001019 - -14.6  -3.57185   GCTATTTAAATAATA      GCTTCTGGCGCTTAC CAG ATAAGCGCCAGA-GC      CCGATTTGGCTCAAA  85 64
    Ajs_3766 3995577 .. 3995587 -    -4  -4.18018   CTTGCCCAGCGAAAA                 TTCA CCA TGAA                 ACTCAGCCGATCGAC  63 331
    Ajs_3764 NONE
    Ajs_3763 NONE
    Ajs_3762 NONE
    Ajs_3761 NONE
    Ajs_3760 NONE
    Ajs_3759 NONE
    Ajs_3758 NONE
    Ajs_3757 3984925 .. 3984950 -  -8.2  -2.83271   GCAGGCGCACAAGGA         CGCGGCGCAGC ACCCG GCAGCGCCG-G         CTCTGCCGTTGGCCT  55 57
    Ajs_3755 NONE
    Ajs_3754 NONE
    Ajs_3753 3981626 .. 3981653 - -18.5  -4.65895   GGTCCCATGCAAAAA        GGCGCCGCAGA ACGCTG TCTGCGGCGCC         TTGGAACGCCTGCCG 100 73
    Ajs_3752 3979549 .. 3979571 -  -2.7  -3.80535   AACCCTGACAAAAGA          GCGGAACGAC GTCA GTCGTTG-GC           GTAGATGTCCACGTC  52 14
    Ajs_3751 3978221 .. 3978242 - -14.5   -5.5112   GGCACCAATAAAAAA           GCCTCACAC CATC GTGTGAGGC            CTGTCTGATCGCAAG 100 94
    Ajs_3750 3977961 .. 3977979 -   -16  -4.18018   CCGCCCCATCCAAAA             CGCGGAGC CTG GCTCCGCG             TTTTGGATGGGTGGG 100 47
    Ajs_3747 3969493 .. 3969509 -  -5.8  -3.89346   GTTCGATCCTAGAAA             GCGCGCC CAGG GGCG-GC              GTGTGAGCCACGCAC  62 75
    Ajs_3746 3968819 .. 3968848 - -11.3  -5.04987   AACACGCGCAAAAAA       GAGCCCCGGCGCCG TAG CGG-GCCGGGGCAA       ACCCCGTAGTAGGGG 100 89
    Ajs_3745 NONE
    Ajs_3744 NONE
    Ajs_3743 3965955 .. 3965970 -  -3.9  -3.53012   GCTTCTCCGTGGAAA              GCGAC GGTAAG GCCGC               GGACAGGCGCGGCGG  51 117
    Ajs_3742 3964999 .. 3965023 - -10.7   -4.3208   CTTTACAACGCAAAA          GCCCCTGCC GGATGTT GACAGGGGC          TTGTGAAGCGAAGGT  89 58
    Ajs_3741 3964571 .. 3964596 - -11.8  -2.72799   GCGCCAGAGACAGCA         GCGACCGGCG GTTGAT CGCCGGTCGG          GTTCAGCGCGGCCCC  66 28
    Ajs_3739 3961359 .. 3961371 -  -3.3  -3.51032   ACCTTTGAATGACAA                GCGCT GGC AGCTC                CTGTTTTTGATAATC  49 51
    Ajs_3738 NONE
    Ajs_3737 NONE
    Ajs_3736 3957673 .. 3957700 -  -9.9  -2.68823   GGGGCTCCAGAGAAC        CGCCTCA-GGCC GCCAG GGCCATGAAGCG        CTGCAGGTGGTGGTC  60 2
    Ajs_3735 3956741 .. 3956753 -  -9.1   -2.5031   CAATACGAAAATCAG                TGCGC GCC GCGCA                GTTTCGTGTAGTCGG  56 9
    Ajs_3734 3955417 .. 3955451 -  -4.9  -5.55769   TCCTAGAATAAAAAA     TGGTTCCAGCGCTTA CCCAT CAAGCGCTGGCAGCT     ATCTTTTAGATAGCT 100 40
    Ajs_3733 NONE
    Ajs_3732 NONE
    Ajs_3731 NONE
    Ajs_3730 3951644 .. 3951686 - -21.3  -3.03203   TGAGGAAGAACGAGA GGTGCGATCCCGCACGGCAC CCCA GTGCCGTGCGGGTGCGC-CC GGTTACAACCGAGAG 100 28
    Ajs_3728 3949697 .. 3949719 - -10.4  -3.50853   CGGCGGCAACTACAA           CGCCCCGGCG CAG CGCGTGGGCG           ATTTTCTGGCGCGCC  67 444
    Ajs_3722 3943217 .. 3943253 - -18.1  -5.00616   GCGCTCCTGAAAAAA    GAGCTGCCAGCGCTTGA TTG TCAAGGGCTGGCAGCTG    TTTTGGCATAAAAGT 100 430
    Ajs_3717 NONE
    Ajs_3716 3936025 .. 3936039 -  -5.6  -2.56596   TGGCGCAGCAACCCA               TGGCTC ATC GCGCCA               GCTCCAAAGCATGTG  46 15
    Ajs_3715 3935224 .. 3935268 - -16.3  -3.65522   GAGGCATCGCAAGAA CCAGCGCCCGCGCCGGCGCC GCAGGG GGCGCCCGTGCGGGTGC-GG CATTTCGCGGTGAAC  88 358
    Ajs_3710 3930218 .. 3930260 -    -7  -3.64703   GCCGCTTCAGCCAAA GCCGCG-CAGTGGCGCT GGACATGGAA AGCGCCACCATCGCCGC CAACGGTTTTCGCTT  61 324
    Ajs_3707 NONE
    Ajs_3706 NONE
    Ajs_3705 3923502 .. 3923530 -  -4.3  -3.53012   CCCTCGGCTCTGAAA        GCCGGCGCAGGCA TGC TGGCGGTGGCGGC        CTACGGGGGCTATTT  52 365
        ruvA NONE
    Ajs_3699 3917792 .. 3917810 - -14.6  -3.51976   AAGGCGCCAAACGAA             GCTGGGGT GCT ACCCCAGC             GAGGCTTGGCAACGC  83 202
        ruvB 3910227 .. 3910239 -  -2.6  -3.14132   GCTGCTGGCCACCAA                CCGC TTCGT GCAG                CCGCTGCCCTTGTCG  42 177
        dapF NONE
    Ajs_3687 NONE
    Ajs_3686 NONE
    Ajs_3685 3901209 .. 3901229 - -11.8  -4.35926   AGTGCAAACGCAAAA            CGGCGGCC TGGAC GACCGCCG            CATGGGAATCGAATT  91 81
    Ajs_3684 3900076 .. 3900092 -  -4.3  -2.62184   TCGGGTCTCACACCA              GGCACTG CTC CAGCCCC              TGTTGCAGGATGTCC  41 1
    Ajs_3683 3899156 .. 3899178 -  -3.2  -2.79878   CTCATGGATGCAAAT           GGGCGTGCGC AGT GCGGACGTCT           CGCGGCAATCGACCG  40 46
    Ajs_3682 3897325 .. 3897335 -  -8.2  -3.36515   CCGGAGTGGCAAATA                 GCCG GTG CGGC                 CTCAGTTCTTGCGGG  60 27
    Ajs_3681 3896633 .. 3896671 -  -7.3  -3.68351   TCTTTATGAGTCAAA   GGAGCCGCTAGCGCTTG ATAGA CCAGCGCAAACAGCTAC   AAAAAAGATAGCCCA  65 52
        hslU 3895147 .. 3895189 - -10.1  -3.61468   TTGCAATGAAATCAA GGAC-TTAGCGCCGATTTCCA AGG TGAAAATCGG-GCAAATGTCC TTATTGATTAAGCAC  70 98
    Ajs_3679 NONE
        mraW 3893559 .. 3893590 -  -5.1  -2.72379   GCAACGCTTGAAGGA     CTGTGCCGCGGAGCG AGCG CGCCCCGCG-CAT-G      CGCGTGCAGCGGCGT  44 67
    Ajs_3677 NONE
    Ajs_3676 NONE
        murE NONE
    Ajs_3674 NONE
        mraY 3887129 .. 3887147 -  -5.8  -3.14344   GATGCGCGCCACGAA             CTCGGCAG CGG CGGCCGCG             GCTGACACCGCGGGT  51 237
        murD 3885442 .. 3885483 -  -9.3  -2.57211   ATGCGCTGCCACAAC GAGGGACGGGAAG-CGGCGG TCG CGGCGGTCATGCCGTCCCTC CTTCCAGCGTCTGGC  56 12
    Ajs_3671 3884169 .. 3884211 -  -7.7  -3.31461   GACGCACTGCCACAA GC-CCGAGGCGGTGAATAAG GTTC CTCATGCACGGCCTCCGCGC ATGAGCAGCTTGTTT  58 7
        murG NONE
        murC NONE
         ddl NONE
    Ajs_3667 NONE
    Ajs_3666 NONE
    Ajs_3665 3876945 .. 3876964 -   -15  -4.80882   ACCGCACATGAAAAA            GCCGCTGG CACG CCAGCGGC             TTTTTCATTCAGGCA 100 66
        lpxC 3873961 .. 3873979 -    -3  -3.25341   ATCGGAAGATCAACA             TGCACGCG TCC CCCGTCCA             TTACCAGGCACGCAC  46 26
    Ajs_3662 3873759 .. 3873773 -  -5.6  -2.78384   GCGGGGCCGAGTATA               GGCGAC TTG ACCGCC               AGCAAGGTGCCTTAC  46 37
    Ajs_3661 3871491 .. 3871515 -  -5.7  -3.42996   GATGACCCAGCAGAA         CGCGG-CCCT GGTGGA AGAGTCCGCG          GCCGCCACCGAGAGC  53 206
    Ajs_3659 3867859 .. 3867878 -   -15   -3.7732   GCTGCAGATGAAGAA            GGCCGTGG TAGG CCACGGCC             GCGCGGCCAAGTCGC  87 259
    Ajs_3653 NONE
    Ajs_3652 3861244 .. 3861263 -  -3.4  -3.14881   CAATCCGCCCACCAA            TGCCCAGG CCCG CCTGCGCC             CACCCGCCTGGACTC  44 44
    Ajs_3651 3860658 .. 3860690 -  -9.8  -4.11216   GCGCCATCGCCAAAA     CCGCCA-GCGGCGTG AAAT CAGGACGCATGGCGG      GGTGGTGGTGCAAAG  81 69
    Ajs_3650 3859043 .. 3859079 - -11.6  -2.53263   GCTACCCGCAAGCCA   CCCAGCGCGTACT-GCC CGGC GGCGACCACGCGCTGAG    CGACTTCGCCCCGCA  61 78
    Ajs_3647 NONE
    Ajs_3646 3853335 .. 3853356 -  -2.1  -3.50393   GGGCATGGCACACAA           CCGGCC-GCG GCG CTCAGGCCGT           GCCGCCCACCGTCAG  47 17
    Ajs_3645 3852585 .. 3852609 -  -7.8  -5.62045   ACAGATAACAAAAAA         CCGCCG-GGCT TTTC AGCTTCGGCGG          TTTCTTAGAGAAGGG 100 193
    Ajs_3644 NONE
    Ajs_3643 3850950 .. 3850982 - -12.1  -3.73084   ACTATCAAAACAATA      GCTGCTATCGCTT GATTAAT AAGCGCTAGCAGC      CTTTTTGGCTTGAAA  78 42
    Ajs_3641 NONE
    Ajs_3640 3848000 .. 3848017 -  -3.3  -2.72144   TGAGTTTTCGCAAAT             CCATGGG GGCT CCAACGG              CTAGAAACGGAATGG  40 122
    Ajs_3639 3847464 .. 3847516 -  -5.4  -4.99035   GCATGCAGACAAAAA CCCG-CGCCAGCGCCTGGTGCTGC CATGCAT GC-GCAACGAGCGCATGCGGCGGG GGCTGAAGCGCTCAT  83 48
    Ajs_3638 3846027 .. 3846052 - -19.1  -5.53991   GATCCATGAAAAAAA         GCTGGCATCCG TTTC CGGATGCCAGC          GGGCAGGTCAGAAGT 100 49
        prmA NONE
    Ajs_3636 NONE
    Ajs_3635 3842369 .. 3842381 -  -9.1  -4.56597   CGCTCCTGCCAAAAA                GGCTG TAG CAGCC                AAGAAGGCAGCACCC  84 432
    Ajs_3626 3830506 .. 3830560 -  -7.3  -3.33315   GGAAGACTTCCAGAA GATGATGAAGCTGATCGACGATGTGCG CTT CG-ACAAC-TCCTTCAGCTTCATCTTC AGCCCGCGCCCCGGC  54 483
    Ajs_3619 3823054 .. 3823082 - -13.7  -3.07816   GGGGTATGCAGCGAA        GCGCGCGCGGGCC AAT GCCCCGCAGGCGC        TCCCCTCGCCGGGCG  75 58
    Ajs_3618 3821808 .. 3821839 - -20.4  -3.73953   AGCAGCGCTATGAAA      CAATAAAACCGCGC AACT GCGCGGTTTTATTG       GGGGTTTTCATGCTT 100 82
    Ajs_3617 NONE
    Ajs_3616 3819517 .. 3819541 -  -4.3  -3.54424   CTTCAGTCTGGCAAA         GTC-GCCAGA GGGTTG TCCGGCTGAC          GGCAATTTTGTCGCA  53 204
    Ajs_3615 NONE
    Ajs_3614 NONE
    Ajs_3613 NONE
    Ajs_3612 NONE
    Ajs_3611 NONE
    Ajs_3610 NONE
    Ajs_3609 NONE
    Ajs_3608 NONE
    Ajs_3607 NONE
    Ajs_3606 NONE
    Ajs_3605 NONE
    Ajs_3604 NONE
    Ajs_3603 3800609 .. 3800619 -  -2.4  -2.64155   TTCTGGCGAAATCGA                 GCCC AGC GGCC                 ACATTCTTTGTGCTC  38 252
    Ajs_3602 NONE
    Ajs_3601 NONE
    Ajs_3600 NONE
    Ajs_3599 3794621 .. 3794640 -  -7.2  -3.15544   GCTGATCCGCATGAA            GATCGA-GC CGG GCGTCGATC            AGGCCCTTGATCTGG  56 328
    Ajs_3598 3792339 .. 3792349 -  -3.2  -3.57144   CGGGTGAGCTGCAAA                 TCCG TCC CGAA                 GTGGATGCCGCGCTG  49 219
    Ajs_3594 NONE
    Ajs_3593 3788536 .. 3788557 -  -3.7  -3.04144   TGCTGACCTGGAAGA           GCTTTTCCA TCAC TGGCAAAAC            CAGTGGCCAGGTTCG  44 364
    Ajs_3590 3786888 .. 3786901 -  -3.1  -4.39166   GTCGAGAGATGAAAA               GTCAC TTTT ATGAC                CCTTAACGCGTAAGA  67 161
    Ajs_3589 NONE
    Ajs_3588 3785308 .. 3785319 -  -4.4  -4.20516   TTTGTACTCAAGAAA                CTCA GCAT TGAG                 TACGTTCAACCGTGA  63 67
    Ajs_3586 NONE
    Ajs_3585 3783053 .. 3783069 -  -6.5  -2.94679   AGCAACGTCAAAGCA              GCTTGTG CTC CACCAGC              TTCTTGCGCAGCGTG  50 1
        purH NONE
    Ajs_3583 3780871 .. 3780887 -  -9.5  -3.07233   CGATAAGCGCTAACA              GCTATTG ATT CAATAGC              GCACCACCCCCTCGG  60 18
    Ajs_3579 3776324 .. 3776340 -  -5.8  -4.72473   GGAACGAAAAAACAA             CGCTGGC AGGA GCC-GCG              CCTCAAATCTCGACC  80 28
    Ajs_3578 NONE
    Ajs_3577 NONE
    Ajs_3576 NONE
    Ajs_3575 NONE
    Ajs_3574 3766506 .. 3766544 - -15.9  -4.52589   CCCCGGCACACAAAA   GACAAGGCCCGGCAGGC GTGCA GCCTGCCGGGCCTGGGT   GACACTGGACTGCGT 100 46
    Ajs_3573 NONE
    Ajs_3572 NONE
    Ajs_3571 NONE
        pyrB 3763835 .. 3763848 -  -8.1  -3.75665   CCACACCCCATGAAA               CTGGG GCAA CCCAG                GTCAGGGCCACCGTG  69 105
    Ajs_3569 NONE
    Ajs_3568 3761603 .. 3761615 -  -5.5  -3.41569   CGATGGATGTAAACA                GACCG TTA CAGTC                CCGTTGCACACACAT  55 70
    Ajs_3567 3760063 .. 3760082 -    -7  -2.82516   TGGTGCATGACGACA            GCTCACCC GTGC GGGCGCGC             ATCGTGCGCAAGGCC  50 246
    Ajs_3565 3757293 .. 3757320 -  -4.6  -2.70932   CTCGGTGTCCAATGA        GGCGGCGCCGGG TCAG CGCGACGACGCG         CGCAGCGTGCGGCTC  44 10
    Ajs_3564 3756732 .. 3756780 -  -9.7  -2.78463   ATGCCGCCCAGCATA TCGGCCCGGCGCCGCGCGCGACTGT AGG AAAG-CG-GCGCGGCGCCAGG--GA ATGGGTCTTTTTGCT  57 125
    Ajs_3563 3754874 .. 3754904 -  -7.4  -3.63744   GCTCTCCTTAAAACA       GTGGTGGACGCACG CTG CGTGCGCCCGATAC       CCCCGTTGTAGTGTG  62 267
    Ajs_3562 3754356 .. 3754374 - -10.2  -4.44284   AACTCAATAGCAAAA             GGGCGGCA TGG CACCGCCC             TTACAATCTTGCCTC  95 144
    Ajs_3555 3744411 .. 3744424 -  -9.5  -5.40072   CCGGGCGTAAAAAAA               CCCGC GTTG GCGGG                CTTCTTCGGGTGCGT 100 48
    Ajs_3554 3742748 .. 3742794 - -12.9  -2.73681   CACGCATGCCAAGCA GCAGGCCGGCCAGCCCATGGA GGCCA TCGAGACGCTGGCCGGCCTGT GGATCGCGGAGCACC  67 315
    Ajs_3550 NONE
    Ajs_3549 3739907 .. 3739946 -  -3.5  -5.27779   GGGAATATCAAAAAA  GTGAGCTGCCAGCGCTTG TCCAT CAAGCGCTGG-AGGCCGT  TTTGGTACTTATTGC  85 34
    Ajs_3548 NONE
    Ajs_3547 3737793 .. 3737818 -  -5.3  -2.57489   GATGAATGGAAGGGA         GCGGCGTG-GGC AGC GCAGCAAGCCGC         ACTGCATCGCTACCT  43 47
    Ajs_3546 3736642 .. 3736678 - -19.6  -4.77165   GGCTCCATAACAAAA    GAGCCTGTAGCGCCTG TCCAT CAAGCGCTACAAGCTC    TCGTATCAATAGCAG 100 106
    Ajs_3544 3733781 .. 3733796 -  -3.9  -4.96646   CCACATAAGCAAAAA              CAGGC CTTAGC GCCCG               ACCATCAAGCGCCAA  81 70
    Ajs_3543 NONE
    Ajs_3542 3732081 .. 3732101 -  -5.3  -3.01712   GCCTGGCCGCCAATA            CCGGCTGCA TGC TGCATCTGG            TGGAACCGCTGGGCT  47 450
    Ajs_3539 3730075 .. 3730112 - -14.1  -3.93583   GAAGTGACGCAGAAA   GGAGGCCTGAGAGCGCC GCGT GGCGCCATCAGAACTCC    AGAAGACGCGACGCC  84 158
    Ajs_3537 NONE
    Ajs_3536 NONE
    Ajs_3535 NONE
    Ajs_3534 NONE
    Ajs_3533 NONE
    Ajs_3532 3725038 .. 3725051 -  -9.5  -5.40072   CTCCGCGTAAAAAAA               GCGCC TTGC GGCGC                TTTTTCCCGATCCGG 100 49
    Ajs_3530 NONE
    Ajs_3529 NONE
    Ajs_3528 NONE
    Ajs_3527 3721085 .. 3721098 -  -4.5  -2.62184   GCTTGCTTCACAGGA               GGTAG TGGT CCACC                AGCAGCGCCGCGAAC  41 4
    Ajs_3526 3720394 .. 3720406 -  -4.7  -2.54523   GCACACGTCAATTCA                GGCCC TAC GGGCA                ATGTGGTTTTTGCCA  43 75
    Ajs_3525 3718238 .. 3718292 - -12.7  -2.52516   TGGCGCAGGAGCAAG GCGTGCTGCGGCGCGACCGCTGGCACT GCG AGATCCAGCG--CGCGCCGCTGCTGGC GCTCACGCGCGGCGG  63 150
    Ajs_3521 3714500 .. 3714517 -  -7.7  -3.31248   CAACACCGGCCAGAA             CGC-CCTG GCG CAGGTGCG             CGCGTTCGACGACGC  56 266
    Ajs_3519 3712083 .. 3712099 -  -9.3  -2.52464   CCTTGGCTCAATGCA              CGCGGCC ACC GGCAGCG              TCGGGTGCTGGGGCG  56 1
    Ajs_3518 NONE
    Ajs_3517 NONE
        coaD 3709395 .. 3709426 -  -8.6  -2.62184   GCGCTTCGTACACGA      CACCGTGGCGCG GCGCTGAT CACGCCGCGGCG       GTGCGGCCCAGCTTG  53 13
    Ajs_3509 3704284 .. 3704316 - -26.5   -3.8709   AAACCTCTGCACAAA      GCACAAGGGCCAGTC AGT GACTGGCCCTTGTGC      TTTGTGCGCTTTGCG 100 42
    Ajs_3504 NONE
    Ajs_3503 3699709 .. 3699738 - -17.9  -4.64861   TTCGGTCAAAACAAA       GCCCGCC-CGGGAG AGG CTCCCGCAGCGGGC       AACATGGGGCGCATT 100 68
    Ajs_3502 NONE
        gpsA 3698116 .. 3698131 - -11.8  -4.91109   CGCGCACGACAAAAA              GCGGCC TGCG GGCCGC               TTTTTGCTGTTCACG 100 56
    Ajs_3498 NONE
    Ajs_3497 3693875 .. 3693906 -  -3.7  -2.83504   TGGGCATGAAAACAG      GCCG-TAGCGCTTA TCCAT CAAGCGCAAACAGC      TACTCAATTTATAGC  44 55
    Ajs_3496 3691759 .. 3691784 -  -8.3  -5.08015   AACGTAAAAAAGAAA         CCGCTGTG-CTC TGA GAGTCATAGCGG         TTGGGGTGCCCGCCC  93 308
    Ajs_3490 3687486 .. 3687514 -  -5.8  -2.70932   GGGCGGCTCCAAGGA        GGCGGCCCAGGA TCGGC TCAAGGGCCGTC        GTGCAGCTTCTCGGT  46 14
    Ajs_3489 3686573 .. 3686589 - -15.1  -4.20516   GCCCCACGCAAGAAA              GCCCCGC ACC GCGGGGC              TTTCTTTATATGAAT 100 103
    Ajs_3485 3680765 .. 3680819 -    -2  -3.44998   GACCGACGAAGAAGA CCACAGCGGCATCACCGTCCGCTACC GCGAA GGCGGCGCACCGC-A-GCCGCTGCCG GATGCCCCGCCGCAG  46 125
    Ajs_3479 NONE
    Ajs_3478 3673272 .. 3673304 -  -2.7  -3.38046   TGCCCAGCGGAAACA     CCGC-GCCCCAGTAC AGCGG GT-CTAGCGCAGCGG     AAAGCGGCGCACGCC  45 14
    Ajs_3477 NONE
    Ajs_3476 3671913 .. 3671931 -  -3.1  -4.03234   CTTCTCGCACACAAA             TCACCGC TGACG GCAGTAA             TCAGGTGTTCTTGCT  58 26
    Ajs_3475 3671604 .. 3671622 -  -4.5  -3.32354   CGTCGAAATCAAAAC             TTGGGGC CTTGT GCGCCAA             CAAGGTATCGGTGCC  48 43
    Ajs_3474 NONE
    Ajs_3473 NONE
    Ajs_3472 3669724 .. 3669738 -  -2.1  -3.89346   CGGCGATGTCATAAA              GCATCG GCCC CG-TGC               TGGCGCAAAAGCTGG  54 4
    Ajs_3471 NONE
    Ajs_3470 NONE
    Ajs_3469 NONE
    Ajs_3468 NONE
    Ajs_3467 NONE
    Ajs_3466 3660837 .. 3660857 -  -3.1  -5.28315   AGAAAACGGAAAAAA            TCGCGGCGT ATG AAGCCGCAT            TCATACAGTCTATGA  85 141
    Ajs_3464 NONE
    Ajs_3463 NONE
    Ajs_3462 NONE
    Ajs_3461 NONE
    Ajs_3460 3655032 .. 3655060 - -23.1  -2.77182   GCGTACACGTAACGA        CGCCCCGGCGCGC AGA GCGCGGCGGGGCG        TGCAGGACATAGCGG 100 91
    Ajs_3459 NONE
    Ajs_3458 NONE
    Ajs_3457 3651210 .. 3651223 -  -8.1  -3.05844   GCCTCCAGCGCAATA               CCAGC AAGC GCTGG                CAGCTATCAAAATCA  57 38
    Ajs_3456 NONE
    Ajs_3455 NONE
    Ajs_3454 3648706 .. 3648722 -  -9.5  -3.07233   CCACAAGCGCCAATA              GCTATTG AAT CAATAGC              TATTTCAACCGCCGC  60 30
    Ajs_3453 3646449 .. 3646478 - -17.1  -4.48987   GTTTTAGAAGCAAAA       GGCCCACGGGGGC GTGC ACCACCGTGGGCC        CGCCCCCGTGCGAGG 100 54
    Ajs_3449 NONE
        ispH 3642158 .. 3642172 -  -4.2  -4.04141   CAATAATGAAGCAAA               GCTGTC GCA GACAGG               GTTCGTGCAGCCCCG  61 74
    Ajs_3447 3640148 .. 3640165 -  -4.7  -3.57263   ACGGCGACGCCCAAA             CCCCTGC GCCT GCTGGAG              GCCGTATCGGCCTAT  52 509
    Ajs_3445 3638351 .. 3638367 -  -7.2  -4.39571   TGTAGAAATGCAAAA              CGGGCC ACTCG GGCCCA              TCTGATATGAATACT  81 162
    Ajs_3442 3636328 .. 3636356 -    -3  -5.18643   CCAAGCAAAACAAAA        TGGCCGCAACCA AGTGG TGATGGCAGCCT        GAGAAGCTCTTCAGT  82 36
    Ajs_3436 NONE
    Ajs_3435 NONE
    Ajs_3434 NONE
    Ajs_3433 3625145 .. 3625178 -  -5.9  -4.08216   CGAGCGCTTTGAAAA     GCAGCTCGATGGCATC CTC GATGCGGGCG-GCTGC     CCGCTGGAGCCCACT  66 255
    Ajs_3430 3621727 .. 3621744 - -14.1  -2.74461   TATGGATGGCGAAAG             GCGCGGC ACAG GCCGCGC              TTTTTTTGTCCCGAC  72 77
    Ajs_3426 3618872 .. 3618910 -  -8.7  -3.55444   CGCGCACCCTCGAAA  CCCCCAAGCCCACG-GCG TCCG CGCGCGCGTACCAGGGGG   TGCGCAGCCCCATTT  62 321
    Ajs_3422 3614563 .. 3614617 - -12.1  -3.06831   GGAATTTGCATGGAA GCGCGATTG-TGTCATCGACCCGGGCC CGC GGCGCGGGCCCAGGGCAGCAA-CGCGC GGCGGCCTCAGCGCA  68 104
    Ajs_3421 NONE
    Ajs_3420 3612595 .. 3612627 - -10.5  -3.43007   ACTATTGAAAATATA      GCTGCCAGCGCTTAC CCA ACAAGCGCTGGAGGC      CGTTTTAGCTCAAAA  68 30
    Ajs_3418 3611757 .. 3611792 -  -3.1  -2.93701   TTGACGAAAAAAACG    GTACCTCTGCGCAGC GACGCG GCCGCTCAGGGGCAG     AAGATGTCCTTGAGC  42 16
    Ajs_3417 NONE
    Ajs_3416 NONE
    Ajs_3415 NONE
    Ajs_3414 NONE
    Ajs_3413 NONE
    Ajs_3412 NONE
    Ajs_3411 3604982 .. 3605000 - -13.1  -5.64274   CCACGCATAAAAAAA             GCGCCCC GGAAA GGGGCGC             CTTGCAAGGGGTGCC 100 69
    Ajs_3408 3600858 .. 3600868 -  -2.4  -4.07568   GCCCCCGCGGCAAAA                 CGGG TGA CGCG                 CGCCTCGGCAACGTC  57 157
    Ajs_3404 3594998 .. 3595026 -  -3.6  -4.19238   CGGGCAAGCGCAAAA        CCGGGCGCATCC GCAAG GGCAACGCCTGG        GTCAGAAGGCTGCTG  65 452
    Ajs_3402 3592163 .. 3592179 -  -2.2  -3.78775   TGGGCGAGGAGGAAA             GCC-GCC GCTG GGCCGAC              ATCATCAGCTTCACC  54 478
    Ajs_3397 3585610 .. 3585625 - -11.8  -5.14563   GGCCTCATCAAAAAA              CGCGGC CAAG GCCGCG               TTTTTTGTTACCCGC 100 46
        purN 3578520 .. 3578547 -    -4  -3.53012   TGGCGCGGCTGCAAA        GCCTGCCCGG TATGGCAC CCGGCCAGGT         GCGCATGCTGGGGCC  51 514
    Ajs_3388 NONE
    Ajs_3387 3574541 .. 3574558 -  -9.8  -3.10975   ATCCACTATCCAATA             CCGCCG CGCAGC CGGCGG              CGTTCCACATTGTCG  62 115
    Ajs_3386 3573244 .. 3573270 - -15.9  -5.24129   CGTGGGCATAAAAAA        CCGCGGC-ACCC TTTC GGGTCGCCGCGG         TACTGCGGTCAGAAG 100 59
    Ajs_3382 NONE
    Ajs_3381 3568184 .. 3568223 -  -3.6  -4.34402   CGGTTTAGAGCAAAA  CAGGGCT-CTAGCGCTTAC CCC ATAAGCGCTAGCAGCTATC  GAAACAGAAGCATTT  64 39
    Ajs_3378 3565158 .. 3565176 -  -6.6  -3.14132   GGTGCCGCCGACCAA             CGGCCTGC CGG GCAAGCCC             GGCGGCTCTCTTTAA  53 335
    Ajs_3377 3563711 .. 3563722 -  -7.2  -3.37464   TGACCAATTGGACAA                GCCG ACGC CGGC                 AAACTCCGCTTGCGG  58 168
    Ajs_3366 NONE
    Ajs_3365 3554223 .. 3554247 -  -7.8   -5.1675   CCATCTAGCAAAAAA         CCCGC-CAGGC AAGG GTCTGCGCGGG          TTTGTGAAGAAATTG  93 262
    Ajs_3364 NONE
    Ajs_3363 NONE
    Ajs_3362 NONE
    Ajs_3361 3550514 .. 3550538 -  -8.6  -5.28176   GGTAGCTATAAAAAA         CAAAGCACCGC CGCA GCGGTGCC-TG          TTCCAGCGGCCAGCG 100 50
    Ajs_3360 3550032 .. 3550057 - -10.3  -2.77043   CGCACCAGGTCAAAG         CGGATGCGCAG AGAC CCGCGCCCCCG          GCAGGGCCGGGGCGG  60 49
    Ajs_3359 NONE
    Ajs_3358 3548158 .. 3548178 -  -4.6  -3.53444   GCACTGCGGCGCAAA           GCTGGCGCC CACC GGCTCC-GC            CGCCCCGCGAAGGTC  53 39
        rpsP 3546625 .. 3546671 - -23.2  -3.65351   CGATGGTGAGGCAAA GAAAAAGGCGGGGTCCGTCAGT TGC ACCAACGGAGCCCGCCCTTTTC GGGAGTGCGAACGAT 100 40
        rimM 3546002 .. 3546014 -  -5.5    -3.727   GTGATGACATCGAAA                CGCAT GGC ACGCG                GACAACCGCCTCAAT  60 36
        trmD NONE
        rplS 3544685 .. 3544711 - -13.1  -5.93252   GTCAAAAAGAAAAAA        CCGCTACAG-GC TTTC GCACTGTAGCGG         TTTCGAGTCGCGCGG 100 56
    Ajs_3351 3543899 .. 3543916 -  -5.5  -3.07233   TTACAAGGCCCAACA             CCGCG GGCGACAG CGCGG              CAGCCTCGCTGCGGC  49 49
    Ajs_3350 3542869 .. 3542881 -  -3.3  -4.01902   ACAGCTATTAAATAA                GGAGC ATC ACCCC                AGCAGCCGCGCGAAG  58 19
    Ajs_3346 3539303 .. 3539324 - -12.3  -3.18264   TGTCGTATGTATGAA           GCGCGCGGGT GCA ACCCGCG-GC           GGCTTCGTCAGTGGT  70 272
    Ajs_3345 3537361 .. 3537385 - -12.9   -5.4505   GCGCGCAATAAAAAA          GCCAGCCCT GGACGAG AGGGCTGGC          TTGTCATGTGTTCCG 100 51
    Ajs_3340 NONE
    Ajs_3339 NONE
    Ajs_3338 3531591 .. 3531611 -  -5.4  -2.71924   TAGCTGGGGCGAAAC           GGT-CAGGC GTGC GCCCGCACC            CAGCTTTTCAGGGCC  44 7
    Ajs_3337 NONE
    Ajs_3336 NONE
    Ajs_3335 NONE
    Ajs_3334 NONE
    Ajs_3333 NONE
    Ajs_3332 3528430 .. 3528453 -  -4.6  -4.05446   GCGGCCAAGGACAAA          CACTCGGCG GTGGATG CGC-GAGTG          ACACGGCACGAGGGC  62 372
    Ajs_3330 NONE
    Ajs_3329 3526226 .. 3526241 -  -6.8  -3.55444   TGTGCAGTCTGTAAA              CCCAGT GGCA ACCGGG               CGGCAACCAAGTGGT  59 80
    Ajs_3328 NONE
    Ajs_3327 3524462 .. 3524477 -  -7.5  -5.28778   ACCAGCTACAAAAAA              GCCCC ACGGCG GGGGC               TTGCTATTAGGTCTT 100 461
    Ajs_3324 3519231 .. 3519259 -  -2.5  -3.35542   GTTATCCTGAAAAAT       CG-ATGAGGGACA TGCGC TGCCCC-CATACG       TCTCAAGCCCCACGC  45 144
    Ajs_3323 NONE
    Ajs_3322 3517708 .. 3517722 - -12.8  -5.49234   ACAGGCAAGAAAAAA               CCCGCC AGA GGCGGG               TTGGAAGTACCGCGG 100 118
    Ajs_3317 3511758 .. 3511772 -  -4.2  -3.31322   GCCAACGGGCTACAA               GCGC TATCAGT GCGC               CTTGTCCCAGTCGGG  48 17
    Ajs_3316 3510684 .. 3510695 -  -7.2  -5.52384   GCGCCATCAAAAAAA                GCCC CGAA GGGC                 TTGTGTGCGTGCTGG 100 51
    Ajs_3315 3509672 .. 3509694 -  -8.3  -3.55444   CCCGCACCCTCTAAA           CGGCTGCAC CCTCT GCGCGGCCG           CCGGCCCTTGGACTG  65 103
    Ajs_3312 3506211 .. 3506223 -  -3.3  -3.26319   AACCGTTTACATCAA                GCGCT GAC AGCTC                CTATTTTTGACGGGC  46 43
    Ajs_3311 3504745 .. 3504764 -  -9.2  -2.70932   CGCGCTGCTCAAGGA            CGGCACGC AGTT GCCTGCCG             ACGGGCAGCTGGCAG  55 394
    Ajs_3309 3496628 .. 3496638 -  -4.6  -3.58269   GAATGGACCTGTAAA                 CGGC CTC ACCG                 ATCGCCAACACAGCG  55 83
    Ajs_3308 3493776 .. 3493792 -  -2.1  -3.35679   TGGCGTTACGCACAA              GCGCACT GCC AGGGCCC              CTGCGGTCCTGGTCC  45 288
    Ajs_3307 3492644 .. 3492675 -  -2.9  -4.12738   GGAGAGGAAACGAAA     GGCAGCGCCG--TGC ACGC GCATGCGGCGCAGGC      TGTGTAAGAAGTGGC  61 41
    Ajs_3306 NONE
    Ajs_3305 3490282 .. 3490312 -  -8.8  -3.09635   ACCGGCACCACCCAA       GCCAGGGCCGCCGT GCA AGGGCCGCCCCGCC       GCACGGGCAGCGTCC  57 99
    Ajs_3304 NONE
    Ajs_3303 3488182 .. 3488192 -  -4.6   -4.3586   TGATGTACATCAAAA                 CCCC ACT GGGA                 TCGGGTGACGACAGT  68 304
    Ajs_3301 3487688 .. 3487719 -  -7.2  -2.79133   CAACTGCCGAGCATA      GTCGCAGCCGCA CACGCCAC CGCTGCCGCGAC       CTTACCGGCCACGCC  52 27
    Ajs_3300 NONE
    Ajs_3299 3484465 .. 3484523 -  -3.5  -3.06515   GCGCACTGTGAAAAT TTTGCAGC-GCGGGCGCGGGCGCGGGCGC CAG GCGCCGG-GCTCGCACGTGCCGCTGCGTC AGCGCCGCGCGCGCA  43 24
    Ajs_3298 3482985 .. 3483003 -  -4.5  -2.78384   GCGCCGCCGAGCATA            GC-CAGCG CCAT CGCCGCGC             AGCCCCTGCGATTGG  42 149
    Ajs_3297 3481904 .. 3481947 -  -5.1  -3.72576   GTGCCGCCTAGGAAA CTGGCGCGCCCCCCGGCGTGG GCCA CCGCGC-AAGGGCCGC-CCCG CCGCGCTGGTGGCGT  58 112
    Ajs_3296 3480627 .. 3480647 -  -9.7  -3.91911   TTTACGTCAAGCAAA            TTCGCACCA ACA TGGTGCGAC            ATCCCGACCCCATCA  74 38
    Ajs_3295 3478941 .. 3478951 -  -8.2  -3.64703   GCCTTTTCACCGAAA                 GCGC CAC GCGC                 TGGACGGCCCGTCAG  65 37
    Ajs_3288 NONE
    Ajs_3287 3469987 .. 3470001 -  -2.1  -3.11569   TCATGGAGTCAAAAC               TCTAC GGTGT GCAGA               TGGAGGGCAGTATGC  43 4
    Ajs_3286 3468935 .. 3468956 - -10.9  -2.77791   TTTAACCCAATATCA           GC-GCAGCTG CGG CAGCTGCAGC           GCGGCCAGGCCCTTC  63 1
    Ajs_3283 3466848 .. 3466858 -  -4.6  -3.64703   GGTTTTTGATCGAAA                 CCGC CGA ACGG                 GCTGTTTCTCAGGCG  55 34
        rpmF 3466500 .. 3466531 - -14.5    -4.208   CGCCAAAACGACAAA      GGCCCGC-GCTACA TTTTT CGTAGCAGCGGGCC      CGGAGGGTGCGCAGC 100 46
    Ajs_3281 NONE
    Ajs_3280 3464368 .. 3464405 -  -9.1  -4.67608   CAGTTCAAGACAAAA   GCGGCT-CCAGCGCTTGC ACA GCAAGCGCAAGCAGCTAC   ATTTTCAGGAGCACC  93 22
    Ajs_3279 NONE
    Ajs_3278 NONE
        acpP NONE
    Ajs_3276 3460936 .. 3460962 -  -2.1  -3.65902   TGGACGTTAGCCAAA         CACTGGGGAGG ACGAG CCCGCCCGATG         ATCCAGAGACTCGCG  49 73
    Ajs_3275 NONE
    Ajs_3274 NONE
    Ajs_3273 NONE
    Ajs_3272 3457926 .. 3457937 -  -7.2  -2.68823   TCTTTTCCAGACAAT                CCGC AACA GCGG                 GAATAGCAGTTTGTG  52 86
    Ajs_3271 3456038 .. 3456063 -   -14  -5.58179   CATGACAAGAAAAAA         GGGCGCGTCA AACAAG CGACGCGCCC          TGAACCAACAATCTT 100 390
    Ajs_3270 NONE
    Ajs_3269 NONE
    Ajs_3268 NONE
         rnc NONE
    Ajs_3266 3450971 .. 3450983 -  -4.7  -3.70863   CAGAGAGCAGCGAAA                CGGGC CAC GCCAG                AAGCCTGCGCGGAGC  58 131
    Ajs_3265 3450031 .. 3450044 -  -2.3  -3.72695   AGCGCCGCGAGGAAA               GCCTG AGGA CAGCC                TCTCAGAGTTTCTGC  52 28
    Ajs_3264 NONE
    Ajs_3263 3447195 .. 3447232 -  -3.5  -3.68351   GGGTTATGAGTCAAA   TAGGTCTCTAGCGCTTAT CCA ACAAGCGCCAGC-AGCTA   TGGTTTCAGGAGTCC  54 23
        acpS 3446765 .. 3446775 -  -2.4  -3.48276   GCGCTTGCCACACAA                 GCGC TGC GGGC                 TGATTTTGCTTCAAT  47 36
    Ajs_3261 3445626 .. 3445636 -  -2.4  -2.52543   ACCCGTTTCAAGGCA                 GCAG GTC CAGC                 GCGTGCATGTACGCT  37 7
    Ajs_3260 3444351 .. 3444387 -  -7.3  -4.82901   TGTCCGGCAGAAAAA   CCCGG-C-GCCAGCGAT GGGCT ACCGCTGGCTGGCCCGG   CGTGCCGGCCAGCCC  88 189
    Ajs_3259 3443500 .. 3443515 -  -3.2  -3.50853   GGGCGGCAAGCAGAA              CCAGCA GGAT CGCTGA               ACGTGGTAACCCCAA  49 378
    Ajs_3246 3430239 .. 3430266 -  -8.4  -3.00946   TGCGCGGAGAAATGA        GCCTGATCGG CCCGCGTC CCGAGCAGGC         AGAGTTCGCGCACCA  55 264
    Ajs_3242 3426739 .. 3426781 - -14.2  -4.72986   CACTGGCATCAAAAA CAATAGCTGCTAGCGCTTGC TGG ACGGGCGCTAGCAGCTATTT TTATTGAGAACAGTG 100 44
        rpsF NONE
    Ajs_3215 NONE
        rpsR NONE
        rplI 3398280 .. 3398295 - -11.8  -5.42198   GGTGAAAAAACAAAA              GCCGCC CAAG GGCGGC               TTTGTATGGCAGAGC 100 56
    Ajs_3212 3396680 .. 3396715 - -16.4  -4.51743   TCACTACTAAATAAA    TAGCTACTAGCGCTTAC CCA GTAAGCGCTAG-AGCCA    TTTTTGACTCTTAAT 100 36
    Ajs_3207 3391909 .. 3391935 -  -2.9  -5.02074   TTACCCGTCAAAAAA         GGCCCCAGC GCCCTATTG ACTGGCGCC         GGCAGCTATCAAAAA  78 47
    Ajs_3206 NONE
    Ajs_3205 3389057 .. 3389068 -  -2.2  -3.35679   GCGCTTGATGGATAA                GCGCC AGA GGC-C                GATTTGATCCCTAAT  45 36
    Ajs_3204 NONE
    Ajs_3203 NONE
    Ajs_3202 3386526 .. 3386550 -  -9.9  -3.84451   CCCGGCAAAGCCAAA          GCGCTGATCCG CTC CAGACCCGCGC          GGGCGCCGTCTCCGG  76 422
    Ajs_3199 3385483 .. 3385499 -    -5  -2.56122   CCGGACGATAAAAGT              CAGCCC ACCTG GGGCGG              CGCGGCGATGCCCCA  43 8
    Ajs_3198 3382770 .. 3382792 - -17.7  -2.62184   CTTTCTGGCAGATGA           GGGCGCGGG AAAGG CCCGCGCCC           TCGTTCAATGGTAGA  86 43
    Ajs_3197 3382338 .. 3382348 -  -4.6  -3.03124   GGTGATCGCGCAATA                 CGGG CCG CCCA                 ACGGCTGAATGCGCG  47 117
    Ajs_3195 3380354 .. 3380399 -  -6.1    -3.727   GCCATTACACGCAAA CGCGGC-CATCTGTGGCATA GAGCGCA CATGCCACGGCCACGCCGCG CTACATCAGGCGGCG  60 26
    Ajs_3194 NONE
    Ajs_3193 3378467 .. 3378499 -  -4.8  -3.91716   TTATGGGTCAAACAA      GCCTCTAGCGCTTA CTGTT CAAGCGCTGTAAGC      TATAAAAACAGGAGC  60 66
    Ajs_3192 3376931 .. 3376952 -  -6.5  -3.29649   AGGCGACGACATGAA           GCGCGC-CTT TGC ACGTGCGCGC           CAGCGCGGCGTGCGT  53 507
    Ajs_3180 NONE
    Ajs_3179 NONE
    Ajs_3178 3361823 .. 3361839 -  -2.9  -3.84406   CGGGGATGATAACAA              CCGCAAT TCA ACCGCAG              TTATCGTCCTTTACT  56 36
    Ajs_3177 3360740 .. 3360754 -  -3.4  -5.42259   CGATTGTCAAAAAAA               GGTCCA GCG CGGCCC               CGACTCACGGGGCGC  91 92
    Ajs_3176 3359500 .. 3359524 -    -8   -3.0263   ACCAGGGTTTCAATA         GGTGGTAGAGA CGAT TCT-TACCACC          TTTTCATCAATTGGC  54 158
    Ajs_3173 3353160 .. 3353176 -  -9.3  -3.21276   GCTGCCGTCAGAAGA              CCAGCGC AGC GCGCAGG              AACACGCCCTTGCCC  61 1
    Ajs_3172 3351207 .. 3351247 - -14.8  -3.04792   CGACGACGGCCAAGA CACCGCGCACGGCAGCATGG CCA CCATG--GCCGCGCGCCGTG TCAGGGTCAGGGCTT  78 32
    Ajs_3171 3350079 .. 3350126 -  -9.8  -3.01712   GCGTGGGCCGCAAGA CCGCCAACGTGGTGCTGAACG TGGCGTT CGGCCAGC-CCACCATGGCGG TGGACACGCACATCT  60 305
    Ajs_3169 NONE
    Ajs_3168 3348188 .. 3348201 -  -2.3  -3.66874   CCAATTTGACGTAAA               CCTCA GTAA TGCGG                CGGCAGTTCGTCGCG  49 14
    Ajs_3167 NONE
    Ajs_3166 NONE
    Ajs_3165 3345930 .. 3345951 -  -5.9  -3.02144   CGACGCGCTGGAAGA           GATGCAGCAG GAG CTGCTG-ACC           CACATGCACAAGGAG  49 356
    Ajs_3163 3344920 .. 3344939 -  -2.8  -4.81083   CTGAATCATCAAAAA            GTAGAGCGC TTC GCGCT-TGC            AGGTAAAGCGCTGGA  73 49
    Ajs_3161 3343251 .. 3343268 - -12.7  -4.71426   GCTGTACGAAGAAAA             GCGCTGC CGCG GCAGCGC              TTTTTTCATGGGTGC 100 51
    Ajs_3156 NONE
    Ajs_3155 3335560 .. 3335574 -  -5.6  -3.21924   CGATCGTGGACAAGA               CCGTGC AGC GCATGG               GGGGCATCTTCGCGC  51 274
    Ajs_3152 3332086 .. 3332127 -  -6.6  -3.28712   GGGCTCGGCGCAGAA GTC-GGCCTACG-TGGCG-GC CAA GCACGGCATCGTGGGCCTGAC CAAGGTGACGGCGCT  53 391
    Ajs_3150 NONE
    Ajs_3149 3328171 .. 3328188 - -12.7  -5.63517   TCCGGAAACAAAAAA             GCCGCTC TGTC GAGCGGC              GTTTTGTACAGAATT 100 223
    Ajs_3148 NONE
        rimO 3326008 .. 3326030 - -13.5  -5.40072   GGCGCCCGAAAAAAA           GGGAACGTG GTTCG CACGTTCCC           TTTTTTGTGGGCGTG 100 56
    Ajs_3143 3323002 .. 3323032 - -11.1  -4.82333   AGAAGAAGCTAAAAA      CAGGCG-AGCCCGC TCAG GCAGGCTGCGCCAG       GGTGGAAACAGAAGC 100 8
    Ajs_3142 3321746 .. 3321779 - -14.5  -2.61912   CCACGCATGCACAAG     GCCGTGGCCCGATTG ATAC CCCTCAGGCCACGGC      TGCGCACGCGCGCAG  74 14
    Ajs_3141 3320640 .. 3320652 -  -3.3  -3.18264   GCGCTTATCCAGCAA                GCGCT GAC AGCTC                CTTGAACGATAGCGA  44 43
    Ajs_3136 NONE
    Ajs_3135 3311084 .. 3311100 -  -5.1  -3.99779   GAAAATTGAATCAAA              TGGGC CTGCAGC GCCCA              ATTAATAAGCGCTAA  63 89
    Ajs_3133 3308442 .. 3308462 - -18.3   -3.9941   CTCGTCAGAATGAAA            GGCAGGCCC GCC GGGCCTGCC            GCGGCATCAGCTCTT 100 32
    Ajs_3132 NONE
    Ajs_3131 3305371 .. 3305389 -  -4.4  -2.89742   TGGAACCCGCAGAGA             TCGAGGGC TAC GACCGCGA             TGAGCCCTCGCACGC  44 381
    Ajs_3129 3303781 .. 3303813 -  -2.6  -3.01712   CCTCCCCGGGGAAGA     CGGGTGACGGCAGCG CGCT CA-TGCCCCCACCCC      GGCCAGGCCGCCCAC  41 11
    Ajs_3128 NONE
    Ajs_3127 3301723 .. 3301746 -  -4.4  -3.09516   GCGCGCATCACGCAA          CTGGCCGACG ACGG CCCCGGTCAG           GTGCTGGTGGCGCTG  47 484
    Ajs_3123 3298371 .. 3298402 -  -2.2  -3.42256   ACCTACGTAACAACA      CGTCATCACCCCG TCATACG CGGGGTTGTG-CG      GGACATTCATGCGCC  47 32
    Ajs_3122 NONE
    Ajs_3121 3296743 .. 3296759 -  -3.6  -3.71108   AAAACGAATGGGAAA              GGGGTC GGTCA GACGCC              CAGCAACTGGTTGAG  54 17
    Ajs_3120 NONE
    Ajs_3119 NONE
    Ajs_3118 NONE
    Ajs_3117 3292198 .. 3292231 - -14.5  -4.91852   GCTATCAAAAACAAA     GCGGCCATGCAGGGC GGTT GCCGCGCATGGCCGA      GGGTGCCGCCGGCCT 100 77
    Ajs_3113 3286392 .. 3286446 - -13.2  -2.56596   TGCCGCAGGAACTCA GCGGGGGACAGCTGCAGCGCGTGGCC ATT GCCCGCGCGCTGGTGCACCGCCCCGC CCTGCTGCTGGCCGA  67 218
    Ajs_3109 3282369 .. 3282397 -  -9.6  -3.03441   CACGACCCCCGAAGA       GGC-CGCGGCGCTG ATG CAG-ACCGCGCGCC       GCGTCGCGCTGGCGG  57 245
    Ajs_3105 3278019 .. 3278036 - -14.1  -4.19704   CAACTGGATGCAAAA             GGGCCGC CGCA GCGGCCC              CATCGGGCGGAGTGC  93 52
    Ajs_3104 3275644 .. 3275656 -  -4.7  -3.50393   CGCCACGGCAGAGAA                CGTGC TGC GCGCG                CTCGGGCGGCTGGAG  53 79
    Ajs_3101 NONE
    Ajs_3100 NONE
    Ajs_3099 NONE
    Ajs_3098 3267150 .. 3267200 - -21.8  -3.53012   TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG 100 34
    Ajs_3096 3265270 .. 3265281 -  -2.2  -3.68265   AAATTCAAGGCGAAA                CCAT TCCG ACGG                 ACAAGCCTGACACCC  52 462
    Ajs_3088 3258591 .. 3258639 - -13.7  -2.93723   CCCTGATCAACGACA GCGTGGGCCGGGTCGAGCAAGGC AGC GCCTTGGTGGACCAGGCCGGCAC CACTATGAGAGAGGT  71 401
    Ajs_3086 NONE
    Ajs_3085 3254783 .. 3254793 -  -4.6  -3.11208   TTGCACTGAAAACGA                 GGAG ACC CCCC                 TTTCCACTGAAAGAA  48 228
    Ajs_3083 NONE
    Ajs_3082 3250716 .. 3250735 - -12.1   -2.7224   GGATAGCATAGAGCA            CCGCGGC CCGGGC GCCGCGG             CCTTCCACCATGACC  66 356
    Ajs_3080 NONE
    Ajs_3079 3248453 .. 3248469 -  -4.4  -3.30159   CGAATGCCTGGACAA             CG-GGTC GATC GACCGCG              CCCTGCTCGACGTCG  49 137
    Ajs_3077 3246545 .. 3246570 -  -8.9  -2.62735   ACATCGGGCAGATCA         TCGCCGCGC TGGCCAGT GCGCGGCGT          TGAGCGCTCACGACG  53 33
    Ajs_3071 NONE
    Ajs_3070 3238167 .. 3238193 -  -7.8  -2.58663   ATCGACGTGGACAAG         CCCGCGGACCTG GAT CTGGTGCGCCGG         ATGGTGGCGGCCGAC  50 53
    Ajs_3062 NONE
    Ajs_3061 3229213 .. 3229251 -  -6.7  -3.06509   GGGGAAAGAAGGACA  TGGGC-GAGAAGGCGGGA AAGA TCCCCCATTCTCAGCGCA   GCACGCCGAGCCGGC  51 18
    Ajs_3060 3228380 .. 3228418 -  -6.8  -3.00525   GGGGGCTAAAGCATA GCGGGTACGGGATGTCCCC GACA GGGG-C-TCCAGTACC-GC  GGTCGCCCTGCAGCA  51 47
    Ajs_3059 3227202 .. 3227221 -  -4.2   -2.8805   ATCACTTCGGAGAGA            GGCGT-CCC TCC GGGTACGCT            GGCGATCAAGATCGG  44 31
    Ajs_3058 3226143 .. 3226166 -  -2.4  -3.14683   ATAGGCGCGCACGAA          GGCGGCGAT CATGGGC ACCGC-GCC          GCGGGCGCGGGCGGC  43 67
    Ajs_3057 NONE
    Ajs_3056 3223424 .. 3223444 - -10.4  -2.57132   GGGCTTCGTCAGAAG            GCCGCGTC AGGAA GACGCGAC            GGGCGGCGGCGTGGT  59 11
    Ajs_3055 3223023 .. 3223035 -  -3.3  -2.86071   GTGGAGATCAACAAC                GAAGG GAG CCGTC                CGAGGCCATGCAAGC  42 5
    Ajs_3054 3222327 .. 3222365 -  -7.2  -3.04792   GCACGACGCCGAAGA   TCAGCGCGATCACGGCGC CCA GCGACGCGCTCCAGCCGA   TGCCCAGGCCTCTGG  54 154
    Ajs_3052 NONE
    Ajs_3051 3219472 .. 3219503 -  -2.8  -3.28712   CTGTTCTCCGGACAA      TGCGGCTTGCGAAG GCTT CTTCGGTCGCCTCA       AAAACGAACTGTTCT  46 380
    Ajs_3048 3216177 .. 3216187 -  -3.2  -4.72272   GTTTTTCACCAAAAA                 CGAA GTG CTCG                 CATTTAAAATTGGAT  73 184
    Ajs_3046 3214430 .. 3214440 -  -8.2   -3.0806   GGTAAAGCTCTAAGA                 GGCG CAC CGCC                 GGGGCCGACAAGCCA  57 66
    Ajs_3042 NONE
    Ajs_3041 3207420 .. 3207430 -  -6.8  -3.90112   TGGCGCCCAACGAAA                 CGGT GCA ACCG                 TTGTTGAGAACCAAA  66 428
    Ajs_3039 3205280 .. 3205293 -  -6.7  -4.07568   GCGCCCTGGCGAAAA               GCTCT ATGA AGAGC                TGTTGATAGGTGACG  67 380
    Ajs_3013 NONE
    Ajs_3012 3178102 .. 3178112 -  -4.6  -3.05384   GCTTGTCGTATTGAA                 CGCG CAG CGCA                 GAGTTAGACAGCACC  47 435
    Ajs_3011 3176919 .. 3176930 -  -2.2  -3.29471   TTTCCAGCACACGAA                TGCC GCCA AGCA                 CAGCCACATCCCAAG  45 79
    Ajs_3010 3175784 .. 3175795 -    -3  -2.55351   GGTGTGCAGATCAAT                CATT TGCG AATG                 CTGTGCTTATGGGAA  39 9
    Ajs_3009 NONE
    Ajs_3008 3174394 .. 3174422 -  -3.2  -3.17219   GATAACTGGCACCAA       TGG-ATGAAACCG ACCA CGGTTTGACGCCA        CGAATCGCAGATTTG  44 120
    Ajs_3005 3170740 .. 3170765 -  -7.5  -2.78463   ACGGTTGCCACGACA         CGCGCGCCAAGC TGG GCCTGCCGC-CG         TTGGGCGACACGCAG  51 192
    Ajs_3001 3167429 .. 3167446 -  -8.4  -5.10933   CCACCCAAAAGAAAA             GGCCTG TGTTGT CAGGCC              TTGGGATCGGGGAGC  93 19
    Ajs_2999 NONE
    Ajs_2998 NONE
    Ajs_2997 3163317 .. 3163351 -  -9.9  -3.54459   TCAAGGCCGCTTAAA    GGCACGTCCGAGCGCC CCAA GGCGCTCGG-CTCCCC     CCGGCCTCCGCTTGC  70 79
    Ajs_2993 3159499 .. 3159509 -  -4.6  -3.73072   AATGGGTGGATGAAA                 GCGC CCT GCAC                 CGATGGCTGTGCGCT  58 39
    Ajs_2992 NONE
    Ajs_2991 3157172 .. 3157190 -  -5.9  -3.05384   CTGGCCGCCACGGAA             GGCGATG TCACG CCTCGCC             CGCGGGCGCGCCACC  49 14
    Ajs_2990 3156583 .. 3156593 -  -4.6  -3.97741   ACATAAAAAATAAGA                 GCGC CTC ACGC                 TTGCCATATGGCGGT  63 96
    Ajs_2988 3154745 .. 3154784 -  -7.8  -3.31144   GTCCGAGGCCGACAA GCACGGCG-GCTGACGGG CGCTTC CCCG-CGGCGCACCGCGC  ACGACCCTGCGCCAC  58 185
    Ajs_2986 3152337 .. 3152370 -  -8.7  -3.14051   GGAGCGCCAGCAACA     GCGCGACGC-CGAGCC CGC GACGCGTGCAGCGCGC     CCTCGCGCCACCCCG  56 358
    Ajs_2982 3148706 .. 3148716 -  -6.8  -3.05384   GGGCCCGGCACTGAA                 CGAC GCC GTCG                 CCGGCCAGATCCCGC  51 428
    Ajs_2978 3143987 .. 3144021 -  -4.2  -3.64703   GCGCTCGCACCCAAA    TCCGCCACCATGCCG ATCGCG CTGCCC-GTGGCGGA     GCGCATCGGCGGCGC  54 324
    Ajs_2975 3141981 .. 3141991 -  -4.6  -4.66953   TCAACAGCGCAAAAA                 GACC ATC GGCC                 TCTCCCGGTGCTACC  74 385
    Ajs_2974 3141301 .. 3141342 -    -3  -4.06419   GCGCGCGACAAACAA CTGGACGCTGCGCAGCGCGAT GCC ATCGTG--GCTC-GCGCCCAG GCGCTGGGGGTGGAT  59 231
    Ajs_2971 NONE
    Ajs_2970 NONE
    Ajs_2969 3136295 .. 3136310 -  -4.6  -3.14848   CGGGGCCATGAAAAG              CGGGGA TCGT TGCCCG               TGAGGGGCGCTTCAG  48 37
    Ajs_2968 NONE
    Ajs_2967 NONE
    Ajs_2966 NONE
    Ajs_2965 NONE
    Ajs_2964 NONE
    Ajs_2963 3130714 .. 3130737 - -12.4  -3.01712   TCTTGGCCTCGAACA          CCCCGATGAC GAAA GTCGTCGGGG           TGTTCGTCTTTGTGG  68 99
    Ajs_2959 3127656 .. 3127687 -  -3.8  -2.89564   GCTCGATTCGATAGA      GATTCATTTTCGTT TATA AACGAATAAAAATC       AAGCTACCGATTCGG  44 24
    Ajs_2958 NONE
    Ajs_2957 3126844 .. 3126858 -  -5.6  -3.63627   CGCCGAGAGCTGAAA               CAGGCC ATT GGCATG               GAGTAATGATGACTG  57 187
    Ajs_2946 3116043 .. 3116053 -  -8.2  -3.55444   CCGTCAGGGGCGAAA                 CCCC GAA GGGG                 GTTCGATGCGCAGCA  65 212
    Ajs_2944 3114742 .. 3114754 -  -6.2  -2.55267   AAACATGGGAATGGA                GGGG AACCG CCCC                TCCGGCGGGGAAAAT  46 52
    Ajs_2943 3112615 .. 3112638 - -10.9  -3.65812   CTCTCTCCAAGAGAA          GCGCCCCGG TCGAAT CCGTGGCGC           TTGCCTTCGGTACGG  73 42
    Ajs_2942 3112299 .. 3112324 - -23.3  -3.01712   GTCGGGCCTTCAACA         CCGGGCGCGGC CACT GCCGCGCCCGG          ATTCTTGAAGTTCAC 100 83
    Ajs_2941 3111174 .. 3111184 -  -8.2  -3.05463   ATCCCCTGGAGGCAA                 GCGC AGC GCGC                 AGCGCCGCAGGCGCG  57 168
    Ajs_2939 3110058 .. 3110069 -  -7.2  -3.57144   GGGCGCAGCCCGAAA                GCCC GACG GGGC                 AAGGCACCGGCACGC  62 160
    Ajs_2936 3107506 .. 3107521 -    -4   -4.4261   GTGTCAAGACGAAAA              GC-ATCC GAT GGATTGC              GTGAATCGTCTGAAT  69 229
    Ajs_2935 3106559 .. 3106606 -  -4.9  -3.31461   GACGCATGGTGAGAA CCTCCAT-CGGTTGCAGGGC TCCGGCCAC ACAGCGCAACCGGATGGAGG CAGTCTCAGAAAACG  50 53
    Ajs_2934 NONE
    Ajs_2933 3105233 .. 3105248 -  -3.2  -2.83112   AGGGAAGTTAGGAGA              GGC-CGA AAC CCGCGCC              AGCATTGGCTTTGCG  42 138
    Ajs_2932 NONE
    Ajs_2931 NONE
    Ajs_2930 NONE
    Ajs_2929 3103016 .. 3103031 -    -9  -2.82834   GATGGCACGACGAGA              TGCACG ACAA CGTGCA               GCGAGTCGGCGGCCA  58 41
    Ajs_2924 3096218 .. 3096264 -   -11  -2.75535   TCAACACGGGAATCA TCGTGCCGCTGGCGATGCCTT GCAGGA AACGCATGGCCAGCAGCA-GA TCGAGGTCATGGATG  63 369
    Ajs_2923 3094246 .. 3094258 -  -9.1  -2.65442   ACAGCAGCGAGACGA                CAGCC ATG GGCTG                GCCAAAGGCTTGCAG  56 374
    Ajs_2921 NONE
    Ajs_2920 NONE
    Ajs_2919 NONE
    Ajs_2918 NONE
    Ajs_2917 3090723 .. 3090741 -    -8  -3.21199   TATCCACGAATTGAA             CGCCGCCC CAG GGGCGACC             AACATCACAGCACCG  56 30
    Ajs_2916 NONE
    Ajs_2915 3088671 .. 3088697 - -14.5  -5.30616   CGAGCCAAAGAAAAA        CGCCGCAA-GCG CGGG CGCATTGCGGCG         TGTCGAGAAAAAAGT 100 68
    Ajs_2913 NONE
    Ajs_2912 NONE
    Ajs_2911 NONE
    Ajs_2910 3084667 .. 3084677 -  -4.6  -2.62184   GGGCCGTTCATACGA                 CGGC CCC ACCG                 GAGAAGCTGAAGAAC  43 7
    Ajs_2909 NONE
    Ajs_2908 NONE
    Ajs_2907 NONE
    Ajs_2906 NONE
    Ajs_2905 NONE
    Ajs_2904 NONE
    Ajs_2903 NONE
    Ajs_2902 NONE
    Ajs_2901 3076340 .. 3076365 - -17.6  -3.67976   GGCACCAATTCGAAA         GCCGCCCCTG TTCACG CAGGGGCGGC          TTTTTCGTTCTTGGC 100 11
        cysM 3074718 .. 3074743 -  -8.4  -2.78384   GGGTTTCGTACGACA         TGGCG-ATGCT CCTCC AGCATGCGCCA         TGGCAGTCACAGCGC  54 116
    Ajs_2899 NONE
    Ajs_2898 3073531 .. 3073559 -  -2.2  -4.13767   GCCCGCACCCGAAAA       GGCACCGTCGCGC ATGG GCGTGGCCG-GCC        GCTATGTGCTCACGC  58 388
    Ajs_2894 3067839 .. 3067864 -  -5.3   -4.1552   GATGCCTGGAAGAAA         GCCGCCCAGGC GAAC GCCTGAGTAAC          CGTCTTCGAAGTCAA  65 37
    Ajs_2889 NONE
    Ajs_2888 NONE
    Ajs_2887 NONE
    Ajs_2886 3057215 .. 3057251 -  -2.2  -4.29845   TAATTCAAGTCAAAA    TGGCTTCTAGCGCTTA CCCAT CAGGCGCTAACAGCTA    TTAAATAAATAGCAT  62 58
    Ajs_2882 3054644 .. 3054664 - -16.1  -5.76949   TATGGGCAAAAAAAA            CCCGGGCGC CTG GCACCCGGG            CGTCTTGGTCAGCCG 100 71
    Ajs_2881 3052970 .. 3052985 -  -8.2  -5.13722   TGCATCAAAACAAAA              GCGCCC CGAA AGGCGC               TTTGTTTTTGATAGC  93 88
    Ajs_2879 NONE
    Ajs_2878 NONE
    Ajs_2877 3046979 .. 3046995 - -10.1   -4.1899   GTACGTGATGGAAAA              GCGGCAT GGA ACGCCGC              ACGAGCCCAGCGTCG  81 115
    Ajs_2876 3046403 .. 3046427 - -11.4  -3.05463   ACGCTGTTCATGCAA          GGGGAGCGTG TCATG CACGCTCCCT          TTTTTATTGAGGACT  66 77
    Ajs_2872 NONE
    Ajs_2871 3041313 .. 3041336 -    -8  -3.53444   GGATGTGCGGTGAAA          GCTACCGCGC CAGC GCGCGCTCGC           GGATTGCGTCGAAGC  60 3
    Ajs_2870 NONE
    Ajs_2869 NONE
    Ajs_2868 3038391 .. 3038409 - -11.6   -2.9294   CAGATCATCGACACA             GGTGCGCC CGT GGCGCGCC             AGACCCGGCGCATCC  63 275
    Ajs_2855 3028239 .. 3028269 -  -3.9  -3.61889   TAAAAATCCGCCAAA       CCCGCATGCGG TCCCTGCAC CCGCATCAGGG       GTTTACCGGCTCGCC  53 88
    Ajs_2854 NONE
    Ajs_2853 NONE
    Ajs_2852 NONE
    Ajs_2851 3023324 .. 3023336 -  -6.3  -2.52464   TTGCCGGTGAATCCA                GTCAT CGC ATGAC                CTCCAGCGCCTGTGC  48 14
    Ajs_2850 NONE
    Ajs_2849 3022256 .. 3022276 - -16.9  -4.62054   TCAACCAAAGCAAAA            GGGGCAGGT ATC ACCTGCCCC            TTTTTGATCGTCCCT 100 44
    Ajs_2844 3017030 .. 3017045 -  -5.4   -3.7941   CACGGGCCACAACAA              GCC-TGG GAA CCAAGGC              ACCGACTGGCGCCAG  60 357
    Ajs_2835 3001592 .. 3001641 -  -7.7  -3.93288   GTGGATGGAACGAAA CCGAACACGCGCCCACAGT-GTCC GCC GAACCAGGGCGGGCGCGCAACCGG GTTCAAAATTTGTTG  68 124
    Ajs_2834 3001084 .. 3001107 -  -9.5  -2.87564   GCAGGGCTTCACAGA          GCCCGCGCC CCGCTC GGCACAGGC           CCGCCCGGAACACCG  58 41
    Ajs_2829 NONE
    Ajs_2828 2994471 .. 2994512 -  -4.4  -4.72272   GCCCGCTATCAAAAA TGTGAGCTACCAGCGCTTG ATGGA CAAGCGCTGG-AGCCTATT TTGATCCATATCTTC  75 39
    Ajs_2826 NONE
    Ajs_2825 NONE
    Ajs_2824 NONE
    Ajs_2823 2987723 .. 2987735 -  -9.1  -3.36878   GCCATCGACTGACAA                GACGC AGA GCGTC                GCCTGATTCCAGGGC  63 265
    Ajs_2821 2986217 .. 2986243 -  -5.1  -4.38129   ACACAAGCAGGAAAA        GATGGCAGCGCA GCGG CGCGCTGGC-TC         ACGAAGAATGGAATT  68 40
    Ajs_2820 2984585 .. 2984601 -  -4.4  -3.01712   GTTGCGTGCTCAACA             GGCTTCG GACG CGA-GCC              GGGGGGAGACAGGCA  45 316
    Ajs_2818 2982629 .. 2982644 -    -6  -3.36492   GGTGGAACTGCAGAA              TGGCGC TGAG GCGCCC               AGCTACGTGGCCGGC  55 162
    Ajs_2813 2976559 .. 2976575 - -15.1  -3.17051   TCCTGAGTACGAATA              CCGCGCG GCG CGCGCGG              GGAAGAATCAAAGGT  83 33
    Ajs_2812 NONE
    Ajs_2811 NONE
    Ajs_2810 NONE
    Ajs_2809 2972510 .. 2972527 - -11.3  -5.86061   TGTGATCAAAAAAAA             GGCATCG CAAG CGATGCC              TTTTTTGCCGGCGCA 100 46
    Ajs_2808 2970666 .. 2970687 -    -3    -3.745   GCAGCTATCAAAACA           GAAGCAAT TTTCAG AATGCTTC            CAGCGGCAGAGCCGT  54 14
    Ajs_2807 2969584 .. 2969602 - -17.4   -5.1356   GCGCATCAACAAAAA             CGGCGCCC CTG GGGCGCCG             TTGGGCCAACGGGGC 100 64
    Ajs_2806 2968090 .. 2968107 -  -3.4  -3.28712   CGGCTCGGGCGACAA             GGTGTCG GTGTT CG-CACC             CGTCGGCATCGCACT  46 209
    Ajs_2804 NONE
    Ajs_2803 2965267 .. 2965283 -  -4.3  -3.83026   CCTCCCCACAGCAAA              GCGCCCA TGC TAGCCGC              GGCGCGCACCGCGCT  58 40
    Ajs_2802 2964939 .. 2964955 -  -5.7  -3.53012   CCGGCGCCCGCCAAA              CCGCTCA CAC CGGGCGG              GGCGCACCCACCGCA  55 13
    Ajs_2791 NONE
    Ajs_2790 NONE
    Ajs_2789 2953074 .. 2953084 -  -4.6   -3.4811   GGGGCGACAAGAATA                 CCCG TGT CAGG                 TGAACGTGGTCTCAG  53 21
    Ajs_2788 2952332 .. 2952384 - -12.7   -3.2964   AAAGTGGGGCGACAA CCGGC-CGGCCACACTGGCGCACAC GGCAG GCGTGCACT-GCGTGGCCCCGCCGG CAGGCGGCTCTAGGT  74 41
    Ajs_2787 2949623 .. 2949650 - -16.2  -5.14626   ATGAGCAAAAGAAAA        CCCCCGCCAGGC ATGC GCCCTGCGGGGG         TTGACGGGAGGGGCC 100 69
    Ajs_2785 2947874 .. 2947896 - -11.9  -4.30576   GGTGGAGGAGCAAAA           GAGCGCCGC GGCCG GCGGCGCAC           AGGAACTCAAGCAGG 100 251
    Ajs_2774 2935663 .. 2935698 -    -6  -3.40403   GCGCCGCCAGGAGAA    CCTGCGCCGCATG-CAG GGG CTGGCAGGCGCCACGGG    CGGCGAGACCGCCAC  55 458
    Ajs_2762 2925210 .. 2925239 - -10.7   -4.9448   AGCTATCAAACAAAA       GCAAAAGGGGCGG TCGC CCGCCCCTTTTTA        GCCCGCCCCTCCTGC 100 60
    Ajs_2755 2915453 .. 2915470 -  -2.6  -2.76404   TCGATCTAAAACTCA             TTGCGC CGGATC GCGCAT              CTCCCAGCGCACCGC  39 5
    Ajs_2754 NONE
    Ajs_2753 2914151 .. 2914173 -  -9.8  -3.78775   TGCCGCATCAGGAAA           CACACGGCAC TGC GTGCCGCCTG           CCGGGTACGGCCAGG  74 55
    Ajs_2749 2910772 .. 2910806 - -14.3  -3.35679   GCCCTTTACTGATAA     GCGGTAGCAGCTATC AAAAG GTTAGCAGCTACCGC     CTGCTAGACCACCAC  82 29
    Ajs_2745 2906538 .. 2906576 -    -6  -2.62184   GCCCGCCCGACAGCA GCACCA-GCGCGCGCC-GC TGCG GCAGGCG-GCTCATGGCGC  GGTCGCGAGCGGGGC  46 17
    Ajs_2744 2905823 .. 2905846 - -18.2  -3.64119   TAAAAACAGAAGCAA          CCACCCGGCA GGCC TGCCGGGTGG           TTTTTTTATGCGCCG 100 31
    Ajs_2739 NONE
    Ajs_2738 2900427 .. 2900451 -  -3.3  -2.74322   CGCAACCTTTGAAAC          CGCCGTCCCGC GCC GCCAGCCGGCC          TACAGCGCCAACACC  40 25
    Ajs_2737 2899929 .. 2899942 -  -3.7  -3.14344   CAGGCCCGCTAGGAA               GGCAG ATGG CGGCC                CAGTTCATCCGGCAG  47 5
    Ajs_2736 2898298 .. 2898308 -  -8.2  -4.11585   ACCCAGTACAAACAA                 GCGC AAG GCGC                 TCATCTTTTTGATGA  76 53
    Ajs_2735 NONE
        gltX 2895156 .. 2895175 - -13.6  -5.08255   AGGTCGAAAACAAAA            GAGCCACC CGAA GGTGGCTC             TTTTTTCCTCTAAAT 100 435
    Ajs_2724 NONE
    Ajs_2723 NONE
    Ajs_2722 NONE
    Ajs_2721 2885289 .. 2885322 -  -2.4  -4.19238   GCGCGAATTTGAAAA     TCTCCACTGATTCA TTCTTC TGAATCAGCGGTAT      CTTGTAAAAATAATG  59 97
    Ajs_2720 2884684 .. 2884711 -  -6.2   -3.4072   CACGCGCTACGACAA        GACAGCGCGCAA CTTC CTGGGCGCCATC         CATCTGGTCGCTGCC  55 233
    Ajs_2718 2883103 .. 2883120 -  -8.3  -3.30159   GGAAGGTCTGCACAA             CTGCCGC TGAG GCGGCTG              TTGTTGGTTGATTTT  60 150
    Ajs_2717 2882326 .. 2882351 -  -8.3  -3.04144   CGCGGACGGTGAAGA         CCATGGTCATGC CGG GCATGTCCA-GG         TTCTTGATGTCCCCA  57 404
    Ajs_2715 NONE
    Ajs_2714 NONE
    Ajs_2713 2880486 .. 2880499 -  -5.2  -4.24413   GCTATCAACAAAGAA               GCGC TGCCCT GCGC                CAGTTCCCCGCTCAC  65 221
    Ajs_2711 NONE
    Ajs_2710 NONE
    Ajs_2709 2875489 .. 2875508 - -12.2  -3.15999   TTTTTAGAGATGTAA            TGGATGCC GGGA GGCATCCA             TACAAGGTTCCCAGA  70 66
    Ajs_2708 2875042 .. 2875058 -  -7.9  -4.62471   GGGAACCTCTAAAAA              CCCCGCT TTT AGCGGCG              TGCAGGCTGAGGCAG  83 87
    Ajs_2707 2873307 .. 2873320 -  -2.3  -2.93381   GAAACGGTGAAATGA               CCTCT CCAT AGCGG                TGATCCCTATTGTTC  40 77
    Ajs_2706 NONE
    Ajs_2705 NONE
    Ajs_2704 NONE
    Ajs_2703 NONE
    Ajs_2702 NONE
    Ajs_2701 2864564 .. 2864574 -  -8.2  -3.61715   GAGTCCCCTGAAGAA                 CGCG ACG CGCG                 TCTGCGTCTCTACTA  62 258
    Ajs_2698 2862849 .. 2862860 -  -2.2  -4.27117   CTTCCAGAAGACAAA                TCCC ATAT GAGA                 ACTCCGTAGCCGGGT  62 102
    Ajs_2697 NONE
    Ajs_2696 NONE
    Ajs_2695 NONE
    Ajs_2694 NONE
    Ajs_2693 NONE
    Ajs_2692 NONE
    Ajs_2691 NONE
    Ajs_2690 NONE
    Ajs_2689 NONE
    Ajs_2688 NONE
    Ajs_2687 NONE
    Ajs_2686 NONE
    Ajs_2685 2848349 .. 2848365 -  -2.1  -5.93809   GTCGCATAAAAAAAA              TAGGCGG CGA CCGCGGA              CACGAAGGCCGCATT 100 230
    Ajs_2683 NONE
    Ajs_2682 NONE
    Ajs_2681 2844939 .. 2844959 -    -9  -2.79796   CCTGACTTGATGAGA           CGCGTCAGC CACG GCTG-CGCG            CAATGAAAAACGTGA  57 9
    Ajs_2680 2843777 .. 2843787 -  -3.2  -2.74144   GGCTCAGGCCTAAAG                 CCGT TGA ACGA                 GATATCGCACCTGCT  40 110
    Ajs_2671 NONE
    Ajs_2670 NONE
    Ajs_2669 2831407 .. 2831421 -  -2.1  -2.57211   ACTCTCGTTGATAAC               TGAAG GGAAA CCTCA               ATGCTCGCCATGCGA  38 23
    Ajs_2668 NONE
    Ajs_2667 2829973 .. 2829987 -  -3.5  -4.13767   TTTTTTATTTCAAAA               TGACG CTAAT CGCCA               AGACCTGCGTAGCGT  61 511
    Ajs_2662 2827199 .. 2827219 - -12.5  -2.93073   CTGGCCGAACAAGGA            CTGGCCGAG AAG CGCGGCCAG            CGTGTGATTCTGGTG  70 408
    Ajs_2660 2824314 .. 2824336 -  -6.8   -4.7033   GAAGGCAAGACAAAA           GGGGGCGGCA CTT CGTCGCCCGC           AAAGCCAGCCTGCAC  81 517
    Ajs_2649 NONE
    Ajs_2648 NONE
    Ajs_2647 NONE
    Ajs_2646 2814057 .. 2814071 -  -2.7  -3.53091   ACTGTTTCCGTTAAA               GCTGG ACTCG CCCGC               TAATTCCCGGACTCG  47 25
    Ajs_2645 2813269 .. 2813283 -  -3.4  -4.05033   TTCACCGCAGACAAA               GACGGC TTC ACCGGC               ACGCTGCGCACCCTG  59 356
    Ajs_2638 NONE
    Ajs_2637 2805821 .. 2805843 -  -6.9  -3.28712   CGCCTGCTGGCACAA          CTCC-GGCCC TCAC GGGCCTGGCG           CTCAGGCAGTCGCAA  55 27
    Ajs_2635 2803216 .. 2803240 -  -7.2  -3.91716   GCATCGGCGAAATAA          CCTTGATCTT TGGCC AAGTTCAAGG          CCGCCCCGCCTGGCG  66 501
    Ajs_2632 2802535 .. 2802570 -  -2.4   -3.7108   AGTTCCAGAGGCAAA    TCTCGGAGCTCTATGGG CGC CCCAT-GAGCACTGGGT    CGTTGTTTTGACGAG  52 53
    Ajs_2624 NONE
        uvrC 2794595 .. 2794620 -  -5.3  -4.74706   GGGAATAGTGAAAAA         CATGGGTGCCA ATTG TGGCACGCGCG          GCAATGCCCCGGGCC  78 51
    Ajs_2622 2793725 .. 2793739 -  -4.2  -3.06501   CAGAGGCGGAGGGAA               CTGAAG CAG CGTCAG               AAATTGCTGTGTCAG  45 317
    Ajs_2621 2793233 .. 2793250 - -11.3  -5.08255   AGCTGCAAAAGAAAA             GGCGAAC TTGC GTTCGCC              TTTGAATGGGGTGGT 100 127
    Ajs_2620 2791118 .. 2791145 - -24.2  -3.75153   CTTGTTGAATGCAAA        GGCCCCCGCAGC TTGC GCTGCGGGGGCC         TTTGTTATTTGGGGT 100 160
    Ajs_2618 NONE
    Ajs_2617 2786798 .. 2786834 -  -9.5  -4.30448   AAATTTAAGTCAAAA    CAGGCTCTAGCGCTTAT GGG ATAAGCGCTAGTAGCTA    TCATTTTATGAGCTA  83 38
    Ajs_2616 2785183 .. 2785202 -  -2.1  -4.38927   CTTTTAGAGAACAAA            TTATGCG TTCCGG CGCATGA             ATGTCCAGCCCCCCG  62 119
    Ajs_2615 NONE
    Ajs_2614 2783650 .. 2783674 -  -7.1  -3.61398   TTCGGTTGTGAACAA          CAGATCACCGA CTT TCGGGAATCCG          CGAGTCATCCAGCCA  59 462
    Ajs_2613 2781113 .. 2781168 -  -7.5  -3.53811   GCCATGCGCCTCAAA GGC-ACGGATCAGGCGCTGAGCC-GCAC GAC GGGCCGGGTC-GCGCCTGCCCCGCCACC AGTCCCAGCCCTTGC  62 347
    Ajs_2611 2779828 .. 2779852 -  -6.4  -3.28924   CACGGCCTCTTAGAA         CCCGC-ATGCT TCCT AGCGTTGCGGG          TTTTTTGTTGTCTCA  55 141
    Ajs_2608 2773858 .. 2773875 -  -8.3  -3.74361   GAGACGGACGAAGAA             TGGGCGG CGGT CCGCCCG              ATGCTACTACCTGTA  69 46
    Ajs_2607 2771548 .. 2771578 -  -5.3  -3.16267   CGCAACCACATCCAA      CTGGTGCGC-CGGC GCCT GCCACGCGCGGCAG       GCTGAACGGCAGTCC  48 60
    Ajs_2593 2757949 .. 2757987 - -14.7  -4.36596   TCGATAAGTAACAAA   TTAGCCGCTAGCGCTTA TGCAG CAAGCGCTAGCAGCTAT   TAATACCATAGCAAC 100 55
    Ajs_2592 NONE
    Ajs_2591 NONE
    Ajs_2590 2755258 .. 2755272 -  -4.9  -2.78384   TGGTGCCCCACCAGA               CGACC CAGGT GGCCG               ACTCGCAGGTGCACA  43 148
        rpsB 2749500 .. 2749519 -  -4.8  -6.15259   GAAGCTAAAAAAAAA            GGGGGCTC ACCA GGGGCCCC             GCTTTTTTTGCGACG 100 59
         tsf NONE
        pyrH 2747747 .. 2747765 -  -2.2  -2.72379   GCAAGCGGGCAATCA             GGCCAGGC GCG GCAAAGCC             ATCAAGCGTACACCA  39 27
         frr 2747137 .. 2747165 -  -3.9  -2.56596   GTGGGCATGAATCCA       GGATC-GATCCG CAAAAC CGGATCAGATCG        CCATGATTTCCTGCT  41 18
    Ajs_2581 2746398 .. 2746412 -  -3.4  -2.75064   CGGTGGACGGAATCA               GGCACG CAG CGAACC               GGGCTGCTGCGCTTG  40 8
    Ajs_2580 NONE
    Ajs_2579 2744282 .. 2744311 -  -2.8  -4.66537   GGTTTGAATATAAAA       CGCACCTGTAAC CCTTAT GTAACAAGCGCA        AAACGCTCACCTTTT  69 51
    Ajs_2578 NONE
    Ajs_2577 2740505 .. 2740516 -    -3  -2.64155   GTGGCGGGAAAGGGA                TTTC ATTA GAAA                 GACGTTCCGATCTGG  39 19
    Ajs_2576 NONE
        lpxD NONE
        fabZ NONE
    Ajs_2573 NONE
        lpxB NONE
        rnhB NONE
    Ajs_2570 2734822 .. 2734837 -  -6.8  -3.35679   GGTGCCGACCGACAA              GGCG-GG CAA CCGCGCC              TATGTGCAGCGCGCC  56 317
    Ajs_2568 2731919 .. 2731933 -  -4.2  -3.10409   CATCAATCTACTCAA               CCGC GGGATTT GCGG               CCCTTAGAAGGGTTC  45 7
    Ajs_2567 2731102 .. 2731128 -  -8.6  -3.14344   TACCGCGTGCAGCAA         GGGGCGGATGAG TTT CTCAGCCACGCC         CGACAAAAGGCATTT  58 15
    Ajs_2566 NONE
    Ajs_2565 NONE
    Ajs_2564 2728613 .. 2728631 -  -8.8  -6.07627   ACGCCCAAAAAAAAA             GGGCGG TAAGTAC CCGCCC             GTTTTGGTCGTGAAG 100 111
    Ajs_2563 2727896 .. 2727914 -  -3.8  -3.15579   TCAATTCCTGACGAA             CTGCCC GTTCAGA GGACAG             TCCGGTTATGCAACC  47 42
    Ajs_2562 NONE
        infB NONE
        rbfA NONE
        truB NONE
    Ajs_2558 2720278 .. 2720298 -  -6.8  -3.05384   GGCTGCCGCAGCCAA            GCCGGTTC AGGCA GAACAGGC            CTTGCCGATCACGCG  51 34
    Ajs_2557 NONE
    Ajs_2556 2717865 .. 2717907 - -15.5  -2.52543   AGGGGTTCGAATTGA TGGGCGGGCG-CCTGCTGCC CGGC GGCAGCGGGGCGCGCGCGCA ATTCATGTACCAGAA  73 244
    Ajs_2551 NONE
    Ajs_2550 2714667 .. 2714681 -  -4.2  -4.44667   GCCGCCAAGAAGAAA               GCGG AGGAAGA CCGC               GTGGCCAAGGCCCGT  70 288
    Ajs_2548 2712733 .. 2712762 - -12.1  -4.89567   CGGTAAAAGACAAAA       GGCCCGAACACCT GGAG ACGGGTTCGGGCC        TGCGGAATGGCGAAA 100 43
        guaA 2711019 .. 2711036 - -10.5  -5.94597   CAAGATCAAAAAAAA             GCCCGCA GTGA CGCGGGC              TTAGGTGTGTTTTCG 100 75
    Ajs_2546 2709178 .. 2709189 -    -3   -3.8505   ACTAATAGGACGAAA                CAAT CCGC ATTG                 CCAGGCACCATCAGG  56 412
    Ajs_2543 NONE
    Ajs_2542 NONE
    Ajs_2541 2705917 .. 2705958 -  -8.6  -4.40963   AGCCGCTAAAAAGAA CCGGCCGGAGCTGACCGCC CTTCT GGCGTACAACTC-GGCCGC AGGCCGACCATCGGC  84 180
    Ajs_2540 2704873 .. 2704923 - -14.1  -2.76696   CCCCGCGCGAATAAG GGACA-GTGAAGAAGGACAACCGG CTTG CCGGTGGGCCTACTTCACATATCC TGCCCGCCTTACGGC  72 223
    Ajs_2539 2704273 .. 2704298 -  -6.9  -2.78384   CGTTGGGCCATCACA         GAGACAGC-ACG CCA CATCGCTGTCCC         GGTACCCGACCTGGG  49 157
    Ajs_2538 NONE
    Ajs_2537 NONE
    Ajs_2536 NONE
    Ajs_2535 NONE
    Ajs_2534 2700911 .. 2700935 - -15.7  -2.71144   CAGGCCCGGGAATGA          CAAGGGCGGCC AAT GGCCGCCTTTG          CTGCTCCTGGTTCGC  78 45
    Ajs_2531 NONE
    Ajs_2530 NONE
    Ajs_2529 NONE
    Ajs_2528 NONE
    Ajs_2527 NONE
    Ajs_2526 NONE
    Ajs_2525 2689083 .. 2689116 - -12.4   -4.3467   ATTTTTAGAGCAAAA     GACCAACGCCCGGT GTTCAG ACCGGGCGTTGTGC      GGAAGTTGACGGGGG  91 182
    Ajs_2524 NONE
        ligD 2684987 .. 2685007 - -16.1  -3.76888   CAGCGAGAAGAAATA            GCCCCGGCC GAT GACCGGGGC            GCTTCAAAGGATACA  93 122
    Ajs_2522 2683860 .. 2683880 - -12.5  -2.52464   TGGGGCCGGAACTTA            GCACGCCGC GCT GCGGCCTGC            CCGCGCCCACGTCAA  67 134
    Ajs_2521 2682243 .. 2682279 -  -5.7  -4.53398   CAACATCAAAAAGAA    TAGCTGGCGGCGCTTAC GCC ATAAGCGCTGCCCTCAA    AAAACTACCCCAACT  76 30
    Ajs_2519 2679222 .. 2679242 -  -6.7  -3.76224   GCCGCAGGCATGAAA            CGGTCCGGC GAC GCTTGACCG            CTATTGCCAGGGAAG  62 69
    Ajs_2513 2673360 .. 2673372 -  -9.1  -2.62263   ACGTGCGCGAGATGA                TGGCC CAG GGCCA                CGTCGTGGGGTGGTT  54 405
    Ajs_2510 2671725 .. 2671751 -  -4.4  -2.91873   ACCACGCCGAAATCA        CCTG-GACGCG CGACGC CACGCCGCAGG         ACTTCCTCAAGAACC  44 491
    Ajs_2502 2665524 .. 2665547 -  -2.4  -2.57132   CGCGCGCGCCAGAAC          CTGGCG CGCCTGTGCTTT CGCCAG           CAGGCCGCCCTGCGC  38 327
    Ajs_2500 2663899 .. 2663930 -  -2.9  -3.06492   GCATCGATTTTAATA      GCTGCCAGCGCTTG AGGGA CGCGCGCTAG-AGC      GGCTTTTTGTCTTGA  43 19
    Ajs_2499 2663024 .. 2663036 -  -4.8  -3.50853   CCGCCTCAAGGACAA                GCTG CATCC CAGC                GACATTGCCGAGGCC  52 150
    Ajs_2493 2657130 .. 2657148 - -11.6   -3.6502   CAGCCCTCAGGGAAA             GCCGGCGC GCC GCGCCCGC             GATCAACGCGCCACG  75 28
    Ajs_2492 2655749 .. 2655765 -  -7.9  -3.71649   TTGGGAAAGTTGAAA              TGCCGCC GGC GGCGCCA              GGCGCGCGCTCACTG  65 35
    Ajs_2491 2654307 .. 2654319 -  -6.3  -2.73364   GGCTCATTGCAACCA                GATGA AGG TCATC                ACGACGAACAGCGGC  49 1
    Ajs_2490 2653191 .. 2653227 -  -3.6  -4.29049   TAACTATCAAAACAA    TAGCTGCCAGCGCTTA TGCAT CAAGCGCCAGAGGCCA    ATTTCATTCACACCT  64 33
    Ajs_2489 NONE
    Ajs_2488 2649893 .. 2649903 -  -8.2  -3.78775   TGCCGCACGAGCAAA                 GCGG CAA CCGC                 TTCATCTCGCCCTCG  68 404
    Ajs_2482 2645114 .. 2645148 -  -2.8  -3.46336   ACTTCAAGCCAAACA     GGCCTCTAGCGCTT TACCGAC AAGCGCTAACAGCT     ATCAAATAAATAGCA  49 45
    Ajs_2480 2639404 .. 2639443 -  -7.3  -4.18197   ATTTGCTATTGAAAA  TATAGCTACTAGCACTTG ACCAG CAAGCGCTAG-AGCCTTA  TTTCACTCAAACCCA  72 42
    Ajs_2463 2619960 .. 2619975 - -11.8  -5.66684   TAAGGCATAAAAAAA              GCCCCG TTGC CGGGGC               TTTTTTGTGACCGAT 100 48
    Ajs_2462 2619195 .. 2619217 -  -2.7  -3.53811   CGCACCGCCGTGAAA          GACAACTCGC TCAT GC-AGTTGGC           CGCCTGGTAGCGAAC  49 13
    Ajs_2461 2618098 .. 2618124 - -15.3  -5.80003   TTAACAAAGAAAAAA         GGCGTTCATTG GACTT CAATGAACGCC         TTAGGACAGTGTAAT 100 432
    Ajs_2460 2616615 .. 2616628 -  -2.3  -3.28684   AACGACTGACAGCAA               CCGCT GCAT ACCGG                TCAATTCGCCTGCGG  45 90
    Ajs_2459 NONE
    Ajs_2458 2612575 .. 2612589 -   -10  -2.71681   GAATGGCCGCAATCA               GGAACG AAG CGTTCC               TTCGAGCCTCGACGG  60 325
    Ajs_2457 NONE
    Ajs_2456 2611435 .. 2611453 -    -8  -3.21199   TATCCACGAATTGAA             CGCCGCCC CAG GGGCGACC             AACATCACAGCACCG  56 30
    Ajs_2455 NONE
    Ajs_2454 NONE
    Ajs_2453 NONE
    Ajs_2452 2606703 .. 2606717 -  -2.7   -2.5655   CGCACTGACATCAAC               GGTCG GGCTG CGGCC               ATCGAGTGCTATTTG  39 342
    Ajs_2450 NONE
    Ajs_2449 2603721 .. 2603751 - -17.7  -3.01422   CATCCCCACAAAGCA       CAAAGCCCTCACC GCAAT GGCGAGGGCTTTG       TCTTGTATGTGAATG  90 89
    Ajs_2448 2602591 .. 2602634 - -21.1  -4.56597   TCTCTCCTTCAAAAA TGCATAGGACCCGTCTGCC TTCACT GGCGGACGGGTCCTATGCG TTGGGTTGGTTGTAT 100 48
    Ajs_2447 2601472 .. 2601500 -  -2.4  -2.72511   TGCACGCCTTCAAAT       TGGACGT-CGTCA GCCA TGACGGACCTCCT        GCCGCATCCTTCTTG  39 6
    Ajs_2446 2600687 .. 2600699 -  -6.3  -2.76313   ACAACTGGAAGATGA                CATTG CTG CAATG                TTTGCCAGCTCAACA  49 155
    Ajs_2445 2599734 .. 2599750 -  -4.3  -3.40403   GGGTCTGGACGAGAA              GGTCAGC CTG GCCGACT              TCGACTGGCGTTTCA  51 524
    Ajs_2441 NONE
    Ajs_2440 2594838 .. 2594862 -   -10  -2.78816   CGATCCGCCACCACA         CTGCCG-GGCA TTAC CGCCCCGGCAG          GTCCGCTGACGGATT  60 122
    Ajs_2439 2593820 .. 2593842 -  -8.4  -2.70932   GGCGGCGCGCAACTA           CCACCACG CTGGCTT CGTGGCGG           GCATGCCCGTGGAGT  52 239
    Ajs_2434 2591089 .. 2591127 - -12.4  -3.34398   CCGCTGGCGCAAAGA  GGTGCGCCGC-CGGCAT CACGAC ATGCCCTGCGGCGCGCC   AGCCCCTTTCAGGAA  72 2
    Ajs_2430 NONE
    Ajs_2429 NONE
    Ajs_2428 2582551 .. 2582567 -  -8.7  -3.48276   CGGCGCTTTAGATAA              GCGCTAG CAG CTAGCAC              ATTCATAGCACCTAG  63 93
    Ajs_2421 2571557 .. 2571599 -  -9.1  -3.21099   CGCGGTCAGCATCAA CACCACGG-CGGCAGGC-GGC AAT GCCAGCCTGATGACCATGGCG TGATGCCAGGGTAAA  61 94
    Ajs_2419 2567293 .. 2567321 - -18.9  -3.59979   CGGGCTGATGGGAAA        CACAACGCCCGCA CGA CGCGGGCGTTGCG        TCTTCCGTACCGAGG 100 45
    Ajs_2414 NONE
        rumA 2562558 .. 2562594 -  -8.6  -4.84359   GCAGTTGGAGAAAAA   GCCCGCCAGT-CGCCGC GCAA GCGACGAAGAGGCGGAC    CTGCAGACCGAGGGT  86 141
    Ajs_2410 2560693 .. 2560708 -  -7.5  -5.17353   ACACCCATGAAAAAA              CCGGC CCACGC GCCGG               TTTTTTTGTTGGGAC  93 123
    Ajs_2403 2556336 .. 2556378 -  -2.4  -3.63515   CGTCATCGGCAAGAA GCTCACCGGCGCGCTGGGGC CAC GGCGCATCACGGCGCTGATC AACCTGTGGGGCTTC  51 386
    Ajs_2401 2554080 .. 2554101 - -15.1  -4.70583   TGCAGCAATAGAAAA           GCCCGAGGC GGGG GCCCCGGGC            TTCTCGCATCAACCA 100 47
        thrS 2551869 .. 2551885 -    -8  -4.86621   ACCTTCAATTAAAAA              GCTACG AAAAG CGTAGC              AGCTTACGCACCAGG  88 61
    Ajs_2399 2551152 .. 2551173 - -15.1  -3.54543   AGCCACTTTTTCAAA           CGACGCGCC TTGC GGCGCGCCG            TGCGGCGGCACTTGC  86 96
        rpmI NONE
        rplT 2550399 .. 2550432 - -16.1  -4.85782   CTCTTGAAAAAGAAA     CAAGGGCTAGTGCCT TTTC AAGCCCTAGCCCTTG      TTGTTTGCGCGCTAG 100 74
        pheS 2549302 .. 2549314 -  -3.3  -3.64259   AATTAGGTTTAACAA                GCGCT GGC AGCTC                ACTTTTTTGCATTAC  51 37
        pheT NONE
        ihfA 2546392 .. 2546403 -  -2.2  -4.56597   TCTCTGGGCCAAAAA                CACCG GTT CGG-G                TCAACTACTTCAAGC  68 35
    Ajs_2393 2545743 .. 2545768 - -19.1  -4.56978   GCGCCAAAGAAGAAA         GGGACCACCGT TTTT ACGGTGGTCCC          TTTGGCATAAATGGT 100 141
    Ajs_2392 NONE
    Ajs_2391 NONE
    Ajs_2390 2540587 .. 2540619 - -17.8  -4.70659   TTCCAGATGCAAAAA     GCAAACCGCCGCGCG TTGC CGCGCGGCGGTCT-C      ACAAATCAAGGGCGA 100 90
    Ajs_2389 NONE
    Ajs_2388 NONE
    Ajs_2387 2538707 .. 2538725 -  -8.8  -3.15544   CGCCACTGGCACGAA             TGACGAGG TCG CCCCGCCA             CGAAGCGGGGCGGAG  58 67
    Ajs_2384 2536691 .. 2536708 -  -4.7   -3.1505   AGCACCGCCCATTAA             CCCCGGC ACAG GCCATGG              TCAAGGCGCTGCGGT  48 40
    Ajs_2383 2534623 .. 2534639 - -10.8  -4.74013   GTGAAATACAGAAAA              CGGGGC GCGAG GCCCCG              TTCTTCATGCCAAAC 100 46
    Ajs_2382 NONE
        glmM 2531944 .. 2531966 -  -7.6  -3.36327   GGAGCTGACCGAGAA           CGTGGCCGTC GCG GACCCCCACG           CCGCGATCGCGACGA  59 449
    Ajs_2379 NONE
    Ajs_2378 NONE
    Ajs_2377 2525953 .. 2525982 - -10.7  -2.72043   AAGCGCCCCTCAAAG       CGGCCACCAA-GGC AGC GCCATCTGTGGCCG       ACAAAGAAAAAGACA  60 328
    Ajs_2372 2521223 .. 2521271 -  -5.8  -4.07885   GATTGCCTTGTAAAA CAGGGGAACCGGTGGCCCCACCC GGGA GGGCGGG-CCACCGTGTCAGCTT ACTTCAGGGCGATGG  65 24
    Ajs_2371 NONE
        pstA NONE
    Ajs_2369 NONE
    Ajs_2368 NONE
    Ajs_2367 2516999 .. 2517021 - -10.5  -5.64873   GTCAACAACAAAAAA           GCGCCCGCA TCATC TCCGGGCGC           CTGAAAAAACACGGG 100 59
    Ajs_2366 NONE
    Ajs_2356 NONE
    Ajs_2355 2497370 .. 2497386 -  -4.3  -3.18264   TGGGTCATCGATCAA              TCGGCAG AAT CAACCGA              TGGTACCTACCCCTG  47 98
    Ajs_2354 NONE
    Ajs_2353 2494953 .. 2494978 -  -5.3  -2.78384   GCGCTGGCGATCACA         GTTGCAGCCGC GCGT ACGGCTGGACC          TGCAGGCCTGGGCCC  45 350
    Ajs_2350 NONE
    Ajs_2349 2491118 .. 2491137 -  -4.8  -3.60098   ATTTCGGAGTGCAAA            CGCCGCCC CCAA GGGCGTAG             CGAGCGCCTGCCAGG  55 140
        recR NONE
    Ajs_2347 2489640 .. 2489668 -  -6.6  -3.14881   CAACTGGCGCACCAA       GCGCGTGGCC-CT GGCC AGCGGCTGCGCGC        TGGTGCTGTGCAACC  51 388
        metN NONE
    Ajs_2344 2486444 .. 2486462 -  -4.4  -4.07568   GGTCTTCTGTCAAAA             CAGCCCGC AGC GCCCGCTG             CACAAGCGCCAGAAG  61 89
    Ajs_2343 2485194 .. 2485229 -    -4  -2.72511   CTGAGGGGGTGAAAG   GCCGC-GCATTCTCCA CCTCCC CGG-GAAGGCCGCGGC    GCCGCCCCGTCAGCC  42 54
    Ajs_2342 2484187 .. 2484202 -  -2.4  -3.48276   GCTGCTGTCAGACAA              GCGGCG GTCA CGGCAC               CGGGGCCGGGGCTGG  47 76
    Ajs_2341 2483439 .. 2483464 - -18.3  -4.86731   CCCCGCCAAACAAAA         CCCGCCTCCGGC CAT GCCGG-GGCGGG         TTTTTTCTATAAAAA 100 96
    Ajs_2339 2481592 .. 2481606 -  -2.8  -4.28994   TACCAGCTATCAAAA               GCAAAG CAC CCTTAC               ATCGCCCCCCACTGG  64 99
    Ajs_2338 2480278 .. 2480288 -  -8.2  -4.07568   CGCCGCCGGTCAAAA                 GCCG GTG CGGC                 CCACGCCCGCAGGCA  73 129
    Ajs_2337 NONE
    Ajs_2336 NONE
    Ajs_2335 NONE
    Ajs_2334 2476700 .. 2476745 -  -7.3  -2.73994   ACGGGGTGAAGACGA GGTGAAGCGCCGCGGGGCGCC CGAA GGCGCCCCGCGAGAGGTCAAA AAAAAACGCGTAGTT  52 39
    Ajs_2328 2469481 .. 2469503 -  -9.9  -3.31144   GGGCGACGGCGAGAA           GCTGCTCAA GCGCA TCGAGCAGC           GCGCGCGCATGCTGG  63 196
    Ajs_2325 2465307 .. 2465326 - -13.6   -5.1287   GTCAGACGCAAAAAA            GGCCGTGA ATCC TCACGGCC             TTTCTTTGTCAGCGG 100 51
    Ajs_2323 2464136 .. 2464153 -  -6.9  -3.28712   CCCCGTGCGCTACAA             CGGCAGC CAGC GCCGCCA              CGCTGCCACGCGCCT  55 2
    Ajs_2321 NONE
    Ajs_2320 NONE
    Ajs_2319 NONE
    Ajs_2318 NONE
    Ajs_2317 NONE
    Ajs_2316 2456742 .. 2456755 -  -9.5  -3.28712   GCTCGCGCGCGACAA               CGCCG CGCA CGGCG                TGAACCTGCAGGTCT  61 433
    Ajs_2314 NONE
    Ajs_2313 2450022 .. 2450042 - -10.4  -3.27298   CGCGCCAAGCATGAA           CGGCC-CCG CCCA CGGCGGCCG            GTGGCGGCACACCTG  66 71
    Ajs_2309 2446862 .. 2446872 -  -2.4  -3.16564   TGTCGAGCTGACGAA                 CCCG CCG CCGG                 CTCCCGCCAACGCCC  43 98
    Ajs_2302 2441203 .. 2441233 -  -3.9  -3.35849   TGTAGGAAAGTAATA       GCACTCGCCGC TGTAGGCGG GCGGCGACTCC       TGCCCTCTGGTACGG  48 59
    Ajs_2301 2440463 .. 2440488 - -20.5  -5.22312   AGCCAGACGAAAAAA         CGGCCCGCAGA TTCC TCTGCGGGCCG          TTTGTCTTTGGGTCG 100 75
    Ajs_2300 2437886 .. 2437911 - -18.3  -5.75342   GGCGTGCAAAAAAAA         CCGGCCTCCCC TTGC GGGAAGGCCGG          TGACGGCCAGGTGCC 100 73
    Ajs_2297 2435276 .. 2435294 - -13.1  -5.44119   GCTAGGGCAAAAAAA             CCCGCCG ACCAG CGGCGGG             CCCAGTCACGCACCC 100 57
    Ajs_2295 2433579 .. 2433621 -  -3.3  -4.25104   GCGCCCTGACGAAAA GGCCCAG-CGCTGGCTCA TCAGCATT TCCGCCAGCGACCGTGCC GGCCTGCTGTACCTG  63 267
    Ajs_2290 2424479 .. 2424520 -  -5.7  -3.86346   CTATTTCGTCACAAA CGGCGGCATATGGC-CTCAC TCA ATGCGTGCCATTGGCAGCCG CCTTGCCGCGCAGCC  62 3
    Ajs_2289 2423705 .. 2423726 - -18.7  -5.67063   CCGAGGATAAAAAAA           GGGCCGGCG CATG CGCCGGCCC            ACCCCACCATGAAGA 100 56
    Ajs_2288 NONE
    Ajs_2287 2421050 .. 2421066 -    -8  -3.06261   TGGCAAGCGCTAATA              GCTCCT GATTT AGGAGC              ATACCCACTGCTCAG  54 37
    Ajs_2284 NONE
    Ajs_2283 2415700 .. 2415732 -  -3.3  -3.03124   GCTCATCTTTCAATA      GCTGCTCGCGCTT GATGGGT AAGCGCTAGAGGC      CATTTTGGCCATCAA  43 37
    Ajs_2282 NONE
    Ajs_2281 2413454 .. 2413504 - -12.5  -2.89564   TGCGCAGCGCATACA CCGCGGCCACGCTGCCGGCCAGCA GCAG CGCTG-CCACCAGCGCCACCACGG CGCCCGCGCCGATGC  70 147
    Ajs_2279 2410507 .. 2410535 -    -3  -3.14132   GGCCCTGCGCAGGAA       TGGCGTCG-GCGC TCAT GCGCGCTCCACCA        CGGTGGTGATCTCGG  44 9
    Ajs_2278 2409564 .. 2409599 - -10.6  -5.00616   TCGCTCCTGAAAAAA    TAGCTGCTAGCGCTTAC CTA ACAAGCGCTA-CAGCCA    ATTTTTCTCTCAACA 100 43
    Ajs_2274 NONE
    Ajs_2273 NONE
    Ajs_2272 2402824 .. 2402860 -  -8.7  -3.27951   TAGCGCAGGAGAAGA   TCCCCGC-CACGGTGG TCAACG CCAGCGTGAGCGGCGA    CACCACCGCCGGCGG  58 453
    Ajs_2270 2401430 .. 2401444 - -11.4  -3.17051   GCGCCACCATCAACA               TGGCCG GCG CGGCCA               TCACCATCAGCGTGC  66 453
    Ajs_2268 2399421 .. 2399443 -  -4.6  -2.62184   TGTCCTGGCAGATCA           CGCCCGTGGC CTT GACCCGCGCG           GTGACCGACCCCGAC  42 148
    Ajs_2263 NONE
    Ajs_2262 2395931 .. 2395968 - -18.4  -2.90392   CACGCGCGAAGCACA   CG-GCCGCGCCCAGGGC GCTGG GCCCCGGTCGCGGCACG   TCTTCTTTCATCCGG  90 214
    Ajs_2261 NONE
    Ajs_2258 NONE
    Ajs_2257 2392441 .. 2392455 -  -5.6  -3.16881   GAGCCATTGTAGGAA               CGGGCA CCC TGCCCC               GCCGCGCAATTGCGC  51 73
    Ajs_2256 2391765 .. 2391806 -  -6.6  -3.72576   GGCTTGGGCACCAAA GCGCAT-TGCCCCGGCGGTGG CAT CCGCTGCCGGG-CATATGC-C ACCCATTTTGCTATC  62 88
    Ajs_2254 2389504 .. 2389527 -  -8.8  -4.07568   CCCCGTCGGTGAAAA          GCCTGTGGGGC CAC GCCCCGCAG-C          AGCTCGGTGCCCGAC  73 184
    Ajs_2250 2385363 .. 2385373 -  -2.4  -2.52543   AGGCGCGTCAACCCA                 GGGC CCG GCCA                 CGTTCCTCGAAGCGC  37 7
    Ajs_2249 2384276 .. 2384287 -  -2.2  -3.61715   CATGGTCGTGAAGAA                GGTCC AGG GG-CC                ATTGTGGATGAGCCG  49 45
    Ajs_2248 NONE
    Ajs_2247 2381417 .. 2381428 -  -3.6  -3.78022   TGGACACGCAGGAAA                CGGC CGCC GCCA                 CCCTGCTCGCCGCCC  57 161
    Ajs_2243 2376021 .. 2376036 -  -5.4  -2.70932   GCTGTTTGCGAACGA              GGAGGCG GCG CGC-TCC              GCAGGCCAGGCGCTG  45 361
    Ajs_2241 NONE
    Ajs_2239 NONE
    Ajs_2238 2370914 .. 2370937 -  -2.2   -4.2828   CTCCAGTGAGGAAAA          CCTCCTTCAC TCCC GTGCCGGCGG           CCACTGCTGCGCGGC  62 8
    Ajs_2237 2370643 .. 2370660 -  -3.3  -3.05715   AAGGCCGTCAGTCAA             CAAACCG CAAT CGGCGTG              CGCCCGGTTTGTCGG  43 65
    Ajs_2236 NONE
    Ajs_2235 NONE
    Ajs_2234 2368635 .. 2368645 -  -3.2  -2.78384   GGCGGGGCCAGGAGA                 TGCC GGC AGCA                 AGGAAGCCGATTGAT  40 249
    Ajs_2233 2366416 .. 2366460 - -14.2  -2.77899   TTCGTGGAGCAATGA CCTTCTCGCCCCGTC-GCCCG ACGG CGGGCAGACGGGGCGCGCACA CCGTTGCAGAAGGAG  75 124
    Ajs_2231 NONE
    Ajs_2230 2365047 .. 2365082 - -16.3  -2.70525   TCCTGCGAAAGGAAG    GAGGGACATG-GCCCC GAACG GGGACGCATGTCCCTC    GTGGGGTGGGATGAA  81 66
    Ajs_2229 2364122 .. 2364141 - -10.7  -4.40561   TTCCGCGAAAAAGAA            GAGCCCC GACGTG GGGGCTC             GAATGGGTTGCGGGT  95 40
    Ajs_2228 2363030 .. 2363060 - -12.5   -4.2558   CAGGGGGCAGGAAAA       GAGGCTTCCCGCC GCGAG GGCGGGAAGCTGC       TGTGAGATCAGTGCC  95 33
    Ajs_2227 2362606 .. 2362624 - -17.4   -3.6761   TGCCGGGAAGAAAGA             GGCCCCCG GAG CGGGGGCC             AGGGATGGGCGGTCA 100 38
    Ajs_2226 2361713 .. 2361736 - -13.9   -2.7535   CGGGCGAAGAGAGGA          CAAGGCCCC GAGGAT GGGGCCTTG           CGGATCAGAACGACT  72 30
    Ajs_2225 2361004 .. 2361041 - -13.3  -4.15044   GTCTCCTTGAAGAAA   TGGCCGGAGCCCTCCCC GTCG GGGGAGAACCCCGGCGG    GTGGCGGAATGCCGC  89 58
    Ajs_2224 2360557 .. 2360591 - -12.8  -3.66908   CCTCTTGAAAATGAA     GGAGCAACCACAGCCC GCG GGGCCATGCTCGCCCC     GGTTGGGTGGAAGGA  77 53
    Ajs_2223 2359846 .. 2359874 - -12.3  -3.10164   TGATGGATGAGGGAA        GGCGGGCACGCGC GGC GCGCATGCCCGTG        GGGATGGCTCACGCC  68 34
    Ajs_2222 2358630 .. 2358664 - -17.8  -3.61398   CTCCTTCTGGAAGAA     GGGGCCACGGCACCCC ATC GGGGCGACATGACCCC     GGTGGGTGGATGAAA 100 69
    Ajs_2221 2358208 .. 2358248 - -25.5   -3.2614   GATGCTCCAGAGCAA  TGGGGCATGTCACCTCCCC CAC GGGGCGGTGACATGCCCCT  GGGTGGGAAGAAAGA 100 78
    Ajs_2220 2355884 .. 2355903 - -16.4  -4.71426   GGCGCACCAAGAAAA            GCGGCCCC CGAA GGGGCCGC             CAAGTCCAGCACCGC 100 41
    Ajs_2219 2353921 .. 2353931 -  -4.6  -3.53012   TTGCGCTGCGGCAAA                 GACG GTA CGCC                 GTGAGAACACCAAAG  53 121
    Ajs_2213 NONE
    Ajs_2212 2346380 .. 2346408 -  -2.1  -2.71144   GAGCCGCCTCAAGGA        GGCTGAAGCCCCC TCG GGGGGCAGCGAAC        GAAGTGAGCGTGGGG  39 54
    Ajs_2211 NONE
    Ajs_2210 NONE
    Ajs_2209 NONE
    Ajs_2208 NONE
    Ajs_2207 2341520 .. 2341550 -  -8.9  -3.05343   GGTACACGCGCAACA      GGGCGCCCGGCGCA CCGC TGCGC-GTTCGCCC       CACTGAACCGGCGTG  57 60
    Ajs_2206 2340461 .. 2340491 -  -5.2  -3.28447   CGATGGAGCAGAACA       TGGAGGCCGGTGTG CTT CTCACCGGCGGGCA       GATTCCCAAGCTGCT  51 144
    Ajs_2200 2328769 .. 2328798 -  -2.9  -3.33492   CGATGCACGCCAGAA      GC-TCGACG-TGC CGGAGC GCATCGCCGATGC       GTTCATCGCCGAAGT  46 219
    Ajs_2194 NONE
    Ajs_2193 NONE
    Ajs_2192 2320182 .. 2320197 -  -4.6  -2.52464   GGGTCTCCGAAGGGA              CGGCCA TCGC TTGCCG               CCCTCACAGCACGCC  43 29
    Ajs_2191 NONE
    Ajs_2190 2319087 .. 2319109 -  -6.2  -2.57985   CGACAAGGCAACGGA           CTTCATGGAG AGT CTCCCTGCAG           GTGGCCGGAGGCGTT  46 5
    Ajs_2189 NONE
    Ajs_2188 NONE
    Ajs_2187 NONE
    Ajs_2186 NONE
    Ajs_2185 2312658 .. 2312672 -  -8.5  -3.14211   ACGGGTTTCGATCAA               CGCGG ACGAG CCGCG               CCGCAGCCTTGAAGA  58 48
    Ajs_2184 2311952 .. 2311970 -   -16  -4.05788   GTCGGCGAAAGGAAA             CGGGAGCC AAG GGCTCCCG             TGGTGATGACATGAA 100 60
    Ajs_2183 NONE
    Ajs_2182 2310456 .. 2310468 -  -5.5  -3.83026   GTTCCTCACATGAAA                TCGAC GCT GCCGA                GGAAGACCTGACCAC  62 3
    Ajs_2181 NONE
    Ajs_2180 NONE
    Ajs_2179 2307006 .. 2307019 -  -8.1  -3.06796   CTGGATGGTACGCAA               CGTCG ATGC CGACG                AAAGCAGTGATGATG  53 146
    Ajs_2177 NONE
    Ajs_2176 2304659 .. 2304671 -  -6.2  -2.54192   GAGAGCATGACGAAC                CCCG GATGA CGGG                CTGCTCGGGGCGCCT  45 208
    Ajs_2175 2302503 .. 2302513 -  -8.2  -3.64822   AGCGTTCGATCCAAA                 GGGG CCG CCCC                 ACCGGCACCACTACC  65 319
    Ajs_2169 2296677 .. 2296732 -  -8.9  -3.20941   CACTAACCACGAAGA CGGC-GCAATGACTACGAACTGCGCG TGGAT CACGTAGCCCGGAGACGTTGCCGCCG CGAACGTCGGCTCCT  58 57
    Ajs_2150 2272036 .. 2272050 -  -2.8  -3.44146   GTCTCCTATAAGGAA               GCTGAT TCG ACCAAC               ACCGGTCAAAATAGT  49 111
    Ajs_2149 NONE
    Ajs_2148 2269287 .. 2269315 -  -3.6  -4.19238   CGGGCAAGCGCAAAA        CCGGGCGCATCC GCAAG GGCAACGCCTGG        GTCAGAAGGCTGCTG  65 413
    Ajs_2145 2267077 .. 2267094 -  -2.6  -3.38986   CATCAGAAAGCAATA             GGGTCG ACGTGG CGAGCC              CGCCCCGCGCGCAGC  45 69
    Ajs_2144 NONE
    Ajs_2143 NONE
    Ajs_2142 2264991 .. 2265015 - -12.8  -6.09888   TGGCAATAAAAAAAA          CCGCCAGCGC GGCGG GCGATGGCGG          TCCTGTGCAATAAGC 100 55
    Ajs_2141 2264409 .. 2264436 - -10.4  -4.10429   AATGAGTGTGGAAAA        GCCGGGGCCCGC AAGC GCACGCCCAGGC         AGGAGTGACCGAATA  78 47
        hscA NONE
    Ajs_2139 NONE
    Ajs_2138 2261172 .. 2261200 - -16.7  -5.45652   AGCGCCAAGAAAAAA        CCCCTTGCGGCCA TAC CGGCTGCAAGGGG        TTCGGATTGGTGGGT 100 263
    Ajs_2137 NONE
    Ajs_2136 NONE
    Ajs_2135 2258406 .. 2258436 -  -3.8  -3.37796   GCCGAGCAGGGACAA       CCAGTTCATGCGAG CCC CTCCCAGGCGCTGG       AGCGCGCCGCAGCGT  48 71
    Ajs_2134 NONE
    Ajs_2133 2257660 .. 2257674 - -12.8   -5.4505   CGGGCCAAGAAAAAA               GGCCGC GAT GCGGCC               TGATAGAGACTGTGG 100 50
    Ajs_2131 2255418 .. 2255448 - -11.8  -2.84634   CTGTACACCAGCAGA       GACTGCGTGCCCTG CAA CAGCGCGCGCAATC       TGCTGATCAACCGTG  63 438
        aceE NONE
    Ajs_2124 NONE
    Ajs_2123 2242276 .. 2242312 - -18.2  -3.64703   GTTTGGGTACGCAAA   GCACAAGGCCCGAACCG TCGC CAGTTCGGGCCTTGT-C    AGGGTAGCTTGGCTG 100 46
    Ajs_2122 NONE
    Ajs_2121 NONE
    Ajs_2119 2236893 .. 2236905 -  -5.5  -3.88291   GATCACCCGCAGAAA                GATGC GCA GCACC                ATGCTCAGCACCGCT  62 345
    Ajs_2117 2235254 .. 2235308 -  -5.6  -3.30771   GTACATCGGCGACAA CTCGATCG-GCCGCATCGAACTGCG CGACAT CACCGATCTGCGCGGCACGATCAAG GTCTGGGGTCACTGA  52 62
    Ajs_2115 2233871 .. 2233892 -  -3.7  -3.14344   GATGCTGGCGACCAA           GGAGGTCATC GCC GA-GACCTTC           CAGCCGCTGCCGCTC  45 142
    Ajs_2112 2231711 .. 2231728 - -12.7  -4.54727   CGGCGGAAAGGAAAA             GGAGGCC CAGC GGCCTCC              TTTTTCGTTTCCGTC 100 39
    Ajs_2110 2230116 .. 2230152 - -18.2  -3.64703   GTTTGGGTACGCAAA   GCACAAGGCCCGAACCG TCGC CAGTTCGGGCCTTGT-C    AGGGTAGCTTGGCTG 100 198
    Ajs_2108 NONE
    Ajs_2105 2226544 .. 2226595 - -17.8  -3.26596   TCGAAACCAACTGAA TGCCGGGCCGTGCCGCCCCG-GCGC CTT GCGCGCGCGGCGGCACGGCCAGTGG CTCAGCCCGCGACGC  93 27
    Ajs_2102 2223072 .. 2223086 -    -7  -3.53012   GCCTGGCGCCTCAAA               GAGGCG CTG CGCCGC               ATCTACGAGATGGCA  58 305
    Ajs_2100 2221185 .. 2221222 -  -7.6  -3.14132   TTGTGCTCGCAGCAA   CGCCCCGGACTACCCGC TCGCG GCTTG-AGTCCGGCGCG   TTGCGGTTGACGATC  56 39
    Ajs_2099 2220152 .. 2220162 -  -3.2  -2.77166   GGATTTCAAAAAATG                 GCAG GCG CTAC                 ATCGAAGCGGCCATT  40 115
    Ajs_2098 2218943 .. 2218953 -  -6.8  -3.02511   GGTAGTCCGCCAACA                 CCTG GCC CAGG                 TAGGCGTTGAAGCGC  51 133
    Ajs_2096 2217005 .. 2217021 - -13.7   -5.4588   CAAAAGCATAAAAAA              GGCAGCC AGA GGCTGCC              TTTTTTGCTACGGCC 100 48
    Ajs_2094 NONE
    Ajs_2093 2214563 .. 2214579 -    -5  -3.16742   TCCAACCTTCATCAA              CCCGCC CCCTT GGCGCG              CAGCAGCGCTACCAG  48 5
    Ajs_2090 2211415 .. 2211430 -  -3.2   -3.5756   ATAACAATAGCACAA              GAGACC GACG AGTCCC               GGTTCAGCTCTGCTC  51 29
    Ajs_2088 2206115 .. 2206144 -  -3.4  -4.18197   ATGCGTGATGGAAAA       GAAGGCC-GCGGC GATCA GACGCCGGCCCGC       TTCAGCACCAAGGCC  61 10
    Ajs_2087 2205698 .. 2205734 -  -3.6  -4.87291   GATTGCAAGCAAAAA    TGGCCTCCAGCGCTTA TCCAG CAAGCGCCAGCAGCTA    TTCTTACGAGAGCAT  75 52
    Ajs_2086 2202057 .. 2202071 -  -2.7  -3.04144   TGCTCATGGTGAATA               CGGGG TCAGG CCTCG               GCCATGGACAGCGCG  41 16
    Ajs_2085 NONE
    Ajs_2084 NONE
    Ajs_2083 NONE
    Ajs_2082 2197229 .. 2197270 - -10.9  -3.35679   GCGCGGCAGGCAGAA CACGCGCCGCCGCGCCGGT CGCCGC ACCAGC-C-GCGGCGCCTG GCGACGGGCCGGGCC  69 120
    Ajs_2081 NONE
    Ajs_2080 2192824 .. 2192862 -  -2.2  -3.49135   CATACAACGAATGAA   CTTCCGCCGCCCCATCAA GCA TTGCCGCGCCTGCGGAAC   GGCCGTGGCCTACCG  48 523
    Ajs_2077 NONE
    Ajs_2076 NONE
    Ajs_2074 NONE
    Ajs_2073 2186942 .. 2186967 - -16.1  -5.24129   TGCGCCGACAAAAAA         GGCCGTACGGG CTTC CCCGTGCGGCC          TTTTTGCATGCAGGG 100 67
        fabG 2185967 .. 2185986 - -12.2  -5.36441   GGTGGAGACAAAAAA            GGAACGTG CTGC CACGTTCC             TTTTGCATTTCAAGG 100 65
    Ajs_2065 2176156 .. 2176178 - -11.2  -4.18494   CATCCGCATGGAAAA           TGCCAGCGGC CAG GCCACTGGCT           GGGCCGCATGGTCCG  89 323
    Ajs_2061 2170241 .. 2170299 -  -9.3  -3.14132   CCTGGCGCGCACCAA GCCGGGCGCCACCGCGCCCGATGCACTG CGCG CAA-GCGCCGTGCAAGCCGGCGCCCTGC CAACGGAGCCGCTCA  61 38
    Ajs_2059 2167820 .. 2167836 -  -3.6  -3.55444   GGGCCAGCCCGCAAA              GCCAGG TCATC CCCAGC              CGCGGCATGCTGGTG  51 268
    Ajs_2055 2165544 .. 2165560 - -11.5   -5.4251   GCCAGACACAAAAAA              GCCCGGC ATT ACCGGGC              TTTTGCAGGCTTGGC 100 51
    Ajs_2053 2163609 .. 2163620 -  -3.6  -3.68222   GGGGAAGGGGAAGAA                GCGC TCAT GCAC                 TGTCTCCGGAAGACG  54 18
    Ajs_2052 NONE
    Ajs_2051 NONE
    Ajs_2050 2160718 .. 2160737 -   -15  -3.17075   GGGCGGGGAACCGAA            GGCAGGCG CCGC CGCCTGCC             CCGCCCTTCGGGCTT  80 39
    Ajs_2049 NONE
    Ajs_2048 2158084 .. 2158115 -  -9.6  -3.08679   GCTCCTTATTTAATA      GCTGCTAGCGCTT ATCCACA AAGCGCTA-CAGC      CCATTTTTACTTGTA  60 45
    Ajs_2039 2146993 .. 2147020 -  -2.5  -3.37773   GACGGAAAAAAGAAC        GGCGGATGGGG GGCGGG CCCGGTCAGCC         CGCTGCCTCCAGCCC  45 20
    Ajs_2038 2144748 .. 2144777 -  -2.8  -3.72576   GGTTGGTGCAGGAAA       GCTATGCCGCCCA CATCC TGGGCG-CATCGG       TGCGCGGGCAGATGC  53 265
    Ajs_2036 2143261 .. 2143278 -  -7.7  -3.28003   TTAATAGAGCATCAA             CCGCC-CA CGC TGCGGCGG             TCGATCTTGCGGCTG  58 4
    Ajs_2029 NONE
    Ajs_2028 NONE
    Ajs_2027 2135000 .. 2135014 -    -7  -3.01712   CGTGGTGGCTCAATA               CCGGGG CAC CGCCGG               GTCGCGCTCATGCGA  51 5
    Ajs_2026 2133125 .. 2133137 -  -9.1  -3.53012   CCGTGCGCGCCGAAA                CAGGC TCC GCCTG                GCCCTACACGCAGCC  64 479
    Ajs_2020 2125128 .. 2125147 -  -2.1    -3.737   GAATCCTTCATTAAA            CGCGAAA TTTGCC TTTTGCG             CAGGCGCACCCAGCG  52 48
    Ajs_2019 NONE
    Ajs_2018 2123611 .. 2123631 - -12.5  -3.53091   AGGCGTCGGGTGAAA            CCCTGCCGC AGC GCGTCAGGG            TGTCTTTGTACCCGG  76 20
    Ajs_2017 2119512 .. 2119525 -  -9.5  -3.17763   TCGATACGCCATCAA               GCGGC TATC GCCGC                CGCCGGTGGTACGGG  61 8
    Ajs_2013 2114780 .. 2114821 - -14.4  -2.57683   AGACCTCGTGACAAC GGCC-GCG-CCCACGGCGGC CCTC GCCACAGCGGGGCGCAGGCC CCCCGTTTTTTTATA  74 36
    Ajs_2011 2113850 .. 2113869 - -16.4  -5.03994   CGGCATACAGAAAAA            GGCCCCCG CATG CGGGGGCC             TTACGGACCAGGGGA 100 51
    Ajs_2009 NONE
    Ajs_2008 NONE
    Ajs_2007 2109525 .. 2109557 -  -2.6  -2.64144   TTTGGAGTCAAATAG      GCCTCTAGCGCT TATCCATCC AGCGCGAGCAGC      TATGGTTTTTGAATG  38 41
    Ajs_2006 NONE
    Ajs_2005 2108062 .. 2108087 - -13.3  -6.09196   CTCAAAATAAAAAAA         GGCGCTGCAAC GCAA GTCACAGCGCC          TTTTTGCAGAAGGCA 100 57
    Ajs_2004 NONE
    Ajs_2003 2104731 .. 2104744 -  -5.9  -3.33696   GGTGCTTTTAAGTAA               CCCGA TACG CCGGG                CATTTGTGAGATGTC  52 220
    Ajs_2001 2102675 .. 2102685 -  -4.6  -3.34043   GGCATGATGGCAGAA                 CACG CGC CGCG                 CCCGCCCGTCAAAGC  50 34
    Ajs_2000 2102132 .. 2102173 - -19.5   -3.1706   AACGCACCGCATCAA CGGCAACAGCCGCCACCCCC GTG GGGGTTGGCGGCTGTTTC-G CTTCTGTTTTGATAG  95 140
    Ajs_1995 2095866 .. 2095877 -  -4.4  -2.52464   GTGTGGGTTAAGTTA                TACG TCAT CGTA                 CAACATCACTGAAAG  41 91
    Ajs_1994 2094790 .. 2094802 - -10.5  -3.53091   AGTCTTTCTTTCAAA                GCCGC TGC GCGGC                AGGTTGGCGACGTGG  68 87
    Ajs_1993 NONE
    Ajs_1992 2092787 .. 2092823 -  -4.9  -3.15999   GGGCGACAGAGGCAA    GGGGCGCCCGCACCG GCAACTG CGGCGCGGACGTCGA    GAGGGCGTGGCAATC  48 39
    Ajs_1991 NONE
    Ajs_1990 2090344 .. 2090363 - -12.1  -3.01712   TGTCGTGGCGGAATA            CCGCGCG ACCCAG CGCGCGG             TGCGTCCGGCCATTC  68 64
    Ajs_1989 2089846 .. 2089885 -  -9.8   -3.3782   CATGCAGGCAATCAA  GGGCGCGCGTGGAGCGCGA TTG TCGCCCGCC-CGCGTGCTC  AGAACGTGATCAGGA  66 24
         aat NONE
    Ajs_1987 2087947 .. 2087959 -  -4.7  -2.73875   GGTTCGGCAAGATCA                GCGGC TTT GCCGG                CACCGTGGGCTACGC  43 410
    Ajs_1984 2086019 .. 2086053 -  -9.3  -2.71144   CAGTGCTGGTAATTA    GCGCAGCGCTAGTGTTG ACT CTACAC--GCGCCGCGC    GGCCCACGCATTCAG  57 37
    Ajs_1983 NONE
    Ajs_1982 NONE
        trmB 2083140 .. 2083152 -  -4.7  -3.12668   CGGGAAACGGGAATA                GACGC TCA GCGGC                GCGTGAACACCAGGT  48 18
    Ajs_1980 2082085 .. 2082112 -  -8.3  -4.18018   CGGGGCTAGGCAAAA        GACGGCAGGCG CAGCAC CGTCTGCCGGC         AAATGGGCTAGAACA  76 33
    Ajs_1978 2077406 .. 2077424 -  -3.1  -4.46493   TCAAAGAGAGGAAAA             GTCCTTG TGTGG CAACGAC             TTGCAGACTCTCTTG  67 314
    Ajs_1977 2075036 .. 2075049 -  -2.3  -3.15056   ATTGGGAACGGAAGA               CCGTG CGGG CATGG                GTGCGTCGATGTACT  43 355
    Ajs_1976 2073616 .. 2073626 -  -4.6  -3.35522   CAACCTGCGCAAATA                 CGCC CGG GGCA                 TCCTCTCACGAAACC  50 78
    Ajs_1971 2069800 .. 2069826 - -17.3   -4.8543   CAACCTGCACAAAAA         GCGCCAGGCCT TCAGT AGGCCCGGCGC         TCGCGGACTCACCAG 100 34
    Ajs_1970 2069286 .. 2069338 - -24.7  -3.05384   CTTCGCGTTATCCAA CCCTCTGGCGCGGCCGAGCAGGCGC GCG GCGCATGCCCGGCCGCGCCCGCACG CTGGTGGCCGTCACC 100 36
    Ajs_1969 NONE
    Ajs_1968 2065793 .. 2065824 -  -8.7  -3.28712   GCTGCTGCGCGAGAA      GCTGCAGCGCTGGC GGCTG GCCA-CGGCGCAGC      AGTTGCAATCGGCGC  58 421
    Ajs_1960 2056020 .. 2056030 -  -2.4  -3.14132   CGGCTGCTGCAGCAA                 CGCG TGT CGGG                 GCGGCTCAAACTGCA  43 164
    Ajs_1958 2053056 .. 2053088 -  -9.1  -4.07746   TTGTCAAAAACAGAA      GCGCCCAGCGCTT GTCAGGT AAGGGCTGGGCGG      TATTTTGATGCTTGG  76 79
    Ajs_1957 NONE
    Ajs_1956 2051694 .. 2051730 -  -8.7  -5.30616   GCATCCAAATAAAAA    CAGCCGCCAGCGCTT ATCTATA AAGCGCGAGCAGCTA    TTGTTTTAAGAGCGT 100 49
    Ajs_1953 NONE
    Ajs_1952 2046942 .. 2046985 -   -13  -2.62616   TGATCCTGGATACCA CCGCACACC-CCGCCGGGCCC CCG GGGCCTGGCGCTGGCGTAAGG GCAACGGGCTGGCTT  67 39
    Ajs_1950 2043096 .. 2043112 -  -2.3   -3.0644   AGTCAAGCGCTAACA              GCTAT TAAAAAT ATAGC              ATTGCGCAGCAGCCC  41 46
    Ajs_1949 2041865 .. 2041892 -   -20  -4.83243   CGGATAGAAAACAAA        GCAGGAGCCATG GCGC CATGGCTCCTGC         GTGGGGTGCCAGTGG 100 79
    Ajs_1948 NONE
    Ajs_1947 2040033 .. 2040065 -    -4  -4.56597   CTTTTCGCCCAAAAA     TCTCCGCGCGA-AGC GCTG ACTACCGCGCGGCGC      ACGCTTCCCGTATTT  72 102
    Ajs_1945 2037672 .. 2037700 -  -3.6  -4.19238   CGGGCAAGCGCAAAA        CCGGGCGCATCC GCAAG GGCAACGCCTGG        GTCAGAAGGCTGCTG  65 347
    Ajs_1943 2035164 .. 2035179 -    -6  -3.24232   TGGTGGTCAAAGACA              CGCGCG ACTA CGAGCG               CCTGCTGCGCGAGAA  53 154
    Ajs_1941 2033512 .. 2033537 - -13.3  -5.20606   AAATATGAATAAAAA         CGCCCGTGG CGCATGAT CCACGGGCG          GTAGCAGCTACTGAA 100 50
    Ajs_1940 NONE
    Ajs_1939 2031511 .. 2031530 - -11.4  -3.78329   CTCCAGCAAGGGAAA            CACCCGCA TCCC TGCGGGCG             TGTCGCCAGTCCTTT  76 125
    Ajs_1938 NONE
    Ajs_1937 NONE
    Ajs_1936 2026736 .. 2026752 -  -7.9  -4.36596   TTCAGAAGCAACAAA              GGCCCGA TGG TAGGGCC              GTTGTGAATGCCTGA  76 54
    Ajs_1935 NONE
    Ajs_1934 2024026 .. 2024039 -  -3.7  -3.56643   GGCATACCCTGCAAA               GGTGC ATGC GCCCC                CGCCGTCTGTACGGC  53 57
    Ajs_1933 2023353 .. 2023363 -  -8.2  -4.25283   ACGCGGCGATCAAAA                 CGGC GGT GCCG                 AGGCAAACGCGCACC  79 9
    Ajs_1932 2022457 .. 2022490 - -11.9   -3.0693   TTTTAAATGAAATCA     GGCT-CTAGCGCTTAT TGG ATAAGCGCTAGCAGCT     ACAAAATGCATAGTA  68 68
    Ajs_1931 2021100 .. 2021110 -  -5.4   -3.3581   AGCATGGGGAAAAAG                 TCTC CTG GAGA                 ACCTGGTATGGAACA  50 154
    Ajs_1930 2020031 .. 2020049 -   -16  -4.39166   CGCCACACATGAAAA             CGGCTCGC AAC GCGAGCCG             TTGTCTTTTCGCGCC 100 73
    Ajs_1926 2016767 .. 2016785 -  -8.8  -4.13767   CGTTTGAGTCGAAAA             GGGGCTTC ATC GAAGCTCC             TTTTCAGTTTTCAGC  76 36
    Ajs_1924 2014152 .. 2014180 -  -5.1  -2.62263   AGTGGTGGTACAGGA        GCAGACACGGTCC ATG GTGCCTCGTCTGC        GAGAGGAAGTGGAAT  44 187
    Ajs_1920 NONE
    Ajs_1919 NONE
    Ajs_1918 2009189 .. 2009206 -  -5.5  -3.72141   AGATTCATATTGAAA             TGCGGCT AAGA AGTCGCA              TCATTATGCTGCATC  60 75
    Ajs_1917 2007839 .. 2007862 -  -4.6  -4.05446   GCGGCCAAGGACAAA          CACTCGGCG GTGGATG CGC-GAGTG          ACACGGCACGAGGGC  62 403
    Ajs_1915 2005177 .. 2005194 -  -7.7  -3.57144   CCCTGCAGGCCGAAA             GCGCCATG GGC CA-GGCGC             AGTACGACATTGTGC  62 454
    Ajs_1912 NONE
    Ajs_1911 NONE
    Ajs_1910 NONE
    Ajs_1909 NONE
    Ajs_1908 NONE
    Ajs_1907 NONE
    Ajs_1906 NONE
    Ajs_1905 NONE
    Ajs_1904 1993526 .. 1993546 -  -9.6  -2.80816   TGCCCATGTATGAGA            CGGCGCGC CTGTT GCGCGCGG            CGGGCGTGCTGGCCG  57 73
    Ajs_1897 1986691 .. 1986704 -  -3.7  -4.19238   TTTTGAAGGTCAAAA               GTGCC TCTA GGCCC                CGCTAATCAAGCGCC  63 110
    Ajs_1895 1983517 .. 1983527 -  -2.4  -3.53444   CTATGCTTTTTGAAA                 TGGC GCA GCCC                 TGTCTGTGCCCGCTG  47 77
    Ajs_1894 1982403 .. 1982427 -  -4.1  -2.91842   GGATCGAAAAAAAGG          GCGCTCAGTCT GCC AGAAAGCGCGC          GTAACGCGCCAGATC  44 5
         upp 1981527 .. 1981537 -  -2.4  -4.12188   CGATGAGCGGGAAAA                 GCGG TTG CTGC                 AGGCCATGGCCAACG  58 228
    Ajs_1891 1976905 .. 1976926 -  -9.4  -3.33815   ATGCTTGTGAAGGAA           TGCCACCG ATGCGG CGGCGGCA            GTGCCTCAGTGCAAG  63 264
    Ajs_1890 1975287 .. 1975307 -  -8.9  -3.51232   CTCTGTGCAAATGAA            CGCAAGGGG AGC CCCCGTGCA            CCAGCCGCCCCCGCT  63 70
    Ajs_1889 NONE
    Ajs_1888 1973573 .. 1973593 -  -3.8  -3.93236   CATCAATGGGAGAAA            GCGCTAGG GTGAA CCAGGCGC            AAGGCATAGAGTTGC  59 255
    Ajs_1886 1971158 .. 1971170 -  -7.7  -4.77036   CCCCATCACTAAAAA                TGGCT TCA AGCCA                CCGACTCGATTGCAT  86 300
    Ajs_1884 NONE
    Ajs_1883 1969743 .. 1969756 -  -3.1  -3.86897   GCCACGGCCGAGAAA               CTGCGC CGT GC-CAG               CCCACATTGGATGCG  56 216
    Ajs_1880 1967170 .. 1967183 -  -8.1    -3.456   CAACAGAGGAAGTAA               GCTGC TTAC GCAGC                ACTTGAGCGAGGCGG  63 61
    Ajs_1878 1962685 .. 1962697 -  -6.2  -4.34789   GAAGGCAGAAAAGAA                GGCC GAGAA GGCC                GTACCTGCGAAGGCG  71 72
    Ajs_1873 NONE
    Ajs_1872 NONE
    Ajs_1871 1955871 .. 1955894 -   -11  -2.75528   AGTGCGAAGACACGA          GCTGCCCAGA CGCG TCTGCGCAGC           GATTGCAACGGCCCA  63 94
    Ajs_1869 1954625 .. 1954642 -  -4.1  -4.07568   CCGGTCCGCTTAAAA             CCTTTGC CCGG GCAAATG              CAGATCTATGCAGCC  61 434
    Ajs_1867 1951942 .. 1951965 -    -3  -4.25104   GGGCGCCGATGAAAA          TCAATGTCGG CTTT CCGCCATCGT           CGTCACCCCGGACAA  63 268
    Ajs_1859 1945007 .. 1945020 -  -2.3  -4.07568   CCGCCGCTCGCAAAA               CAGCG ATTG CGGTG                AAAGCCGATGATATC  57 83
    Ajs_1858 1943283 .. 1943316 - -12.3  -3.31144   TGCGTATCCGCAGAA     CCGGCCGATCCGCGC GTTA GCGCGGGCCGACCAA      TTCTGGGCTCCGGTC  72 8
    Ajs_1857 1942804 .. 1942822 - -14.6  -3.05384   GTCGCGGGCATCCAA             GGGATGGC AGC GCCATCCC             GTTCCGGTTTCAACC  78 35
    Ajs_1855 NONE
    Ajs_1854 1938899 .. 1938936 -  -4.8  -3.44051   CGTGGAGCAGCACAA  CCGC-AGCCAGGAC-CGC ATTC GCTTGTCCCTGCTGGCGG   TCGACACCCACGGCT  51 219
    Ajs_1851 1935227 .. 1935248 -  -2.2  -4.56597   TCGGCCCCGTAAAAA           CTACCGTC AGCGTG GATGGCAG            ACGCACGACTCCTCG  68 10
    Ajs_1845 NONE
    Ajs_1844 1925958 .. 1925970 -  -5.5  -3.73224   TGACGTTGCAGCAAA                CCCAT CGC ACGGG                CAGCCAGAGTTGTGA  60 390
    Ajs_1842 NONE
    Ajs_1841 1922098 .. 1922115 -  -5.5  -4.63184   AATTGACCTGAAAAA             CGCCGCCG ATA CAGCG-CG             AGCAGCTATTAAATA  76 206
    Ajs_1837 1916147 .. 1916182 -    -4  -4.46432   AAAAAAGGAGTAAAA    CAACGCGGTGACGCC GGCTCAG GGCGTCAGCA-GTCG    CTGCAATAGTTCGCG  69 8
    Ajs_1829 1904629 .. 1904653 -   -10  -2.87132   CGTGTTCCGCAGACA         CGCC-CTGCCA TCGG CGGCAGTGGCG          CTCAAGCAGGGGGCC  59 195
    Ajs_1827 1901689 .. 1901741 -   -22  -3.15544   CTTGAGCGCCAGCAA GCCGAGGCGGCCGGCCGCAAT-CCG CCGA CGGCATTGCCGCCGCCGGCCCCGGC CGCGAGCAGCGACCG 100 104
    Ajs_1821 1892549 .. 1892569 -  -8.2  -3.65902   GGTACTCCACGCAAA            CGCGCAGC ACGCA GCTGCCCG            AGGTGCCCACGCTGG  65 366
    Ajs_1817 NONE
    Ajs_1816 1887986 .. 1888020 -  -4.4  -5.37043   AGTTCAGATAAAAAA    GGCCTGC-AGCGCTTA TGCAG TAAGCGCTAGCAG-CT    ATTGAATCGATAGTG  88 47
    Ajs_1809 1878611 .. 1878633 - -17.8  -3.72073   AGTGACCAAAACGAA           CAACGGGCCT TGC AGGCCCGTTG           GTTCTTCAAGCAAGG 100 80
    Ajs_1807 1876883 .. 1876912 -   -10   -4.8622   CCCTCCAAGGAAAAA       GCGCAG-GTGGTC TTTGG GGCCACGCTGCGC       GGCTTTCGTGAGGCT 100 225
    Ajs_1805 1875489 .. 1875505 -  -2.3  -3.47078   GATGCTACAGGAGAA              TTTTTCA CCA TGAGAAA              TTGCATTAATTCGCA  47 321
    Ajs_1798 1866530 .. 1866572 - -12.7  -3.29511   CGCAGTGGGCTACAA CGGCAA-CGCCCCCGCCACA GTGA TGCGACGGGGGCGACTGCAA AGAGGCGCTGCTTTG  74 335
    Ajs_1797 NONE
    Ajs_1796 1863779 .. 1863799 -  -9.1  -4.13767   GGGCGCACTTTAAAA            GTCTGTCTT ATA AAGACAAAC            TATTTTTTAATGCTT  79 79
    Ajs_1795 NONE
    Ajs_1794 NONE
    Ajs_1793 1860810 .. 1860847 -  -4.8  -2.78798   ATGTTCCAGTCAAAT   CTGGCT-CCAGCGCTTG TGGGG CAAGCGCAGGCAGCTAT   CGTTTTTAGTGGGCC  44 31
    Ajs_1792 NONE
    Ajs_1791 1858439 .. 1858455 -  -5.7  -3.07113   CAGCAGGCCAGCCAA              CCATGCC TGA GGCGCGG              AAACCTTAACGTTGA  49 41
    Ajs_1790 NONE
    Ajs_1789 1856910 .. 1856935 - -13.2  -3.01712   GCTCCTGCTTCAATA         GCGCCCGGCG CATTGC CGCAGGGCGC          GCCGCGCCGTCGCCG  71 45
    Ajs_1788 1855796 .. 1855844 -  -5.1  -3.73224   CCATTGCCGACGAAA GCGCGCTGGACGCGGCCGCCACC GACTT GCTGGCG-CTGGGCGC-GCGCGC GGTGCTGCTCAAGGG  57 400
    Ajs_1786 NONE
    Ajs_1785 NONE
        thiG NONE
    Ajs_1783 1851893 .. 1851907 -  -4.2  -4.18506   GCAGTCGCAAAAGAA               CCGCTT CTG AAGCGC               GAACGCCCCCCGTGC  63 51
    Ajs_1781 NONE
    Ajs_1780 1847400 .. 1847432 - -18.5  -3.59946   GTTTGAATGAGACAA      GCCGCTGGCGCTTGA CCG TCAAGCGCTAGCAGC      TATAAAAATAGTAGC 100 42
    Ajs_1779 NONE
    Ajs_1778 NONE
    Ajs_1777 1843935 .. 1843975 -  -8.2  -4.84359   GCAGGTTGATAAAAA CTTGCGGCCTAGCC-ACCC CAAT GGGTAGGCCAGGCCGGGAC  CGGATCTTCAACTGC  90 61
    Ajs_1776 1842651 .. 1842666 -  -5.4   -3.9644   CCTGCAATACAACAA              CACCAA CCGG CTGGTG               AAGAGCCCTTCGTGG  63 322
    Ajs_1768 NONE
    Ajs_1767 NONE
    Ajs_1766 NONE
    Ajs_1765 NONE
    Ajs_1764 NONE
    Ajs_1763 1829507 .. 1829524 -  -2.7   -3.6502   GAGTTCCCATGCAAA             TGATCAC CGCC GTCATCA              AGCCCTTCAAACTGG  53 390
    Ajs_1760 1825808 .. 1825834 -    -5  -3.21099   CGCTCCTACGAGCAA         CCCACCCGCATG GCG CACGCGCCTGAG         TTCATCAAGGGCGTG  47 433
        hppA NONE
    Ajs_1756 1821017 .. 1821039 -  -5.5  -2.52896   TCAGCGGGCAAGCGA          GCACTGGCGG GGCA CCGC-AGGGC           ACGCGGCTCGCAGGG  45 42
    Ajs_1755 1820199 .. 1820220 -  -3.7  -3.35996   TACCCTCACTGAGAA           GTACAT-CCG TCG CGGCACGCAC           AGATCAACAAGACAG  49 225
    Ajs_1753 1817973 .. 1817987 -  -2.8  -3.44146   GTCTCCTATAAGGAA               GCTGAT TCG ACCAAC               ACCGGTCAAAATAGT  49 193
    Ajs_1752 1816819 .. 1816872 -  -4.2  -3.64984   ACACCGGTCAAAATA GTTCTATCTATTTTTGAGACACCACA CTAG TGTGGTGTCTCAAAAGTA-ATC-ATC AAATAATGGTACTCG  53 24
    Ajs_1751 1815215 .. 1815227 -  -3.3  -4.07568   GCGCGGCCTGGAAAA                CGTGG CCA CCACC                AGCGAGCGCCTGCTG  59 487
        moaA 1813142 .. 1813168 -   -15  -2.71263   AAGGGTGGTGAACGA         CGCGCCGGGGCG GGT CCCCGCGGCGCG         GCGGCGGCTCAGCCG  75 34
        mobA NONE
    Ajs_1747 1811008 .. 1811018 -  -2.4  -3.53091   ATGGGTGGCGGCAAA                 CGGC ATG GCGG                 CTCCTGCAAGGATGG  47 103
    Ajs_1746 1810465 .. 1810492 -    -9  -5.06414   CGGCTGGAAGAAAAA        GGGCTGGCGCAC GGCG GCCGGCCAGCCC         GTGAAGAACGTGGAG  95 211
    Ajs_1743 NONE
    Ajs_1742 1806772 .. 1806790 -  -2.2  -4.59511   AAGAGGGGGCAAAAA             TGCAGGCC CCC GGCCCTCT             GCGGCAGATTACGGC  68 335
    Ajs_1739 1803265 .. 1803282 -  -5.5  -3.53091   ATGGGTTTCTCCAAA             CACCACC GAAT GGCGATG              CATGGAGCCCCATTC  55 463
    Ajs_1737 1802955 .. 1802972 -  -8.4  -2.53263   GCCAGTGGGAAGGCA             TGGCGC ACCACA GCGCCA              GCAGCAGGCGATTGA  53 53
    Ajs_1736 1801753 .. 1801781 -  -3.6  -4.19238   CGGGCAAGCGCAAAA        CCGGGCGCATCC GCAAG GGCAACGCCTGG        GTCAGAAGGCTGCTG  65 342
    Ajs_1733 NONE
    Ajs_1732 NONE
    Ajs_1731 NONE
    Ajs_1730 NONE
    Ajs_1729 NONE
    Ajs_1728 NONE
    Ajs_1727 1795971 .. 1795986 -  -7.5   -5.4505   TCCGGCAAGAAAAAA              GCCCC TCGGCG GGGGC               TCTTTAGGGACTGAC 100 144
    Ajs_1722 1789837 .. 1789881 -  -9.2  -3.84514   ATGCCAAGGACGAAA GCGC-GCTGA-TGATGGCCGCG TTG CGCGGCAATCTGCCCGCTGCGC GCGGCCTGATCGCGC  71 499
    Ajs_1715 1784317 .. 1784356 -    -4  -3.28712   CGCCGTCGCCTACAA  CCGCCTGGGTCTGCCCGT GGCG ACGGGCCGACTGCTGCAG   GATGCGCCGGGCGAG  47 334
    Ajs_1711 NONE
    Ajs_1710 1778596 .. 1778617 -  -7.9  -2.78384   GCGCCGTGCACGACA           TCGCCG-GCG CAC CGCGCGGCGC           CTACTGGGACGGGGG  51 492
    Ajs_1706 NONE
    Ajs_1705 1772612 .. 1772627 -  -3.9  -2.80816   CCTGCATGGATCACA              GGCCC TCGAAC AGGCC               GCCCGCGTTGAGCAG  42 5
    Ajs_1704 1771481 .. 1771495 -  -2.1  -3.48115   TCGTCAGAAAAGATA              GC-TGC CAGC GCATGC               CAGATAAGCGTTAGA  47 36
    Ajs_1701 1767694 .. 1767718 -  -4.3  -3.85698   CCGTTCGCGGACAAA         CCCG-AGCTG GGGGCG CAACTGCGGG          CGGCGTTGCGCGCGC  58 156
    Ajs_1693 NONE
    Ajs_1692 1759092 .. 1759117 -  -2.5  -3.17075   CGCGCTGCAAGCCAA         GGGCCT-GCG GGGTGTG CGCGAGGGCC         GCCATTGTCGCCCAA  43 85
    Ajs_1691 1758107 .. 1758117 -  -8.2   -4.7373   TGATTTGATCAAAAA                 CGCC AAT GGCG                 CACGCGCGGGCTATC  88 69
    Ajs_1690 NONE
    Ajs_1689 1755422 .. 1755441 -  -6.3  -4.09739   CGAATGGCGTGAAAA            CCGCGCC AATCTA GGCGCGT             GACGACGCCAAGGCC  67 228
    Ajs_1677 NONE
    Ajs_1676 NONE
    Ajs_1675 NONE
    Ajs_1674 1737810 .. 1737831 -  -6.5  -2.61695   CTGATTGGGAAATAG           GCTGCAGAC GACT GGCTGCAAC            GCCCTTGGATCGGGG  48 46
    Ajs_1673 1736954 .. 1736971 - -14.1    -5.252   GACGGGCATAAAAAA             CGCGGCC CGAA GGCCGCG              TTGTAGTGCGCGAGG 100 53
         psd 1732187 .. 1732203 -  -9.3  -2.63715   AGGGAGGCTACATCA              CGCGCCG TTA CGGCGAG              CCTGCGCGCAACATC  54 502
    Ajs_1665 1730946 .. 1730963 -  -5.5  -3.28712   TTCGCGTTCGCAGAA             CGCGTCCC GGC GGG-CGCA             ACCTTTTAGACGCGC  52 31
    Ajs_1664 1730240 .. 1730262 -  -9.8  -2.57132   GTCGTTCCGGAGAAG           GACGCTACGG ATG CCGGAGCATC           AACTCGTCCGGGTGC  59 24
    Ajs_1661 1722024 .. 1722051 -  -5.4  -2.63102   ATCAGTGCCAGAGTA        GGCTCTTCAGAG GCCG CTCAGCAGGGCC         ACCTTCTCGCCAGTG  43 4
        glyA NONE
        nrdR 1720020 .. 1720055 -    -6  -4.59773   GGTGATGGTCAAAAA    CGGCT-GTAGCGCCCGC CCA GTGGGCGCTGCCAGCTA    TCAATAGAAGAGCAA  76 56
    Ajs_1656 NONE
    Ajs_1655 1715978 .. 1715996 -  -5.2  -3.73224   TCACGTGGCAGTAAA             TGGTCGCC GCG GGCAAGCA             GGGGCCAGTGTTTCG  58 156
    Ajs_1654 1712880 .. 1712891 -  -7.2  -2.87132   GCCGTGCTGCACATA                GGCG ACGA CGCC                 ACGCTGGATGCGCAT  50 176
    Ajs_1652 1711114 .. 1711161 - -32.8  -3.05384   CCGGGCCGCATCGAA CGCGCGCTGCTGGCCGATCCAC GGCA GGGGCTCGGCCAGCAGCGCGCG CGTGTCGTCAAAGCC 100 103
    Ajs_1650 1707619 .. 1707659 -  -8.9  -5.14477   CAGAGATTCAAAAAA  GTGAGCTGCTAGCGCTTGC CTG GCAAGCGCTAGAGGCCGAT  TTGGCTATGAAGCTG  93 67
    Ajs_1649 1706502 .. 1706515 -  -5.2  -3.28712   TCCTCGTGTTCAGAA               GCCG AAATGG CGGC                GGATGCGCAGGCCGA  50 6
    Ajs_1648 1706261 .. 1706284 - -16.8  -3.33696   CGCCGCGCCAAGCAA          CAAGGCCTCC GTGT GGAGGCCTTG           TTGCGTTGTGCGCGG  88 50
    Ajs_1641 1699523 .. 1699554 -   -10  -3.53012   TGGCGGTGGCGCAAA      CCATGCCAGC-GCGC GCC GCGCAGCGGGCCCGG      CCGGGCCTGCGGCAT  68 85
    Ajs_1640 NONE
    Ajs_1639 1697186 .. 1697197 -  -3.6  -3.49048   GGGCAACGAACAACA                GGCC TTCG AGCC                 CCTGCGGCAGATTCA  51 400
    Ajs_1636 NONE
    Ajs_1635 1693866 .. 1693876 -  -2.4  -3.53091   ATGGTTTTTGTCAAA                 CGCG TTC CTCG                 ATGGGCACGAACTTC  47 10
        acnA NONE
    Ajs_1633 1689564 .. 1689582 - -14.6  -3.51976   AAGGCGCCAAACGAA             GCTGGGGT GCT ACCCCAGC             GAGGCTTGGCAACGC  83 309
    Ajs_1632 NONE
    Ajs_1630 1685031 .. 1685057 -   -18  -2.87564   TGAGGGCGTTATAGA         GCATGGCGGCGC ATT GTGCCGCCATGC         CGGTCGATGCGGGCC  90 79
    Ajs_1629 1684520 .. 1684536 - -10.8  -5.63517   CCGCCAAACAAAAAA              CGCGCC TTCAT GGCGCG              TTTTTTTATGCCGGC 100 65
    Ajs_1622 1675952 .. 1675968 -  -2.2  -3.53224   TATTTCTTCTGGAAA              TCATGG TTGCT CCTTGA              TCGAAAGGGATAGGG  47 94
    Ajs_1621 NONE
    Ajs_1620 NONE
    Ajs_1619 NONE
    Ajs_1618 1672935 .. 1672974 -  -8.4  -2.75382   TACTGGAGGGAACGA  GCGGCCCGGTCATTG-CCG CCA CGGACTATGTGCGGGCCGT  GCCCGAATCGGTGCG  52 220
    Ajs_1616 1669834 .. 1669888 -   -15  -2.89564   TGGCCACTGGAGACA TGGC-GGCGGGCAACGTCG-C-GCGCC TACC GGCGCAGGCGACGCCGCCTGCCAGCCG CTGACCGCTACGGCG  77 33
    Ajs_1608 1662874 .. 1662891 - -12.7  -5.72207   TTGAAACGAAAAAAA             TGCCCGC GGAC GCGGGCA              TTTGCTTGTCGAGCA 100 49
    Ajs_1607 1661638 .. 1661665 - -17.8  -4.38712   GGCACTCCTAGAAAA        GCAACAGCCCGGC AGG GCCGGGCTGT-GC        GCAAGGGGCAGAGGG 100 42
    Ajs_1606 1660790 .. 1660800 -  -8.2  -3.69364   ACCCAATACAGACAA                 GCGC AAG GCGC                 TATCAAAAAATCACT  69 36
    Ajs_1599 1653187 .. 1653203 -  -4.3  -4.16943   CGCCAGATTGCAAAA              GGAGCGG GAT CAACTCC              GCGAAGGCGAGAAGG  66 302
    Ajs_1589 1644802 .. 1644818 -  -2.1  -3.34398   GGTGGCCGCGAAAGA              CGTACAG CCC CAGTTCG              CTAGCGTGGCACACG  44 473
    Ajs_1581 1637799 .. 1637822 -   -16  -3.14132   GGTTGGTCGGATCAA          GCGCGGATGC GGTA GCACCCGCGC           AAATCCTTGGCTTCA  86 38
    Ajs_1580 1636929 .. 1636962 - -15.3  -4.99043   CTTCGAGAAAGAAAA     GGAGCCATGGCACCC GATG GGACGACATGGCTCC      ATCGGGTGGATGGAA 100 121
    Ajs_1579 1636266 .. 1636304 - -14.4  -2.70525   TTCTCCGAAAGGAAG   CGGGGAACGCACCGACCC ATG GGGGAGGCGAGCTCCCCG   GATGGGATGGACGAA  75 320
    Ajs_1578 1631202 .. 1631229 -   -17   -5.7946   GGCGCAAGAAAAAAA        CGCCCCGCCACC TTTC GGTGACAGGGCG         TGAACTCAGGCCGCT 100 31
    Ajs_1577 1629400 .. 1629424 - -12.2  -3.37344   CCGGCATGGAATGAA         GGCCCTGTGCC TTGC GGCA-AGGGCC          CTGGCTCAATGGCGC  72 443
    Ajs_1576 1628765 .. 1628819 - -20.1  -3.17075   GGGGCGCGAACGCAA GACGATC-TCGACCAG-GCGCTGGCCC AAT GGGCCGGCACGCTGGCCGAGGAACGTC CGGAACTGCTGGAGA 100 79
    Ajs_1574 1627988 .. 1628026 - -17.4  -3.53091   ATGGGGTGTTGGAAA   CACCGAGTCCCCCCGGCC ATG GGCCAGGAGAACTTGGCG   CCAGGCTCAGCCGTT  93 32
    Ajs_1572 1626637 .. 1626681 -  -2.9  -3.73953   AGCATCGCTATGAAA CGCTGTTCTCGGA-CGAGGCCG ATGG CGCGCTCGATCCG-GAAC-GCA AGCGCATGTTCGGAG  53 235
    Ajs_1570 NONE
    Ajs_1569 NONE
    Ajs_1568 1620149 .. 1620163 -  -3.5  -3.14125   GCCACACATGGAAGA               CAAGC TGCGC GCCTG               GGCGAAGGTGGCCGA  45 286
    Ajs_1565 1616482 .. 1616505 -  -2.3  -3.05596   CATCCGGGGACGGAA          CGGCTGTGA TCCCGT TCATGGCCG           CTACACCAGGTCGGT  41 26
    Ajs_1564 NONE
    Ajs_1563 NONE
    Ajs_1560 NONE
    Ajs_1559 NONE
    Ajs_1558 1610538 .. 1610574 - -15.2  -2.72511   GTGATCTCCTGAAAG   GCCAGC-GCCT-GCCCGC ACA GCGGGCGAGCCCGCTGGC   GGGGTGAAAGAAATC  78 39
    Ajs_1557 NONE
    Ajs_1556 1607856 .. 1607887 - -12.2  -4.18762   AACCTGCACTGAAAA      GGCCCGGGAGTGGG CGAC CCCACCCCCGAAGC       AAACATCACGCGGCG  91 31
    Ajs_1554 1606488 .. 1606518 - -16.9  -3.53444   GCAGGTGCGTGGAAA      CG-GGCGGAAGGGG GTAT CCCCTCCCGCCACG       GTTCGTCTATGCGTT  93 52
    Ajs_1552 NONE
    Ajs_1551 1604436 .. 1604469 - -11.2  -3.07816   CCGGGAGCCATCGAA     GAATCTCCAT-GCCC GCGCG GGGCCATGAAGATTC     ATTGTTCAGGAAGGG  66 41
    Ajs_1550 NONE
    Ajs_1549 1600722 .. 1600746 -  -5.5  -2.86728   ACGAGGGAGATGACA          GCGACGGCCCG GAT CATGCGGCCGC          TCCCCGTGGCTGTGC  48 14
    Ajs_1548 1599838 .. 1599854 - -10.1  -2.79183   GTGATTGGCATCATA              TCCCCAC CAT GCGGGGA              TGCCCATTACCTCGC  57 286
    Ajs_1546 1599208 .. 1599225 -  -9.1  -3.06796   CTGGAGTTCATTGAA             CACGCGC GTCA GCGCATG              GACAGAGAATAGGAG  60 178
    Ajs_1545 1598563 .. 1598580 -  -9.8  -3.28712   GGTGGTTCTGGACAA             GCCCGC TGCAGT GCGGGC              ACGGGGTGAGGGCCG  66 122
    Ajs_1544 NONE
    Ajs_1543 1597498 .. 1597512 -  -2.1  -3.21218   AGTGCTCATGACGAA               TCTCC GGAAA GGAAA               AGACGGGTGTCGATC  43 102
    Ajs_1542 NONE
    Ajs_1541 NONE
    Ajs_1540 NONE
    Ajs_1539 NONE
    Ajs_1538 NONE
    Ajs_1537 NONE
    Ajs_1536 1592325 .. 1592335 -  -2.4  -4.25283   ATCGGTGGAGGAAAA                 CGGC ATG GCGG                 CCTCACTGCTGTCGA  62 28
    Ajs_1535 NONE
    Ajs_1534 NONE
    Ajs_1533 NONE
    Ajs_1532 NONE
    Ajs_1531 NONE
    Ajs_1530 NONE
    Ajs_1529 NONE
    Ajs_1528 NONE
    Ajs_1527 NONE
    Ajs_1526 NONE
    Ajs_1525 NONE
    Ajs_1524 1577932 .. 1577954 -  -2.5  -3.77206   GAGAATGCCATCAAA           CGAAGTCCG TACGC CGGCCACCG           ACTGCCCGCGTAGGC  52 144
    Ajs_1523 1575097 .. 1575112 - -11.8  -3.16683   ACTTGAGCGCATCAA              GGCCCG CATA CGGGCC               AAGGTGGAACACCCG  70 464
    Ajs_1519 1572767 .. 1572790 -   -11  -2.75528   AGTGCGAAGACACGA          GCTGCCCAGA CGCG TCTGCGCAGC           GATTGCAACGGCCCA  63 94
    Ajs_1514 NONE
    Ajs_1513 NONE
    Ajs_1512 NONE
    Ajs_1511 1565554 .. 1565564 -  -3.2  -2.78384   CTGTCGTGGAGTAGA                 GTCA CTT CGAC                 CCCCCCCCGGCGCCT  40 16
    Ajs_1510 NONE
    Ajs_1509 1564188 .. 1564201 -  -3.8  -2.62616   GTAGGTTTCACAGCA               CGAC CGGGTT GTCG                GGCAGTTCGTTGTGG  41 4
    Ajs_1508 NONE
    Ajs_1507 NONE
    Ajs_1506 NONE
    Ajs_1505 NONE
    Ajs_1504 1558310 .. 1558329 -  -9.2   -2.9186   ATTGAAGCCGACATA            CTCGCCCG AGGT CGCGCGAG             CGTACGCGTAGACAC  58 298
    Ajs_1500 1556273 .. 1556296 -  -6.6  -3.05384   CTTGCCCGTAGCGAA          GCGCGCGTCA ACGG TGAGGCGCGT           GCGTGTCCGCGTCGG  51 64
    Ajs_1499 1554116 .. 1554132 -  -2.1  -2.78384   TCGTGTTGCACGACA              CCACACG GGT CGAGTTG              CGGCCGATGGCCGAT  39 441
    Ajs_1485 1541493 .. 1541514 -  -5.7  -3.68619   GCCAAGGCAGCTAAA           GCCGGCCGT GGCG ACTGCCCGC            CCCAGCCCTTGATCC  60 238
    Ajs_1474 NONE
    Ajs_1473 1530988 .. 1531011 -  -4.6  -4.73635   GAGAACCCAACAAAA          GGTGGCGTTGT TAG ACAA-GCCAGC          ACCGTAAGTCCTCTT  78 214
    Ajs_1461 NONE
    Ajs_1460 NONE
    Ajs_1459 1518647 .. 1518671 - -12.7  -2.67513   ACATCGACAATCAAC          TGGCGGCGCCG TAA CGGCGCCGCTT          CAAACCCAGGAGTAA  67 207
    Ajs_1456 1517120 .. 1517143 - -12.4   -4.7629   GCACCAACTCAAAAA          CCGTTCCTGC GAAA GCGGGAACGG           GTTTTTAGCTGGATG 100 30
    Ajs_1455 1514906 .. 1514924 -  -5.3  -3.67954   GAAAGACATTGCAAA             TGCAATC TCCGC GACTGCA             CATACAAGCTGGCAA  55 44
    Ajs_1454 1514608 .. 1514620 -  -6.2  -3.28791   AGGTCCGCGGGAGAA                CGGG TCAGG CCCG                GTTGTTGACGCGCTC  52 17
    Ajs_1453 NONE
    Ajs_1452 NONE
    Ajs_1451 NONE
    Ajs_1450 NONE
    Ajs_1449 1509645 .. 1509663 -  -4.4  -3.93262   GTCAACAAACCGAAA             TGAGCCGG CCC CCGGTTCT             GTGCGCGCTGGCGGC  58 362
    Ajs_1448 NONE
    Ajs_1447 1508205 .. 1508226 -  -4.3  -3.34398   TTGGTGGTTGAAATA           CCCG-TGCCA TGT CGGCGTCGGG           CGCGTGCTGGGGTGC  48 50
    Ajs_1446 1507686 .. 1507718 -   -14  -2.78596   TAGCTCGCGAGGACA      TGGGGGGCGGCAAC GTACT GCGGCCGCCCCCCC      GTCGGATCACTTCCT  72 32
    Ajs_1445 1504977 .. 1505006 - -13.5  -3.96624   GATTGGCAGGAGAAA       GGCGCCGAAGGCC TTGC GGCCTTCGGCTCG        GGAGGACGGAACCAC  90 455
    Ajs_1444 1503260 .. 1503289 -  -7.7   -2.9627   GCAATGCAGGAGAGA       GGATCACGCGGCC CGCC GGCCGCGTCGTGC        ATCAATCCGAAGCGC  53 27
    Ajs_1443 1502443 .. 1502463 -   -14   -5.0065   CAGGGACAAAGAAAA            GCCCCGCA ACGAG TGCGGGGC            GGTCATGACGGTGCG 100 52
    Ajs_1441 1501498 .. 1501531 - -11.7   -4.4078   GGGGGGGAACGAAAA     GCAGT-GGTGTGCCAG GGA CCGGCTCACCAACCGC     TGTAGTTCAGCAGCA 100 15
    Ajs_1440 1500632 .. 1500665 -  -8.1  -3.70773   CTCCAGATTGAATAA     TGGAGCCAATTCCCG CCAC CGGAAATTGGACCCG      GTGGGTTGAAAATGG  69 49
    Ajs_1439 1499798 .. 1499829 -   -18  -2.77781   TCCTATGAAAATGGA      CCAGCCCGGCTCCT GGCG AGGAGTCGGGCCGG       CTTGGGGGAGACAAA  86 68
    Ajs_1438 1499472 .. 1499487 - -10.4  -5.06414   TGCGGGCAAGAAAAA              GCCCCT CGAA AGGGGC               TGGTCGGGTCAGGCT 100 34
    Ajs_1437 NONE
    Ajs_1436 1498125 .. 1498152 - -17.8  -5.06414   TCTCCTGAAGAAAAA        GGCCTTCCACCC GAAT GGATGGAAGGCC         TGTGGGACAAGTCGC 100 56
    Ajs_1435 1497706 .. 1497722 - -13.7  -4.64861   TCCGCCCAAAAGAAA              GCCCCCA AAC TGGGGGC              TTCAAGGGGGACGGG 100 53
    Ajs_1434 1496439 .. 1496462 -    -8  -5.27779   GGGAATAGGAAAAAA          GCAAGGCCCC GTGA GGGGCCATGT           CGGATCAGAACGAAG 100 30
    Ajs_1433 1496195 .. 1496209 -  -7.1  -3.16421   GGAACAATTACTTAA               GCGAC TTCAC GTCGC               ACGCGGATCACGAAC  53 7
    Ajs_1431 1494577 .. 1494600 -   -11  -2.75528   AGTGCGAAGACACGA          GCTGCCCAGA CGCG TCTGCGCAGC           GATTGCAACGGCCCA  63 94
    Ajs_1430 1493587 .. 1493601 -    -7  -3.53012   GCCTGGCGCCTCAAA               GAGGCG CTG CGCCGC               ATCTACGAGATGGCA  58 305
    Ajs_1426 1490152 .. 1490164 -  -4.7  -3.61398   CCCCGTGGGGAAGAA                CCCCC AGT GGGTG                ATGGAATGCCGCAGG  55 70
    Ajs_1425 NONE
    Ajs_1424 1488918 .. 1488930 -  -4.8  -3.63991   GATCACGCCCAAGAA                GCTG CACGC CAGC                ATCGAGGCCATCGAG  55 513
    Ajs_1421 1487477 .. 1487502 - -16.9  -2.77899   GGCGGGGATGAATGA         CGGAAGCACGC CAAG GCGTGCCTCCG          AGGGTGGGTCAAGCC  84 34
    Ajs_1420 1486315 .. 1486330 -  -6.1  -2.62616   CGAGGTGGTACAGCA              GGACG GCAGCG CGTCC               GGTGGATCAGCGGAT  46 32
    Ajs_1419 1485893 .. 1485904 -  -5.8  -3.53012   GGCTCCTCCTTGAAA                GGCT ATTG AGCC                 ACGACACCCCTGGCG  55 87
    Ajs_1418 1485455 .. 1485495 - -10.4  -5.27335   TGCTCCAAAGAAAAA TGGGGCATG-CACCACCCC CAGC GGGGCAATGGCACGCCCCG  TGATGGGAAGTACAT 100 101
    Ajs_1417 1483066 .. 1483104 - -17.4  -3.51934   TCCTTGGGATAAAGA   GCGCAGCCACGTACACGG AGA CCGTGAACGTGGCTGCTA   GGTGGGAACAACGGA  93 76
    Ajs_1416 1482314 .. 1482331 - -12.7  -5.40072   CGCGTGTCAAAAAAA             CAGGCCC CGAA GGGCCTG              TGAAAACGCACATCG 100 51
    Ajs_1415 1479840 .. 1479855 -    -6  -3.06315   TCAACACCCTTAATA              GCGCGC ATCA GCGGGC               TTCTTATCGTTGGGC  49 4
    Ajs_1414 1478608 .. 1478632 -  -2.7  -3.59252   CGGCAGCAAACAATA          CGATCTGCGGA TTA TCCGATTATCG          GCATGCCGTTAGTGA  49 122
    Ajs_1413 NONE
    Ajs_1412 1477326 .. 1477339 -  -3.7  -3.09516   GCTCCGATCAGGGAA               TCGCC ACGC GGCGG                ATTTGGGCGCCGGCC  45 4
    Ajs_1411 NONE
    Ajs_1410 NONE
    Ajs_1409 NONE
    Ajs_1408 NONE
    Ajs_1407 1472421 .. 1472454 -  -3.8  -3.09505   AGATCGGAGCCAACA     TCGCGCCATTCCTG TGTGAT CAGCAATGGCTTGA      TCGTGGGCAGCGAGG  45 91
    Ajs_1406 NONE
    Ajs_1405 NONE
    Ajs_1404 1471425 .. 1471448 -  -7.4  -2.87132   TGCTGCTCGGACATA          CCGGCCTCGCT TAC AG-GATGCCGG          TAGCTTCGGTGAGCA  53 12
    Ajs_1403 NONE
    Ajs_1402 NONE
    Ajs_1401 NONE
    Ajs_1400 NONE
    Ajs_1399 NONE
    Ajs_1398 NONE
    Ajs_1397 1463820 .. 1463831 -  -4.4  -4.51174   GGATGAGAATGAAAA                GATG CATC CATC                 ACCGCGATTGCAGTG  69 118
    Ajs_1396 1463205 .. 1463224 -   -15   -5.1356   CGCCACGAAGAAAAA            GCGGAGGC CGAA GCCTCCGC             GCTGATCAACGAAGC 100 51
    Ajs_1395 1462632 .. 1462654 -  -4.6  -3.14468   GCGCAGCAGATCGAA           TGGGCGCGTC ATG GCTGCGCCCT           CCGGTGCTGCTTGAT  48 11
    Ajs_1394 1461706 .. 1461718 -  -5.5  -3.60627   CCACCTCAGTTGAAA                TCGAC GCT GCCGA                GGAAGACCTGGCCCT  57 3
    Ajs_1393 NONE
    Ajs_1392 NONE
    Ajs_1391 1458050 .. 1458081 -  -3.6  -3.34222   ATCAGCACCGCAGAA      CGCC-TCGGCCGC GCATTTG GCCGCGGATGGCG      TGCGTATGCGCGAGG  47 327
    Ajs_1387 1454105 .. 1454133 -  -3.1  -3.77491   AAGCGACAACAAAGA        GGTCAACCC TGCGCTTGATC GGGTTGCCC        GCTTCGTGAATTTGC  56 404
    Ajs_1384 1451746 .. 1451782 -  -3.7  -3.29252   GGTGATGAAACAAAC   GCAGGTAGGGGCAAGC GCCAAT GCTTACCCGT-CGTGC    CTCAATTGCGGCCAG  48 27
    Ajs_1383 1451391 .. 1451419 -   -16  -5.00616   TTCTTTGTCAAAAAA        TGCCGGGTGGGC GGTGG GCACACCCGGCA        ACGATGAGCATCACG 100 36
    Ajs_1382 1450973 .. 1451006 - -13.2  -3.96148   CTGTCGCAGCAGAAA     CG-CGAATTGGCCCG GATCG CGGGCCAACCCGTCG     TTGCCTGCATGGCTT  83 39
    Ajs_1377 1445607 .. 1445620 -  -4.5  -2.52464   TCCTCTGTCAATGCA               GGACGG ACG CCG-CC               GTGTTGGGGGCGCAC  41 4
    Ajs_1376 1444391 .. 1444401 -  -2.4  -3.37685   AAAATCGTTGAAATA                 GGCC AAG GGCG                 TCAGGGCAAGGCCGA  45 26
    Ajs_1375 NONE
    Ajs_1374 1441720 .. 1441738 -  -6.7   -3.9461   CCTTTGGAACAACAA            GTCGC-GC CAGA GCAGCGAC             GTCAAGCGCCTGGCC  66 342
    Ajs_1371 1438319 .. 1438340 -  -8.1   -4.0865   TGCAAGAAAATATAA           CACATGAAC ATAT GTTCATATG            AACTATATGAATCAA  73 149
    Ajs_1370 1436952 .. 1436978 -  -3.7  -3.02144   GCATCGGGGCGAACA        TGTTCGCTCCCC ATCC GACG-GCGAACA         TCGCAACGGCGGGAC  45 321
    Ajs_1369 1435834 .. 1435847 -  -3.1  -3.28712   GTCGCTGGTCCAGAA               GTGACC TGC GG-CAC               GATATGCAATGGTTT  46 45
    Ajs_1368 NONE
    Ajs_1367 1434306 .. 1434320 -  -3.4  -3.81488   CGTGGTGAAAGAGAA               CTGGCC AAA AGCCGG               ATGCTGGGCTGGTCC  54 91
    Ajs_1366 NONE
    Ajs_1365 NONE
    Ajs_1364 NONE
    Ajs_1362 NONE
    Ajs_1361 NONE
    Ajs_1360 1428758 .. 1428798 -   -11  -3.17075   GCTGGGGCAATGGAA  CGCCGACGAAGGCAAGCG CCTGT CGCTGACCGTCAACGGCG  AAAGCATCGGAACTC  64 478
    Ajs_1357 NONE
    Ajs_1356 NONE
        dsbG 1423561 .. 1423580 -  -2.8  -2.90496   TCGCGCGCCAAAGGA            TGGGTCTCA GCG TG-GTCCCA            GCACCTCGGCCAACT  42 12
    Ajs_1354 NONE
    Ajs_1353 NONE
    Ajs_1352 NONE
    Ajs_1351 NONE
    Ajs_1350 1419095 .. 1419109 -  -5.8  -3.68827   TACCCATGAGTTAAA               TTTAAC GTG GTTAAA               TTCTAGTGACTGCCT  60 354
    Ajs_1344 1413051 .. 1413075 -  -3.4  -3.62046   CGAGTCGCCGAACAA          CCTGCCGGTC CCGCT GTTCGGCAAG          CTGGCTGGGAAGTCC  51 468
    Ajs_1342 NONE
    Ajs_1341 1410103 .. 1410119 -  -5.8  -3.28924   CAGCTCGGCCTACAA              CCACGC CAAGT ACGTGG              AGCCGCGCCGCCGGA  51 304
    Ajs_1335 NONE
    Ajs_1334 NONE
    Ajs_1333 1401267 .. 1401290 - -10.3  -2.69932   AGAAGGAGAAGGAAC          CCGCCTCGCC GATCA GGCGAGG-GG          CAGCCACTGAGGGCG  60 14
    Ajs_1332 NONE
    Ajs_1331 NONE
    Ajs_1330 NONE
    Ajs_1329 1394929 .. 1394943 -  -5.6  -3.36273   GGGGGTGAACAGGAA               GCCGCT CAA AGCGCC               TCGGCGTCCTTGTCG  52 16
    Ajs_1328 NONE
    Ajs_1327 NONE
    Ajs_1326 1393583 .. 1393594 -  -7.2  -3.07816   GGCGGAGTCACTCAA                GCCG GGGT CGGC                 CGCGCGCAGACCGGC  54 75
    Ajs_1321 1387894 .. 1387912 -  -7.5  -3.67954   GAAAGACATTGCAAA             TGCAATC TCCGC GATTGCA             CATACAAGCTGGATA  62 44
    Ajs_1320 NONE
    Ajs_1319 NONE
    Ajs_1318 NONE
    Ajs_1317 NONE
    Ajs_1316 NONE
    Ajs_1315 1382589 .. 1382607 -  -4.4  -3.93262   GTCAACAAACCGAAA             TGAGCCGG CCC CCGGTTCT             GTGCGCGCTGGCGGC  58 362
    Ajs_1314 NONE
    Ajs_1313 1381149 .. 1381170 -  -4.3  -3.34398   TTGGTGGTTGAAATA           CCCG-TGCCA TGT CGGCGTCGGG           CGCGTGCTGGGGTGC  48 50
    Ajs_1312 1380630 .. 1380662 -   -14  -2.78596   TAGCTCGCGAGGACA      TGGGGGGCGGCAAC GTACT GCGGCCGCCCCCCC      GTCGGATCACTTCCT  72 32
    Ajs_1311 1377921 .. 1377950 - -13.5  -3.96624   GATTGGCAGGAGAAA       GGCGCCGAAGGCC TTGC GGCCTTCGGCTCG        GGAGGACGGAACCAC  90 455
    Ajs_1309 1376204 .. 1376233 -  -7.7   -2.9627   GCAATGCAGGAGAGA       GGATCACGCGGCC CGCC GGCCGCGTCGTGC        ATCAATCCGAAGCGC  53 27
    Ajs_1308 1375387 .. 1375407 -   -14   -5.0065   CAGGGACAAAGAAAA            GCCCCGCA ACGAG TGCGGGGC            GGTCATGACGGTGCG 100 52
    Ajs_1306 1374382 .. 1374422 -   -17  -4.36914   TGGGCGGGGAGAAAA CGCGAGGGACATG-GCCTC GAAC GAGGCGCATGTCCCTCATG  GGGTCCCGTGAACGC 100 68
    Ajs_1305 1373591 .. 1373608 - -11.3  -4.27211   TGGAAAGAAAGGAAA             CAGCGTC AGGT GACGCTG              ATCGTTGGCGTTTGG  89 13
    Ajs_1304 1372696 .. 1372738 - -13.4  -3.53091   ATCGCTCCTGTGAAA GTGCGCCGGCCCGGCTCTC TGGCGG GAGA-CCGGGCCGGCATGC GGTGAGGACAAGGAA  79 62
    Ajs_1303 1372375 .. 1372390 - -10.4  -5.06414   TGCGGGCAAGAAAAA              GCCCCT CGAA AGGGGC               TGGAGGAATCAGGCT 100 34
    Ajs_1302 1371174 .. 1371199 -  -9.7  -4.14257   TGGAAGAATGAGAAA         GGCCTCCATCC GATG GGATGAAGGGC          CTGTAGTGCACGCGG  79 112
    Ajs_1300 NONE
    Ajs_1299 NONE
    Ajs_1298 1368137 .. 1368152 -  -7.5  -2.59683   AGGGGATCGGACAAG              GCCGC GTAGAT GCGGC               GGTTGGCGCGGCTGT  51 69
    Ajs_1296 1366814 .. 1366832 - -11.6  -4.43307   GTGCGAACAAAAGAA             GGCCCCCG ATG CGGGGGCT             GCGAGGCGGTTGCCG 100 43
    Ajs_1294 1364990 .. 1365013 -    -8  -4.93316   GAAGAATAGGAAAAA          GCAAGGCCCC GTGA GGGGCCATGT           CGGATCAGAACGAAG  88 30
    Ajs_1293 1364199 .. 1364237 -  -6.8  -4.38712   GGGACCTCCAGAAAA TGGCCAGGG--CCTCCCCC GCAT GGGGAAGGAACCCCGGC-A  GGTGGATGAAGAACA  73 60
    Ajs_1292 1363778 .. 1363811 - -18.9   -2.6563   CTCCTGAAGAATCGA     GCCGGAGGC-CTCCCC GTG GGGGAGAGCCCCCAGC     GGGTGATGGAGTGCC  87 70
    Ajs_1291 NONE
    Ajs_1290 1363025 .. 1363059 - -17.8  -2.76046   TGAACGGGAACAGCA     CCGCCCGCTGGGGCAA GTA CTGCCCCAGGGGGTGG     AAGAAAGCCGCTCAG  86 37
    Ajs_1289 1362310 .. 1362321 -  -5.8  -3.14132   GTTGGCGGGGATGAA                GTGC GAGA GCAC                 GCCTTGGCGTGCCTC  51 51
    Ajs_1288 1361151 .. 1361166 -  -6.1  -2.62616   CGATGTGGTACAGCA              GGACG GCAGGG CGTCC               GGTGGATTAACGGAT  46 32
    Ajs_1287 1360746 .. 1360777 -  -7.2  -2.81133   CATTGAGCCACGACA      CCCCTGCCGGAG TGAAGTGG CTCCGTCAGGTG       GATGAGGATGACGAT  52 49
    Ajs_1286 1360290 .. 1360330 - -12.6  -5.27335   TGCTCCAAAGAAAAA TGGGGCATG-CACCACCCC CAGC GGGGCAATGGCATGCCCCG  TGGTGGGAAGAGAAT 100 101
    Ajs_1285 1357954 .. 1357977 - -18.2  -5.40474   AGGCGCTGAAAAAAA          GCCGACGACC TCTC GGTCGTCGGC           ATTGCGTGAAGTTCA 100 38
    Ajs_1279 NONE
    Ajs_1278 1353514 .. 1353527 -  -3.7  -3.05384   GTCTCCGTCAGGGAA               TCGCC AAAC GGCGG                GTCTGCTCGCCGGCC  45 4
    Ajs_1277 NONE
    Ajs_1276 NONE
    Ajs_1275 NONE
    Ajs_1274 NONE
    Ajs_1273 1348211 .. 1348235 - -12.2  -3.25223   CAGGGAGAGCACGAA         CT-GCGGGTCG ACAG CGACCCGCCAG          CGAAGAACTATGTTC  71 494
    Ajs_1264 NONE
    Ajs_1263 NONE
    Ajs_1262 1340222 .. 1340245 -  -7.4  -2.87132   TGCTGCTCGGACATA          CCGGCCTCGCT TAC AG-GATGCCGG          TAGCTTCGGTGAGCA  53 12
    Ajs_1261 NONE
    Ajs_1260 NONE
    Ajs_1259 NONE
    Ajs_1258 NONE
    Ajs_1257 NONE
    Ajs_1256 NONE
    Ajs_1255 1332594 .. 1332605 -  -4.4  -4.51174   GGATGAGAATGAAAA                GATG CATC CATC                 ACCGCGATTGCAGTG  69 118
    Ajs_1254 1331979 .. 1331998 -   -15   -5.1356   CGCCACGAAGAAAAA            GCGGAGGC CGAA GCCTCCGC             GCTGATCAACGAAGC 100 51
    Ajs_1253 1331406 .. 1331428 -  -4.6  -3.14468   GCGCAGCAGATCGAA           TGGGCGCGTC ATG GCTGCGCCCT           CCGGTGCTGCTTGAT  48 11
    Ajs_1252 NONE
    Ajs_1251 NONE
    Ajs_1250 NONE
    Ajs_1249 1326818 .. 1326828 -  -4.6  -3.34222   ATCAGTACCGCAGAA                 CGAC TCG GCCG                 CGCCTTGGGTCGCGG  49 375
    Ajs_1245 1323714 .. 1323743 -  -3.4  -3.16881   CATCGACCCCATGAA       GCCCTCGGCCGA ATCCCA CCGGTCGAGTAC        CGTGTCAAACTGTTC  44 83
    Ajs_1241 1319278 .. 1319298 -  -4.7  -3.87815   CCTTACCGGCAGAAA            GTTCGCATC ACA AATGCGAAT            GATTATAATTCATTG  60 112
    Ajs_1240 1317078 .. 1317096 -  -8.8  -3.14881   CAAGGGGCGCAGGAA             GTTCGTGG TGA CCACGGAC             AGCAAACATCGCCTG  56 252
    Ajs_1238 1315524 .. 1315540 -  -4.3  -3.05384   CCGCCTTGGATTCAA              CCCGTCG CTG CAACGGC              TCGCTGAAGTCTACT  45 5
    Ajs_1235 1312383 .. 1312396 -  -5.9  -3.06696   GCTGGGTTCAAGACA               CCACG ACTT CGCGG                AACATGCCGGCATCC  49 4
    Ajs_1234 1311211 .. 1311228 -  -8.3  -3.46068   TGCCGAACCGAAAGA             CCCGCGG CGAG CTGCGGG              CTGCTCAGCTTGAAG  63 166
    Ajs_1232 NONE
    Ajs_1231 NONE
    Ajs_1230 NONE
    Ajs_1229 1305203 .. 1305220 -  -6.2  -3.73534   GAAGCTGACCAAGAA             CCGGGG CTCATT CCCCAG              CGATGAGGCGCTGAG  60 388
    Ajs_1220 1294859 .. 1294886 -  -3.4  -3.55444   GCCCGAGTGGGCAAA        GCCAATT-CAGTG CCT CGCTGGAACCGGC        GTCCAAGACCCGGCG  49 384
    Ajs_1205 1275695 .. 1275712 -  -9.8  -3.06696   TGGTGCTCGAATACA             CGCGCG AGATGG CGCGCG              TCATGCAGCTGGCGG  60 452
    Ajs_1202 NONE
    Ajs_1201 1271535 .. 1271573 -  -7.3  -3.13728   ACCACGCACATGGAA  CCGC-TGGTGCAGCGCCTG CTG CTGGCGC-GCACCCCGCCG  CTGGAGCGCCTGTGG  52 155
    Ajs_1199 NONE
    Ajs_1198 1268450 .. 1268483 -  -3.1  -2.54166   TCTTGAATGAAAAGT     GGCT-CCAGCGCTTGC TAG ACAAGCGCCAACAGCT     CTCATTTTTGAAGAA  39 27
        thyA NONE
    Ajs_1196 NONE
    Ajs_1195 1266360 .. 1266370 -  -2.4  -3.98204   AAATAGAGTGATAAA                 GGCG GGG CGTC                 AGCTGCGGCGCTCGA  57 24
    Ajs_1194 1265373 .. 1265393 -  -8.2  -4.08692   CAAGGCGCTGGAAAA            CGCACTGC CACCC GCCGTGCG            CACCCTGGTCGAGCG  72 154
    Ajs_1159 NONE
    Ajs_1158 NONE
    Ajs_1157 1221028 .. 1221060 -  -3.9  -2.84602   TCCAGCGCATGAAAG      GGCACGCCCGCCA TGGTCAC CGGCTGGCCGGCC      GACTGGCCGCGTTGG  44 304
    Ajs_1155 NONE
    Ajs_1154 1216751 .. 1216763 -  -4.7  -2.89564   GTGTGAGCGGATAGA                GGGCG AGT CGCCG                CGGGCTGCCGCGGGC  46 59
    Ajs_1153 1214892 .. 1214913 -  -5.1  -3.01924   GACCTGGGCCGAATA           GCC-GCGTCA GGA CGACGCCAGC           GCCAGGTCCCCCTTG  47 10
    Ajs_1151 NONE
    Ajs_1150 1211851 .. 1211872 -  -6.5  -2.92789   AGATCGAAGAGCAGA           TGGTCACGC ATGT GCGCGAGCA            CTTTGGGGAGCTCGA  48 522
    Ajs_1148 NONE
    Ajs_1147 1208649 .. 1208700 -  -9.2  -3.06696   CCGGCCCGCAAGAGA TGGCGCAGGGGGTG-GTGGCGTTGC TGG GCGACGCGGCGCACCCCATGCGGCC CTACCTGGCGCAAGG  57 399
        apaH 1202715 .. 1202752 -  -9.1  -4.30576   CGCGCAGCATGAAAA   CGCTTTCTTCGCGG-GCC AGC GGTGCCGCGAAGAAGGCT   TTTGGCGATTTGCGG  83 91
    Ajs_1140 NONE
    Ajs_1139 1198596 .. 1198620 - -15.7  -3.36803   CAATTTGACTTACAA          CCCTCCCAGGC CAG GCCCAGGAGGG          TTGCGCGTCATCAGG  84 36
    Ajs_1138 NONE
    Ajs_1137 NONE
    Ajs_1136 NONE
    Ajs_1135 NONE
    Ajs_1134 NONE
    Ajs_1133 1191587 .. 1191604 - -10.5  -3.42605   CCCACTGAAAACACA             GGCCGCC GTTC AGCGGCC              TTTTCATTTAAAAGA  68 94
    Ajs_1126 1182975 .. 1183011 - -11.6  -4.83615   GATTGCGTATAAAAA    TGGCCGCTGGCGCT TATGGAGCG AGCGCCAGCAGCTA    TTAATACAGGAGTTG 100 47
    Ajs_1124 1181462 .. 1181488 -  -4.3  -2.71712   TCGCGCCTTGCAAAC        CAGGGCGCGCGC CATC GCGGGGGCC-TG         TGCGGCGGCGTCTTA  42 38
    Ajs_1119 NONE
    Ajs_1118 NONE
    Ajs_1117 1174365 .. 1174400 -  -7.6  -5.15381   AAGAGAGGCAAAAAA    GAGCTGCTCGCGCTTAT TGG ATAAGCGTT-GCAGCCC    GATTTGGCTTAAATG  93 34
    Ajs_1116 NONE
    Ajs_1115 NONE
    Ajs_1114 1169797 .. 1169814 - -14.1  -5.02074   GCAGGGCGTAAAAAA             GCCCGGC ATGG GCCGGGC              TGGAGCATTGGTGCG 100 49
    Ajs_1113 1167889 .. 1167906 -    -4  -5.14563   CGGTGCACGAAAAAA             CAGGCC AACACG GGCCGG              ACAAGCTTACTGCAT  84 165
    Ajs_1112 1165498 .. 1165533 - -13.3  -5.02074   TGATTTGTCAAAAAA    CAAGGGCCGCGCACCA TGGCC TGGCGGGCGGCCCT-G    CTGTGCGCTGCGCTT 100 39
    Ajs_1111 NONE
    Ajs_1110 NONE
    Ajs_1108 1161560 .. 1161585 -  -6.7  -4.59853   GTAAGCCGGCAAAAA         CACGGGCCCGG CTGT CCAGGTCCGTC          CTCCTGCCTCAAGGG  78 92
    Ajs_1107 1160100 .. 1160116 -  -2.1  -3.54424   GGGGATGCGGTGAAA              GTGCGGC GAC GGCGAAC              GCAAAGGTGGCGAAG  49 102
    Ajs_1106 1159339 .. 1159375 - -13.9  -4.21908   GACTATGAGTGAAAA    TGGCTGTTAGCGCTT TACGGAT AAGCGCTAACAGCTA    TATTTTTAATAGCAA  93 48
    Ajs_1105 1158712 .. 1158728 -  -7.2  -5.72616   ATGGACATAAAAAAA              GCGCCC TCGCG AGGCGC              TGATTTTTCTGGCGG 100 201
    Ajs_1095 NONE
    Ajs_1094 1148519 .. 1148546 -  -4.8  -3.87994   ATCGACGTGGAGAAA        TCCAGCTACGCA TCTC TGCCTTACTGGA         TGCGCCATCGTGCGT  60 491
    Ajs_1091 1145118 .. 1145150 -  -6.2  -3.35679   TTCGTGGATCCAGAA      GCGCTGCAGTGGTT TGATC AACCCCTGCATCTC      TCGCGCGAAGGTGTG  55 228
    Ajs_1081 1136653 .. 1136668 - -11.8  -5.09762   ATTGCAATACAAAAA              GGCGGC CTGG GCCGCC               TTTTGCTATTTATAT 100 89
    Ajs_1074 1128983 .. 1129014 -  -7.9  -4.14392   GGGCAAGGTGCAAAA      CGCCGG-GCGCATG CTCAC CGTGTGCACCGGCG      AAGTGCGCGCGTACA  69 128
    Ajs_1071 1124631 .. 1124657 - -10.1  -3.48276   TCCCTGTCCAGACAA        CCCGCAGCGGTG CACG CGCC-CTGCGGG         TTTTTCTTGGGCGGT  68 108
    Ajs_1069 1123885 .. 1123910 - -16.1  -4.85599   CTTACGCCATAAAAA         GGCCGCAGAGC GTGA GCGCTGCGGCC          TTTTTGCAGGGCGCG 100 66
    Ajs_1066 1119882 .. 1119907 - -13.3  -5.26875   TTTTCAAGCAAAAAA         CCCATGGAGCG CGGG CGTTCCATGGG          TTTGCGGGCGATTGG 100 62
    Ajs_1065 NONE
    Ajs_1064 NONE
    Ajs_1063 1116455 .. 1116469 -  -2.8  -3.44146   GTCTCCTATAAGGAA               GCTGAT TCG ACCAAC               ACCGGTCAAGATAGT  49 42
    Ajs_1062 1115132 .. 1115150 - -14.6  -3.51976   AAGGCGCCAAACGAA             GCTGGGGT GCT ACCCCAGC             GAGGCTTGGCAACGC  83 228
        proX 1113993 .. 1114026 - -12.3  -3.53012   TTGGCCGTGGTGAAA     CGCCGAGGATGGCAC GGCC GGGCCACCCCCGGGG      CCTGGCCGCGGTGGC  74 204
    Ajs_1060 NONE
    Ajs_1059 1111707 .. 1111723 - -10.1  -4.10855   AAAAGTGCTCCAAAA              GCGCTCG TGG CAAGCGC              AAAAAGCTATCAAAA  81 52
    Ajs_1058 1110291 .. 1110303 -  -9.1  -3.30441   CACCATCCCTGAGAA                CGAGC CCG GCTCG                TCCATCATGCCCGGC  61 505
    Ajs_1056 1107537 .. 1107562 - -16.3  -4.57073   TACCCGTTGGAAAAA         CAAAAACCGCC CGAG GGCGGTTTTTG          TCACGGACGTTCACA 100 52
    Ajs_1055 1106392 .. 1106406 -  -8.5  -4.81734   AAAGAGTAGCAAAAA               CCGCG TTCGG CGCGG               CAACTTGCCTCTCAG  88 37
    Ajs_1052 NONE
    Ajs_1051 NONE
    Ajs_1050 1100922 .. 1100937 -  -7.5  -2.62933   GAAGCCGCTACATTA              CGCCG GGGATG CGGCG               GCGGGGCTACGGTTG  51 32
    Ajs_1049 1099327 .. 1099351 -  -5.5  -3.40403   TCCGCGCGAGGACAA          GGCCGGGCGCC TGC AGCAGCTGGCC          AAGAATGCCGAGCTG  53 460
    Ajs_1045 1096186 .. 1096222 -  -5.2  -5.24531   AGCTCTCATAAAAAA   TAGCTGCTAAGGCGCTTG CAG CAAGCGCGG--GCAGCTA   TTGTTTTATGAGTGT  91 46
    Ajs_1042 1087904 .. 1087927 -  -2.2  -4.46581   GAAAATGGGAGAAAA          CGGCGCACGC AATA GCGCAGGCGG           TCCACGCGCTGCCGC  65 87
    Ajs_1041 NONE
    Ajs_1040 1085151 .. 1085168 - -14.1  -5.37593   GCGCAAACTAAAAAA             GCCCCGG CGTA CCGGGGC              TTTTTAGTGGGGTTG 100 48
    Ajs_1035 1079006 .. 1079042 - -25.4   -5.1356   GGGTATGAATAAAAA    TAGCTGCCAGCGCTTG TGTAT CAAGCGCTGGCAGCTA    TTGTAATGGTAGCGT 100 60
    Ajs_1034 NONE
    Ajs_1033 1077093 .. 1077129 -  -3.5  -3.55622   TGTAACGTTGCGAAA    GCGTCCGCGTGAGCG TCAGCCG CGCTCAACCGGCCGG    CCGGGGTCGCTGCAC  51 4
    Ajs_1032 NONE
    Ajs_1031 NONE
    Ajs_1030 1074351 .. 1074365 -    -7  -3.28712   GCGCCTTGTGGATAA               CGCTGG CTG CCTGCG               CCAGCCGGGCGGCTG  55 108
    Ajs_1029 1073442 .. 1073456 -  -3.4  -3.05384   CGGTGGGGGATGCAA               GGGGCG GGA CACCGC               TCAGCGCGCCTTGGC  43 26
    Ajs_1028 1071259 .. 1071271 -  -5.5  -4.03234   GTGTTTTGATAGAAA                CCGAG GGG CTCAG                AACGTGTAGTCCAGC  65 22
    Ajs_1027 1068955 .. 1068978 -  -5.2  -3.01791   AGGCCTGCCTGAACA          CGCGCGCGAT CTCC ATCACCCACG           TCTGACGCCGCCCTT  47 87
    Ajs_1024 1065573 .. 1065610 -  -2.8  -3.90112   CTGGTTTGAAGGAAA   TTGCCATATAGCGCTTA TTTGG TAAGCGCCA-ACAGCTA   TTAAAAATATAGCAA  56 47
    Ajs_1023 NONE
    Ajs_1022 1064582 .. 1064600 -  -4.4  -3.76224   GCCGCATCGACGAAA             TCCTGGCC ACC GGCCTGCA             TGCCTACCTTACGCA  58 144
    Ajs_1018 1058557 .. 1058567 -  -8.2   -3.9122   GAGGCTGGGAAAGAA                 CGCG GTG CGCG                 GCTCAGGCCAGCTCG  71 28
    Ajs_1013 NONE
    Ajs_1012 1049762 .. 1049777 -  -4.6  -2.83271   CCATCGTCAGAAGCA              GGCCCA GATC TGGTCC               GCCAGCGTCAGCATG  46 1
    Ajs_1011 NONE
    Ajs_1010 1048199 .. 1048214 -  -2.5  -2.60813   GAGCGTTCCAAATAC              GCTGC AAGCTG GCAAC               AGGCTGGGTGAAATT  38 46
    Ajs_1009 1047021 .. 1047049 -    -3  -3.59262   GGCCAGATTGCGAAA       GCGCAGCATCGTG TAGG CGCAA-GCGGCGC        GGCGCCGCCCCTTTT  51 39
    Ajs_1008 1046205 .. 1046225 -    -9  -3.53012   CGGGCTTGCTGCAAA           CCCCGTACC GCAA GGT-CGGGG            TTTTCTTTTTTGGGC  65 47
    Ajs_1004 1043407 .. 1043427 - -18.3  -3.58726   GCCGCGCACACACAA            CGGGCTCCC GAG GGGAGCCCG            TTTTTTTGGGGCTGT 100 60
        pyrG NONE
    Ajs_0999 1037970 .. 1038008 -  -5.2  -3.90588   GAGTTTTTAATCAAA   TTGGCCGCTAGCGCTT TTCCATC AAGCGCTGGCAGCTAT   CAAATGGGTAGCATC  60 334
         eno NONE
    Ajs_0996 NONE
    Ajs_0995 1035539 .. 1035559 -  -6.7  -4.72272   TTCTGGGAGGAAAAA            CTGCTGCGC TTC GCGCCTCAG            CAGGGCGATAGCGGC  84 346
    Ajs_0992 1033348 .. 1033365 -  -9.1  -3.68073   CATTGTAGGGAAGAA             CCCCCGA TGGC TCGGGGA              TGGCAGTGCGGCTGG  71 48
    Ajs_0991 NONE
    Ajs_0990 1030573 .. 1030620 - -14.1  -2.52543   ATCCGCCTGAACTGA CGGCTG-CCCC-GTGCGCGCGCC GGCC GGCCCGCGCACAGGGGACATCGG GTTTATTCGTCGGCC  71 28
    Ajs_0986 1026465 .. 1026487 -    -7  -5.28166   GAAAATGAATAAAAA           TGGCCTGCAA CGC TTGCAGAACA           AGCGCGAGTAGCTAT  91 54
    Ajs_0983 NONE
    Ajs_0982 1022664 .. 1022690 - -10.9  -4.54449   ATATTCCATATAAAA        CGCCACCGCCTC GCGA GAAG-GGTGGCG         TTCTGCATGCTGAGG  95 407
    Ajs_0979 NONE
    Ajs_0978 1019426 .. 1019446 -  -3.9   -3.6053   CGGGGGAGAAAGGAA            TGCCGCT GGGTGGT AGCGGCG            TGAGAGGGTGTGTGG  53 47
    Ajs_0977 1017736 .. 1017753 - -14.1  -5.43866   CAACCGCTAAAAAAA             GCCGGCC CAGG GGCCGGC              TTGCGCGGTGTGCCG 100 66
    Ajs_0974 NONE
    Ajs_0973 1014074 .. 1014084 -  -2.4  -3.73224   CGACGCCTCAGGAAA                 CCGC CGA GCTG                 CTGAATGAGGGCATT  51 143
    Ajs_0951  992884 ..  992909 - -15.5  -5.18355   GCCAAAAACGAAAAA         GCCCTGGAACC TTGC AGTTCCAGGGC          TTACCGTTTGGTGCG 100 257
    Ajs_0950  992111 ..  992132 -  -8.7   -2.9356   ACTCAGAGGCAGATA           TCGTCCGTG TGGA CATGGACGA            TGCGATGGACACCAC  54 172
    Ajs_0942 NONE
    Ajs_0941 NONE
    Ajs_0940  986591 ..  986607 - -10.8  -4.17701   CCCAGAAATGACAAA              CCCGGC GCGCG GCCGGG              CATGTGGAATTTCTG  84 70
    Ajs_0934  981566 ..  981585 -  -8.5  -3.96892   AAGGCTCAGGAGAAA            GCCGCGC TCGCCC GCGCAGC             GAAGGTGGCCGCCAC  73 131
    Ajs_0925 NONE
    Ajs_0924  971842 ..  971880 -  -5.1   -3.9392   GTCCAGGTCAAAGAA  GGGGCTCC-CCGCGCTCC TGGC GGAGAGCGGAGGAGGCGG   TGCGCCCGGGCCGCG  60 43
    Ajs_0923 NONE
    Ajs_0922  970373 ..  970400 -    -2  -2.57132   CGCTTGCCTGACAAC        CGTTTCAGTATC AAAA GACATTGAAACC         CTTATCTGGCAAGCG  38 49
    Ajs_0921  968564 ..  968591 -    -9  -4.09685   CTTGAGCGTGCAAAA        GCACCGCGAGGG CTAG CCCCCTCGCTGC         CGTGCCGGGTTACCG  76 521
    Ajs_0912 NONE
    Ajs_0911  961262 ..  961276 -  -2.8  -3.44146   GTCTCCTATAAGGAA               GCTGAT TCG ACCAAC               ACCGGTCAAGATAGT  49 464
    Ajs_0909  959768 ..  959810 - -17.8  -3.96327   ATCTCCGATGACAAA GGGCGCAAAATTCCAAAGCG TGA CGCCTTGGATTTCTGCGCAC TTGTGGCGCCCAAGC 100 375
        ppnK NONE
    Ajs_0903 NONE
    Ajs_0902  952238 ..  952263 -  -3.4  -4.26327   CAGCTACTAAAACAA        TAGC-TGTCACC TAGC GGTG-CATGCTA         GATGCCGTCGAGCTC  64 23
    Ajs_0898 NONE
    Ajs_0897 NONE
         ipk  944848 ..  944859 -  -5.8  -3.75153   CCGTCTGAATTTAAA                TCCC GTGT GGGA                 AATAATCTTTGGCAG  60 153
    Ajs_0895  943799 ..  943820 - -14.5  -2.76696   CTGTCTCCGAACAAG           CAAGCCTCC CGAA GGAGGCTTG            GGGCTGTGACACCTC  75 61
    Ajs_0894  943001 ..  943034 - -13.2    -4.431   CAGGGAGCCACAAAA     CGC-CAACGGCCCAC GCGAG GTGGGCCGTTGAGAG     GCAAGAGGCCGCCCC 100 67
    Ajs_0893  941868 ..  941896 -  -8.2  -4.95758   AGCATAGGACAAAAA       CCGCGGGCGCATGG CGG CCAT-C-CCCACGG       GGGCACAGGGGTGGG  90 435
    Ajs_0891 NONE
    Ajs_0890 NONE
    Ajs_0889 NONE
    Ajs_0888  938084 ..  938114 -  -5.3  -2.78384   CTGCTTTTTACTACA      GGGCGCGGCCGGGCG TGG CGCGCGG--GCGCCG      TGCGGCTAGAGCGCG  44 31
    Ajs_0887  936467 ..  936481 -  -5.6  -3.48276   GCGGTGTGGAGAGAA               CGGCTG TTC CACCCG               GGCGGAAGTGGCCGT  55 75
    Ajs_0886 NONE
    Ajs_0884 NONE
    Ajs_0883  932534 ..  932587 - -10.3  -3.24924   GGCGCAGCTACAAGA GCGACGCGCGTGCGCGCCAGACG-GCC GACC GGCACG-C-GGCGCGCACG-GAGCTGC TGGGCCGCCTGGAGT  63 236
    Ajs_0862  909526 ..  909547 - -15.1  -4.67038   GCGGGAAAAGGAAAA           GCGGCCCCC AGGC AGGGGCCGC            TGACCGAAGGGGCGT 100 77
    Ajs_0861 NONE
    Ajs_0860 NONE
    Ajs_0859 NONE
    Ajs_0858 NONE
    Ajs_0857  902995 ..  903007 -  -9.1  -2.70932   CGTGGCGCTGAACGA                GCCCT ACA AGGGC                GTGGAGCTGATCGGC  55 287
    Ajs_0854  900108 ..  900122 -  -2.1  -4.13767   GTCTTTATGCGAAAA              CTG-GC CAGA GCGCAG               GGCTGGATTGCGCCA  58 189
        hemA  898600 ..  898629 -  -2.8  -2.96695   GGGCTTATGAAATCA      GGGGTGC-GCGAGC GAGC GC-CGCTACAGCCC       GTTTTTGCTGTGCGA  42 17
        prfA NONE
    Ajs_0850 NONE
    Ajs_0849  896074 ..  896090 - -10.8  -5.76633   GCAGACATAAAAAAA              CCGCCC GGTGT GGGCGG              TTGGTCCATTGGCGG 100 55
    Ajs_0848  894451 ..  894472 -  -5.1  -3.28712   GCTGGGCCGCTACAA           CGGCAGCC GGGGCAA GGC-GCCG           TATCCGAGCGCCGTG  51 178
    Ajs_0845  890840 ..  890854 -  -2.7  -3.53091   ATCCTCGCGGCCAAA               CGTGC GGCGG GCTCG               GGTGCTTCCACCGTC  49 507
    Ajs_0840  886968 ..  886992 -   -10  -5.00138   GATTCAAAGCAAAAA          GCCCAAGTGA TTGAT TCACATGGGC          TTTTTCTGTGGTTTC 100 144
    Ajs_0839  886246 ..  886275 -  -3.5  -2.96695   CTTGGGATCAAATGA       GCGTACTTGCG ATTGGTCG CGCATGTACGG        ATCGTGTTTGTTGTC  42 194
    Ajs_0838  884954 ..  884992 -    -9    -3.646   CTGAACCACATAGAA  CAGGCCGCCTTCGACGTG TCGGG CACGCCGAAGG-AGC-TG  CTGAGCTTGTCGCTC  68 160
    Ajs_0836 NONE
    Ajs_0835  881413 ..  881442 -  -5.8  -4.23723   TAATAGTACCGAAAA       TCGAGGGAATTT TCGTGG AAATTACCCCGA        TAAGCGACGATCCTT  67 490
    Ajs_0834 NONE
    Ajs_0833 NONE
    Ajs_0832 NONE
    Ajs_0831 NONE
    Ajs_0830  871589 ..  871639 - -21.8  -3.53012   TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG 100 34
    Ajs_0829 NONE
    Ajs_0828  868575 ..  868586 -  -2.2  -2.78216   CATTGGTATCAATCA                CTGC CTTC ACAG                 CGCACCACCTTGTTG  39 20
    Ajs_0827 NONE
    Ajs_0826  867260 ..  867270 -  -2.4  -2.72829   GATACGCCTCGAAAC                 GACG CCC CGGC                 CAGTTCAGGAGAGGG  39 99
    Ajs_0825  866104 ..  866130 -  -2.1  -3.01791   AGCGTGCTGCGAAGA         CGTCACGATGG AGCCG CCAGCGTGTAG         CCAGCGTACCGCATT  41 309
    Ajs_0821  863697 ..  863715 -  -3.8  -2.98823   TGGCGTTGACACACA             GCAGCA GGTCTTG CGCTGC             TTTGCGCAGCTCGGC  45 89
    Ajs_0819 NONE
    Ajs_0817  861046 ..  861074 -   -11  -3.25539   CAACTGGAACGAATA        CCCGCAATGGGA TGGCC TCCCCTTGCAGG        GTGAATACCACTGCT  66 235
    Ajs_0815  860417 ..  860435 -  -4.6   -4.4715   CCTCAAGGTAGAAAA             TCTGAG GGCATGG CTCAGA             GGGTTTTGCGATGTT  71 145
    Ajs_0814 NONE
    Ajs_0813 NONE
    Ajs_0812  858800 ..  858812 -  -3.3  -4.07568   TGGGTGCGGGCAAAA                GCTGC ATC GAAGC                CTTCGGCCTGCGGGT  58 44
    Ajs_0810 NONE
    Ajs_0809 NONE
    Ajs_0808  851939 ..  851953 -  -4.2  -3.48036   CAGCAGTACAAGGAA               GATTGC CGA GCAGTC               GGAAAGCGGCCTGTT  49 459
    Ajs_0806  849585 ..  849608 -   -11  -2.75528   AGTGCGAAGACACGA          GCTGCCCAGA CGCG TCTGCGCAGC           GATTGCAACGGCCCA  63 94
    Ajs_0805 NONE
    Ajs_0804 NONE
    Ajs_0803 NONE
    Ajs_0802 NONE
    Ajs_0801 NONE
    Ajs_0800  843761 ..  843793 - -13.5  -3.26779   GCTTCAAAATACATA      GCTGCTTGCGCTT GCTGGAT AAGCGCTAGCAGC      CTTTTCTTCAAATAT  77 40
    Ajs_0794  836364 ..  836385 -  -3.6  -4.08216   CTACGCCCGTGAAAA           CGGACAGG GTATGG CCTTCCCG            TTGGAAGAAGAAGTG  61 484
        mscL  831908 ..  831937 - -18.5  -3.84451   TCCCTGAAATGCAAA       GGCCCGCCGCCCC AGGA AGGGCGGTGGGCC        TTTTTACGCGCCCTC 100 51
    Ajs_0785 NONE
    Ajs_0784  827173 ..  827209 - -21.1  -5.28942   GAGCGGAAACAAAAA    TAGCTTCCCGCGCTT TGTAGAT AAGCGCGGGAAGCTA    TTTTTTTAATAGCAA 100 47
    Ajs_0773 NONE
    Ajs_0772 NONE
    Ajs_0771 NONE
    Ajs_0770 NONE
    Ajs_0769 NONE
    Ajs_0768 NONE
    Ajs_0767 NONE
    Ajs_0766  806825 ..  806839 -  -3.4  -3.72576   CCGGCGCGTAGGAAA               GCTCAG CAG CCGGGC               AGGGCGCGGCCCTTG  54 13
    Ajs_0747 NONE
    Ajs_0746  789819 ..  789860 - -10.1   -5.0133   CAGGGGCTTAAAAAA GATAGCTGCC-AGCGCTCGC CCA GCAAGCGCTAGGCGGCGATT GGGCTAGACATTACG 100 36
    Ajs_0739 NONE
    Ajs_0738  777293 ..  777343 - -21.8  -3.53012   TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG 100 34
    Ajs_0729  766448 ..  766466 -  -5.2  -3.35798   AGCGCTCAGCCACAA             CGCCACTT TGC AAGCGGGG             CAAGCGCTCCAGTTC  50 125
    Ajs_0726  765126 ..  765139 -  -5.2  -3.29144   TCATTCGCTCCACAA               CGGC ACGCCA GCCG                GACGACGCGCACGAC  50 224
    Ajs_0725  764454 ..  764488 -  -2.1  -3.73224   CCAGTGGCCAGGAAA    TCCG-CAAC-CGCCCGC CAT GCCTGCGCGTTGGCAGA    GCAAGAGACAGGGAC  52 376
    Ajs_0724  763187 ..  763197 -  -4.6  -3.43773   CGGCAGAGTCAAAGA                 GCCA CTG CGGC                 CGGTGCGCAGGGGTT  53 8
    Ajs_0723  762698 ..  762716 - -10.2  -3.33696   CGCGTTGGTAATCAA             CGGCGTGG AAT CAACGCCG             CCTTCACCATCCGCG  66 148
    Ajs_0721 NONE
    Ajs_0720 NONE
    Ajs_0719  758914 ..  758928 -  -4.2  -3.91084   TCACCGGGAACGAAA               CGCCAA AAT CTAGCG               TCAATAGCACCGCCC  58 75
    Ajs_0718  758268 ..  758284 - -10.8  -3.55444   TTTCGACCCTTGAAA              GCCCGC ACCCA GCGGGC              TTTTTTACGCACCTC  73 30
    Ajs_0717 NONE
    Ajs_0716 NONE
    Ajs_0715  755608 ..  755640 - -10.3  -3.14132   CGGCGCTGGCAGCAA      CTGCACCGCGGCGTG TAC CTGGCCGCGGGGCTG      GCGATCCTGCACTTT  62 221
        engB NONE
    Ajs_0708  747902 ..  747937 -  -9.9  -4.77036   GTGTACCAGTAAAAA    TGGCT-CTAGCGCTTA TCTGG TAAGCGCTAGCAGCTA    CGAAAATCATAGTTC 100 32
    Ajs_0705  744569 ..  744583 -  -5.6  -4.07568   GCGCTGGTCCTAAAA               GCCCAG TTC CTGCGC               CACCGTGGCCGGCGC  65 282
    Ajs_0704  744118 ..  744139 -  -2.9  -2.66316   CTGGGCATCAGAGTA           GAGGCG-CTG GCG CAGGCGCTCC           GTCATCTGGCGAAAC  39 76
    Ajs_0703  743847 ..  743876 -  -8.4  -3.06796   CTGCAGTGTAGGCAA       CTGCGGGGCCGC ATCCGG GCGGCACCGCTA        TTTGATGGCTTTGCG  57 23
    Ajs_0702  742921 ..  742933 -  -3.3  -5.00616   TGTGTTCTCAAAAAA                GTGAG CTG CTCGC                GCTTGATGGATAAGC  78 42
    Ajs_0701  741692 ..  741712 - -10.3  -4.04806   TGCGACATCAAACAA            CGCGCCCTC AAC GCGGGCGCA            GGGAACTGACACAGC  78 173
       groES  741285 ..  741295 -    -4  -3.85698   TTTGGCTCCTACAAA                 TTTG AAT CAAA                 TGGGCTGCCAACGCT  58 89
       groEL  739561 ..  739581 - -16.9  -6.11644   GCAGGCAAAAAAAAA            CCCGCAAGC ACT GCTTGCGGG            CTGGGGTGCTGCCTG 100 72
    Ajs_0698  737890 ..  737925 - -10.3  -3.02511   GGGACGGCCCGAAGA    GGCCGACGGCCACCG GCGCTT CAGCGGCAACCGGCC     GAGCACATTTCTGCT  60 291
    Ajs_0695 NONE
    Ajs_0694  732977 ..  733011 - -15.7  -3.16564   GCCCCATCCCAGCAA    CCGCC-GCGCAGCGGGC TTG GCCCGG-GCGCTGGCGG    TGTCCCCCCTCCCGT  83 101
    Ajs_0681  715953 ..  715974 - -12.3  -3.29144   CGACCGTCCCGAGAA           CGGCGGCCAG AAC CTGGCC-CCG           CGTCCCATGGAGACC  71 345
    Ajs_0679  713889 ..  713909 -  -2.5   -3.8505   ATGAACACTATTAAA            TCAATAGCT GCT AGCGCTTGA            TGGGCGGGCGCTGGA  54 58
    Ajs_0678 NONE
    Ajs_0677  711966 ..  711979 -  -3.7  -3.23335   GGTGACAAACACATA               CGGCC GCTG GGCCC                CGCGCCTGGCCACGC  47 501
    Ajs_0675 NONE
    Ajs_0674 NONE
    Ajs_0673  710349 ..  710394 -  -5.9  -3.06796   GCGCATGCTACGCAA CGGGCGCTACCCAGCTCAGCAG CAG CCGTGGAGCGGGCTTG-GCCCG GCCACCGGCTGCGTC  49 106
    Ajs_0672 NONE
    Ajs_0671 NONE
    Ajs_0670 NONE
    Ajs_0669 NONE
    Ajs_0668 NONE
    Ajs_0667 NONE
    Ajs_0666  702047 ..  702060 -  -3.7  -3.53012   CTCCTGTTTTTGAAA               GGCGC CGCT GCGGC                CTGTCCGCTCAGTCG  51 34
    Ajs_0664  700162 ..  700189 -    -9  -3.58343   GCGAGCAGGGGCAAA        CTGGGCGGGCCG CAGT CGACCCGTTCAG         CCCGCCATGGTAGCC  68 22
    Ajs_0663 NONE
    Ajs_0662  697937 ..  697977 -  -3.7  -2.83343   ACATTCAGGAGTAGA  GCCGGCGCGCCGCCACA GGTTCAA CGCCGCGGGGGGCGGGC  TGTATCACCCTGTAG  44 5
    Ajs_0661  697357 ..  697371 -  -4.2  -4.02163   AGACATCAACAAGAA               CACCCT CCA AGAGCG               ACTGGCCCAGCAGGT  59 202
    Ajs_0657  691529 ..  691544 -  -3.2  -3.53811   GCTATGCTTTTGAAA              GCAACG GCGG CGTCAC               GCGGCATAGTCGAAG  51 22
    Ajs_0656 NONE
    Ajs_0655  687860 ..  687883 -  -7.4  -4.39287   GCAATCACAGCAAAA          CCGCGAGGC CATCGCC GCC-CGCGG          CGCGCAGTTGGGCTT  77 500
    Ajs_0652 NONE
    Ajs_0651  684341 ..  684397 - -10.8  -3.14132   GCTGCGCGTGAGCAA CGGCGGTGCGATTGACGCCGAACTGCTG CCC CGGCTGTTCG-CGCCATTCAC-CGGCCG GCGCAACCGGGCCGG  64 232
        infA  677318 ..  677333 -    -6  -3.17392   CACCTCTGAATCCAA              GCGCGC TGCG GCGCTC               TCGTTAGGTGCGCAC  51 439
    Ajs_0642  674135 ..  674154 -   -10  -2.62263   AGTCGGGGCAGAGGA            TCGC-CCCG GGT CGGGCGCGA            ACCGGCACGGGGCTT  59 52
    Ajs_0640  671459 ..  671475 -  -2.3  -2.78463   AGGTCGTGCAGGATA              GCTAT AAATTCA ATAGC              TGTTGGCGCTTGCTA  39 38
    Ajs_0639 NONE
    Ajs_0638 NONE
    Ajs_0634  665927 ..  665957 - -11.1  -5.52384   TCCTGAGCAAAAAAA       GCCAAGCGCGC CCGCCCATC GCGCGCTAGGC       GCTATAAATAGAGGA 100 56
    Ajs_0633  664868 ..  664892 -  -4.2   -2.8372   GAGCCTGGACGAAAT         CGCCGCGCTCA AGGC CGAG-GTGGCG          GCAGGCCGCAATCCC  43 447
    Ajs_0631  662410 ..  662444 -  -6.5  -2.62263   ACGTGCCCGACATCA    GCCCGATGAAC-CACCG TGG CGGCGTATCCAT-GGGC    GAAGGGCGTTACTCG  48 34
        anmK  661199 ..  661223 -  -6.3  -3.71848   GTTCGTCATCAAGAA          CCCGAATGCCG CTT CGACATGCGGC          TGCGGCTCCAGCTTC  59 121
    Ajs_0623  655470 ..  655481 -  -7.2  -3.02144   TTACTCCCCGCAAGA                GCCG GGCC CGGC                 GGCGCTAAACCACGG  54 78
        prfC NONE
    Ajs_0616 NONE
    Ajs_0615  646677 ..  646691 - -11.4  -5.11937   AATAAGCGCAAAAAA               CTGGCG TTT CGCCAG               CAACCCGTGGCACTA 100 497
    Ajs_0613  645448 ..  645478 -   -14  -4.28651   AGCAAAAGGGCAAAA       GGGCAAAAGGCGCC AAT GGCGCCTTTTGCTT       TTATTTTGATAGCTG 100 88
    Ajs_0606 NONE
    Ajs_0605  637819 ..  637830 -  -7.2  -3.29727   GCGAACGAATCAATA                GCCC AGCT GGGC                 AGGCAGCCACAGGGC  58 8
    Ajs_0604  636653 ..  636685 - -22.1  -5.03314   GTGAGGCGTAAAAAA      GCGGCTAGCGCCC GTGGTTA GGGCGCTAGCCGC      TTTTGATTTGATAGC 100 88
    Ajs_0601  633750 ..  633771 -  -4.3  -3.28924   CACCGTGCGCCAGAA           GCTGGTGAT CTTC AGCACCGGC            AAGGTGAGCGGCAAG  49 234
    Ajs_0590  621635 ..  621655 -  -7.6  -2.87931   CCCACGGTGCAGACA           CAGGTGCGG GCGG CCGCAC-TG            TCCGACCTGATCCGC  52 391
    Ajs_0580 NONE
    Ajs_0579  608893 ..  608905 -  -3.3  -3.05384   GCGCCCGTCAGGCAA                GCGCT GGC AGCTC                TTTATTTGAGAGCGT  43 44
    Ajs_0568 NONE
    Ajs_0567 NONE
    Ajs_0565  595992 ..  596006 -   -10  -3.15544   GGGCACCGGCACCAA               CAAGGC AAA GCCTTG               TGGGCCGGGGCTTTG  64 163
    Ajs_0564  594701 ..  594738 -  -7.8  -3.75153   TGGCTTGAAGCCAAA   TAGGCCTCCAGCGCTTA TGCAG CAAGCGCTGGCAGC-TA   TCAAAATCATTCTTC  65 441
    Ajs_0536 NONE
    Ajs_0535  557007 ..  557021 -  -7.8  -3.08679   TGTTCCCATCCAACA               CCAGCG ATG CGCTGA               CCAGCGGCGGCACCT  54 271
    Ajs_0533  555755 ..  555791 - -18.8  -5.40072   TTGCTCTCAAAAAAA    TAGCTGCCAGCGCTTG ATGGG CAAGCGCTGGCAGCCG    TTTTGGCTTGAGATT 100 49
    Ajs_0520 NONE
    Ajs_0519  541268 ..  541326 -  -3.7  -2.70932   TCCTTGTTGGAACCA CGCCGTCGT-CGTGCACCGCCGGCCTGG TATGGG CC-GGCGGGCGG-GAGTGCAGGACGGCG TTCAGTCGATGTGGA  42 27
        phhA  540198 ..  540212 -    -7  -3.02144   CCAGTTGGGTCAAGA               CGAGCC GCC GGCACG               CGCCGCAGTCTTCGT  51 216
    Ajs_0516  537606 ..  537616 -  -2.4  -3.63515   GGGCAGGTGGAATAA                 GCGG CAT CAGC                 TATGAAAATTGGAGT  49 56
    Ajs_0515  536579 ..  536596 -  -2.6  -4.15044   TGGTTTGGCAACAAA             CACACG GTTGGG CGCGCG              AAGTCCCGCCAAGTC  59 115
    Ajs_0514  534081 ..  534128 -  -4.9  -3.72576   TGTGGTGTCATCAAA TTTGATAG-CTGCTAGCGCTTG TCCAT CAGGCGCTAGCAGCCTATTTGA TTACAAGTCCAGGTT  58 26
    Ajs_0513 NONE
    Ajs_0512 NONE
    Ajs_0511 NONE
    Ajs_0510  531114 ..  531163 - -14.3  -3.32844   GGCGGCAGCCTACAA CG-CCGGC-CCGGGCCGCCCGCGC AACTG GCGC-AACGGCCCGGTGCTGGACG CGGCCATCTGGGCCG  75 283
    Ajs_0508  528735 ..  528745 -  -3.2  -3.53811   GTTATTTGCTTGAAA                 GCAC CGT ATGC                 CAAGCGCAAACCGCT  51 56
    Ajs_0507 NONE
    Ajs_0506  526858 ..  526871 -  -3.8  -2.80796   GCCCACCATGTAAAT               CTGC ATGGGG GCAG                TGTATTCAACCTGGA  42 329
    Ajs_0505  525378 ..  525427 - -11.3  -2.62184   TCGCGGCGGACAGGA GGCAGCGCGC-ATCTCCGGCGCGC TGG GCGCGGCCGATATCGCGCGCTGGG TGCAATCGGTGTAAG  62 184
    Ajs_0503 NONE
    Ajs_0502 NONE
    Ajs_0501  520377 ..  520396 -  -3.4  -3.61398   GCTGCGCGGCAAGAA            CGGCAACG CGGG CCATGCCG             GCCACAGCTACGTGG  49 523
    Ajs_0496 NONE
    Ajs_0495 NONE
    Ajs_0494 NONE
    Ajs_0493 NONE
    Ajs_0492 NONE
    Ajs_0491 NONE
    Ajs_0490  512750 ..  512768 -  -3.9  -3.15544   GGTCACCGGCAGCAA            TGTCTTCC ATCA GGA-GACA             GTGTGCCCGCGCGCC  47 52
    Ajs_0489  511749 ..  511760 -  -2.2  -3.13522   ATTGCGCGACGAAGA                GCAC GTTC ATGC                 ATTTGGCTCCCGAAC  43 20
    Ajs_0488 NONE
    Ajs_0487 NONE
    Ajs_0486 NONE
    Ajs_0485 NONE
    Ajs_0484  503942 ..  503960 -  -7.4  -3.50047   CCCATAAAGCCAGAA             CACCCCAA TTC CTAGGGTG             CTCCGTAAGTGCTTG  60 87
    Ajs_0483  498779 ..  498796 -  -8.3  -4.19678   TCAGAGTGGAACAAA             GGCCCCG CCAA CGGGGGC              ATGAGGGAAAACGGT  76 42
    Ajs_0482  498304 ..  498317 -  -3.7  -4.22652   CCAGACTAGGGAAAA               CGCGG AGAA CTGCG                CCGCCCGCTACGGTG  63 43
    Ajs_0481  497439 ..  497457 -  -7.3  -4.11484   CTGAAGGGTGGAAAA             GGCGGGC TCAGC GCCCGCG             CTCCAGCCGGTCGGC  72 14
    Ajs_0480 NONE
    Ajs_0479  494376 ..  494400 -  -7.8  -3.01712   TGTGGCGCTGGAACA         GGCG-GCACCC ATGT GGGTGCGCGGC          GTACACCAGCAGCTG  53 512
    Ajs_0470 NONE
    Ajs_0469 NONE
    Ajs_0468  481344 ..  481364 - -11.9  -2.73875   CTCGCCGGAAGACCA            TCCTTCGCC TGC GGCGAAGAA            CCCTGCGGGTTGATT  66 48
    Ajs_0467  480144 ..  480162 -    -3  -3.05384   TGTGGTTGGATGGAA             CGTCGC CTGAATT GCGCCG             GTCGGCGCGGAACAC  43 55
    Ajs_0466  478760 ..  478779 -  -6.4  -2.86271   TCCCGACGAGAAGGA            CGATGGCGC GCA GCGCC-TCA            GGGGACGTCCTTAGG  50 36
    Ajs_0465  477731 ..  477769 -  -3.7  -4.13945   AGGTTTAGGGCAAAA   TCGGCCTCCAGCGCTTG TCTGT CAAGCGCTAGCAGCTAT   TAATTTGAGAGTAAT  63 40
    Ajs_0464  476310 ..  476326 -  -2.9  -2.55351   GTGCCGGACATCAAG              GAAACCC CCG AGGCCTC              ACCGCCTGACAAATG  39 143
    Ajs_0463  475191 ..  475214 - -19.6  -5.14563   GTTCCCATGAAAAAA          CGCCCGGTGC GCGG GCACCGGGCG           TTGGCAGGAAAGGCG 100 74
    Ajs_0462  473872 ..  473887 - -11.8  -3.02511   GGTAGCGGTTGAAGA              GGCCGC TGCA GCGGCC               ACCGCCCCGGACGAG  65 198
    Ajs_0459  471889 ..  471904 - -10.4  -4.72272   GCCGCCCATGAAAAA              GCCCTC CGAA GAGGGC               TTGCAGGCTAAGCCG 100 56
    Ajs_0458  471209 ..  471225 -    -5  -3.53224   GATGCGCGCCCCAAA              GCCGGC TTAAG GCCTGC              TCACGCTATTCGCAC  53 65
    Ajs_0456  468899 ..  468910 -  -4.4  -5.02074   GGAGGCTTTAAAAAA                GAAC GGTC GTTC                 GTGTTTTGACTACAC  81 419
    Ajs_0451  462970 ..  463008 -  -6.1  -4.07568   GGTTTGGTGCCAAAA  GTG-GCTG-TGCCGCTTGA CAG TCAAGCGCTATCAGCTCAC  TTTTTGATAGTTAAG  65 36
    Ajs_0448 NONE
    Ajs_0447  458723 ..  458739 -  -3.5   -4.1899   GTATTCCACGGAAAA              GGGGCCG TGG CGGCCTT              CGTGCGCGGTCGCGG  61 89
    Ajs_0446  458219 ..  458244 - -16.1  -5.40072   CGGCCCCCAAAAAAA         GGCGCCGTGGC CAAG GCCACGGCGCG          CTGTGCCCCTCACGG 100 117
    Ajs_0430  437328 ..  437338 -  -2.4  -3.31144   GCTGCAGGCGCACAA                 CGGC ATG GCGG                 GCTGAGCGAGCGCGG  45 58
        purU NONE
    Ajs_0427 NONE
    Ajs_0426  432681 ..  432708 -  -8.4  -4.07568   GGCTTGGCTTGAAAA        GGCCGAAGGCGGC TAT ACCGCCTT-GGCA        AACTCGAACAATGTC  73 10
    Ajs_0425  431085 ..  431099 -  -7.8  -4.11216   TTGTCAGGGGTAAAA               GCGCCA TGC TGGCAC               CTGGTTGCGCGCCGC  72 77
    Ajs_0424  430365 ..  430387 -  -5.4  -3.06696   CGGTGGCCGAACACA           TCCGCGCTAC GGT GCAGCGCTGG           GACGCGCAGGAGATG  47 241
    Ajs_0420  426119 ..  426148 -  -4.1  -2.63208   GGGTAGTGAAAAAGT       GTGCGGGCCCGCCT TGG AGGGGGGTCAGC-C       GGGGAAGTTCTCGGG  41 20
    Ajs_0419 NONE
    Ajs_0418  424214 ..  424231 - -14.1  -3.53855   TCCGTCAAAAAGAGA             GGCCCGC AGGG GCGGGCC              GGGGGGGGCGAGTGT  81 48
    Ajs_0417  423223 ..  423249 - -13.7  -3.07443   TGACAGGTGATTGAA         CCACTGCCCGC CCTGC GCGGGCAGTGC         GCCTGGGGCCTCAGT  75 36
    Ajs_0413  420406 ..  420443 -  -4.6  -3.51232   TGGGCTTGAAATGAA   GGGCATGCCCGCGCCG ACCATG CAGCGGCGCCGTGCCC    GTGGCGCATGCCGGT  53 85
    Ajs_0410 NONE
    Ajs_0409 NONE
    Ajs_0408  414215 ..  414234 -  -9.2  -4.56358   GATAGTCAGAGAAAA            TGGCCCAC TTCG GTGGGCCT             TTTTGTTTTTGTTCA  91 133
    Ajs_0383 NONE
    Ajs_0382 NONE
    Ajs_0381  393662 ..  393680 -  -8.1  -2.79098   TTGACGCATGAATCA            GGC-GCCG AACT CGGCCGCC             AGTTCCTTGGCACGG  54 4
    Ajs_0374 NONE
    Ajs_0373  383543 ..  383553 -  -2.4  -3.03124   CCTCACGGTGGAAGA                 GGGC CAG GCCG                 CGAGCCACGCGGGCA  41 286
    Ajs_0365  374618 ..  374637 -  -2.1  -3.06073   GAGATGGCTGAAAAC            GCCATCA AAGGGG CAATGGC             ATGCTTTCTCTGCGC  41 67
    Ajs_0364  372534 ..  372553 -  -6.3  -4.09739   CGAATGGCGTGAAAA            CCGCGCC AATCTA GGCGCGT             GACGACGCCAAGGCC  67 287
    Ajs_0362  371086 ..  371105 - -13.6  -3.33737   CATCAAGGCCGACAA            CATCCGCC GGGT GGCGGATG             CGGGCGCGGACACGT  73 158
        apaG NONE
    Ajs_0359 NONE
    Ajs_0358 NONE
    Ajs_0357 NONE
    Ajs_0356  364416 ..  364447 -  -8.6  -3.13164   GCGGCAAGGATGCAA      GGGCCGACCGATGCT ACC AGCGGC-GCCGGCCC      GGTAGCGGGAGCGGT  58 40
    Ajs_0355 NONE
    Ajs_0354  362820 ..  362840 - -14.7  -3.44146   CCGCGCGACAAGGAA            GCCGCCCAG TGG CTGGACGGC            GCGCTCGAATCCATC  80 508
    Ajs_0342  351441 ..  351473 - -13.4  -5.47399   GGAAGGGCAAAAAAA      GAAACCCCGCGGGC GGCAG GCGCGCGGGGTTTT      CTCGTGCAGGCCCGA 100 70
    Ajs_0338  346790 ..  346819 - -16.5  -3.75665   GGAGAGTGTACGAAA       GCACAACGGCACC CGTG GGTGCCGTTGTGG        TCAAAATGGCCCCTG  93 84
    Ajs_0337 NONE
    Ajs_0336 NONE
    Ajs_0335  345417 ..  345431 -  -3.4  -3.73995   CCCCCTAGAAAAAAG               GGCCAG TAT CCGGAC               GGCACTGCGAAGGGA  54 116
    Ajs_0334  344839 ..  344860 -  -8.6  -3.41234   GAGTAAGTCAATCAA           CGCCTCCC TCCCGC GGGTGGCG            ATGCGGCCACCCATC  63 51
    Ajs_0325  333788 ..  333804 -  -7.3  -2.69799   TCAGTGGATAGAGTA              TTGGCCT CCG AAGCCAA              GGGTCGTGGGTTCGA  52 297
    Ajs_0323 NONE
    Ajs_0321  326967 ..  326980 -  -3.7  -5.00616   CCGTTGGGGAAAAAA               CGGGC AGGC GCGCG                TCGTGACCTATGTCA  81 38
    Ajs_0320  326288 ..  326310 - -14.9   -3.6053   CCGTCCAGAAACCAA           CAAGCCGGC ACGCG GCCGGCTTG           TGACGAGGCGAAAAG  85 45
    Ajs_0316  323334 ..  323373 -  -2.9  -4.34488   GATAGCTACAAGAAA  TATAGCTATCAGCGCTTG AAGGG CAAGCGCTAGCGGC-ATA  TTTTGCTTACAACCC  64 46
    Ajs_0315 NONE
    Ajs_0314  321529 ..  321566 - -15.5  -2.70932   GGTGCGCGGCAACCA   CGACC-GCCACGCGGGCG ACC CACCGGCGTGGCTGGGCG   CGCGCATCGTGGAGG  75 352
    Ajs_0300 NONE
    Ajs_0299 NONE
    Ajs_0298  305852 ..  305862 -  -8.2  -3.65351   GTATTCCGAGTCAAA                 CGCC AGC GGCG                 TGCGCCTGCTGGTCG  65 10
    Ajs_0292  300702 ..  300727 - -13.4  -3.62591   TGCATAAGCGCGAAA         GGCCGATTTC GTTCAG GAAATCGGCC          TTTCTTCTGAAGAAA  81 47
    Ajs_0290  299312 ..  299328 -  -4.3  -2.86601   GGCATGAAAAAGGCA              GGGGCCA GTG TAGCCGC              ACCGCTGTGGGCACT  44 40
    Ajs_0289  298699 ..  298711 -  -4.7  -3.60098   ACGCCGCAGGCGAAA                CGCCG CCC CGTCG                CGAGATGCGGGTGGC  55 100
    Ajs_0266  281687 ..  281697 -  -2.4  -3.53012   GGGGTTGGGGTCAAA                 TCGG CCT CCGG                 CGCTTATGGAGAAAG  47 53
    Ajs_0265  280427 ..  280444 -  -6.3  -5.14626   AGCAGGAAAACAAAA             CCCT-GCT GGA AGCCAGGG             CGGCGTGGCCGTGCA  88 61
    Ajs_0264 NONE
    Ajs_0263 NONE
    Ajs_0262 NONE
    Ajs_0261  275352 ..  275388 - -14.5  -4.62471   AATTTATAGAGAAAA    TCACTGCTAGCGCCCAC CTG GTAAGCGCTAGCAGCTA    GATTATTGATAGCGT 100 61
    Ajs_0259 NONE
    Ajs_0258  273118 ..  273128 -  -4.6  -2.71364   TTACCGTGCCAAGCA                 CGCG GGG CGCA                 ACCGCATCGAGGCCA  44 52
    Ajs_0249  264406 ..  264426 -   -14  -5.38054   CTCGACAAATAAAAA            GGCACCCG GGTTG CGGGTGCC            TTGTGAAGGGGCGTC 100 202
    Ajs_0248 NONE
    Ajs_0247  262454 ..  262479 - -10.5  -5.28176   TTCAGGTACAAAAAA         TCCGGCATTGCG GAT CACAA-GCCGGA         AACCAACGCCTGCGC 100 133
    Ajs_0246  261628 ..  261642 -  -9.2  -3.59583   AGAAGCATGGGCAAA               GCGGGC CGG ACCCGC               AGGCCCGGCGCAGTC  68 43
    Ajs_0245 NONE
    Ajs_0244  259998 ..  260027 - -10.1  -4.25104   GCGCTTGTATCAAAA       GGATTTCGATATG TTTT CATGTCGAAACCC        AAGTACATCAAGCGC  85 87
    Ajs_0243  258869 ..  258884 -  -3.2  -3.30124   CGTGATCGTGGAGAA              CGCG GGCTTTGG CGCG               GCGGCGGCGGCGCCC  46 198
    Ajs_0238 NONE
        gatA NONE
    Ajs_0236  251030 ..  251045 - -10.4  -5.71712   CGGCACACAAAAAAA              GGCTCC ACCG GGAGCC               TTCTTTTTTGATAGC 100 66
    Ajs_0233  248707 ..  248722 -  -8.2   -4.0896   AAAGCGCGTGGAAAA              CGCCGA ACAC CCGGCG               CGAATAGCTCCTGAA  73 42
    Ajs_0229  244756 ..  244793 - -12.1  -4.44608   CTTATTCAAAAACAA   TA-GCTGCCAGCGCTTGT TAA ACAAGCGCTGGAGGCATA   TTTCATGCAAAACGC 100 28
    Ajs_0228  243997 ..  244033 -   -19  -4.56597   CTCTTGCGGCAAAAA    TAGCATTCAGCGCTTA TCCAG CAAGCGCTGAATGCTA    TCAGGTTGATAGTGG 100 47
    Ajs_0216  233404 ..  233458 -  -4.9  -4.13014   TCGACAGCGCCAAAA CCTGGACCGGCTCTGGCCTGATGCGCT TCG AGCGCAAC-GGCAAGAAC-GACGCGGG CCTGCGCCCCGGCAA  65 343
    Ajs_0212  230301 ..  230318 -  -4.7  -3.28712   CTTTGCGGGCCAGAA             GGCCTAC CTGT GCGGGCC              GCCGCCCATGATCGA  49 145
    Ajs_0205  223921 ..  223932 -  -7.2  -3.14132   TGTGCGCCTCACGAA                GCCG CCAG CGGC                 CGCTCTTGCAGGCGC  56 7
    Ajs_0204  222685 ..  222726 - -14.5  -2.78816   TCATGGGCCATGAGA TGGCCCACGCGC-TGCGCG AGCATG CGCGCTCGCGCGTGG-CCA AGAGCCAGGTCACCA  72 400
    Ajs_0199  218100 ..  218110 -  -2.4  -3.45032   CAACAAGAGCGAGAA                 GGTC AAA GCCC                 TGAAGCAAAAAGCCA  46 464
    Ajs_0194 NONE
    Ajs_0193 NONE
    Ajs_0192 NONE
    Ajs_0191 NONE
    Ajs_0189 NONE
    Ajs_0188  205499 ..  205517 -  -5.3  -2.82516   CGGGCGAGCAGTACA            TGGAGCAC CTGC GTGC-CCA             GGGCCTGTACCAGCA  46 417
    Ajs_0179  197768 ..  197784 -  -3.6  -4.06182   GTATCTATAAAAAGA              GGAGCG GCTTG CGCTCA              ATCCCAGGTCATTTC  58 110
    Ajs_0178 NONE
    Ajs_0175  194052 ..  194094 - -16.3  -3.04322   GTGAAGGCGCGAAGA CGCCCAGCCTTCGCGGC-GCA TTG TGCCGGCGCGACGGC-GGGCG CGCGGGGCTGCGCGG  84 60
    Ajs_0174 NONE
    Ajs_0173  192239 ..  192274 -    -4   -3.0263   AGGAGCCCGGCAAGA   CCCTGG-C-CGACCTG CTGCGC CAGGTCGAGGCCCGGA    TGCGTCACTGCCCGG  44 306
    Ajs_0161 NONE
    Ajs_0160  179029 ..  179059 -    -8  -4.32651   AATAACGTAGCAAAA       CGGGGCGGGTGGGG CAT CCCCGCCCGGGGCG       CTCAGAAGGCTTCCC  76 27
    Ajs_0158  176742 ..  176761 - -11.4  -2.72461   CAACCTGGGCGAAAT            GCCCGACCG CCC CGG-CGGGC            GCATGAGCGGCGGAG  62 361
    Ajs_0153  171160 ..  171185 - -10.3  -5.13722   GCTACGAAAATAAAA         GCGGCCTGCGC TTGC GGGCAGGCCGT          TTTGAGGGGGATTGG 100 115
        aroK  168509 ..  168526 - -14.1  -3.54382   CCGCAAGAGAACCAA             GGCCCCG CATG CGGGGCC              TTTTTCATGTCTGAG  81 53
    Ajs_0145 NONE
    Ajs_0144  159444 ..  159482 - -10.4  -4.00042   GTTGCTATGAAATAA   GGAGCTTTCAGCGC TTGATAGAAGG GCGCTGAAAGCTCT   TTTGGCTTGTAATCT  78 51
    Ajs_0139  154315 ..  154341 -  -4.4  -2.92026   GAGTGCAACATCACA        TGCTGTCGGCC TGCAGG GGCCGA-AGCG         CCGGGTGGTTTTTGT  44 515
    Ajs_0137 NONE
    Ajs_0136  152320 ..  152356 -  -2.3  -4.07568   TTTGCTCCTTTAAAA   GGAGCTGTTGGCGCTTG TCATG CAAGCGCTAG-AGC-CC   TATTTGACTGTAAAA  57 25
    Ajs_0135  150832 ..  150849 - -14.1  -5.30616   GCAGGCAAAGAAAAA             GGCGGCC CGCA GGCCGCC              TTGCGCACGGAGCGG 100 47
    Ajs_0134  149240 ..  149256 -  -6.5  -3.40403   GCTGTTGGAGGACAA              GGCCG TGCCCTG CGGCC              CGATCAACCACGTCG  55 308
    Ajs_0132  146785 ..  146811 - -13.7  -3.53012   GCGCCGCCGGGCAAA         GTGCAGGTGCG CCTGC CGCACCTGCGC         GAGGAACTGCTCAAC  78 414
    Ajs_0119 NONE
    Ajs_0118  131938 ..  131956 -  -8.8  -3.55444   CCGCGACGTTCGAAA             CTGGCGCG ACC CACACCAG             CGGACGCCGAGCAAG  65 153
    Ajs_0117  130710 ..  130722 -  -3.3  -2.56124   TTGATTCAAACAGAT                TGCGG GGC CTGCA                GTGCGTCGATCTGCT  39 3
    Ajs_0116 NONE
    Ajs_0115  127982 ..  127995 -  -3.8  -4.09685   CTGCATCGCTTAAAA               CTGG CGCAAT CCAG                GCCAGGGCAGCCGCG  61 142
    Ajs_0114  127036 ..  127063 -  -6.8  -3.76224   GCTGCAGGCACGAAA        CCGGAGCGGGCC TTCA GACCCTCGCCAG         GCGCTGCAGCGCCCG  62 11
    Ajs_0113  125662 ..  125676 -   -10  -3.05596   CAGTCGGTCATGGAA               GGACTG GGC CAGTCC               GGCGCGCGGGCCGTG  60 92
    Ajs_0104 NONE
    Ajs_0103 NONE
    Ajs_0102  113869 ..  113890 - -10.1  -3.39895   GCCGCCACCAAGCAA           GGGCCTATG CCGG CCTAGGCCC            GCGCCGCGCCGAGCC  68 138
    Ajs_0101  112427 ..  112446 -  -8.5  -3.07043   CGGACCAGGCCAACA            GCCGCGG CGAGGT CCACGGC             GGATCGATCGCTACG  55 323
    Ajs_0092  100260 ..  100276 -  -5.1  -4.07568   GGCGGTTCTTCAAAA              GGTCC GAGGGCG GGACC              GGGCGCGCCGCGCGG  63 68
    Ajs_0091   99440 ..   99452 -  -4.8  -3.25102   ACGGCACGCACAAGA                CGCA GGCAG TGCG                GGCCTGGCTAGCAGC  49 392
    Ajs_0089   97196 ..   97212 - -10.8  -5.75342   GCGGCGCAAAAAAAA              GCCGGC ACAAG GCCGGC              TGAAAAGCAAGGTGC 100 197
    Ajs_0088   93425 ..   93438 -  -5.3  -4.14392   TGGCAACCCTTAAAA               CACTA CATA TAGTG                TTCACCATACCTATC  65 293
    Ajs_0087 NONE
    Ajs_0086 NONE
    Ajs_0085   90145 ..   90180 -  -8.8  -3.61398   GGCCGGCCCCAAGAA    GCCGCGCCGCGCCAGCG CCC CGCCGGTG-GCAGCGGC    CAACCTGGGACAGGA  62 270
    Ajs_0083 NONE
    Ajs_0082   86584 ..   86612 -  -7.3  -3.57263   AGGGCGACGTTCAAA        GCCAAATAGGCCC ATA GCGCCCAACTGGC        AAGCGCGAACAGCTA  62 58
    Ajs_0081 NONE
    Ajs_0080   83475 ..   83518 -   -11  -3.36803   CAAGTGTAGCCACAA CGCC-CCCGCGCGTGCACGG GCCTTA CC-CGCACGCGCGTGCGGCA CGGCGCTCTCAGCGC  69 34
    Ajs_0079   83217 ..   83234 - -14.1  -4.92756   ATCACCAAAAACAAA             GCCCCGC AGAG GCGGGGC              TGGGTGGCGAGCGGG 100 49
    Ajs_0078   80977 ..   81003 - -15.9  -5.17353   ACATTCATGAAAAAA        CCCCGCG-CCAC AGAT GTGGTCGCGGGG         TTGTGTGTGTAGGCC 100 74
    Ajs_0076 NONE
    Ajs_0075   78383 ..   78394 -  -2.2   -3.0771   CCGGAAACGAGAAAT                CAGA CTAA TCCG                 CGCTGGCGCCTGTTG  41 108
    Ajs_0074   77490 ..   77502 -  -3.3  -2.70932   CTTTGCCGGCAAGGA                CGACC TGT GCTCG                GCCGCCATGGTGCAT  40 458
    Ajs_0071   74772 ..   74800 -  -5.9  -4.11183   GCCGAGGAGAAAGAA        GCCATCACCCCCA ACA TGCTGGTGATGGG        CAAGGTGCAGGCCGG  66 117
    Ajs_0068   71796 ..   71821 -  -3.9  -5.18726   CGGCGAGAAGAAAAA         GACG-GCCTCGG TGG CCAAGGAGCGCC         TGCAGATCATCCTGG  83 305
    Ajs_0055   59926 ..   59936 -  -6.8  -3.63515   GCTGAGCGGCAAGAA                 GCAG GAG CTGC                 CCGTCAAGAAGCTGC  61 187
    Ajs_0052   55481 ..   55512 -  -7.3  -2.70932   CCTGCTGGCCAATGA     GCCGCGCGAACAGCG TCAG CGC-GTT-GCGCGCC      TGTGAAGTGAGCTCC  52 522
    Ajs_0050 NONE
    Ajs_0049   51325 ..   51338 -  -3.7  -4.14243   CATTCCATTGCAAAA               GGGCC ATGG GGCTC                TCCTTGTGTGAAAGC  63 221
    Ajs_0048   49687 ..   49723 -  -8.6  -3.29144   GCAGGCGGTGGACAA   GGCCCTGGCGCGCCACG GCAG CGCCGCCCGCCAG-ACC    GCGCCGGCGGACGCC  58 347
    Ajs_0046   47327 ..   47337 -  -8.2  -3.54424   CTTCATCGCCTGAAA                 GCGG CAC CCGC                 TGAGGCGTTTTCCGC  65 137
    Ajs_0044   45279 ..   45299 -  -6.8  -3.55622   TCCAACCTTCCGAAA           GCC-GCAGC GCAG GCCGCAGGC            TGTGGGCCGCAGGCG  59 247
    Ajs_0042   43895 ..   43929 - -15.7  -4.67755   ATATCCATGGAAAAA     CCCCGCCCGCACCCT GGAGG ACAGTGCAGGCGGGG     GGTGGTGGCGGCCCG 100 139
    Ajs_0041   42623 ..   42637 -  -2.7  -3.32844   GCGGCCATTCTAGAA               GTCCG GGCTG CGGCC               TGCGGGCCGCGTGTT  45 105
    Ajs_0040   40849 ..   40881 - -12.5  -3.16191   CGACATGCTGATCAA      GCGCGCCGCGCCGCC TGG GGCCACGGGGCGCGT      GTACGGCACGGTGTA  69 299
    Ajs_0038   38876 ..   38899 -  -4.4  -2.52775   TTCATACAAAAGCAC          GTCCGCCTCA CGAC TGCGGCGAGC           CCAGGAAGCGCCCCG  41 9
    Ajs_0037   37985 ..   38030 - -11.8  -3.04144   GGCGCATGGCGAACA CGGCCGAC-GCCGCAGTGCTG CCGGC CAGCAGCGCGGCCAGCAGCCG CCGCACGCCGCGGCG  65 184
    Ajs_0035 NONE
    Ajs_0034   35716 ..   35744 - -23.2  -5.40072   CGCCCCTGAAAAAAA        CGCCAGCGCGGC TCAAG GCCGCGCTGGCG        TTTTTGCTTTCAACT 100 129
    Ajs_0025 NONE
    Ajs_0024 NONE
    Ajs_0023   26030 ..   26057 - -19.8  -3.35679   CGCCGGCACGCACAA        GCCGCGCCCCGC AGAT GCCGGGCGCGGC         CATATGGGCCTTACT  95 36
    Ajs_0022   24633 ..   24660 - -21.4  -3.19091   ATATCCATCCATGAA        GCATCACGCCCG GCGC CGGGCGTGATGC         TTGGCGGGCCGCCTG 100 43
    Ajs_0021   23429 ..   23476 -  -9.6  -3.01712   CGCGCTGGTGGAAGA GTCCGCCGCGGCGGCCGAGTCGC TGC GCGAGCAGGCCGCC-CGCCTGTC GCAGGTGGTGAGCCA  57 333
    Ajs_0018 NONE
    Ajs_0017 NONE
    Ajs_0016 NONE
    Ajs_0015 NONE
    Ajs_0014   16290 ..   16312 - -16.3  -5.60993   CGCGGCATAAAAAAA           GCCACCCGG TCCCG CCGGGTGGC           TGGTGGGTGGGCACC 100 176
    Ajs_0011   13482 ..   13514 - -10.5  -2.86124   GCTACGGAAACAGTA      GCTGCTTGCGCTTGT CAG ACAAGCGCTAGAGGC      CGATTGGGCTTGAAA  61 64
    Ajs_0009    9248 ..    9275 - -14.8  -5.86061   TCTGACGAAAAAAAA        GCCCACGCGCCG TTGC CGGTGCATGGGC         TTGGGGCCTGGCTTG 100 56
    Ajs_0007 NONE
    Ajs_0006    6252 ..    6288 - -10.8  -4.72272   GGCTTGCAGGAAAAA    TGGCTGCTGGCGCTTG ATGGG CAAGCGCTGGCAGCTA    TCAATAATGAAGCAC 100 309
    Ajs_0004    4022 ..    4060 -  -8.7  -2.62263   AGGGCGTGGAGACCA  GCGCGCAGCGCGACTGGC TGGC GCACGCCG-GCTGCGCGG   TGTACCAGGGTTACT  52 181
