M3Q_1012	PWY-6519	8-amino-7-oxononanoate biosynthesis I
M3Q_1013	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
M3Q_1021	PWY-4381	fatty acid biosynthesis initiation I
M3Q_1021	PWY-6799	fatty acid biosynthesis (plant mitochondria)
M3Q_1021	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_1022	PWY-5367	petroselinate biosynthesis
M3Q_1022	PWY-5971	palmitate biosynthesis II (bacteria and plants)
M3Q_1022	PWY-5973	<i>cis</i>-vaccenate biosynthesis
M3Q_1022	PWY-5989	stearate biosynthesis II (bacteria and plants)
M3Q_1022	PWY-5994	palmitate biosynthesis I (animals and fungi)
M3Q_1022	PWY-6113	superpathway of mycolate biosynthesis
M3Q_1022	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
M3Q_1022	PWY-6519	8-amino-7-oxononanoate biosynthesis I
M3Q_1022	PWY-6951	M3Q_1022
M3Q_1022	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
M3Q_1022	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_1022	PWYG-321	mycolate biosynthesis
M3Q_1027	PWY-6167	flavin biosynthesis II (archaea)
M3Q_1027	PWY-6168	flavin biosynthesis III (fungi)
M3Q_1030	PWY-5155	&beta;-alanine biosynthesis III
M3Q_1034	PWY-7560	methylerythritol phosphate pathway II
M3Q_1037	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
M3Q_1055	PWY-5381	pyridine nucleotide cycling (plants)
M3Q_1055	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
M3Q_1082	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M3Q_1082	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_1082	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_1082	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
M3Q_1083	PWY-6749	CMP-legionaminate biosynthesis I
M3Q_1084	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_1084	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M3Q_1094	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M3Q_110	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M3Q_1102	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
M3Q_1102	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
M3Q_1106	PWY-4041	&gamma;-glutamyl cycle
M3Q_1106	PWY-5826	hypoglycin biosynthesis
M3Q_114	PWY-6840	homoglutathione biosynthesis
M3Q_114	PWY-7255	ergothioneine biosynthesis I (bacteria)
M3Q_1216	PWY-5874	heme degradation
M3Q_1216	PWY-5915	phycoerythrobilin biosynthesis I
M3Q_1216	PWY-5917	phycocyanobilin biosynthesis
M3Q_1216	PWY-7170	phytochromobilin biosynthesis
M3Q_1224	PWY-7254	TCA cycle VII (acetate-producers)
M3Q_1225	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
M3Q_1225	PWY-7494	choline degradation IV
M3Q_1226	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
M3Q_1226	PWY-7494	choline degradation IV
M3Q_124	PWY-6857	retinol biosynthesis
M3Q_125	PWY-5669	phosphatidylethanolamine biosynthesis I
M3Q_126	PWY-5350	thiosulfate disproportionation III (rhodanese)
M3Q_1263	PWY-2723	trehalose degradation V
M3Q_1263	PWY-6317	galactose degradation I (Leloir pathway)
M3Q_1263	PWY-6737	starch degradation V
M3Q_1268	PWY-6891	thiazole biosynthesis II (Bacillus)
M3Q_1268	PWY-6892	thiazole biosynthesis I (E. coli)
M3Q_1268	PWY-7560	methylerythritol phosphate pathway II
M3Q_127	PWY-5381	pyridine nucleotide cycling (plants)
M3Q_1270	PWY-2201	folate transformations I
M3Q_1270	PWY-3841	folate transformations II
M3Q_1282	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
M3Q_1282	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_1282	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M3Q_1282	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M3Q_1299	PWY-5278	sulfite oxidation III
M3Q_1299	PWY-5340	sulfate activation for sulfonation
M3Q_1299	PWY-6683	sulfate reduction III (assimilatory)
M3Q_1299	PWY-6932	selenate reduction
M3Q_1300	PWY-5278	sulfite oxidation III
M3Q_1300	PWY-5340	sulfate activation for sulfonation
M3Q_1300	PWY-6683	sulfate reduction III (assimilatory)
M3Q_1300	PWY-6932	selenate reduction
M3Q_1306	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_1310	PWY-5704	urea degradation II
M3Q_1311	PWY-5704	urea degradation II
M3Q_1312	PWY-5704	urea degradation II
M3Q_1321	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_133	PWY-6167	flavin biosynthesis II (archaea)
M3Q_133	PWY-6168	flavin biosynthesis III (fungi)
M3Q_133	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
M3Q_134	PWY-6167	flavin biosynthesis II (archaea)
M3Q_134	PWY-6168	flavin biosynthesis III (fungi)
M3Q_136	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
M3Q_136	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
M3Q_136	PWY-6896	thiamin salvage I
M3Q_136	PWY-6897	thiamin salvage II
M3Q_137	PWY-5269	cardiolipin biosynthesis II
M3Q_137	PWY-5668	cardiolipin biosynthesis I
M3Q_138	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
M3Q_139	PWY-6749	CMP-legionaminate biosynthesis I
M3Q_140	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_140	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_144	PWY-5028	L-histidine degradation II
M3Q_144	PWY-5030	L-histidine degradation III
M3Q_146	PWY-5028	L-histidine degradation II
M3Q_146	PWY-5030	L-histidine degradation III
M3Q_147	PWY-5028	L-histidine degradation II
M3Q_147	PWY-5030	L-histidine degradation III
M3Q_1474	PWY-5381	pyridine nucleotide cycling (plants)
M3Q_1485	PWY-5686	UMP biosynthesis
M3Q_1487	PWY-4983	L-citrulline-nitric oxide cycle
M3Q_1487	PWY-4984	urea cycle
M3Q_1487	PWY-5	canavanine biosynthesis
M3Q_1487	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_1487	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M3Q_152	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M3Q_1525	PWY-6610	adenine and adenosine salvage IV
M3Q_1530	PWY-2941	L-lysine biosynthesis II
M3Q_1530	PWY-2942	L-lysine biosynthesis III
M3Q_1530	PWY-5097	L-lysine biosynthesis VI
M3Q_1530	PWY-6559	spermidine biosynthesis II
M3Q_1530	PWY-6562	norspermidine biosynthesis
M3Q_1530	PWY-7153	grixazone biosynthesis
M3Q_1532	PWY-1042	glycolysis IV (plant cytosol)
M3Q_1532	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_1532	PWY-6901	superpathway of glucose and xylose degradation
M3Q_1532	PWY-7003	glycerol degradation to butanol
M3Q_1534	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_1549	PWY-5686	UMP biosynthesis
M3Q_1564	PWY-4381	fatty acid biosynthesis initiation I
M3Q_1576	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
M3Q_1591	PWY-3341	L-proline biosynthesis III
M3Q_1591	PWY-4981	L-proline biosynthesis II (from arginine)
M3Q_1591	PWY-6344	L-ornithine degradation II (Stickland reaction)
M3Q_1604	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
M3Q_1604	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
M3Q_1615	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M3Q_1628	PWY-1361	benzoyl-CoA degradation I (aerobic)
M3Q_1628	PWY-5109	2-methylbutanoate biosynthesis
M3Q_1628	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
M3Q_1628	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
M3Q_1628	PWY-5177	glutaryl-CoA degradation
M3Q_1628	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_1628	PWY-6435	4-hydroxybenzoate biosynthesis V
M3Q_1628	PWY-6583	pyruvate fermentation to butanol I
M3Q_1628	PWY-6863	pyruvate fermentation to hexanol
M3Q_1628	PWY-6883	pyruvate fermentation to butanol II
M3Q_1628	PWY-6944	androstenedione degradation
M3Q_1628	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
M3Q_1628	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
M3Q_1628	PWY-7007	methyl ketone biosynthesis
M3Q_1628	PWY-7046	4-coumarate degradation (anaerobic)
M3Q_1628	PWY-7094	fatty acid salvage
M3Q_1628	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
M3Q_1628	PWY-735	jasmonic acid biosynthesis
M3Q_1628	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
M3Q_163	PWY-2941	L-lysine biosynthesis II
M3Q_163	PWY-2942	L-lysine biosynthesis III
M3Q_163	PWY-5097	L-lysine biosynthesis VI
M3Q_165	PWY-6123	inosine-5'-phosphate biosynthesis I
M3Q_165	PWY-6124	inosine-5'-phosphate biosynthesis II
M3Q_165	PWY-7234	inosine-5'-phosphate biosynthesis III
M3Q_1653	PWY-5169	cyanurate degradation
M3Q_1653	PWY-5703	urea degradation I
M3Q_1659	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
M3Q_1704	PWY-1361	benzoyl-CoA degradation I (aerobic)
M3Q_1704	PWY-5109	2-methylbutanoate biosynthesis
M3Q_1704	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
M3Q_1704	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
M3Q_1704	PWY-5177	glutaryl-CoA degradation
M3Q_1704	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_1704	PWY-6435	4-hydroxybenzoate biosynthesis V
M3Q_1704	PWY-6583	pyruvate fermentation to butanol I
M3Q_1704	PWY-6863	pyruvate fermentation to hexanol
M3Q_1704	PWY-6883	pyruvate fermentation to butanol II
M3Q_1704	PWY-6944	androstenedione degradation
M3Q_1704	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
M3Q_1704	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
M3Q_1704	PWY-7007	methyl ketone biosynthesis
M3Q_1704	PWY-7046	4-coumarate degradation (anaerobic)
M3Q_1704	PWY-7094	fatty acid salvage
M3Q_1704	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
M3Q_1704	PWY-735	jasmonic acid biosynthesis
M3Q_1704	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
M3Q_1705	PWY-1361	benzoyl-CoA degradation I (aerobic)
M3Q_1705	PWY-2361	3-oxoadipate degradation
M3Q_1705	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
M3Q_1706	PWY-1341	phenylacetate degradation II (anaerobic)
M3Q_1706	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
M3Q_1716	PWY-5506	methanol oxidation to formaldehyde IV
M3Q_1732	PWY-6215	4-chlorobenzoate degradation
M3Q_1738	PWY-6832	2-aminoethylphosphonate degradation II
M3Q_1745	PWY-723	alkylnitronates degradation
M3Q_1749	PWY-1361	benzoyl-CoA degradation I (aerobic)
M3Q_1749	PWY-5109	2-methylbutanoate biosynthesis
M3Q_1749	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
M3Q_1749	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
M3Q_1749	PWY-5177	glutaryl-CoA degradation
M3Q_1749	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_1749	PWY-6435	4-hydroxybenzoate biosynthesis V
M3Q_1749	PWY-6583	pyruvate fermentation to butanol I
M3Q_1749	PWY-6863	pyruvate fermentation to hexanol
M3Q_1749	PWY-6883	pyruvate fermentation to butanol II
M3Q_1749	PWY-6944	androstenedione degradation
M3Q_1749	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
M3Q_1749	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
M3Q_1749	PWY-7007	methyl ketone biosynthesis
M3Q_1749	PWY-7046	4-coumarate degradation (anaerobic)
M3Q_1749	PWY-7094	fatty acid salvage
M3Q_1749	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
M3Q_1749	PWY-735	jasmonic acid biosynthesis
M3Q_1749	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
M3Q_1766	PWY-4381	fatty acid biosynthesis initiation I
M3Q_1766	PWY-5743	3-hydroxypropanoate cycle
M3Q_1766	PWY-5744	glyoxylate assimilation
M3Q_1766	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_1766	PWY-6679	jadomycin biosynthesis
M3Q_1766	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_1783	PWY-5506	methanol oxidation to formaldehyde IV
M3Q_1801	PWY-6823	molybdenum cofactor biosynthesis
M3Q_1801	PWY-6891	thiazole biosynthesis II (Bacillus)
M3Q_1801	PWY-6892	thiazole biosynthesis I (E. coli)
M3Q_1801	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
M3Q_1803	PWY-6936	seleno-amino acid biosynthesis
M3Q_1803	PWY-7274	D-cycloserine biosynthesis
M3Q_1816	PWY-5794	malonate degradation I (biotin-independent)
M3Q_1816	PWY-6060	malonate degradation II (biotin-dependent)
M3Q_1817	PWY-5796	malonate decarboxylase activation
M3Q_1819	PWY-4381	fatty acid biosynthesis initiation I
M3Q_1819	PWY-5743	3-hydroxypropanoate cycle
M3Q_1819	PWY-5744	glyoxylate assimilation
M3Q_1819	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_1819	PWY-6060	malonate degradation II (biotin-dependent)
M3Q_1819	PWY-6679	jadomycin biosynthesis
M3Q_1819	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_1820	PWY-6060	malonate degradation II (biotin-dependent)
M3Q_1821	PWY-5796	malonate decarboxylase activation
M3Q_1822	PWY-4381	fatty acid biosynthesis initiation I
M3Q_1822	PWY-6799	fatty acid biosynthesis (plant mitochondria)
M3Q_1822	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_1840	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_1840	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_185	PWY-2941	L-lysine biosynthesis II
M3Q_185	PWY-2942	L-lysine biosynthesis III
M3Q_185	PWY-5097	L-lysine biosynthesis VI
M3Q_1850	PWY-6012	acyl carrier protein metabolism I
M3Q_1850	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
M3Q_1906	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
M3Q_1908	PWY-6938	NADH repair
M3Q_1916	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
M3Q_1916	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
M3Q_1917	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M3Q_1917	PWY-5723	Rubisco shunt
M3Q_1917	PWY-6891	thiazole biosynthesis II (Bacillus)
M3Q_1917	PWY-6892	thiazole biosynthesis I (E. coli)
M3Q_1917	PWY-6901	superpathway of glucose and xylose degradation
M3Q_1917	PWY-7560	methylerythritol phosphate pathway II
M3Q_192	PWY-1622	formaldehyde assimilation I (serine pathway)
M3Q_192	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
M3Q_192	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_192	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_192	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
M3Q_192	PWY-6549	L-glutamine biosynthesis III
M3Q_192	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M3Q_192	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M3Q_192	PWY-7124	ethylene biosynthesis V (engineered)
M3Q_1925	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
M3Q_1925	PWY-6853	ethylene biosynthesis II (microbes)
M3Q_1925	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
M3Q_1942	PWY-1042	glycolysis IV (plant cytosol)
M3Q_1942	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_1942	PWY-6886	1-butanol autotrophic biosynthesis
M3Q_1942	PWY-6901	superpathway of glucose and xylose degradation
M3Q_1942	PWY-7003	glycerol degradation to butanol
M3Q_1944	PWY-1042	glycolysis IV (plant cytosol)
M3Q_1944	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M3Q_1944	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_1944	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_1944	PWY-7385	1,3-propanediol biosynthesis (engineered)
M3Q_1956	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
M3Q_1956	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
M3Q_1970	PWY-7205	CMP phosphorylation
M3Q_1974	PWY-5686	UMP biosynthesis
M3Q_1979	PWY-6728	methylaspartate cycle
M3Q_1979	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_1979	PWY-7118	chitin degradation to ethanol
M3Q_1979	PWY-7294	xylose degradation IV
M3Q_1979	PWY-7295	L-arabinose degradation IV
M3Q_2011	PWY-6823	molybdenum cofactor biosynthesis
M3Q_2011	PWY-6891	thiazole biosynthesis II (Bacillus)
M3Q_2011	PWY-6892	thiazole biosynthesis I (E. coli)
M3Q_2011	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
M3Q_2038	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
M3Q_2038	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
M3Q_2038	PWY-6269	adenosylcobalamin salvage from cobinamide II
M3Q_2039	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
M3Q_2039	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
M3Q_2039	PWY-6269	adenosylcobalamin salvage from cobinamide II
M3Q_2042	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
M3Q_2042	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
M3Q_2042	PWY-6269	adenosylcobalamin salvage from cobinamide II
M3Q_2043	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
M3Q_2043	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
M3Q_2043	PWY-6164	3-dehydroquinate biosynthesis I
M3Q_2061	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
M3Q_2081	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M3Q_2085	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
M3Q_2085	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
M3Q_2085	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
M3Q_2089	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
M3Q_2089	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
M3Q_2090	PWY-6389	(<i>S</i>)-acetoin biosynthesis
M3Q_211	PWY-6123	inosine-5'-phosphate biosynthesis I
M3Q_211	PWY-7234	inosine-5'-phosphate biosynthesis III
M3Q_2113	PWY-5392	reductive TCA cycle II
M3Q_2113	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
M3Q_2113	PWY-5690	TCA cycle II (plants and fungi)
M3Q_2113	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_2113	PWY-6728	methylaspartate cycle
M3Q_2113	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_2113	PWY-7254	TCA cycle VII (acetate-producers)
M3Q_2113	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
M3Q_2137	PWY-2421	indole-3-acetate degradation VIII (bacterial)
M3Q_2137	PWY-5648	2-nitrobenzoate degradation II
M3Q_2137	PWY-6079	anthranilate degradation I (aerobic)
M3Q_2138	PWY-2421	indole-3-acetate degradation VIII (bacterial)
M3Q_2138	PWY-5648	2-nitrobenzoate degradation II
M3Q_2138	PWY-6079	anthranilate degradation I (aerobic)
M3Q_2143	PWY-5901	2,3-dihydroxybenzoate biosynthesis
M3Q_2144	PWY-5901	2,3-dihydroxybenzoate biosynthesis
M3Q_2149	PWY-6420	pyrroloquinoline quinone biosynthesis
M3Q_2151	PWY-6823	molybdenum cofactor biosynthesis
M3Q_2152	PWY-7533	gliotoxin biosynthesis
M3Q_2159	PWY-5506	methanol oxidation to formaldehyde IV
M3Q_2161	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
M3Q_2161	PWY-3162	L-tryptophan degradation V (side chain pathway)
M3Q_2161	PWY-5057	L-valine degradation II
M3Q_2161	PWY-5076	L-leucine degradation III
M3Q_2161	PWY-5078	L-isoleucine degradation II
M3Q_2161	PWY-5079	L-phenylalanine degradation III
M3Q_2161	PWY-5082	L-methionine degradation III
M3Q_2161	PWY-5480	pyruvate fermentation to ethanol I
M3Q_2161	PWY-5486	pyruvate fermentation to ethanol II
M3Q_2161	PWY-5751	phenylethanol biosynthesis
M3Q_2161	PWY-6028	acetoin degradation
M3Q_2161	PWY-6313	serotonin degradation
M3Q_2161	PWY-6333	acetaldehyde biosynthesis I
M3Q_2161	PWY-6342	noradrenaline and adrenaline degradation
M3Q_2161	PWY-6587	pyruvate fermentation to ethanol III
M3Q_2161	PWY-6802	salidroside biosynthesis
M3Q_2161	PWY-6871	3-methylbutanol biosynthesis
M3Q_2161	PWY-7013	L-1,2-propanediol degradation
M3Q_2161	PWY-7111	pyruvate fermentation to isobutanol (engineered)
M3Q_2161	PWY-7118	chitin degradation to ethanol
M3Q_2161	PWY-7396	butanol and isobutanol biosynthesis (engineered)
M3Q_2161	PWY-7557	dehydrodiconiferyl alcohol degradation
M3Q_2198	PWY-5381	pyridine nucleotide cycling (plants)
M3Q_2198	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M3Q_2198	PWY-6348	phosphate acquisition
M3Q_2198	PWY-6357	phosphate utilization in cell wall regeneration
M3Q_2198	PWY-6596	adenosine nucleotides degradation I
M3Q_2198	PWY-6606	guanosine nucleotides degradation II
M3Q_2198	PWY-6607	guanosine nucleotides degradation I
M3Q_2198	PWY-6608	guanosine nucleotides degradation III
M3Q_2198	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
M3Q_2198	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
M3Q_2198	PWY-7185	UTP and CTP dephosphorylation I
M3Q_2205	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
M3Q_2218	PWY-2201	folate transformations I
M3Q_2218	PWY-3841	folate transformations II
M3Q_2220	PWY-5381	pyridine nucleotide cycling (plants)
M3Q_2237	PWY-5101	L-isoleucine biosynthesis II
M3Q_2237	PWY-5103	L-isoleucine biosynthesis III
M3Q_2237	PWY-5104	L-isoleucine biosynthesis IV
M3Q_2237	PWY-7111	pyruvate fermentation to isobutanol (engineered)
M3Q_2266	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
M3Q_2282	PWY-5451	acetone degradation I (to methylglyoxal)
M3Q_2282	PWY-6588	pyruvate fermentation to acetone
M3Q_2282	PWY-6876	isopropanol biosynthesis
M3Q_2282	PWY-7466	acetone degradation III (to propane-1,2-diol)
M3Q_2283	PWY-5506	methanol oxidation to formaldehyde IV
M3Q_2285	PWY-5451	acetone degradation I (to methylglyoxal)
M3Q_2285	PWY-6588	pyruvate fermentation to acetone
M3Q_2285	PWY-6876	isopropanol biosynthesis
M3Q_2285	PWY-7466	acetone degradation III (to propane-1,2-diol)
M3Q_23	PWY-6899	base-degraded thiamin salvage
M3Q_23	PWY-7356	thiamin salvage IV (yeast)
M3Q_2300	PWY-5101	L-isoleucine biosynthesis II
M3Q_2300	PWY-5103	L-isoleucine biosynthesis III
M3Q_2300	PWY-5104	L-isoleucine biosynthesis IV
M3Q_2300	PWY-7111	pyruvate fermentation to isobutanol (engineered)
M3Q_2305	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
M3Q_2309	PWY-1361	benzoyl-CoA degradation I (aerobic)
M3Q_2309	PWY-2361	3-oxoadipate degradation
M3Q_2309	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
M3Q_231	PWY-6599	guanine and guanosine salvage II
M3Q_231	PWY-6609	adenine and adenosine salvage III
M3Q_231	PWY-6610	adenine and adenosine salvage IV
M3Q_231	PWY-6620	guanine and guanosine salvage
M3Q_2310	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
M3Q_2314	PWY-5751	phenylethanol biosynthesis
M3Q_2324	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
M3Q_233	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_233	PWY-6606	guanosine nucleotides degradation II
M3Q_233	PWY-6608	guanosine nucleotides degradation III
M3Q_233	PWY-7442	drosopterin and aurodrosopterin biosynthesis
M3Q_2341	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M3Q_2341	PWY-6416	quinate degradation II
M3Q_2341	PWY-6707	gallate biosynthesis
M3Q_2347	PWY-6123	inosine-5'-phosphate biosynthesis I
M3Q_2347	PWY-6124	inosine-5'-phosphate biosynthesis II
M3Q_2347	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_2347	PWY-7234	inosine-5'-phosphate biosynthesis III
M3Q_2348	PWY-1361	benzoyl-CoA degradation I (aerobic)
M3Q_2348	PWY-2361	3-oxoadipate degradation
M3Q_2348	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
M3Q_2351	PWY-7560	methylerythritol phosphate pathway II
M3Q_2354	PWY-1042	glycolysis IV (plant cytosol)
M3Q_2354	PWY-1622	formaldehyde assimilation I (serine pathway)
M3Q_2354	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
M3Q_2354	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_2354	PWY-5723	Rubisco shunt
M3Q_2354	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_2354	PWY-6886	1-butanol autotrophic biosynthesis
M3Q_2354	PWY-6901	superpathway of glucose and xylose degradation
M3Q_2354	PWY-7003	glycerol degradation to butanol
M3Q_2354	PWY-7124	ethylene biosynthesis V (engineered)
M3Q_2354	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
M3Q_2355	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
M3Q_2355	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
M3Q_2356	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
M3Q_2356	PWY-7177	UTP and CTP dephosphorylation II
M3Q_2356	PWY-7185	UTP and CTP dephosphorylation I
M3Q_2365	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
M3Q_2365	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
M3Q_2365	PWY-6164	3-dehydroquinate biosynthesis I
M3Q_2370	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_2370	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M3Q_2373	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M3Q_2373	PWY-5723	Rubisco shunt
M3Q_2377	PWY-6803	phosphatidylcholine acyl editing
M3Q_2377	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
M3Q_2377	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
M3Q_2377	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
M3Q_2386	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
M3Q_2410	PWY-7310	D-glucosaminate degradation
M3Q_2417	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
M3Q_2423	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
M3Q_2423	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
M3Q_2435	PWY-5971	palmitate biosynthesis II (bacteria and plants)
M3Q_2435	PWY-5973	<i>cis</i>-vaccenate biosynthesis
M3Q_2435	PWY-5989	stearate biosynthesis II (bacteria and plants)
M3Q_2435	PWY-5994	palmitate biosynthesis I (animals and fungi)
M3Q_2435	PWY-6113	superpathway of mycolate biosynthesis
M3Q_2435	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
M3Q_2435	PWY-6519	8-amino-7-oxononanoate biosynthesis I
M3Q_2435	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_2435	PWYG-321	mycolate biosynthesis
M3Q_2440	PWY-7560	methylerythritol phosphate pathway II
M3Q_2449	PWY-4981	L-proline biosynthesis II (from arginine)
M3Q_2449	PWY-4984	urea cycle
M3Q_2449	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M3Q_2451	PWY-7560	methylerythritol phosphate pathway II
M3Q_2457	PWY-5392	reductive TCA cycle II
M3Q_2457	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
M3Q_2457	PWY-5690	TCA cycle II (plants and fungi)
M3Q_2457	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_2457	PWY-6728	methylaspartate cycle
M3Q_2457	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_2457	PWY-7254	TCA cycle VII (acetate-producers)
M3Q_2457	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
M3Q_2458	PWY-3821	galactose degradation III
M3Q_2458	PWY-6317	galactose degradation I (Leloir pathway)
M3Q_2458	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
M3Q_2458	PWY-6527	stachyose degradation
M3Q_2458	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
M3Q_2458	PWY-7344	UDP-D-galactose biosynthesis
M3Q_2466	PWY-6823	molybdenum cofactor biosynthesis
M3Q_2468	PWY-6823	molybdenum cofactor biosynthesis
M3Q_2470	PWY-6823	molybdenum cofactor biosynthesis
M3Q_2475	PWY-6683	sulfate reduction III (assimilatory)
M3Q_2481	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M3Q_2481	PWY-6416	quinate degradation II
M3Q_2481	PWY-6707	gallate biosynthesis
M3Q_2492	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_2492	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_2508	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M3Q_2508	PWY-5723	Rubisco shunt
M3Q_253	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
M3Q_253	PWY-6167	flavin biosynthesis II (archaea)
M3Q_253	PWY-6168	flavin biosynthesis III (fungi)
M3Q_2536	PWY-3461	L-tyrosine biosynthesis II
M3Q_2536	PWY-3462	L-phenylalanine biosynthesis II
M3Q_2536	PWY-6120	L-tyrosine biosynthesis III
M3Q_2536	PWY-6627	salinosporamide A biosynthesis
M3Q_2543	PWY-6897	thiamin salvage II
M3Q_2543	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
M3Q_2543	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
M3Q_2555	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
M3Q_2562	PWY-2781	<i>cis</i>-zeatin biosynthesis
M3Q_2577	PWY-5747	2-methylcitrate cycle II
M3Q_2584	PWY-381	nitrate reduction II (assimilatory)
M3Q_2584	PWY-5675	nitrate reduction V (assimilatory)
M3Q_2584	PWY-6549	L-glutamine biosynthesis III
M3Q_2584	PWY-6963	ammonia assimilation cycle I
M3Q_2584	PWY-6964	ammonia assimilation cycle II
M3Q_2590	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M3Q_2590	PWY-6148	tetrahydromethanopterin biosynthesis
M3Q_2590	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
M3Q_2590	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
M3Q_2591	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M3Q_2591	PWY-6148	tetrahydromethanopterin biosynthesis
M3Q_2591	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
M3Q_2591	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
M3Q_2614	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_2617	PWY-3781	aerobic respiration I (cytochrome c)
M3Q_2617	PWY-4521	arsenite oxidation I (respiratory)
M3Q_2617	PWY-6692	Fe(II) oxidation
M3Q_2617	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
M3Q_2617	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
M3Q_262	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_2625	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M3Q_2636	PWY-6123	inosine-5'-phosphate biosynthesis I
M3Q_2636	PWY-6124	inosine-5'-phosphate biosynthesis II
M3Q_2636	PWY-7234	inosine-5'-phosphate biosynthesis III
M3Q_2637	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M3Q_2637	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
M3Q_2637	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
M3Q_2641	PWY-5386	methylglyoxal degradation I
M3Q_2660	PWY-6614	tetrahydrofolate biosynthesis
M3Q_267	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
M3Q_267	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
M3Q_267	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
M3Q_267	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
M3Q_267	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
M3Q_267	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
M3Q_267	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
M3Q_267	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
M3Q_267	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
M3Q_267	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
M3Q_2671	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_2671	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_2677	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_2677	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
M3Q_2677	PWY-6638	sulfolactate degradation III
M3Q_2677	PWY-6642	(<i>R</i>)-cysteate degradation
M3Q_2677	PWY-6643	coenzyme M biosynthesis II
M3Q_2677	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M3Q_2677	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M3Q_2677	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M3Q_2705	PWY-5642	2,4-dinitrotoluene degradation
M3Q_2705	PWY-6373	acrylate degradation
M3Q_2719	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M3Q_2719	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
M3Q_2719	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
M3Q_2719	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
M3Q_2721	PWY-5686	UMP biosynthesis
M3Q_2725	PWY-5667	CDP-diacylglycerol biosynthesis I
M3Q_2725	PWY-5981	CDP-diacylglycerol biosynthesis III
M3Q_2734	PWY-6891	thiazole biosynthesis II (Bacillus)
M3Q_2734	PWY-6892	thiazole biosynthesis I (E. coli)
M3Q_2741	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M3Q_2742	PWY-3461	L-tyrosine biosynthesis II
M3Q_2742	PWY-3462	L-phenylalanine biosynthesis II
M3Q_2742	PWY-6120	L-tyrosine biosynthesis III
M3Q_2742	PWY-6627	salinosporamide A biosynthesis
M3Q_2742	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
M3Q_2748	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
M3Q_2748	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
M3Q_2748	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
M3Q_2749	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M3Q_2749	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
M3Q_2749	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M3Q_2749	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M3Q_2751	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
M3Q_2751	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
M3Q_2751	PWY-6897	thiamin salvage II
M3Q_2751	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
M3Q_2751	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
M3Q_2751	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
M3Q_2751	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
M3Q_276	PWY-5316	nicotine biosynthesis
M3Q_276	PWY-5381	pyridine nucleotide cycling (plants)
M3Q_276	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
M3Q_276	PWY-7342	superpathway of nicotine biosynthesis
M3Q_2773	PWY-1622	formaldehyde assimilation I (serine pathway)
M3Q_2773	PWY-181	photorespiration
M3Q_2773	PWY-2161	folate polyglutamylation
M3Q_2773	PWY-2201	folate transformations I
M3Q_2773	PWY-3661	glycine betaine degradation I
M3Q_2773	PWY-3661-1	glycine betaine degradation II (mammalian)
M3Q_2773	PWY-3841	folate transformations II
M3Q_2773	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_2775	PWY-6857	retinol biosynthesis
M3Q_2780	PWY-6700	queuosine biosynthesis
M3Q_2798	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
M3Q_2798	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
M3Q_2798	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
M3Q_2802	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
M3Q_2803	PWY-2201	folate transformations I
M3Q_2803	PWY-3841	folate transformations II
M3Q_2806	PWY-1281	sulfoacetaldehyde degradation I
M3Q_2806	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
M3Q_2806	PWY-5482	pyruvate fermentation to acetate II
M3Q_2806	PWY-5485	pyruvate fermentation to acetate IV
M3Q_2806	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_2806	PWY-6637	sulfolactate degradation II
M3Q_2806	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M3Q_2809	PWY-5663	tetrahydrobiopterin biosynthesis I
M3Q_2809	PWY-5664	tetrahydrobiopterin biosynthesis II
M3Q_2809	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M3Q_2809	PWY-6703	preQ<sub>0</sub> biosynthesis
M3Q_2809	PWY-6983	tetrahydrobiopterin biosynthesis III
M3Q_2809	PWY-7442	drosopterin and aurodrosopterin biosynthesis
M3Q_2810	PWY-6854	ethylene biosynthesis III (microbes)
M3Q_2815	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
M3Q_2815	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
M3Q_2815	PWY-6148	tetrahydromethanopterin biosynthesis
M3Q_2816	PWY-381	nitrate reduction II (assimilatory)
M3Q_2816	PWY-5675	nitrate reduction V (assimilatory)
M3Q_2816	PWY-6549	L-glutamine biosynthesis III
M3Q_2816	PWY-6963	ammonia assimilation cycle I
M3Q_2816	PWY-6964	ammonia assimilation cycle II
M3Q_2819	PWY-5958	acridone alkaloid biosynthesis
M3Q_2819	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
M3Q_2819	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
M3Q_2826	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_2826	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M3Q_2826	PWY-6538	caffeine degradation III (bacteria, via demethylation)
M3Q_2826	PWY-6596	adenosine nucleotides degradation I
M3Q_2826	PWY-6606	guanosine nucleotides degradation II
M3Q_2826	PWY-6607	guanosine nucleotides degradation I
M3Q_2826	PWY-6608	guanosine nucleotides degradation III
M3Q_2826	PWY-6999	theophylline degradation
M3Q_2827	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_2827	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M3Q_2827	PWY-6538	caffeine degradation III (bacteria, via demethylation)
M3Q_2827	PWY-6596	adenosine nucleotides degradation I
M3Q_2827	PWY-6606	guanosine nucleotides degradation II
M3Q_2827	PWY-6607	guanosine nucleotides degradation I
M3Q_2827	PWY-6608	guanosine nucleotides degradation III
M3Q_2827	PWY-6999	theophylline degradation
M3Q_2828	PWY-5663	tetrahydrobiopterin biosynthesis I
M3Q_2828	PWY-5664	tetrahydrobiopterin biosynthesis II
M3Q_2828	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M3Q_2828	PWY-6703	preQ<sub>0</sub> biosynthesis
M3Q_2828	PWY-6983	tetrahydrobiopterin biosynthesis III
M3Q_2828	PWY-7442	drosopterin and aurodrosopterin biosynthesis
M3Q_2835	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
M3Q_2835	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
M3Q_2837	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
M3Q_2837	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
M3Q_2837	PWY-5901	2,3-dihydroxybenzoate biosynthesis
M3Q_2837	PWY-6406	salicylate biosynthesis I
M3Q_2838	PWY-6012	acyl carrier protein metabolism I
M3Q_2838	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
M3Q_2843	PWY-6173	histamine biosynthesis
M3Q_2844	PWY-5901	2,3-dihydroxybenzoate biosynthesis
M3Q_285	PWY-3221	dTDP-L-rhamnose biosynthesis II
M3Q_285	PWY-6808	dTDP-D-forosamine biosynthesis
M3Q_285	PWY-6942	dTDP-D-desosamine biosynthesis
M3Q_285	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
M3Q_285	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
M3Q_285	PWY-6974	dTDP-L-olivose biosynthesis
M3Q_285	PWY-6976	dTDP-L-mycarose biosynthesis
M3Q_285	PWY-7104	dTDP-L-megosamine biosynthesis
M3Q_285	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
M3Q_285	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
M3Q_285	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
M3Q_285	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
M3Q_285	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
M3Q_285	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
M3Q_285	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
M3Q_285	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
M3Q_286	PWY-3221	dTDP-L-rhamnose biosynthesis II
M3Q_286	PWY-6808	dTDP-D-forosamine biosynthesis
M3Q_286	PWY-6942	dTDP-D-desosamine biosynthesis
M3Q_286	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
M3Q_286	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
M3Q_286	PWY-6974	dTDP-L-olivose biosynthesis
M3Q_286	PWY-6976	dTDP-L-mycarose biosynthesis
M3Q_286	PWY-7104	dTDP-L-megosamine biosynthesis
M3Q_286	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
M3Q_286	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
M3Q_286	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
M3Q_286	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
M3Q_286	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
M3Q_286	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
M3Q_286	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
M3Q_286	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
M3Q_2882	PWY-5642	2,4-dinitrotoluene degradation
M3Q_2882	PWY-6373	acrylate degradation
M3Q_2883	PWY-5692	allantoin degradation to glyoxylate II
M3Q_2883	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
M3Q_2939	PWY-5386	methylglyoxal degradation I
M3Q_2944	PWY-5381	pyridine nucleotide cycling (plants)
M3Q_2944	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M3Q_2944	PWY-6596	adenosine nucleotides degradation I
M3Q_2944	PWY-6606	guanosine nucleotides degradation II
M3Q_2944	PWY-6607	guanosine nucleotides degradation I
M3Q_2944	PWY-6608	guanosine nucleotides degradation III
M3Q_2944	PWY-7185	UTP and CTP dephosphorylation I
M3Q_2947	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M3Q_2947	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M3Q_2952	PWY-6123	inosine-5'-phosphate biosynthesis I
M3Q_2952	PWY-6124	inosine-5'-phosphate biosynthesis II
M3Q_2952	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_2952	PWY-7234	inosine-5'-phosphate biosynthesis III
M3Q_2965	PWY-6409	pyoverdine I biosynthesis
M3Q_2965	PWY-6562	norspermidine biosynthesis
M3Q_2965	PWY-761	rhizobactin 1021 biosynthesis
M3Q_2976	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
M3Q_2977	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
M3Q_2977	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
M3Q_2977	PWY-6897	thiamin salvage II
M3Q_2977	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
M3Q_2977	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
M3Q_2977	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
M3Q_2977	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
M3Q_298	PWY-3801	sucrose degradation II (sucrose synthase)
M3Q_298	PWY-6527	stachyose degradation
M3Q_298	PWY-6981	chitin biosynthesis
M3Q_298	PWY-7238	sucrose biosynthesis II
M3Q_298	PWY-7343	UDP-glucose biosynthesis
M3Q_2989	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_2989	PWY-6549	L-glutamine biosynthesis III
M3Q_2989	PWY-6728	methylaspartate cycle
M3Q_2989	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_2989	PWY-7124	ethylene biosynthesis V (engineered)
M3Q_2989	PWY-7254	TCA cycle VII (acetate-producers)
M3Q_2989	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
M3Q_299	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
M3Q_2991	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_2991	PWY-6549	L-glutamine biosynthesis III
M3Q_2991	PWY-6728	methylaspartate cycle
M3Q_2991	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_2991	PWY-7124	ethylene biosynthesis V (engineered)
M3Q_2991	PWY-7254	TCA cycle VII (acetate-producers)
M3Q_2991	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
M3Q_300	PWY-3801	sucrose degradation II (sucrose synthase)
M3Q_300	PWY-5054	sorbitol biosynthesis I
M3Q_300	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
M3Q_300	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
M3Q_300	PWY-5659	GDP-mannose biosynthesis
M3Q_300	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_300	PWY-621	sucrose degradation III (sucrose invertase)
M3Q_300	PWY-622	starch biosynthesis
M3Q_300	PWY-6531	mannitol cycle
M3Q_300	PWY-6981	chitin biosynthesis
M3Q_300	PWY-7238	sucrose biosynthesis II
M3Q_300	PWY-7347	sucrose biosynthesis III
M3Q_300	PWY-7385	1,3-propanediol biosynthesis (engineered)
M3Q_3002	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
M3Q_3005	PWY-723	alkylnitronates degradation
M3Q_301	PWY-3821	galactose degradation III
M3Q_301	PWY-6317	galactose degradation I (Leloir pathway)
M3Q_301	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
M3Q_301	PWY-6527	stachyose degradation
M3Q_301	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
M3Q_301	PWY-7344	UDP-D-galactose biosynthesis
M3Q_3013	PWY-1042	glycolysis IV (plant cytosol)
M3Q_3013	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_3013	PWY-6901	superpathway of glucose and xylose degradation
M3Q_3013	PWY-7003	glycerol degradation to butanol
M3Q_3021	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
M3Q_303	PWY-6749	CMP-legionaminate biosynthesis I
M3Q_3036	PWY-5316	nicotine biosynthesis
M3Q_3036	PWY-7342	superpathway of nicotine biosynthesis
M3Q_3038	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M3Q_3038	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_3038	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_3038	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
M3Q_3038	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M3Q_3038	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M3Q_3040	PWY-6543	4-aminobenzoate biosynthesis
M3Q_3040	PWY-6722	candicidin biosynthesis
M3Q_3049	PWY-6703	preQ<sub>0</sub> biosynthesis
M3Q_3050	PWY-6703	preQ<sub>0</sub> biosynthesis
M3Q_3052	PWY-6482	diphthamide biosynthesis (archaea)
M3Q_3052	PWY-7546	diphthamide biosynthesis (eukaryotes)
M3Q_3057	PWY-5663	tetrahydrobiopterin biosynthesis I
M3Q_3057	PWY-5664	tetrahydrobiopterin biosynthesis II
M3Q_3057	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M3Q_3057	PWY-6703	preQ<sub>0</sub> biosynthesis
M3Q_3057	PWY-6983	tetrahydrobiopterin biosynthesis III
M3Q_3057	PWY-7442	drosopterin and aurodrosopterin biosynthesis
M3Q_3060	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M3Q_3060	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
M3Q_3060	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
M3Q_307	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_307	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_307	PWY-6454	vancomycin resistance I
M3Q_307	PWY-6901	superpathway of glucose and xylose degradation
M3Q_3072	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_308	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_308	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
M3Q_308	PWY-6638	sulfolactate degradation III
M3Q_308	PWY-6642	(<i>R</i>)-cysteate degradation
M3Q_308	PWY-6643	coenzyme M biosynthesis II
M3Q_308	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M3Q_308	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M3Q_308	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M3Q_3081	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M3Q_3081	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
M3Q_3081	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
M3Q_3082	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
M3Q_3082	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
M3Q_310	PWY-5747	2-methylcitrate cycle II
M3Q_3107	PWY-2941	L-lysine biosynthesis II
M3Q_3107	PWY-5097	L-lysine biosynthesis VI
M3Q_3108	PWY-2941	L-lysine biosynthesis II
M3Q_3108	PWY-2942	L-lysine biosynthesis III
M3Q_3108	PWY-5097	L-lysine biosynthesis VI
M3Q_3127	PWY-2582	brassinosteroid biosynthesis II
M3Q_3127	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
M3Q_3127	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
M3Q_3127	PWY-6948	sitosterol degradation to androstenedione
M3Q_3127	PWY-699	brassinosteroid biosynthesis I
M3Q_3127	PWY-7299	progesterone biosynthesis
M3Q_3138	PWY-7039	phosphatidate metabolism, as a signaling molecule
M3Q_3143	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
M3Q_3143	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
M3Q_3143	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
M3Q_3144	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M3Q_3145	PWY-4261	glycerol degradation I
M3Q_3145	PWY-6118	glycerol-3-phosphate shuttle
M3Q_3145	PWY-6952	glycerophosphodiester degradation
M3Q_3146	PWY-4261	glycerol degradation I
M3Q_3150	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
M3Q_3150	PWY-2201	folate transformations I
M3Q_3150	PWY-3841	folate transformations II
M3Q_3150	PWY-5030	L-histidine degradation III
M3Q_3150	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_3150	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
M3Q_3154	PWY-6614	tetrahydrofolate biosynthesis
M3Q_3160	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_3160	PWY-5686	UMP biosynthesis
M3Q_3160	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M3Q_3161	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_3161	PWY-5686	UMP biosynthesis
M3Q_3161	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M3Q_3184	PWY-5392	reductive TCA cycle II
M3Q_3184	PWY-5537	pyruvate fermentation to acetate V
M3Q_3184	PWY-5538	pyruvate fermentation to acetate VI
M3Q_3184	PWY-5690	TCA cycle II (plants and fungi)
M3Q_3184	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_3184	PWY-6728	methylaspartate cycle
M3Q_3184	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_3184	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
M3Q_3185	PWY-5392	reductive TCA cycle II
M3Q_3185	PWY-5537	pyruvate fermentation to acetate V
M3Q_3185	PWY-5538	pyruvate fermentation to acetate VI
M3Q_3185	PWY-5690	TCA cycle II (plants and fungi)
M3Q_3185	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_3185	PWY-6728	methylaspartate cycle
M3Q_3185	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_3185	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
M3Q_3186	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
M3Q_3186	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
M3Q_3187	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
M3Q_3188	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
M3Q_3189	PWY-3781	aerobic respiration I (cytochrome c)
M3Q_3189	PWY-4302	aerobic respiration III (alternative oxidase pathway)
M3Q_3189	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
M3Q_3189	PWY-5690	TCA cycle II (plants and fungi)
M3Q_3189	PWY-6728	methylaspartate cycle
M3Q_3189	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_3189	PWY-7254	TCA cycle VII (acetate-producers)
M3Q_3189	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
M3Q_3190	PWY-3781	aerobic respiration I (cytochrome c)
M3Q_3190	PWY-4302	aerobic respiration III (alternative oxidase pathway)
M3Q_3190	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
M3Q_3190	PWY-5690	TCA cycle II (plants and fungi)
M3Q_3190	PWY-6728	methylaspartate cycle
M3Q_3190	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_3190	PWY-7254	TCA cycle VII (acetate-producers)
M3Q_3190	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
M3Q_3201	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
M3Q_3201	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
M3Q_3208	PWY-5194	siroheme biosynthesis
M3Q_3208	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
M3Q_3209	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
M3Q_3245	PWY-901	methylglyoxal degradation II
M3Q_3264	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
M3Q_330	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M3Q_3311	PWY-5392	reductive TCA cycle II
M3Q_3311	PWY-5537	pyruvate fermentation to acetate V
M3Q_3311	PWY-5538	pyruvate fermentation to acetate VI
M3Q_3311	PWY-5690	TCA cycle II (plants and fungi)
M3Q_3311	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_3311	PWY-6728	methylaspartate cycle
M3Q_3311	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_3311	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
M3Q_3312	PWY-5392	reductive TCA cycle II
M3Q_3312	PWY-5537	pyruvate fermentation to acetate V
M3Q_3312	PWY-5538	pyruvate fermentation to acetate VI
M3Q_3312	PWY-5690	TCA cycle II (plants and fungi)
M3Q_3312	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_3312	PWY-6728	methylaspartate cycle
M3Q_3312	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_3312	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
M3Q_3313	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
M3Q_3313	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
M3Q_3314	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
M3Q_3333	PWY-6683	sulfate reduction III (assimilatory)
M3Q_3339	PWY-1361	benzoyl-CoA degradation I (aerobic)
M3Q_3339	PWY-5109	2-methylbutanoate biosynthesis
M3Q_3339	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
M3Q_3339	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
M3Q_3339	PWY-5177	glutaryl-CoA degradation
M3Q_3339	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_3339	PWY-6435	4-hydroxybenzoate biosynthesis V
M3Q_3339	PWY-6583	pyruvate fermentation to butanol I
M3Q_3339	PWY-6863	pyruvate fermentation to hexanol
M3Q_3339	PWY-6883	pyruvate fermentation to butanol II
M3Q_3339	PWY-6944	androstenedione degradation
M3Q_3339	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
M3Q_3339	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
M3Q_3339	PWY-7007	methyl ketone biosynthesis
M3Q_3339	PWY-7046	4-coumarate degradation (anaerobic)
M3Q_3339	PWY-7094	fatty acid salvage
M3Q_3339	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
M3Q_3339	PWY-735	jasmonic acid biosynthesis
M3Q_3339	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
M3Q_335	PWY-5642	2,4-dinitrotoluene degradation
M3Q_335	PWY-6373	acrylate degradation
M3Q_3353	PWY-2161	folate polyglutamylation
M3Q_3354	PWY-4381	fatty acid biosynthesis initiation I
M3Q_3354	PWY-5743	3-hydroxypropanoate cycle
M3Q_3354	PWY-5744	glyoxylate assimilation
M3Q_3354	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_3354	PWY-6679	jadomycin biosynthesis
M3Q_3354	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_3363	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
M3Q_3363	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
M3Q_3363	PWY-6268	adenosylcobalamin salvage from cobalamin
M3Q_3363	PWY-6269	adenosylcobalamin salvage from cobinamide II
M3Q_3392	PWY-5057	L-valine degradation II
M3Q_3392	PWY-5076	L-leucine degradation III
M3Q_3392	PWY-5078	L-isoleucine degradation II
M3Q_3392	PWY-5101	L-isoleucine biosynthesis II
M3Q_3392	PWY-5103	L-isoleucine biosynthesis III
M3Q_3392	PWY-5104	L-isoleucine biosynthesis IV
M3Q_3392	PWY-5108	L-isoleucine biosynthesis V
M3Q_3395	PWY-6700	queuosine biosynthesis
M3Q_3398	PWY-6700	queuosine biosynthesis
M3Q_342	PWY-6157	autoinducer AI-1 biosynthesis
M3Q_3440	PWY-4381	fatty acid biosynthesis initiation I
M3Q_3440	PWY-5743	3-hydroxypropanoate cycle
M3Q_3440	PWY-5744	glyoxylate assimilation
M3Q_3440	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_3440	PWY-6679	jadomycin biosynthesis
M3Q_3440	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_3448	PWY-5669	phosphatidylethanolamine biosynthesis I
M3Q_3453	PWY-1622	formaldehyde assimilation I (serine pathway)
M3Q_3453	PWY-5392	reductive TCA cycle II
M3Q_3453	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
M3Q_3453	PWY-5690	TCA cycle II (plants and fungi)
M3Q_3453	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_3453	PWY-6728	methylaspartate cycle
M3Q_3453	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_3453	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M3Q_3453	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
M3Q_3463	PWY-6785	hydrogen production VIII
M3Q_3521	PWY-5667	CDP-diacylglycerol biosynthesis I
M3Q_3521	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
M3Q_353	PWY-6012	acyl carrier protein metabolism I
M3Q_353	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
M3Q_3536	PWY-6891	thiazole biosynthesis II (Bacillus)
M3Q_3536	PWY-6892	thiazole biosynthesis I (E. coli)
M3Q_3536	PWY-7560	methylerythritol phosphate pathway II
M3Q_3537	PWY-6168	flavin biosynthesis III (fungi)
M3Q_3537	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
M3Q_3538	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
M3Q_3538	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
M3Q_3539	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M3Q_3573	PWY-6854	ethylene biosynthesis III (microbes)
M3Q_3580	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_3580	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_3590	PWY-6829	tRNA methylation (yeast)
M3Q_3590	PWY-7285	methylwyosine biosynthesis
M3Q_3590	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
M3Q_3600	PWY-7560	methylerythritol phosphate pathway II
M3Q_3601	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_3617	PWY-6164	3-dehydroquinate biosynthesis I
M3Q_3618	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M3Q_3627	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M3Q_3627	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M3Q_3627	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M3Q_3628	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_3628	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_3635	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
M3Q_3645	PWY-6825	phosphatidylcholine biosynthesis V
M3Q_365	PWY-6012	acyl carrier protein metabolism I
M3Q_365	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
M3Q_3651	PWY-5344	L-homocysteine biosynthesis
M3Q_3651	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
M3Q_3653	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
M3Q_3653	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_3653	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M3Q_3653	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M3Q_3658	PWY-5344	L-homocysteine biosynthesis
M3Q_3658	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
M3Q_3660	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
M3Q_3660	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_3660	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
M3Q_3660	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
M3Q_3677	PWY-702	L-methionine biosynthesis II
M3Q_380	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_382	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_417	PWY-6123	inosine-5'-phosphate biosynthesis I
M3Q_417	PWY-6124	inosine-5'-phosphate biosynthesis II
M3Q_417	PWY-7234	inosine-5'-phosphate biosynthesis III
M3Q_419	PWY-2941	L-lysine biosynthesis II
M3Q_419	PWY-2942	L-lysine biosynthesis III
M3Q_419	PWY-5097	L-lysine biosynthesis VI
M3Q_44	PWY-6672	<i>cis</i>-genanyl-CoA degradation
M3Q_44	PWY-7118	chitin degradation to ethanol
M3Q_464	PWY-6614	tetrahydrofolate biosynthesis
M3Q_465	PWY-6749	CMP-legionaminate biosynthesis I
M3Q_491	PWY-6167	flavin biosynthesis II (archaea)
M3Q_491	PWY-6168	flavin biosynthesis III (fungi)
M3Q_491	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_495	PWY-5988	wound-induced proteolysis I
M3Q_495	PWY-6018	seed germination protein turnover
M3Q_498	PWY-1042	glycolysis IV (plant cytosol)
M3Q_498	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
M3Q_498	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_498	PWY-5723	Rubisco shunt
M3Q_498	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_498	PWY-6886	1-butanol autotrophic biosynthesis
M3Q_498	PWY-6901	superpathway of glucose and xylose degradation
M3Q_498	PWY-7003	glycerol degradation to butanol
M3Q_498	PWY-7124	ethylene biosynthesis V (engineered)
M3Q_498	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
M3Q_511	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_511	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_517	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
M3Q_524	PWY-4983	L-citrulline-nitric oxide cycle
M3Q_524	PWY-4984	urea cycle
M3Q_524	PWY-5	canavanine biosynthesis
M3Q_524	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_524	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M3Q_527	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
M3Q_527	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
M3Q_528	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
M3Q_528	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
M3Q_537	PWY-181	photorespiration
M3Q_538	PWY-5958	acridone alkaloid biosynthesis
M3Q_538	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
M3Q_538	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
M3Q_55	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
M3Q_55	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
M3Q_56	PWY-6749	CMP-legionaminate biosynthesis I
M3Q_565	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
M3Q_565	PWY-6435	4-hydroxybenzoate biosynthesis V
M3Q_565	PWY-6863	pyruvate fermentation to hexanol
M3Q_565	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
M3Q_565	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
M3Q_565	PWY-6948	sitosterol degradation to androstenedione
M3Q_565	PWY-7094	fatty acid salvage
M3Q_565	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
M3Q_565	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
M3Q_565	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
M3Q_565	PWY-7339	10-<i>trans</i>-heptadecenoyl-CoA degradation (MFE-dependent, yeast)
M3Q_565	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
M3Q_565	PWY-735	jasmonic acid biosynthesis
M3Q_566	PWY-1361	benzoyl-CoA degradation I (aerobic)
M3Q_566	PWY-5109	2-methylbutanoate biosynthesis
M3Q_566	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
M3Q_566	PWY-5137	fatty acid &beta;-oxidation III (unsaturated, odd number)
M3Q_566	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
M3Q_566	PWY-5177	glutaryl-CoA degradation
M3Q_566	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_566	PWY-6435	4-hydroxybenzoate biosynthesis V
M3Q_566	PWY-6583	pyruvate fermentation to butanol I
M3Q_566	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
M3Q_566	PWY-6863	pyruvate fermentation to hexanol
M3Q_566	PWY-6883	pyruvate fermentation to butanol II
M3Q_566	PWY-6944	androstenedione degradation
M3Q_566	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
M3Q_566	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
M3Q_566	PWY-7007	methyl ketone biosynthesis
M3Q_566	PWY-7046	4-coumarate degradation (anaerobic)
M3Q_566	PWY-7094	fatty acid salvage
M3Q_566	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
M3Q_566	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
M3Q_566	PWY-735	jasmonic acid biosynthesis
M3Q_566	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
M3Q_57	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
M3Q_57	PWY-6596	adenosine nucleotides degradation I
M3Q_57	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_572	PWY-5269	cardiolipin biosynthesis II
M3Q_572	PWY-5668	cardiolipin biosynthesis I
M3Q_590	PWY-1042	glycolysis IV (plant cytosol)
M3Q_590	PWY-5484	glycolysis II (from fructose 6-phosphate)
M3Q_590	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
M3Q_590	PWY-7003	glycerol degradation to butanol
M3Q_608	PWY-5839	menaquinol-7 biosynthesis
M3Q_608	PWY-5844	menaquinol-9 biosynthesis
M3Q_608	PWY-5849	menaquinol-6 biosynthesis
M3Q_608	PWY-5890	menaquinol-10 biosynthesis
M3Q_608	PWY-5891	menaquinol-11 biosynthesis
M3Q_608	PWY-5892	menaquinol-12 biosynthesis
M3Q_608	PWY-5895	menaquinol-13 biosynthesis
M3Q_634	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_634	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_64	PWY-6891	thiazole biosynthesis II (Bacillus)
M3Q_64	PWY-6892	thiazole biosynthesis I (E. coli)
M3Q_64	PWY-7560	methylerythritol phosphate pathway II
M3Q_641	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
M3Q_653	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
M3Q_653	PWY-5143	long-chain fatty acid activation
M3Q_653	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
M3Q_653	PWY-5885	wax esters biosynthesis II
M3Q_653	PWY-5972	stearate biosynthesis I (animals and fungi)
M3Q_653	PWY-5995	linoleate biosynthesis I (plants)
M3Q_653	PWY-6000	&gamma;-linolenate biosynthesis II (animals)
M3Q_653	PWY-6001	linoleate biosynthesis II (animals)
M3Q_653	PWY-6803	phosphatidylcholine acyl editing
M3Q_653	PWY-6873	long chain fatty acid ester synthesis for microdiesel production
M3Q_653	PWY-6920	6-gingerol analog biosynthesis
M3Q_653	PWY-6951	M3Q_653
M3Q_653	PWY-7033	alkane biosynthesis II
M3Q_653	PWY-7035	(<i>Z</i>)-9-tricosene biosynthesis
M3Q_653	PWY-7049	icosapentaenoate biosynthesis II (metazoa)
M3Q_653	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
M3Q_653	PWY-7094	fatty acid salvage
M3Q_653	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
M3Q_673	PWY-7396	butanol and isobutanol biosynthesis (engineered)
M3Q_682	PWY-2941	L-lysine biosynthesis II
M3Q_682	PWY-2942	L-lysine biosynthesis III
M3Q_682	PWY-5097	L-lysine biosynthesis VI
M3Q_682	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_682	PWY-6559	spermidine biosynthesis II
M3Q_682	PWY-6562	norspermidine biosynthesis
M3Q_682	PWY-7153	grixazone biosynthesis
M3Q_682	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
M3Q_7	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
M3Q_706	PWY-2201	folate transformations I
M3Q_706	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_71	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_71	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_712	PWY-3841	folate transformations II
M3Q_712	PWY-6614	tetrahydrofolate biosynthesis
M3Q_713	PWY-3841	folate transformations II
M3Q_713	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_713	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_713	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M3Q_713	PWY-7199	pyrimidine deoxyribonucleosides salvage
M3Q_713	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M3Q_72	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_72	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_724	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
M3Q_727	PWY-5344	L-homocysteine biosynthesis
M3Q_728	PWY-6871	3-methylbutanol biosynthesis
M3Q_73	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
M3Q_73	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
M3Q_73	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
M3Q_73	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
M3Q_736	PWY-5392	reductive TCA cycle II
M3Q_736	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
M3Q_736	PWY-5690	TCA cycle II (plants and fungi)
M3Q_736	PWY-5913	TCA cycle VI (obligate autotrophs)
M3Q_736	PWY-6728	methylaspartate cycle
M3Q_736	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
M3Q_736	PWY-7254	TCA cycle VII (acetate-producers)
M3Q_736	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
M3Q_737	PWY-1281	sulfoacetaldehyde degradation I
M3Q_737	PWY-5482	pyruvate fermentation to acetate II
M3Q_737	PWY-5485	pyruvate fermentation to acetate IV
M3Q_737	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_737	PWY-6637	sulfolactate degradation II
M3Q_738	PWY-5482	pyruvate fermentation to acetate II
M3Q_738	PWY-5485	pyruvate fermentation to acetate IV
M3Q_738	PWY-5497	purine nucleobases degradation II (anaerobic)
M3Q_739	PWY-5101	L-isoleucine biosynthesis II
M3Q_739	PWY-5103	L-isoleucine biosynthesis III
M3Q_739	PWY-5104	L-isoleucine biosynthesis IV
M3Q_739	PWY-7111	pyruvate fermentation to isobutanol (engineered)
M3Q_740	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
M3Q_740	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
M3Q_740	PWY-7242	D-fructuronate degradation
M3Q_740	PWY-7310	D-glucosaminate degradation
M3Q_742	PWY-5530	sorbitol biosynthesis II
M3Q_742	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
M3Q_747	PWY-6902	chitin degradation II
M3Q_752	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M3Q_752	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
M3Q_752	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_752	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_752	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
M3Q_752	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M3Q_752	PWY-7205	CMP phosphorylation
M3Q_752	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M3Q_752	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_752	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_752	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_752	PWY-7224	purine deoxyribonucleosides salvage
M3Q_752	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_752	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M3Q_756	PWY-7560	methylerythritol phosphate pathway II
M3Q_780	PWY-6012	acyl carrier protein metabolism I
M3Q_780	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
M3Q_787	PWY-5971	palmitate biosynthesis II (bacteria and plants)
M3Q_787	PWY-5973	<i>cis</i>-vaccenate biosynthesis
M3Q_787	PWY-5989	stearate biosynthesis II (bacteria and plants)
M3Q_787	PWY-6113	superpathway of mycolate biosynthesis
M3Q_787	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
M3Q_787	PWY-6519	8-amino-7-oxononanoate biosynthesis I
M3Q_787	PWY-7096	triclosan resistance
M3Q_787	PWYG-321	mycolate biosynthesis
M3Q_795	PWY-5101	L-isoleucine biosynthesis II
M3Q_795	PWY-5103	L-isoleucine biosynthesis III
M3Q_795	PWY-5104	L-isoleucine biosynthesis IV
M3Q_795	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
M3Q_795	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
M3Q_795	PWY-6389	(<i>S</i>)-acetoin biosynthesis
M3Q_795	PWY-7111	pyruvate fermentation to isobutanol (engineered)
M3Q_796	PWY-5101	L-isoleucine biosynthesis II
M3Q_796	PWY-5103	L-isoleucine biosynthesis III
M3Q_796	PWY-5104	L-isoleucine biosynthesis IV
M3Q_796	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
M3Q_796	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
M3Q_796	PWY-6389	(<i>S</i>)-acetoin biosynthesis
M3Q_796	PWY-7111	pyruvate fermentation to isobutanol (engineered)
M3Q_797	PWY-5101	L-isoleucine biosynthesis II
M3Q_797	PWY-5103	L-isoleucine biosynthesis III
M3Q_797	PWY-5104	L-isoleucine biosynthesis IV
M3Q_797	PWY-7111	pyruvate fermentation to isobutanol (engineered)
M3Q_80	PWY-5686	UMP biosynthesis
M3Q_824	PWY-6936	seleno-amino acid biosynthesis
M3Q_832	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
M3Q_832	PWY-6148	tetrahydromethanopterin biosynthesis
M3Q_832	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
M3Q_832	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
M3Q_833	PWY-6654	phosphopantothenate biosynthesis III
M3Q_853	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
M3Q_856	PWY-4381	fatty acid biosynthesis initiation I
M3Q_856	PWY-5743	3-hydroxypropanoate cycle
M3Q_856	PWY-5744	glyoxylate assimilation
M3Q_856	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
M3Q_856	PWY-6679	jadomycin biosynthesis
M3Q_856	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
M3Q_858	PWY-3341	L-proline biosynthesis III
M3Q_858	PWY-4981	L-proline biosynthesis II (from arginine)
M3Q_858	PWY-6344	L-ornithine degradation II (Stickland reaction)
M3Q_875	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
M3Q_875	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
M3Q_879	PWY-5958	acridone alkaloid biosynthesis
M3Q_879	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
M3Q_879	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
M3Q_892	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
M3Q_894	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
M3Q_894	PWY-5723	Rubisco shunt
M3Q_902	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
M3Q_903	PWY-5316	nicotine biosynthesis
M3Q_903	PWY-7342	superpathway of nicotine biosynthesis
M3Q_904	PWY-6609	adenine and adenosine salvage III
M3Q_904	PWY-6611	adenine and adenosine salvage V
M3Q_904	PWY-7179	purine deoxyribonucleosides degradation I
M3Q_904	PWY-7179-1	purine deoxyribonucleosides degradation
M3Q_92	PWY-5691	urate degradation to allantoin I
M3Q_92	PWY-7394	urate degradation to allantoin II
M3Q_923	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
M3Q_923	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
M3Q_923	PWY-6936	seleno-amino acid biosynthesis
M3Q_923	PWY-702	L-methionine biosynthesis II
M3Q_948	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M3Q_948	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_948	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M3Q_948	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M3Q_948	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_948	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_948	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_948	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M3Q_950	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
M3Q_950	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_950	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
M3Q_950	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
M3Q_950	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_950	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_950	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
M3Q_950	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
M3Q_96	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
M3Q_968	PWY-7183	pyrimidine nucleobases salvage I
M3Q_97	PWY-5694	allantoin degradation to glyoxylate I
M3Q_97	PWY-5705	allantoin degradation to glyoxylate III
M3Q_989	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
M3Q_998	PWY-3961	phosphopantothenate biosynthesis II
M3Q_999	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
M3Q_999	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
