APJL_0004 PWY-6854 ethylene biosynthesis III (microbes) APJL_0005 PWY-2941 L-lysine biosynthesis II APJL_0005 PWY-2942 L-lysine biosynthesis III APJL_0005 PWY-5097 L-lysine biosynthesis VI APJL_0005 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) APJL_0005 PWY-6559 spermidine biosynthesis II APJL_0005 PWY-6562 norspermidine biosynthesis APJL_0005 PWY-7153 grixazone biosynthesis APJL_0005 PWY-7400 L-arginine biosynthesis IV (archaebacteria) APJL_0015 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_0015 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_0016 PWY-5265 peptidoglycan biosynthesis II (staphylococci) APJL_0016 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) APJL_0016 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) APJL_0017 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_0017 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_0019 PWY-5265 peptidoglycan biosynthesis II (staphylococci) APJL_0019 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) APJL_0019 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) APJL_0019 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) APJL_0020 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_0020 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_0021 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_0021 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_0036 PWY-6825 phosphatidylcholine biosynthesis V APJL_0044 PWY-5269 cardiolipin biosynthesis II APJL_0044 PWY-5668 cardiolipin biosynthesis I APJL_0046 PWY-5523 5,6-dimethylbenzimidazole biosynthesis APJL_0046 PWY-6167 flavin biosynthesis II (archaea) APJL_0046 PWY-6168 flavin biosynthesis III (fungi) APJL_0051 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I APJL_0051 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) APJL_0052 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) APJL_0062 PWY-1861 formaldehyde assimilation II (RuMP Cycle) APJL_0062 PWY-5723 Rubisco shunt APJL_0072 PWY-5057 L-valine degradation II APJL_0072 PWY-5076 L-leucine degradation III APJL_0072 PWY-5078 L-isoleucine degradation II APJL_0072 PWY-5101 L-isoleucine biosynthesis II APJL_0072 PWY-5103 L-isoleucine biosynthesis III APJL_0072 PWY-5104 L-isoleucine biosynthesis IV APJL_0072 PWY-5108 L-isoleucine biosynthesis V APJL_0079 PWY-5350 thiosulfate disproportionation III (rhodanese) APJL_0085 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I APJL_0085 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) APJL_0087 PWY-5381 pyridine nucleotide cycling (plants) APJL_0097 PWY-5101 L-isoleucine biosynthesis II APJL_0097 PWY-5103 L-isoleucine biosynthesis III APJL_0097 PWY-5104 L-isoleucine biosynthesis IV APJL_0097 PWY-7111 pyruvate fermentation to isobutanol (engineered) APJL_0099 PWY-5101 L-isoleucine biosynthesis II APJL_0099 PWY-5103 L-isoleucine biosynthesis III APJL_0099 PWY-5104 L-isoleucine biosynthesis IV APJL_0099 PWY-5938 (R)-acetoin biosynthesis I APJL_0099 PWY-5939 (R)-acetoin biosynthesis II APJL_0099 PWY-6389 (S)-acetoin biosynthesis APJL_0099 PWY-7111 pyruvate fermentation to isobutanol (engineered) APJL_0100 PWY-5674 nitrate reduction IV (dissimilatory) APJL_0101 PWY-5674 nitrate reduction IV (dissimilatory) APJL_0107 PWY-5737 (5R)-carbapenem carboxylate biosynthesis APJL_0107 PWY-6853 ethylene biosynthesis II (microbes) APJL_0107 PWY-6922 L-Nδ-acetylornithine biosynthesis APJL_0113 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) APJL_0113 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) APJL_0116 PWY-3841 folate transformations II APJL_0116 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I APJL_0116 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II APJL_0116 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV APJL_0116 PWY-7199 pyrimidine deoxyribonucleosides salvage APJL_0116 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP APJL_0118 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II APJL_0137 PWY-7176 UTP and CTP de novo biosynthesis APJL_0137 PWY-7177 UTP and CTP dephosphorylation II APJL_0137 PWY-7185 UTP and CTP dephosphorylation I APJL_0148 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III APJL_0148 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I APJL_0148 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV APJL_0148 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP APJL_0148 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II APJL_0148 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II APJL_0148 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I APJL_0148 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis APJL_0149 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III APJL_0149 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I APJL_0149 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV APJL_0149 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP APJL_0149 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II APJL_0149 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II APJL_0149 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I APJL_0149 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis APJL_0161 PWY-3341 L-proline biosynthesis III APJL_0161 PWY-4981 L-proline biosynthesis II (from arginine) APJL_0161 PWY-6344 L-ornithine degradation II (Stickland reaction) APJL_0178 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I APJL_0178 PWY-6148 tetrahydromethanopterin biosynthesis APJL_0178 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) APJL_0178 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) APJL_0182 PWY-5386 methylglyoxal degradation I APJL_0185 PWY-3461 L-tyrosine biosynthesis II APJL_0185 PWY-3462 L-phenylalanine biosynthesis II APJL_0185 PWY-6120 L-tyrosine biosynthesis III APJL_0185 PWY-6627 salinosporamide A biosynthesis APJL_0185 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis APJL_0186 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I APJL_0186 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) APJL_0186 PWY-6164 3-dehydroquinate biosynthesis I APJL_0188 PWY-1042 glycolysis IV (plant cytosol) APJL_0188 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) APJL_0188 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_0188 PWY-5723 Rubisco shunt APJL_0188 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) APJL_0188 PWY-6886 1-butanol autotrophic biosynthesis APJL_0188 PWY-6901 superpathway of glucose and xylose degradation APJL_0188 PWY-7003 glycerol degradation to butanol APJL_0188 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) APJL_0188 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) APJL_0194 PWY-6164 3-dehydroquinate biosynthesis I APJL_0195 PWY-6163 chorismate biosynthesis from 3-dehydroquinate APJL_0203 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) APJL_0203 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) APJL_0203 PWY-6896 thiamin salvage I APJL_0203 PWY-6897 thiamin salvage II APJL_0204 PWY-5269 cardiolipin biosynthesis II APJL_0204 PWY-5668 cardiolipin biosynthesis I APJL_0207 PWY-2301 myo-inositol biosynthesis APJL_0207 PWY-4702 phytate degradation I APJL_0207 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation APJL_0208 PWY-6891 thiazole biosynthesis II (Bacillus) APJL_0208 PWY-6892 thiazole biosynthesis I (E. coli) APJL_0208 PWY-7560 methylerythritol phosphate pathway II APJL_0212 PWY-1622 formaldehyde assimilation I (serine pathway) APJL_0212 PWY-181 photorespiration APJL_0212 PWY-2161 folate polyglutamylation APJL_0212 PWY-2201 folate transformations I APJL_0212 PWY-3661 glycine betaine degradation I APJL_0212 PWY-3661-1 glycine betaine degradation II (mammalian) APJL_0212 PWY-3841 folate transformations II APJL_0212 PWY-5497 purine nucleobases degradation II (anaerobic) APJL_0213 PWY-5083 NAD/NADH phosphorylation and dephosphorylation APJL_0213 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) APJL_0213 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) APJL_0246 PWY-6502 oxidized GTP and dGTP detoxification APJL_0247 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) APJL_0247 PWY-7400 L-arginine biosynthesis IV (archaebacteria) APJL_0248 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) APJL_0248 PWY-7400 L-arginine biosynthesis IV (archaebacteria) APJL_0253 PWY-7219 adenosine ribonucleotides de novo biosynthesis APJL_0254 PWY-6936 seleno-amino acid biosynthesis APJL_0255 PWY-702 L-methionine biosynthesis II APJL_0259 PWY-6854 ethylene biosynthesis III (microbes) APJL_0260 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) APJL_0264 PWY-7221 guanosine ribonucleotides de novo biosynthesis APJL_0274 PWY-6605 adenine and adenosine salvage II APJL_0274 PWY-6610 adenine and adenosine salvage IV APJL_0285 PWY-5269 cardiolipin biosynthesis II APJL_0285 PWY-5668 cardiolipin biosynthesis I APJL_0296 PWY-5855 ubiquinol-7 biosynthesis (prokaryotic) APJL_0296 PWY-5856 ubiquinol-9 biosynthesis (prokaryotic) APJL_0296 PWY-5857 ubiquinol-10 biosynthesis (prokaryotic) APJL_0296 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) APJL_0296 PWY-5871 ubiquinol-9 biosynthesis (eukaryotic) APJL_0296 PWY-5872 ubiquinol-10 biosynthesis (eukaryotic) APJL_0296 PWY-5873 ubiquinol-7 biosynthesis (eukaryotic) APJL_0296 PWY-6708 ubiquinol-8 biosynthesis (prokaryotic) APJL_0296 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) APJL_0296 PWY-7233 ubiquinol-6 bypass biosynthesis (eukaryotic) APJL_0326 PWY-6823 molybdenum cofactor biosynthesis APJL_0333 PWY-5686 UMP biosynthesis APJL_0334 PWY-5041 S-adenosyl-L-methionine cycle II APJL_0334 PWY-6151 S-adenosyl-L-methionine cycle I APJL_0334 PWY-6936 seleno-amino acid biosynthesis APJL_0334 PWY-702 L-methionine biosynthesis II APJL_0335 PWY-6936 seleno-amino acid biosynthesis APJL_0343 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) APJL_0355 PWY-1622 formaldehyde assimilation I (serine pathway) APJL_0355 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type APJL_0355 PWY-5913 TCA cycle VI (obligate autotrophs) APJL_0355 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) APJL_0355 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism APJL_0355 PWY-6549 L-glutamine biosynthesis III APJL_0355 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type APJL_0355 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type APJL_0355 PWY-7124 ethylene biosynthesis V (engineered) APJL_0359 PWY-7310 D-glucosaminate degradation APJL_0362 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) APJL_0362 PWY-622 starch biosynthesis APJL_0364 PWY-622 starch biosynthesis APJL_0365 PWY-622 starch biosynthesis APJL_0366 PWY-5941 glycogen degradation II (eukaryotic) APJL_0366 PWY-622 starch biosynthesis APJL_0366 PWY-6731 starch degradation III APJL_0366 PWY-6737 starch degradation V APJL_0366 PWY-7238 sucrose biosynthesis II APJL_0367 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III APJL_0367 PWY-7176 UTP and CTP de novo biosynthesis APJL_0367 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I APJL_0367 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II APJL_0367 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation APJL_0367 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV APJL_0367 PWY-7205 CMP phosphorylation APJL_0367 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP APJL_0367 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II APJL_0367 PWY-7221 guanosine ribonucleotides de novo biosynthesis APJL_0367 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II APJL_0367 PWY-7224 purine deoxyribonucleosides salvage APJL_0367 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I APJL_0367 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis APJL_0369 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) APJL_0369 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I APJL_0393 PWY-4261 glycerol degradation I APJL_0398 PWY-4261 glycerol degradation I APJL_0398 PWY-6118 glycerol-3-phosphate shuttle APJL_0398 PWY-6952 glycerophosphodiester degradation APJL_0399 PWY-4261 glycerol degradation I APJL_0399 PWY-6118 glycerol-3-phosphate shuttle APJL_0399 PWY-6952 glycerophosphodiester degradation APJL_0403 PWY-6167 flavin biosynthesis II (archaea) APJL_0403 PWY-6168 flavin biosynthesis III (fungi) APJL_0403 PWY-7219 adenosine ribonucleotides de novo biosynthesis APJL_0404 PWY-6167 flavin biosynthesis II (archaea) APJL_0404 PWY-6168 flavin biosynthesis III (fungi) APJL_0404 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) APJL_0405 PWY-6167 flavin biosynthesis II (archaea) APJL_0405 PWY-6168 flavin biosynthesis III (fungi) APJL_0409 PWY-5988 wound-induced proteolysis I APJL_0409 PWY-6018 seed germination protein turnover APJL_0414 PWY-6871 3-methylbutanol biosynthesis APJL_0419 PWY-7183 pyrimidine nucleobases salvage I APJL_0422 PWY-7183 pyrimidine nucleobases salvage I APJL_0425 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) APJL_0428 PWY-7560 methylerythritol phosphate pathway II APJL_0432 PWY-5971 palmitate biosynthesis II (bacteria and plants) APJL_0432 PWY-5973 cis-vaccenate biosynthesis APJL_0432 PWY-5989 stearate biosynthesis II (bacteria and plants) APJL_0432 PWY-5994 palmitate biosynthesis I (animals and fungi) APJL_0432 PWY-6113 superpathway of mycolate biosynthesis APJL_0432 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) APJL_0432 PWY-6519 8-amino-7-oxononanoate biosynthesis I APJL_0432 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) APJL_0432 PWYG-321 mycolate biosynthesis APJL_0439 PWY-5386 methylglyoxal degradation I APJL_0447 PWY-4983 L-citrulline-nitric oxide cycle APJL_0447 PWY-4984 urea cycle APJL_0447 PWY-5 canavanine biosynthesis APJL_0447 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) APJL_0447 PWY-7400 L-arginine biosynthesis IV (archaebacteria) APJL_0450 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I APJL_0450 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II APJL_0450 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis APJL_0450 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) APJL_0458 PWY-7396 butanol and isobutanol biosynthesis (engineered) APJL_0460 PWY-1042 glycolysis IV (plant cytosol) APJL_0460 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_0460 PWY-6901 superpathway of glucose and xylose degradation APJL_0460 PWY-7003 glycerol degradation to butanol APJL_0467 PWY-5344 L-homocysteine biosynthesis APJL_0478 PWY-5392 reductive TCA cycle II APJL_0478 PWY-5537 pyruvate fermentation to acetate V APJL_0478 PWY-5538 pyruvate fermentation to acetate VI APJL_0478 PWY-5690 TCA cycle II (plants and fungi) APJL_0478 PWY-5913 TCA cycle VI (obligate autotrophs) APJL_0478 PWY-6728 methylaspartate cycle APJL_0478 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) APJL_0478 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) APJL_0479 PWY-5392 reductive TCA cycle II APJL_0479 PWY-5537 pyruvate fermentation to acetate V APJL_0479 PWY-5538 pyruvate fermentation to acetate VI APJL_0479 PWY-5690 TCA cycle II (plants and fungi) APJL_0479 PWY-5913 TCA cycle VI (obligate autotrophs) APJL_0479 PWY-6728 methylaspartate cycle APJL_0479 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) APJL_0479 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) APJL_0481 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA APJL_0482 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA APJL_0491 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation APJL_0493 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate APJL_0493 PWY-2161 folate polyglutamylation APJL_0493 PWY-2201 folate transformations I APJL_0493 PWY-3841 folate transformations II APJL_0525 PWY-6891 thiazole biosynthesis II (Bacillus) APJL_0525 PWY-6892 thiazole biosynthesis I (E. coli) APJL_0526 PWY-6891 thiazole biosynthesis II (Bacillus) APJL_0526 PWY-6892 thiazole biosynthesis I (E. coli) APJL_0527 PWY-6892 thiazole biosynthesis I (E. coli) APJL_0527 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II APJL_0528 PWY-6899 base-degraded thiamin salvage APJL_0528 PWY-7356 thiamin salvage IV (yeast) APJL_0581 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II APJL_0584 PWY-6749 CMP-legionaminate biosynthesis I APJL_0585 PWY-7221 guanosine ribonucleotides de novo biosynthesis APJL_0587 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation APJL_0587 PWY-6596 adenosine nucleotides degradation I APJL_0587 PWY-7221 guanosine ribonucleotides de novo biosynthesis APJL_0609 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II APJL_0615 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I APJL_0615 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) APJL_0615 PWY-6164 3-dehydroquinate biosynthesis I APJL_0617 PWY-7199 pyrimidine deoxyribonucleosides salvage APJL_0619 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_0620 PWY-5663 tetrahydrobiopterin biosynthesis I APJL_0620 PWY-5664 tetrahydrobiopterin biosynthesis II APJL_0620 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I APJL_0620 PWY-6703 preQ0 biosynthesis APJL_0620 PWY-6983 tetrahydrobiopterin biosynthesis III APJL_0620 PWY-7442 drosopterin and aurodrosopterin biosynthesis APJL_0626 PWY-4381 fatty acid biosynthesis initiation I APJL_0626 PWY-5743 3-hydroxypropanoate cycle APJL_0626 PWY-5744 glyoxylate assimilation APJL_0626 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle APJL_0626 PWY-6679 jadomycin biosynthesis APJL_0626 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) APJL_0627 PWY-2161 folate polyglutamylation APJL_0635 PWY-1281 sulfoacetaldehyde degradation I APJL_0635 PWY-5482 pyruvate fermentation to acetate II APJL_0635 PWY-5485 pyruvate fermentation to acetate IV APJL_0635 PWY-5497 purine nucleobases degradation II (anaerobic) APJL_0635 PWY-6637 sulfolactate degradation II APJL_0636 PWY-5482 pyruvate fermentation to acetate II APJL_0636 PWY-5485 pyruvate fermentation to acetate IV APJL_0636 PWY-5497 purine nucleobases degradation II (anaerobic) APJL_0641 PWY-3801 sucrose degradation II (sucrose synthase) APJL_0641 PWY-6527 stachyose degradation APJL_0641 PWY-6981 chitin biosynthesis APJL_0641 PWY-7238 sucrose biosynthesis II APJL_0641 PWY-7343 UDP-glucose biosynthesis APJL_0642 PWY-6749 CMP-legionaminate biosynthesis I APJL_0649 PWY-6123 inosine-5'-phosphate biosynthesis I APJL_0649 PWY-7234 inosine-5'-phosphate biosynthesis III APJL_0652 PWY-5913 TCA cycle VI (obligate autotrophs) APJL_0652 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) APJL_0652 PWY-6638 sulfolactate degradation III APJL_0652 PWY-6642 (R)-cysteate degradation APJL_0652 PWY-6643 coenzyme M biosynthesis II APJL_0652 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type APJL_0652 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type APJL_0652 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) APJL_0674 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) APJL_0678 PWY-6599 guanine and guanosine salvage II APJL_0678 PWY-6609 adenine and adenosine salvage III APJL_0678 PWY-6610 adenine and adenosine salvage IV APJL_0678 PWY-6620 guanine and guanosine salvage APJL_0680 PWY-2941 L-lysine biosynthesis II APJL_0680 PWY-2942 L-lysine biosynthesis III APJL_0680 PWY-5097 L-lysine biosynthesis VI APJL_0685 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_0685 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_0685 PWY-6454 vancomycin resistance I APJL_0685 PWY-6901 superpathway of glucose and xylose degradation APJL_0688 PWY-6823 molybdenum cofactor biosynthesis APJL_0691 PWY-6823 molybdenum cofactor biosynthesis APJL_0696 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) APJL_0697 PWY-6163 chorismate biosynthesis from 3-dehydroquinate APJL_0699 PWY-5344 L-homocysteine biosynthesis APJL_0699 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II APJL_0723 PWY-6700 queuosine biosynthesis APJL_0729 PWY-5101 L-isoleucine biosynthesis II APJL_0729 PWY-5103 L-isoleucine biosynthesis III APJL_0729 PWY-5104 L-isoleucine biosynthesis IV APJL_0729 PWY-5938 (R)-acetoin biosynthesis I APJL_0729 PWY-5939 (R)-acetoin biosynthesis II APJL_0729 PWY-6389 (S)-acetoin biosynthesis APJL_0729 PWY-7111 pyruvate fermentation to isobutanol (engineered) APJL_0730 PWY-5101 L-isoleucine biosynthesis II APJL_0730 PWY-5103 L-isoleucine biosynthesis III APJL_0730 PWY-5104 L-isoleucine biosynthesis IV APJL_0730 PWY-5938 (R)-acetoin biosynthesis I APJL_0730 PWY-5939 (R)-acetoin biosynthesis II APJL_0730 PWY-6389 (S)-acetoin biosynthesis APJL_0730 PWY-7111 pyruvate fermentation to isobutanol (engineered) APJL_0738 PWY-5686 UMP biosynthesis APJL_0743 PWY-7205 CMP phosphorylation APJL_0747 PWY-5491 diethylphosphate degradation APJL_0749 PWY-6163 chorismate biosynthesis from 3-dehydroquinate APJL_0752 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) APJL_0752 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I APJL_0756 PWY-5971 palmitate biosynthesis II (bacteria and plants) APJL_0756 PWY-5973 cis-vaccenate biosynthesis APJL_0756 PWY-5989 stearate biosynthesis II (bacteria and plants) APJL_0756 PWY-6113 superpathway of mycolate biosynthesis APJL_0756 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) APJL_0756 PWY-6519 8-amino-7-oxononanoate biosynthesis I APJL_0756 PWY-7096 triclosan resistance APJL_0756 PWYG-321 mycolate biosynthesis APJL_0767 PWY-6700 queuosine biosynthesis APJL_0770 PWY-7039 phosphatidate metabolism, as a signaling molecule APJL_0774 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA APJL_0774 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA APJL_0776 PWY-6891 thiazole biosynthesis II (Bacillus) APJL_0776 PWY-6892 thiazole biosynthesis I (E. coli) APJL_0776 PWY-7560 methylerythritol phosphate pathway II APJL_0777 PWY-5686 UMP biosynthesis APJL_0779 PWY-7560 methylerythritol phosphate pathway II APJL_0794 PWY-723 alkylnitronates degradation APJL_0804 PWY-6478 GDP-D-glycero-α-D-manno-heptose biosynthesis APJL_0805 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation APJL_0805 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type APJL_0807 PWY-7560 methylerythritol phosphate pathway II APJL_0808 PWY-7560 methylerythritol phosphate pathway II APJL_0825 PWY-5691 urate degradation to allantoin I APJL_0825 PWY-7394 urate degradation to allantoin II APJL_0831 PWY-6123 inosine-5'-phosphate biosynthesis I APJL_0831 PWY-6124 inosine-5'-phosphate biosynthesis II APJL_0831 PWY-7219 adenosine ribonucleotides de novo biosynthesis APJL_0831 PWY-7234 inosine-5'-phosphate biosynthesis III APJL_0840 PWY-1622 formaldehyde assimilation I (serine pathway) APJL_0840 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_0842 PWY-7193 pyrimidine ribonucleosides salvage I APJL_0843 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II APJL_0854 PWY-6700 queuosine biosynthesis APJL_0864 PWY-5041 S-adenosyl-L-methionine cycle II APJL_0864 PWY-6151 S-adenosyl-L-methionine cycle I APJL_0864 PWY-6936 seleno-amino acid biosynthesis APJL_0864 PWY-702 L-methionine biosynthesis II APJL_0865 PWY-2201 folate transformations I APJL_0865 PWY-3841 folate transformations II APJL_0880 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) APJL_0895 PWY-3841 folate transformations II APJL_0895 PWY-6614 tetrahydrofolate biosynthesis APJL_0900 PWY-1361 benzoyl-CoA degradation I (aerobic) APJL_0900 PWY-5109 2-methylbutanoate biosynthesis APJL_0900 PWY-5136 fatty acid β-oxidation II (peroxisome) APJL_0900 PWY-5138 unsaturated, even numbered fatty acid β-oxidation APJL_0900 PWY-5177 glutaryl-CoA degradation APJL_0900 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle APJL_0900 PWY-6435 4-hydroxybenzoate biosynthesis V APJL_0900 PWY-6583 pyruvate fermentation to butanol I APJL_0900 PWY-6863 pyruvate fermentation to hexanol APJL_0900 PWY-6883 pyruvate fermentation to butanol II APJL_0900 PWY-6944 androstenedione degradation APJL_0900 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) APJL_0900 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) APJL_0900 PWY-7007 methyl ketone biosynthesis APJL_0900 PWY-7046 4-coumarate degradation (anaerobic) APJL_0900 PWY-7094 fatty acid salvage APJL_0900 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis APJL_0900 PWY-735 jasmonic acid biosynthesis APJL_0900 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) APJL_0909 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate APJL_0909 PWY-2201 folate transformations I APJL_0909 PWY-3841 folate transformations II APJL_0909 PWY-5030 L-histidine degradation III APJL_0909 PWY-5497 purine nucleobases degradation II (anaerobic) APJL_0909 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate APJL_0911 PWY-2941 L-lysine biosynthesis II APJL_0911 PWY-2942 L-lysine biosynthesis III APJL_0911 PWY-5097 L-lysine biosynthesis VI APJL_0915 PWY-5663 tetrahydrobiopterin biosynthesis I APJL_0915 PWY-5664 tetrahydrobiopterin biosynthesis II APJL_0915 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I APJL_0915 PWY-6703 preQ0 biosynthesis APJL_0915 PWY-6983 tetrahydrobiopterin biosynthesis III APJL_0915 PWY-7442 drosopterin and aurodrosopterin biosynthesis APJL_0941 PWY-6823 molybdenum cofactor biosynthesis APJL_0941 PWY-6891 thiazole biosynthesis II (Bacillus) APJL_0941 PWY-6892 thiazole biosynthesis I (E. coli) APJL_0941 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis APJL_0948 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II APJL_0949 PWY-6519 8-amino-7-oxononanoate biosynthesis I APJL_0955 PWY-5265 peptidoglycan biosynthesis II (staphylococci) APJL_0955 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) APJL_0971 PWY-6123 inosine-5'-phosphate biosynthesis I APJL_0971 PWY-6124 inosine-5'-phosphate biosynthesis II APJL_0971 PWY-7234 inosine-5'-phosphate biosynthesis III APJL_1003 PWY-1861 formaldehyde assimilation II (RuMP Cycle) APJL_1003 PWY-5723 Rubisco shunt APJL_1003 PWY-6891 thiazole biosynthesis II (Bacillus) APJL_1003 PWY-6892 thiazole biosynthesis I (E. coli) APJL_1003 PWY-6901 superpathway of glucose and xylose degradation APJL_1003 PWY-7560 methylerythritol phosphate pathway II APJL_1005 PWY-5506 methanol oxidation to formaldehyde IV APJL_1009 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III APJL_1009 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I APJL_1009 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV APJL_1009 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP APJL_1009 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II APJL_1009 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II APJL_1009 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I APJL_1009 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis APJL_1010 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III APJL_1010 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I APJL_1010 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV APJL_1010 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP APJL_1010 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II APJL_1010 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II APJL_1010 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I APJL_1010 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis APJL_1011 PWY-6317 galactose degradation I (Leloir pathway) APJL_1011 PWY-6527 stachyose degradation APJL_1012 PWY-3821 galactose degradation III APJL_1012 PWY-6317 galactose degradation I (Leloir pathway) APJL_1012 PWY-6527 stachyose degradation APJL_1013 PWY-2723 trehalose degradation V APJL_1013 PWY-6317 galactose degradation I (Leloir pathway) APJL_1013 PWY-6737 starch degradation V APJL_1014 PWY-6807 xyloglucan degradation II (exoglucanase) APJL_1027 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) APJL_1027 PWY-5189 tetrapyrrole biosynthesis II (from glycine) APJL_1028 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) APJL_1028 PWY-5189 tetrapyrrole biosynthesis II (from glycine) APJL_1029 PWY-3162 L-tryptophan degradation V (side chain pathway) APJL_1029 PWY-5057 L-valine degradation II APJL_1029 PWY-5076 L-leucine degradation III APJL_1029 PWY-5078 L-isoleucine degradation II APJL_1029 PWY-5079 L-phenylalanine degradation III APJL_1029 PWY-5082 L-methionine degradation III APJL_1029 PWY-5162 2-oxopentenoate degradation APJL_1029 PWY-5436 L-threonine degradation IV APJL_1029 PWY-5480 pyruvate fermentation to ethanol I APJL_1029 PWY-5486 pyruvate fermentation to ethanol II APJL_1029 PWY-5751 phenylethanol biosynthesis APJL_1029 PWY-6028 acetoin degradation APJL_1029 PWY-6313 serotonin degradation APJL_1029 PWY-6333 acetaldehyde biosynthesis I APJL_1029 PWY-6342 noradrenaline and adrenaline degradation APJL_1029 PWY-6587 pyruvate fermentation to ethanol III APJL_1029 PWY-6802 salidroside biosynthesis APJL_1029 PWY-6871 3-methylbutanol biosynthesis APJL_1029 PWY-7013 L-1,2-propanediol degradation APJL_1029 PWY-7085 triethylamine degradation APJL_1029 PWY-7111 pyruvate fermentation to isobutanol (engineered) APJL_1029 PWY-7118 chitin degradation to ethanol APJL_1029 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation APJL_1029 PWY-7396 butanol and isobutanol biosynthesis (engineered) APJL_1029 PWY-7557 dehydrodiconiferyl alcohol degradation APJL_1032 PWY-4202 arsenate detoxification I (glutaredoxin) APJL_1032 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation APJL_1032 PWY-6608 guanosine nucleotides degradation III APJL_1032 PWY-6609 adenine and adenosine salvage III APJL_1032 PWY-6611 adenine and adenosine salvage V APJL_1032 PWY-6620 guanine and guanosine salvage APJL_1032 PWY-6627 salinosporamide A biosynthesis APJL_1032 PWY-6644 fluoroacetate and fluorothreonine biosynthesis APJL_1032 PWY-7179 purine deoxyribonucleosides degradation I APJL_1032 PWY-7179-1 purine deoxyribonucleosides degradation APJL_1033 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation APJL_1036 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) APJL_1036 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation APJL_1036 PWY-7242 D-fructuronate degradation APJL_1036 PWY-7310 D-glucosaminate degradation APJL_1038 PWY-7247 β-D-glucuronide and D-glucuronate degradation APJL_1038 PWY-7248 pectin degradation III APJL_1051 PWY-3461 L-tyrosine biosynthesis II APJL_1051 PWY-3462 L-phenylalanine biosynthesis II APJL_1051 PWY-6120 L-tyrosine biosynthesis III APJL_1051 PWY-6627 salinosporamide A biosynthesis APJL_1051 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) APJL_1054 PWY-5480 pyruvate fermentation to ethanol I APJL_1054 PWY-5485 pyruvate fermentation to acetate IV APJL_1054 PWY-5493 reductive monocarboxylic acid cycle APJL_1060 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) APJL_1060 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I APJL_1060 PWY-5901 2,3-dihydroxybenzoate biosynthesis APJL_1060 PWY-6406 salicylate biosynthesis I APJL_1066 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) APJL_1066 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) APJL_1091 PWY-7219 adenosine ribonucleotides de novo biosynthesis APJL_1096 PWY-5041 S-adenosyl-L-methionine cycle II APJL_1096 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis APJL_1101 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) APJL_1105 PWY-4202 arsenate detoxification I (glutaredoxin) APJL_1105 PWY-4621 arsenate detoxification II (glutaredoxin) APJL_1107 PWY-5392 reductive TCA cycle II APJL_1107 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation APJL_1107 PWY-5690 TCA cycle II (plants and fungi) APJL_1107 PWY-5913 TCA cycle VI (obligate autotrophs) APJL_1107 PWY-6728 methylaspartate cycle APJL_1107 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) APJL_1107 PWY-7254 TCA cycle VII (acetate-producers) APJL_1107 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) APJL_1109 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I APJL_1109 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II APJL_1109 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis APJL_1110 PWY-6902 chitin degradation II APJL_1111 PWY-6703 preQ0 biosynthesis APJL_1113 PWY-6703 preQ0 biosynthesis APJL_1116 PWY-5988 wound-induced proteolysis I APJL_1116 PWY-6018 seed germination protein turnover APJL_1126 PWY-5667 CDP-diacylglycerol biosynthesis I APJL_1126 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) APJL_1130 PWY-6902 chitin degradation II APJL_1132 PWY-1042 glycolysis IV (plant cytosol) APJL_1132 PWY-1622 formaldehyde assimilation I (serine pathway) APJL_1132 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) APJL_1132 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_1132 PWY-5723 Rubisco shunt APJL_1132 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) APJL_1132 PWY-6886 1-butanol autotrophic biosynthesis APJL_1132 PWY-6901 superpathway of glucose and xylose degradation APJL_1132 PWY-7003 glycerol degradation to butanol APJL_1132 PWY-7124 ethylene biosynthesis V (engineered) APJL_1132 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) APJL_1143 PWY-1042 glycolysis IV (plant cytosol) APJL_1143 PWY-1861 formaldehyde assimilation II (RuMP Cycle) APJL_1143 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_1143 PWY-7385 1,3-propanediol biosynthesis (engineered) APJL_1156 PWY-3801 sucrose degradation II (sucrose synthase) APJL_1156 PWY-5054 sorbitol biosynthesis I APJL_1156 PWY-5384 sucrose degradation IV (sucrose phosphorylase) APJL_1156 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II APJL_1156 PWY-5659 GDP-mannose biosynthesis APJL_1156 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) APJL_1156 PWY-621 sucrose degradation III (sucrose invertase) APJL_1156 PWY-622 starch biosynthesis APJL_1156 PWY-6531 mannitol cycle APJL_1156 PWY-6981 chitin biosynthesis APJL_1156 PWY-7238 sucrose biosynthesis II APJL_1156 PWY-7347 sucrose biosynthesis III APJL_1156 PWY-7385 1,3-propanediol biosynthesis (engineered) APJL_1158 PWY-6163 chorismate biosynthesis from 3-dehydroquinate APJL_1165 PWY-5958 acridone alkaloid biosynthesis APJL_1165 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis APJL_1165 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis APJL_1167 PWY-5958 acridone alkaloid biosynthesis APJL_1167 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis APJL_1167 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis APJL_1175 PWY-5041 S-adenosyl-L-methionine cycle II APJL_1175 PWY-6151 S-adenosyl-L-methionine cycle I APJL_1175 PWY-6936 seleno-amino acid biosynthesis APJL_1175 PWY-702 L-methionine biosynthesis II APJL_1183 PWY-5958 acridone alkaloid biosynthesis APJL_1183 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis APJL_1183 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis APJL_1184 PWY-5958 acridone alkaloid biosynthesis APJL_1184 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis APJL_1184 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis APJL_1193 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I APJL_1193 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II APJL_1193 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis APJL_1198 PWY-7560 methylerythritol phosphate pathway II APJL_1201 PWY-4983 L-citrulline-nitric oxide cycle APJL_1201 PWY-4984 urea cycle APJL_1201 PWY-5 canavanine biosynthesis APJL_1201 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) APJL_1201 PWY-7400 L-arginine biosynthesis IV (archaebacteria) APJL_1216 PWY-6012 acyl carrier protein metabolism I APJL_1217 PWY-1801 formaldehyde oxidation II (glutathione-dependent) APJL_1221 PWY-1801 formaldehyde oxidation II (glutathione-dependent) APJL_1221 PWY-3162 L-tryptophan degradation V (side chain pathway) APJL_1221 PWY-5057 L-valine degradation II APJL_1221 PWY-5076 L-leucine degradation III APJL_1221 PWY-5078 L-isoleucine degradation II APJL_1221 PWY-5079 L-phenylalanine degradation III APJL_1221 PWY-5082 L-methionine degradation III APJL_1221 PWY-5480 pyruvate fermentation to ethanol I APJL_1221 PWY-5486 pyruvate fermentation to ethanol II APJL_1221 PWY-5751 phenylethanol biosynthesis APJL_1221 PWY-6028 acetoin degradation APJL_1221 PWY-6313 serotonin degradation APJL_1221 PWY-6333 acetaldehyde biosynthesis I APJL_1221 PWY-6342 noradrenaline and adrenaline degradation APJL_1221 PWY-6587 pyruvate fermentation to ethanol III APJL_1221 PWY-6802 salidroside biosynthesis APJL_1221 PWY-6871 3-methylbutanol biosynthesis APJL_1221 PWY-7013 L-1,2-propanediol degradation APJL_1221 PWY-7111 pyruvate fermentation to isobutanol (engineered) APJL_1221 PWY-7118 chitin degradation to ethanol APJL_1221 PWY-7396 butanol and isobutanol biosynthesis (engineered) APJL_1221 PWY-7557 dehydrodiconiferyl alcohol degradation APJL_1229 PWY-6151 S-adenosyl-L-methionine cycle I APJL_1229 PWY-6153 autoinducer AI-2 biosynthesis I APJL_1229 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) APJL_1235 PWY-2941 L-lysine biosynthesis II APJL_1235 PWY-2942 L-lysine biosynthesis III APJL_1235 PWY-5097 L-lysine biosynthesis VI APJL_1235 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) APJL_1235 PWY-6559 spermidine biosynthesis II APJL_1235 PWY-6562 norspermidine biosynthesis APJL_1235 PWY-7153 grixazone biosynthesis APJL_1235 PWY-7400 L-arginine biosynthesis IV (archaebacteria) APJL_1244 PWY-5941 glycogen degradation II (eukaryotic) APJL_1244 PWY-622 starch biosynthesis APJL_1244 PWY-6731 starch degradation III APJL_1244 PWY-6737 starch degradation V APJL_1244 PWY-7238 sucrose biosynthesis II APJL_1252 PWY-5941 glycogen degradation II (eukaryotic) APJL_1252 PWY-6724 starch degradation II APJL_1252 PWY-6737 starch degradation V APJL_1252 PWY-7238 sucrose biosynthesis II APJL_1255 PWY-4081 glutathione redox reactions I APJL_1261 PWY-1042 glycolysis IV (plant cytosol) APJL_1261 PWY-1861 formaldehyde assimilation II (RuMP Cycle) APJL_1261 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_1261 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) APJL_1261 PWY-7385 1,3-propanediol biosynthesis (engineered) APJL_1262 PWY-1042 glycolysis IV (plant cytosol) APJL_1262 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_1262 PWY-6886 1-butanol autotrophic biosynthesis APJL_1262 PWY-6901 superpathway of glucose and xylose degradation APJL_1262 PWY-7003 glycerol degradation to butanol APJL_1286 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) APJL_1299 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_1299 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_1309 PWY-1622 formaldehyde assimilation I (serine pathway) APJL_1309 PWY-5392 reductive TCA cycle II APJL_1309 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation APJL_1309 PWY-5690 TCA cycle II (plants and fungi) APJL_1309 PWY-5913 TCA cycle VI (obligate autotrophs) APJL_1309 PWY-6728 methylaspartate cycle APJL_1309 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) APJL_1309 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type APJL_1309 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) APJL_1311 PWY-7219 adenosine ribonucleotides de novo biosynthesis APJL_1314 PWY-3821 galactose degradation III APJL_1314 PWY-6317 galactose degradation I (Leloir pathway) APJL_1314 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis APJL_1314 PWY-6527 stachyose degradation APJL_1314 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis APJL_1314 PWY-7344 UDP-D-galactose biosynthesis APJL_1321 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_1321 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_1323 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II APJL_1323 PWY-6855 chitin degradation I (archaea) APJL_1323 PWY-6906 chitin derivatives degradation APJL_1324 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) APJL_1331 PWY-4981 L-proline biosynthesis II (from arginine) APJL_1331 PWY-4984 urea cycle APJL_1331 PWY-7400 L-arginine biosynthesis IV (archaebacteria) APJL_1333 PWY-7310 D-glucosaminate degradation APJL_1360 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I APJL_1360 PWY-6148 tetrahydromethanopterin biosynthesis APJL_1360 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) APJL_1360 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) APJL_1361 PWY-6556 pyrimidine ribonucleosides salvage II APJL_1361 PWY-7181 pyrimidine deoxyribonucleosides degradation APJL_1361 PWY-7193 pyrimidine ribonucleosides salvage I APJL_1361 PWY-7199 pyrimidine deoxyribonucleosides salvage APJL_1393 PWY-6339 syringate degradation APJL_1395 PWY-6339 syringate degradation APJL_1402 PWY-4381 fatty acid biosynthesis initiation I APJL_1410 PWY-7310 D-glucosaminate degradation APJL_1414 PWY-3861 mannitol degradation II APJL_1414 PWY-3881 mannitol biosynthesis APJL_1414 PWY-5659 GDP-mannose biosynthesis APJL_1414 PWY-7456 mannan degradation APJL_1414 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) APJL_1420 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_1432 PWY-5669 phosphatidylethanolamine biosynthesis I APJL_1439 PWY-6840 homoglutathione biosynthesis APJL_1439 PWY-7255 ergothioneine biosynthesis I (bacteria) APJL_1446 PWY-7254 TCA cycle VII (acetate-producers) APJL_1454 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_1454 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_1475 PWY-1861 formaldehyde assimilation II (RuMP Cycle) APJL_1475 PWY-5723 Rubisco shunt APJL_1476 PWY-6749 CMP-legionaminate biosynthesis I APJL_1483 PWY-5839 menaquinol-7 biosynthesis APJL_1483 PWY-5851 demethylmenaquinol-9 biosynthesis APJL_1483 PWY-5852 demethylmenaquinol-8 biosynthesis I APJL_1483 PWY-5853 demethylmenaquinol-6 biosynthesis I APJL_1483 PWY-5890 menaquinol-10 biosynthesis APJL_1483 PWY-5891 menaquinol-11 biosynthesis APJL_1483 PWY-5892 menaquinol-12 biosynthesis APJL_1483 PWY-5895 menaquinol-13 biosynthesis APJL_1492 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis APJL_1492 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis APJL_1497 PWY-3221 dTDP-L-rhamnose biosynthesis II APJL_1497 PWY-6808 dTDP-D-forosamine biosynthesis APJL_1497 PWY-6942 dTDP-D-desosamine biosynthesis APJL_1497 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis APJL_1497 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis APJL_1497 PWY-6974 dTDP-L-olivose biosynthesis APJL_1497 PWY-6976 dTDP-L-mycarose biosynthesis APJL_1497 PWY-7104 dTDP-L-megosamine biosynthesis APJL_1497 PWY-7301 dTDP-β-L-noviose biosynthesis APJL_1497 PWY-7312 dTDP-D-β-fucofuranose biosynthesis APJL_1497 PWY-7315 dTDP-N-acetylthomosamine biosynthesis APJL_1497 PWY-7316 dTDP-N-acetylviosamine biosynthesis APJL_1497 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis APJL_1497 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis APJL_1497 PWY-7414 dTDP-α-D-mycaminose biosynthesis APJL_1497 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis APJL_1510 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) APJL_1510 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) APJL_1511 PWY-4381 fatty acid biosynthesis initiation I APJL_1511 PWY-5743 3-hydroxypropanoate cycle APJL_1511 PWY-5744 glyoxylate assimilation APJL_1511 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle APJL_1511 PWY-6679 jadomycin biosynthesis APJL_1511 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) APJL_1513 PWY-5667 CDP-diacylglycerol biosynthesis I APJL_1513 PWY-5981 CDP-diacylglycerol biosynthesis III APJL_1513 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) APJL_1513 PWY-7417 phospholipid remodeling (phosphatidate, yeast) APJL_1536 PWY-5667 CDP-diacylglycerol biosynthesis I APJL_1536 PWY-5981 CDP-diacylglycerol biosynthesis III APJL_1537 PWY-6936 seleno-amino acid biosynthesis APJL_1537 PWY-7274 D-cycloserine biosynthesis APJL_1539 PWY-3961 phosphopantothenate biosynthesis II APJL_1546 PWY-7560 methylerythritol phosphate pathway II APJL_1551 PWY-2941 L-lysine biosynthesis II APJL_1551 PWY-2942 L-lysine biosynthesis III APJL_1551 PWY-5097 L-lysine biosynthesis VI APJL_1555 PWY-3781 aerobic respiration I (cytochrome c) APJL_1555 PWY-4302 aerobic respiration III (alternative oxidase pathway) APJL_1555 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation APJL_1555 PWY-5690 TCA cycle II (plants and fungi) APJL_1555 PWY-6728 methylaspartate cycle APJL_1555 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) APJL_1555 PWY-7254 TCA cycle VII (acetate-producers) APJL_1555 PWY-7279 aerobic respiration II (cytochrome c) (yeast) APJL_1556 PWY-3781 aerobic respiration I (cytochrome c) APJL_1556 PWY-4302 aerobic respiration III (alternative oxidase pathway) APJL_1556 PWY-5392 reductive TCA cycle II APJL_1556 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation APJL_1556 PWY-5690 TCA cycle II (plants and fungi) APJL_1556 PWY-5913 TCA cycle VI (obligate autotrophs) APJL_1556 PWY-6728 methylaspartate cycle APJL_1556 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) APJL_1556 PWY-7254 TCA cycle VII (acetate-producers) APJL_1556 PWY-7279 aerobic respiration II (cytochrome c) (yeast) APJL_1556 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) APJL_1558 PWY-2941 L-lysine biosynthesis II APJL_1558 PWY-5097 L-lysine biosynthesis VI APJL_1577 PWY-7315 dTDP-N-acetylthomosamine biosynthesis APJL_1580 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis APJL_1582 PWY-5265 peptidoglycan biosynthesis II (staphylococci) APJL_1582 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) APJL_1582 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) APJL_1582 PWY-7290 Escherichia coli serotype O86 O-antigen biosynthesis APJL_1582 PWY-7530 β-D-galactosaminyl-(1→3)-N-acetyl-α-D-galactosamine biosynthesis APJL_1583 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) APJL_1594 PWY-4261 glycerol degradation I APJL_1626 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) APJL_1626 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) APJL_1626 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) APJL_1627 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) APJL_1627 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) APJL_1629 PWY-5265 peptidoglycan biosynthesis II (staphylococci) APJL_1629 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) APJL_1649 PWY-5704 urea degradation II APJL_1650 PWY-5704 urea degradation II APJL_1651 PWY-5704 urea degradation II APJL_1663 PWY-7310 D-glucosaminate degradation APJL_1664 PWY-6749 CMP-legionaminate biosynthesis I APJL_1670 PWY-6151 S-adenosyl-L-methionine cycle I APJL_1670 PWY-6153 autoinducer AI-2 biosynthesis I APJL_1670 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) APJL_1679 PWY-7219 adenosine ribonucleotides de novo biosynthesis APJL_1681 PWY-7219 adenosine ribonucleotides de novo biosynthesis APJL_1695 PWY-7310 D-glucosaminate degradation APJL_1697 PWY-5530 sorbitol biosynthesis II APJL_1697 PWY-6163 chorismate biosynthesis from 3-dehydroquinate APJL_1714 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I APJL_1714 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II APJL_1714 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis APJL_1717 PWY-4261 glycerol degradation I APJL_1730 PWY-5686 UMP biosynthesis APJL_1732 PWY-7310 D-glucosaminate degradation APJL_1735 PWY-6961 L-ascorbate degradation II (bacterial, aerobic) APJL_1736 PWY-6961 L-ascorbate degradation II (bacterial, aerobic) APJL_1748 PWY-7310 D-glucosaminate degradation APJL_1785 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) APJL_1785 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I APJL_1789 PWY-2941 L-lysine biosynthesis II APJL_1789 PWY-2942 L-lysine biosynthesis III APJL_1789 PWY-5097 L-lysine biosynthesis VI APJL_1790 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II APJL_1790 PWY-6855 chitin degradation I (archaea) APJL_1790 PWY-6906 chitin derivatives degradation APJL_1791 PWY-6906 chitin derivatives degradation APJL_1791 PWY-7077 N-acetyl-D-galactosamine degradation APJL_1791 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation APJL_1792 PWY-5392 reductive TCA cycle II APJL_1792 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation APJL_1792 PWY-5690 TCA cycle II (plants and fungi) APJL_1792 PWY-5913 TCA cycle VI (obligate autotrophs) APJL_1792 PWY-6728 methylaspartate cycle APJL_1792 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) APJL_1792 PWY-7254 TCA cycle VII (acetate-producers) APJL_1792 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) APJL_1824 PWY-6829 tRNA methylation (yeast) APJL_1824 PWY-7285 methylwyosine biosynthesis APJL_1824 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis APJL_1853 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III APJL_1853 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I APJL_1853 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II APJL_1853 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation APJL_1853 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV APJL_1853 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP APJL_1856 PWY-1861 formaldehyde assimilation II (RuMP Cycle) APJL_1856 PWY-5723 Rubisco shunt APJL_1859 PWY-5265 peptidoglycan biosynthesis II (staphylococci) APJL_1859 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) APJL_1859 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) APJL_1859 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) APJL_1860 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) APJL_1860 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I APJL_1878 PWY-4202 arsenate detoxification I (glutaredoxin) APJL_1878 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation APJL_1878 PWY-6608 guanosine nucleotides degradation III APJL_1878 PWY-6609 adenine and adenosine salvage III APJL_1878 PWY-6611 adenine and adenosine salvage V APJL_1878 PWY-6620 guanine and guanosine salvage APJL_1878 PWY-6627 salinosporamide A biosynthesis APJL_1878 PWY-6644 fluoroacetate and fluorothreonine biosynthesis APJL_1878 PWY-7179 purine deoxyribonucleosides degradation I APJL_1878 PWY-7179-1 purine deoxyribonucleosides degradation APJL_1879 PWY-5755 4-hydroxybenzoate biosynthesis II (microbes) APJL_1879 PWY-5870 ubiquinol-8 biosynthesis (eukaryotic) APJL_1879 PWY-6148 tetrahydromethanopterin biosynthesis APJL_1880 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_1880 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_1881 PWY-6683 sulfate reduction III (assimilatory) APJL_1882 PWY-6683 sulfate reduction III (assimilatory) APJL_1883 PWY-5278 sulfite oxidation III APJL_1883 PWY-5340 sulfate activation for sulfonation APJL_1883 PWY-6683 sulfate reduction III (assimilatory) APJL_1883 PWY-6932 selenate reduction APJL_1884 PWY-5278 sulfite oxidation III APJL_1884 PWY-5340 sulfate activation for sulfonation APJL_1884 PWY-6683 sulfate reduction III (assimilatory) APJL_1884 PWY-6932 selenate reduction APJL_1886 PWY-5194 siroheme biosynthesis APJL_1886 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) APJL_1892 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) APJL_1892 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) APJL_1893 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) APJL_1893 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) APJL_1897 PWY-5101 L-isoleucine biosynthesis II APJL_1897 PWY-5103 L-isoleucine biosynthesis III APJL_1897 PWY-5104 L-isoleucine biosynthesis IV APJL_1897 PWY-7111 pyruvate fermentation to isobutanol (engineered) APJL_1905 PWY-6163 chorismate biosynthesis from 3-dehydroquinate APJL_1905 PWY-6416 quinate degradation II APJL_1905 PWY-6707 gallate biosynthesis APJL_1909 PWY-5964 guanylyl molybdenum cofactor biosynthesis APJL_1920 PWY-6614 tetrahydrofolate biosynthesis APJL_1932 PWY-5971 palmitate biosynthesis II (bacteria and plants) APJL_1932 PWY-5973 cis-vaccenate biosynthesis APJL_1932 PWY-5989 stearate biosynthesis II (bacteria and plants) APJL_1932 PWY-5994 palmitate biosynthesis I (animals and fungi) APJL_1932 PWY-6113 superpathway of mycolate biosynthesis APJL_1932 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) APJL_1932 PWY-6519 8-amino-7-oxononanoate biosynthesis I APJL_1932 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) APJL_1932 PWYG-321 mycolate biosynthesis APJL_1936 PWY-181 photorespiration APJL_1954 PWY-4261 glycerol degradation I APJL_1966 PWY-2723 trehalose degradation V APJL_1966 PWY-5384 sucrose degradation IV (sucrose phosphorylase) APJL_1966 PWY-5661 GDP-glucose biosynthesis APJL_1966 PWY-5940 streptomycin biosynthesis APJL_1966 PWY-621 sucrose degradation III (sucrose invertase) APJL_1966 PWY-622 starch biosynthesis APJL_1966 PWY-6731 starch degradation III APJL_1966 PWY-6737 starch degradation V APJL_1966 PWY-6981 chitin biosynthesis APJL_1966 PWY-7238 sucrose biosynthesis II APJL_1966 PWY-7343 UDP-glucose biosynthesis APJL_1972 PWY-1042 glycolysis IV (plant cytosol) APJL_1972 PWY-5484 glycolysis II (from fructose 6-phosphate) APJL_1972 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) APJL_1972 PWY-7003 glycerol degradation to butanol APJL_1974 PWY-5381 pyridine nucleotide cycling (plants) APJL_1974 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation APJL_1974 PWY-6596 adenosine nucleotides degradation I APJL_1974 PWY-6606 guanosine nucleotides degradation II APJL_1974 PWY-6607 guanosine nucleotides degradation I APJL_1974 PWY-6608 guanosine nucleotides degradation III APJL_1974 PWY-7185 UTP and CTP dephosphorylation I APJL_1987 PWY-381 nitrate reduction II (assimilatory) APJL_1987 PWY-5675 nitrate reduction V (assimilatory) APJL_1987 PWY-6549 L-glutamine biosynthesis III APJL_1987 PWY-6963 ammonia assimilation cycle I APJL_1987 PWY-6964 ammonia assimilation cycle II APJL_1991 PWY-6012 acyl carrier protein metabolism I APJL_1991 PWY-6012-1 acyl carrier protein metabolism II (mammalian) APJL_2007 PWY-2781 cis-zeatin biosynthesis APJL_2015 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III APJL_2015 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I APJL_2015 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II APJL_2015 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation APJL_2023 PWY-6409 pyoverdine I biosynthesis APJL_2023 PWY-6562 norspermidine biosynthesis APJL_2023 PWY-761 rhizobactin 1021 biosynthesis APJL_2030 PWY-5839 menaquinol-7 biosynthesis APJL_2030 PWY-5844 menaquinol-9 biosynthesis APJL_2030 PWY-5849 menaquinol-6 biosynthesis APJL_2030 PWY-5890 menaquinol-10 biosynthesis APJL_2030 PWY-5891 menaquinol-11 biosynthesis APJL_2030 PWY-5892 menaquinol-12 biosynthesis APJL_2030 PWY-5895 menaquinol-13 biosynthesis APJL_2036 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) APJL_2036 PWY-5189 tetrapyrrole biosynthesis II (from glycine) APJL_2040 PWY-5367 petroselinate biosynthesis APJL_2040 PWY-5971 palmitate biosynthesis II (bacteria and plants) APJL_2040 PWY-5973 cis-vaccenate biosynthesis APJL_2040 PWY-5989 stearate biosynthesis II (bacteria and plants) APJL_2040 PWY-5994 palmitate biosynthesis I (animals and fungi) APJL_2040 PWY-6113 superpathway of mycolate biosynthesis APJL_2040 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) APJL_2040 PWY-6519 8-amino-7-oxononanoate biosynthesis I APJL_2040 PWY-6951 APJL_2040|fabG|YP_001653029.1|GeneID:5852018 APJL_2040 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) APJL_2040 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) APJL_2040 PWYG-321 mycolate biosynthesis APJL_2041 PWY-4381 fatty acid biosynthesis initiation I APJL_2041 PWY-6799 fatty acid biosynthesis (plant mitochondria) APJL_2041 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) APJL_2059 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) APJL_2059 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) APJL_2068 PWY-6123 inosine-5'-phosphate biosynthesis I APJL_2068 PWY-6124 inosine-5'-phosphate biosynthesis II APJL_2068 PWY-7234 inosine-5'-phosphate biosynthesis III APJL_2084 PWY-621 sucrose degradation III (sucrose invertase) APJL_2086 PWY-6523 nitrite-dependent anaerobic methane oxidation APJL_2086 PWY-6748 nitrate reduction VII (denitrification) APJL_2086 PWY-7084 nitrifier denitrification APJL_2091 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I APJL_2091 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate)