APE_0013.1 PWY-5101 L-isoleucine biosynthesis II
APE_0013.1 PWY-5103 L-isoleucine biosynthesis III
APE_0013.1 PWY-5104 L-isoleucine biosynthesis IV
APE_0013.1 PWY-7111 pyruvate fermentation to isobutanol (engineered)
APE_0017.1 PWY-4261 glycerol degradation I
APE_0033.1 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
APE_0033.1 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type
APE_0069.1 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
APE_0069.1 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
APE_0069.1 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
APE_0069.1 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation
APE_0079 PWY-40 putrescine biosynthesis I
APE_0079 PWY-43 putrescine biosynthesis II
APE_0079 PWY-6305 putrescine biosynthesis IV
APE_0079 PWY-6834 spermidine biosynthesis III
APE_0137 PWY-4041 γ-glutamyl cycle
APE_0137 PWY-5826 hypoglycin biosynthesis
APE_0146.1 PWY-3341 L-proline biosynthesis III
APE_0146.1 PWY-4981 L-proline biosynthesis II (from arginine)
APE_0146.1 PWY-6344 L-ornithine degradation II (Stickland reaction)
APE_0158.1 PWY-2201 folate transformations I
APE_0158.1 PWY-3841 folate transformations II
APE_0161.1 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
APE_0166.1 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II
APE_0166.1 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I
APE_0166.1 PWY-6268 adenosylcobalamin salvage from cobalamin
APE_0166.1 PWY-6269 adenosylcobalamin salvage from cobinamide II
APE_0173.1 PWY-1042 glycolysis IV (plant cytosol)
APE_0173.1 PWY-5484 glycolysis II (from fructose 6-phosphate)
APE_0173.1 PWY-6886 1-butanol autotrophic biosynthesis
APE_0173.1 PWY-6901 superpathway of glucose and xylose degradation
APE_0173.1 PWY-7003 glycerol degradation to butanol
APE_0177 PWY-6823 molybdenum cofactor biosynthesis
APE_0222.1 PWY-5747 2-methylcitrate cycle II
APE_0235.1 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus)
APE_0235.1 PWY-6894 thiamin diphosphate biosynthesis I (E. coli)
APE_0235.1 PWY-6896 thiamin salvage I
APE_0235.1 PWY-6897 thiamin salvage II
APE_0236.1 PWY-5194 siroheme biosynthesis
APE_0236.1 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion)
APE_0244.1 PWY-6466 pyridoxal 5'-phosphate biosynthesis II
APE_0246.1 PWY-6466 pyridoxal 5'-phosphate biosynthesis II
APE_0249.1 PWY-5198 factor 420 biosynthesis
APE_0252 PWY-5198 factor 420 biosynthesis
APE_0261.1 PWY-5686 UMP biosynthesis
APE_0306.1 PWY-4261 glycerol degradation I
APE_0308.1 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APE_0308.1 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
APE_0317.1 PWY-6749 CMP-legionaminate biosynthesis I
APE_0333.1 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
APE_0337.1 PWY-7533 gliotoxin biosynthesis
APE_0404.1 PWY-7219 adenosine ribonucleotides de novo biosynthesis
APE_0405.1 PWY-7219 adenosine ribonucleotides de novo biosynthesis
APE_0421 PWY-6482 diphthamide biosynthesis (archaea)
APE_0421 PWY-7546 diphthamide biosynthesis (eukaryotes)
APE_0447.1 PWY-6482 diphthamide biosynthesis (archaea)
APE_0447.1 PWY-7546 diphthamide biosynthesis (eukaryotes)
APE_0450 PWY-6823 molybdenum cofactor biosynthesis
APE_0478.1 PWY-6823 molybdenum cofactor biosynthesis
APE_0487 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APE_0487 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
APE_0489 PWY-1042 glycolysis IV (plant cytosol)
APE_0489 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
APE_0489 PWY-5484 glycolysis II (from fructose 6-phosphate)
APE_0489 PWY-5723 Rubisco shunt
APE_0489 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
APE_0489 PWY-6886 1-butanol autotrophic biosynthesis
APE_0489 PWY-6901 superpathway of glucose and xylose degradation
APE_0489 PWY-7003 glycerol degradation to butanol
APE_0489 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APE_0489 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
APE_0493.1 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation
APE_0493.1 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II
APE_0498 PWY-6829 tRNA methylation (yeast)
APE_0498 PWY-7285 methylwyosine biosynthesis
APE_0498 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
APE_0519.1 PWY-6349 CDP-archaeol biosynthesis
APE_0545.1 PWY-7183 pyrimidine nucleobases salvage I
APE_0562a PWY-3461 L-tyrosine biosynthesis II
APE_0562a PWY-3462 L-phenylalanine biosynthesis II
APE_0562a PWY-6120 L-tyrosine biosynthesis III
APE_0562a PWY-6627 salinosporamide A biosynthesis
APE_0564 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
APE_0569 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
APE_0572 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
APE_0574.1 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
APE_0577 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
APE_0577 PWY-6416 quinate degradation II
APE_0577 PWY-6707 gallate biosynthesis
APE_0579 PWY-6164 3-dehydroquinate biosynthesis I
APE_0581.1 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I
APE_0581.1 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
APE_0581.1 PWY-6164 3-dehydroquinate biosynthesis I
APE_0586.1 PWY-6891 thiazole biosynthesis II (Bacillus)
APE_0586.1 PWY-6892 thiazole biosynthesis I (E. coli)
APE_0586.1 PWY-7560 methylerythritol phosphate pathway II
APE_0603 PWY-6823 molybdenum cofactor biosynthesis
APE_0621.1 PWY-6349 CDP-archaeol biosynthesis
APE_0624.1 PWY-5041 S-adenosyl-L-methionine cycle II
APE_0639.1 PWY-6834 spermidine biosynthesis III
APE_0650.1 PWY-5484 glycolysis II (from fructose 6-phosphate)
APE_0665 PWY-1861 formaldehyde assimilation II (RuMP Cycle)
APE_0665 PWY-5723 Rubisco shunt
APE_0669.1 PWY-6899 base-degraded thiamin salvage
APE_0669.1 PWY-7356 thiamin salvage IV (yeast)
APE_0672.1 PWY-1622 formaldehyde assimilation I (serine pathway)
APE_0672.1 PWY-5392 reductive TCA cycle II
APE_0672.1 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
APE_0672.1 PWY-5690 TCA cycle II (plants and fungi)
APE_0672.1 PWY-5913 TCA cycle VI (obligate autotrophs)
APE_0672.1 PWY-6728 methylaspartate cycle
APE_0672.1 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APE_0672.1 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type
APE_0672.1 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol)
APE_0676 PWY-6654 phosphopantothenate biosynthesis III
APE_0677.1 PWY-6654 phosphopantothenate biosynthesis III
APE_0685 PWY-6689 tRNA splicing
APE_0686 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation
APE_0686 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II
APE_0712.1 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
APE_0712.1 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I
APE_0741 PWY-6854 ethylene biosynthesis III (microbes)
APE_0766 PWY-181 photorespiration
APE_0768.1 PWY-3801 sucrose degradation II (sucrose synthase)
APE_0768.1 PWY-3861 mannitol degradation II
APE_0768.1 PWY-3881 mannitol biosynthesis
APE_0768.1 PWY-5054 sorbitol biosynthesis I
APE_0768.1 PWY-5384 sucrose degradation IV (sucrose phosphorylase)
APE_0768.1 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II
APE_0768.1 PWY-5659 GDP-mannose biosynthesis
APE_0768.1 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
APE_0768.1 PWY-621 sucrose degradation III (sucrose invertase)
APE_0768.1 PWY-622 starch biosynthesis
APE_0768.1 PWY-6531 mannitol cycle
APE_0768.1 PWY-6981 chitin biosynthesis
APE_0768.1 PWY-7238 sucrose biosynthesis II
APE_0768.1 PWY-7347 sucrose biosynthesis III
APE_0768.1 PWY-7385 1,3-propanediol biosynthesis (engineered)
APE_0768.1 PWY-7456 mannan degradation
APE_0768.1 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway)
APE_0781.1 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
APE_0781.1 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
APE_0781.1 PWY-7185 UTP and CTP dephosphorylation I
APE_0781.1 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
APE_0781.1 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
APE_0782.1 PWY-6829 tRNA methylation (yeast)
APE_0793.1 PWY-3781 aerobic respiration I (cytochrome c)
APE_0793.1 PWY-4521 arsenite oxidation I (respiratory)
APE_0793.1 PWY-6692 Fe(II) oxidation
APE_0793.1 PWY-7279 aerobic respiration II (cytochrome c) (yeast)
APE_0798 PWY-6825 phosphatidylcholine biosynthesis V
APE_0801.1 PWY-5381 pyridine nucleotide cycling (plants)
APE_0801.1 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation
APE_0801.1 PWY-6596 adenosine nucleotides degradation I
APE_0801.1 PWY-6606 guanosine nucleotides degradation II
APE_0801.1 PWY-6607 guanosine nucleotides degradation I
APE_0801.1 PWY-6608 guanosine nucleotides degradation III
APE_0801.1 PWY-7185 UTP and CTP dephosphorylation I
APE_0807.1 PWY-6853 ethylene biosynthesis II (microbes)
APE_0815.1 PWY-6829 tRNA methylation (yeast)
APE_0815.1 PWY-7285 methylwyosine biosynthesis
APE_0815.1 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
APE_0816 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
APE_0887.1 PWY-5656 mannosylglycerate biosynthesis I
APE_0889.1 PWY-5656 mannosylglycerate biosynthesis I
APE_0931 PWY-6482 diphthamide biosynthesis (archaea)
APE_0946 PWY-3781 aerobic respiration I (cytochrome c)
APE_0946 PWY-4302 aerobic respiration III (alternative oxidase pathway)
APE_0946 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
APE_0946 PWY-5690 TCA cycle II (plants and fungi)
APE_0946 PWY-6728 methylaspartate cycle
APE_0946 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APE_0946 PWY-7254 TCA cycle VII (acetate-producers)
APE_0946 PWY-7279 aerobic respiration II (cytochrome c) (yeast)
APE_0950.1 PWY-3781 aerobic respiration I (cytochrome c)
APE_0950.1 PWY-4302 aerobic respiration III (alternative oxidase pathway)
APE_0950.1 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
APE_0950.1 PWY-5690 TCA cycle II (plants and fungi)
APE_0950.1 PWY-6728 methylaspartate cycle
APE_0950.1 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APE_0950.1 PWY-7254 TCA cycle VII (acetate-producers)
APE_0950.1 PWY-7279 aerobic respiration II (cytochrome c) (yeast)
APE_0952.1 PWY-5686 UMP biosynthesis
APE_0954 PWY-6167 flavin biosynthesis II (archaea)
APE_0978.1 PWY-7205 CMP phosphorylation
APE_0979.1 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation
APE_0981.1 PWY-7219 adenosine ribonucleotides de novo biosynthesis
APE_0986.1 PWY-6167 flavin biosynthesis II (archaea)
APE_0986.1 PWY-6168 flavin biosynthesis III (fungi)
APE_0988 PWY-6167 flavin biosynthesis II (archaea)
APE_0988 PWY-6168 flavin biosynthesis III (fungi)
APE_1038.1 PWY-6556 pyrimidine ribonucleosides salvage II
APE_1038.1 PWY-7181 pyrimidine deoxyribonucleosides degradation
APE_1038.1 PWY-7193 pyrimidine ribonucleosides salvage I
APE_1038.1 PWY-7199 pyrimidine deoxyribonucleosides salvage
APE_1047.1 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation
APE_1047.1 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II
APE_1059 PWY-7285 methylwyosine biosynthesis
APE_1059 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
APE_1065.1 PWY-5392 reductive TCA cycle II
APE_1065.1 PWY-5537 pyruvate fermentation to acetate V
APE_1065.1 PWY-5538 pyruvate fermentation to acetate VI
APE_1065.1 PWY-5690 TCA cycle II (plants and fungi)
APE_1065.1 PWY-5913 TCA cycle VI (obligate autotrophs)
APE_1065.1 PWY-6728 methylaspartate cycle
APE_1065.1 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APE_1065.1 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial)
APE_1072.1 PWY-5392 reductive TCA cycle II
APE_1072.1 PWY-5537 pyruvate fermentation to acetate V
APE_1072.1 PWY-5538 pyruvate fermentation to acetate VI
APE_1072.1 PWY-5690 TCA cycle II (plants and fungi)
APE_1072.1 PWY-5913 TCA cycle VI (obligate autotrophs)
APE_1072.1 PWY-6728 methylaspartate cycle
APE_1072.1 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APE_1072.1 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial)
APE_1104.1 PWY-5083 NAD/NADH phosphorylation and dephosphorylation
APE_1104.1 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APE_1104.1 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
APE_1106.1 PWY-6829 tRNA methylation (yeast)
APE_1106.1 PWY-7285 methylwyosine biosynthesis
APE_1106.1 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
APE_1138.1 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation
APE_1140.1 PWY-2941 L-lysine biosynthesis II
APE_1140.1 PWY-2942 L-lysine biosynthesis III
APE_1140.1 PWY-5097 L-lysine biosynthesis VI
APE_1140.1 PWY-6559 spermidine biosynthesis II
APE_1140.1 PWY-6562 norspermidine biosynthesis
APE_1140.1 PWY-7153 grixazone biosynthesis
APE_1143 PWY-2941 L-lysine biosynthesis II
APE_1143 PWY-2942 L-lysine biosynthesis III
APE_1143 PWY-5097 L-lysine biosynthesis VI
APE_1143 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
APE_1143 PWY-6559 spermidine biosynthesis II
APE_1143 PWY-6562 norspermidine biosynthesis
APE_1143 PWY-7153 grixazone biosynthesis
APE_1143 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
APE_1180 PWY-3221 dTDP-L-rhamnose biosynthesis II
APE_1180 PWY-6808 dTDP-D-forosamine biosynthesis
APE_1180 PWY-6942 dTDP-D-desosamine biosynthesis
APE_1180 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis
APE_1180 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
APE_1180 PWY-6974 dTDP-L-olivose biosynthesis
APE_1180 PWY-6976 dTDP-L-mycarose biosynthesis
APE_1180 PWY-7104 dTDP-L-megosamine biosynthesis
APE_1180 PWY-7301 dTDP-β-L-noviose biosynthesis
APE_1180 PWY-7312 dTDP-D-β-fucofuranose biosynthesis
APE_1180 PWY-7315 dTDP-N-acetylthomosamine biosynthesis
APE_1180 PWY-7316 dTDP-N-acetylviosamine biosynthesis
APE_1180 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis
APE_1180 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis
APE_1180 PWY-7414 dTDP-α-D-mycaminose biosynthesis
APE_1180 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis
APE_1195.1 PWY-5340 sulfate activation for sulfonation
APE_1197.1 PWY-5278 sulfite oxidation III
APE_1197.1 PWY-5340 sulfate activation for sulfonation
APE_1197.1 PWY-6683 sulfate reduction III (assimilatory)
APE_1197.1 PWY-6932 selenate reduction
APE_1202.1 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II
APE_1205.1 PWY-6749 CMP-legionaminate biosynthesis I
APE_1273.1 PWY-5381 pyridine nucleotide cycling (plants)
APE_1365.1 PWY-6167 flavin biosynthesis II (archaea)
APE_1366.1 PWY-6167 flavin biosynthesis II (archaea)
APE_1366.1 PWY-6168 flavin biosynthesis III (fungi)
APE_1404.1 PWY-6163 chorismate biosynthesis from 3-dehydroquinate
APE_1461.1 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
APE_1461.1 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
APE_1462 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline)
APE_1462 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
APE_1470.1 PWY-6703 preQ0 biosynthesis
APE_1471.1 PWY-6700 queuosine biosynthesis
APE_1484.1 PWY-1361 benzoyl-CoA degradation I (aerobic)
APE_1484.1 PWY-5109 2-methylbutanoate biosynthesis
APE_1484.1 PWY-5136 fatty acid β-oxidation II (peroxisome)
APE_1484.1 PWY-5138 unsaturated, even numbered fatty acid β-oxidation
APE_1484.1 PWY-5177 glutaryl-CoA degradation
APE_1484.1 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle
APE_1484.1 PWY-6435 4-hydroxybenzoate biosynthesis V
APE_1484.1 PWY-6583 pyruvate fermentation to butanol I
APE_1484.1 PWY-6863 pyruvate fermentation to hexanol
APE_1484.1 PWY-6883 pyruvate fermentation to butanol II
APE_1484.1 PWY-6944 androstenedione degradation
APE_1484.1 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase)
APE_1484.1 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APE_1484.1 PWY-7007 methyl ketone biosynthesis
APE_1484.1 PWY-7046 4-coumarate degradation (anaerobic)
APE_1484.1 PWY-7094 fatty acid salvage
APE_1484.1 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis
APE_1484.1 PWY-735 jasmonic acid biosynthesis
APE_1484.1 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate)
APE_1491.1 PWY-5194 siroheme biosynthesis
APE_1491.1 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion)
APE_1493 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
APE_1493 PWY-5189 tetrapyrrole biosynthesis II (from glycine)
APE_1507.1 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation
APE_1507.1 PWY-6596 adenosine nucleotides degradation I
APE_1507.1 PWY-7221 guanosine ribonucleotides de novo biosynthesis
APE_1512 PWY-6148 tetrahydromethanopterin biosynthesis
APE_1517 PWY-2301 myo-inositol biosynthesis
APE_1517 PWY-4661 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)
APE_1517 PWY-6372 1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)
APE_1517 PWY-6580 phosphatidylinositol biosynthesis I (bacteria)
APE_1517 PWY-6664 di-myo-inositol phosphate biosynthesis
APE_1538.1 PWY-1042 glycolysis IV (plant cytosol)
APE_1538.1 PWY-5484 glycolysis II (from fructose 6-phosphate)
APE_1538.1 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
APE_1538.1 PWY-7003 glycerol degradation to butanol
APE_1596 PWY-5041 S-adenosyl-L-methionine cycle II
APE_1596 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis
APE_1604 PWY-7176 UTP and CTP de novo biosynthesis
APE_1604 PWY-7177 UTP and CTP dephosphorylation II
APE_1604 PWY-7185 UTP and CTP dephosphorylation I
APE_1616.1 PWY-1042 glycolysis IV (plant cytosol)
APE_1616.1 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
APE_1616.1 PWY-5484 glycolysis II (from fructose 6-phosphate)
APE_1616.1 PWY-5723 Rubisco shunt
APE_1616.1 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
APE_1616.1 PWY-6886 1-butanol autotrophic biosynthesis
APE_1616.1 PWY-6901 superpathway of glucose and xylose degradation
APE_1616.1 PWY-7003 glycerol degradation to butanol
APE_1616.1 PWY-7124 ethylene biosynthesis V (engineered)
APE_1616.1 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APE_1623 PWY-3781 aerobic respiration I (cytochrome c)
APE_1623 PWY-4521 arsenite oxidation I (respiratory)
APE_1623 PWY-6692 Fe(II) oxidation
APE_1623 PWY-7279 aerobic respiration II (cytochrome c) (yeast)
APE_1637.1 PWY-40 putrescine biosynthesis I
APE_1637.1 PWY-6305 putrescine biosynthesis IV
APE_1646.1 PWY-6689 tRNA splicing
APE_1663.1 PWY-5686 UMP biosynthesis
APE_1669.1 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA
APE_1669.1 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA
APE_1687 PWY-5743 3-hydroxypropanoate cycle
APE_1687 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle
APE_1687 PWY-6728 methylaspartate cycle
APE_1687 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial)
APE_1715.1 PWY-5796 malonate decarboxylase activation
APE_1717.1 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation
APE_1765.1 PWY-5123 trans, trans-farnesyl diphosphate biosynthesis
APE_1765.1 PWY-6174 mevalonate pathway II (archaea)
APE_1765.1 PWY-6383 mono-trans, poly-cis decaprenyl phosphate biosynthesis
APE_1765.1 PWY-6859 all-trans-farnesol biosynthesis
APE_1765.1 PWY-7102 bisabolene biosynthesis
APE_1765.1 PWY-7391 isoprene biosynthesis II (engineered)
APE_1765.1 PWY-7524 mevalonate pathway III (archaea)
APE_1765.1 PWY-7560 methylerythritol phosphate pathway II
APE_1765.1 PWY-922 mevalonate pathway I
APE_1768.1 PWY-6174 mevalonate pathway II (archaea)
APE_1768.1 PWY-7524 mevalonate pathway III (archaea)
APE_1816.1 PWY-5392 reductive TCA cycle II
APE_1816.1 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation
APE_1816.1 PWY-5690 TCA cycle II (plants and fungi)
APE_1816.1 PWY-5913 TCA cycle VI (obligate autotrophs)
APE_1816.1 PWY-6728 methylaspartate cycle
APE_1816.1 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APE_1816.1 PWY-7254 TCA cycle VII (acetate-producers)
APE_1816.1 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial)
APE_1825.1 PWY-5083 NAD/NADH phosphorylation and dephosphorylation
APE_1825.1 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APE_1825.1 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
APE_1831.1 PWY-7294 xylose degradation IV
APE_1831.1 PWY-7295 L-arabinose degradation IV
APE_1869 PWY-6174 mevalonate pathway II (archaea)
APE_1869 PWY-7391 isoprene biosynthesis II (engineered)
APE_1869 PWY-7524 mevalonate pathway III (archaea)
APE_1869 PWY-922 mevalonate pathway I
APE_1873.1 PWY-4381 fatty acid biosynthesis initiation I
APE_1939.1 PWY-6654 phosphopantothenate biosynthesis III
APE_1962.1 PWY-1622 formaldehyde assimilation I (serine pathway)
APE_1962.1 PWY-181 photorespiration
APE_1962.1 PWY-2161 folate polyglutamylation
APE_1962.1 PWY-2201 folate transformations I
APE_1962.1 PWY-3661 glycine betaine degradation I
APE_1962.1 PWY-3661-1 glycine betaine degradation II (mammalian)
APE_1962.1 PWY-3841 folate transformations II
APE_1962.1 PWY-5497 purine nucleobases degradation II (anaerobic)
APE_1976.1 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes)
APE_1992.1 PWY-4981 L-proline biosynthesis II (from arginine)
APE_1992.1 PWY-4984 urea cycle
APE_1992.1 PWY-7400 L-arginine biosynthesis IV (archaebacteria)
APE_2017 PWY-6700 queuosine biosynthesis
APE_2017 PWY-6711 archaeosine biosynthesis
APE_2020 PWY-6711 archaeosine biosynthesis
APE_2029.1 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II
APE_2029.1 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I
APE_2029.1 PWY-6269 adenosylcobalamin salvage from cobinamide II
APE_2037.1 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II
APE_2037.1 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I
APE_2037.1 PWY-6269 adenosylcobalamin salvage from cobinamide II
APE_2042.1 PWY-6482 diphthamide biosynthesis (archaea)
APE_2042.1 PWY-7546 diphthamide biosynthesis (eukaryotes)
APE_2048 PWY-5041 S-adenosyl-L-methionine cycle II
APE_2048 PWY-6151 S-adenosyl-L-methionine cycle I
APE_2048 PWY-6936 seleno-amino acid biosynthesis
APE_2048 PWY-702 L-methionine biosynthesis II
APE_2050.1 PWY-5041 S-adenosyl-L-methionine cycle II
APE_2050.1 PWY-6151 S-adenosyl-L-methionine cycle I
APE_2050.1 PWY-6936 seleno-amino acid biosynthesis
APE_2050.1 PWY-702 L-methionine biosynthesis II
APE_2062.1 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
APE_2062.1 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
APE_2062.1 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
APE_2062.1 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
APE_2062.1 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II
APE_2062.1 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II
APE_2062.1 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I
APE_2062.1 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis
APE_2064.1 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
APE_2067.1 PWY-702 L-methionine biosynthesis II
APE_2090 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
APE_2090 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
APE_2090 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
APE_2090 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation
APE_2090 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
APE_2090 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
APE_2105.1 PWY-4202 arsenate detoxification I (glutaredoxin)
APE_2105.1 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation
APE_2105.1 PWY-6608 guanosine nucleotides degradation III
APE_2105.1 PWY-6609 adenine and adenosine salvage III
APE_2105.1 PWY-6611 adenine and adenosine salvage V
APE_2105.1 PWY-6620 guanine and guanosine salvage
APE_2105.1 PWY-6627 salinosporamide A biosynthesis
APE_2105.1 PWY-6644 fluoroacetate and fluorothreonine biosynthesis
APE_2105.1 PWY-7179 purine deoxyribonucleosides degradation I
APE_2105.1 PWY-7179-1 purine deoxyribonucleosides degradation
APE_2112.1 PWY-6167 flavin biosynthesis II (archaea)
APE_2142.1 PWY-381 nitrate reduction II (assimilatory)
APE_2142.1 PWY-5675 nitrate reduction V (assimilatory)
APE_2142.1 PWY-6549 L-glutamine biosynthesis III
APE_2142.1 PWY-6963 ammonia assimilation cycle I
APE_2142.1 PWY-6964 ammonia assimilation cycle II
APE_2149.1 PWY-5532 adenosine nucleotides degradation IV
APE_2296 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
APE_2298.1 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
APE_2298.1 PWY-5189 tetrapyrrole biosynthesis II (from glycine)
APE_2299.1 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
APE_2300.1 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
APE_2300.1 PWY-5189 tetrapyrrole biosynthesis II (from glycine)
APE_2308 PWY-5663 tetrahydrobiopterin biosynthesis I
APE_2308 PWY-5664 tetrahydrobiopterin biosynthesis II
APE_2308 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APE_2308 PWY-6703 preQ0 biosynthesis
APE_2308 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
APE_2308 PWY-6983 tetrahydrobiopterin biosynthesis III
APE_2308 PWY-7442 drosopterin and aurodrosopterin biosynthesis
APE_2317.1 PWY-5188 tetrapyrrole biosynthesis I (from glutamate)
APE_2341 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus)
APE_2341 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
APE_2342.1 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus)
APE_2342.1 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
APE_2344.1 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus)
APE_2344.1 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
APE_2344.1 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
APE_2348 PWY-5686 UMP biosynthesis
APE_2349.1 PWY-5686 UMP biosynthesis
APE_2362.1 PWY-6938 NADH repair
APE_2377 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III
APE_2377 PWY-7176 UTP and CTP de novo biosynthesis
APE_2377 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I
APE_2377 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II
APE_2377 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation
APE_2377 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV
APE_2377 PWY-7205 CMP phosphorylation
APE_2377 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP
APE_2377 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II
APE_2377 PWY-7221 guanosine ribonucleotides de novo biosynthesis
APE_2377 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II
APE_2377 PWY-7224 purine deoxyribonucleosides salvage
APE_2377 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I
APE_2377 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis
APE_2400.1 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus)
APE_2400.1 PWY-6894 thiamin diphosphate biosynthesis I (E. coli)
APE_2400.1 PWY-6897 thiamin salvage II
APE_2400.1 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus)
APE_2400.1 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes)
APE_2400.1 PWY-6910 hydroxymethylpyrimidine salvage
APE_2400.1 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast)
APE_2400.1 PWY-7356 thiamin salvage IV (yeast)
APE_2400.1 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast)
APE_2423 PWY-6832 2-aminoethylphosphonate degradation II
APE_2425 PWY-6148 tetrahydromethanopterin biosynthesis
APE_2433.1 PWY-6749 CMP-legionaminate biosynthesis I
APE_2437.1 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation
APE_2439 PWY-3821 galactose degradation III
APE_2439 PWY-6174 mevalonate pathway II (archaea)
APE_2439 PWY-6317 galactose degradation I (Leloir pathway)
APE_2439 PWY-6527 stachyose degradation
APE_2439 PWY-7391 isoprene biosynthesis II (engineered)
APE_2439 PWY-922 mevalonate pathway I
APE_2450.1 PWY-5988 wound-induced proteolysis I
APE_2450.1 PWY-6018 seed germination protein turnover
APE_2452 PWY-7221 guanosine ribonucleotides de novo biosynthesis
APE_2458 PWY-1042 glycolysis IV (plant cytosol)
APE_2458 PWY-1622 formaldehyde assimilation I (serine pathway)
APE_2458 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative)
APE_2458 PWY-5484 glycolysis II (from fructose 6-phosphate)
APE_2458 PWY-5723 Rubisco shunt
APE_2458 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum)
APE_2458 PWY-6886 1-butanol autotrophic biosynthesis
APE_2458 PWY-6901 superpathway of glucose and xylose degradation
APE_2458 PWY-7003 glycerol degradation to butanol
APE_2458 PWY-7124 ethylene biosynthesis V (engineered)
APE_2458 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APE_2486.1 PWY-6829 tRNA methylation (yeast)
APE_2520.1 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APE_2520.1 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)
APE_2553.1 PWY-5958 acridone alkaloid biosynthesis
APE_2553.1 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis
APE_2553.1 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis
APE_2555 PWY-5958 acridone alkaloid biosynthesis
APE_2555 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis
APE_2555 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis
APE_2556.1 PWY-7429 arsenite oxidation II (respiratory)
APE_2563 PWY-7429 arsenite oxidation II (respiratory)
APE_2595.1 PWY-5350 thiosulfate disproportionation III (rhodanese)
APE_2598 PWY-6823 molybdenum cofactor biosynthesis
APE_2601.1 PWY-4981 L-proline biosynthesis II (from arginine)
APE_2604 PWY-6672 cis-genanyl-CoA degradation
APE_2604 PWY-7118 chitin degradation to ethanol