Atu0003 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Atu0020 PWY-4381 fatty acid biosynthesis initiation I Atu0020 PWY-5743 3-hydroxypropanoate cycle Atu0020 PWY-5744 glyoxylate assimilation Atu0020 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Atu0020 PWY-6679 jadomycin biosynthesis Atu0020 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Atu0021 PWY-2161 folate polyglutamylation Atu0029 PWY-5041 S-adenosyl-L-methionine cycle II Atu0035 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Atu0035 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Atu0037 PWY-3961 phosphopantothenate biosynthesis II Atu0047 PWY-6728 methylaspartate cycle Atu0047 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu0047 PWY-7118 chitin degradation to ethanol Atu0047 PWY-7294 xylose degradation IV Atu0047 PWY-7295 L-arabinose degradation IV Atu0070 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Atu0070 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Atu0070 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Atu0070 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Atu0070 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Atu0070 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Atu0070 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Atu0070 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Atu0071 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Atu0071 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Atu0071 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Atu0071 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Atu0071 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Atu0071 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Atu0071 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Atu0071 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Atu0098 PWY-5381 pyridine nucleotide cycling (plants) Atu0099 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Atu0100 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Atu0100 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Atu0130 PWY-6556 pyrimidine ribonucleosides salvage II Atu0130 PWY-7181 pyrimidine deoxyribonucleosides degradation Atu0130 PWY-7193 pyrimidine ribonucleosides salvage I Atu0130 PWY-7199 pyrimidine deoxyribonucleosides salvage Atu0131 PWY-4202 arsenate detoxification I (glutaredoxin) Atu0131 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Atu0131 PWY-6608 guanosine nucleotides degradation III Atu0131 PWY-6609 adenine and adenosine salvage III Atu0131 PWY-6611 adenine and adenosine salvage V Atu0131 PWY-6620 guanine and guanosine salvage Atu0131 PWY-6627 salinosporamide A biosynthesis Atu0131 PWY-6644 fluoroacetate and fluorothreonine biosynthesis Atu0131 PWY-7179 purine deoxyribonucleosides degradation I Atu0131 PWY-7179-1 purine deoxyribonucleosides degradation Atu0132 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Atu0133 PWY-7181 pyrimidine deoxyribonucleosides degradation Atu0135 PWY-7183 pyrimidine nucleobases salvage I Atu0136 PWY-6610 adenine and adenosine salvage IV Atu0137 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Atu0141 PWY-3781 aerobic respiration I (cytochrome c) Atu0141 PWY-4521 arsenite oxidation I (respiratory) Atu0141 PWY-6692 Fe(II) oxidation Atu0141 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Atu0141 PWY-7544 pyruvate to cytochrome bo oxidase electron transfer Atu0146 PWY-6683 sulfate reduction III (assimilatory) Atu0149 PWY-5971 palmitate biosynthesis II (bacteria and plants) Atu0149 PWY-5973 cis-vaccenate biosynthesis Atu0149 PWY-5989 stearate biosynthesis II (bacteria and plants) Atu0149 PWY-6113 superpathway of mycolate biosynthesis Atu0149 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Atu0149 PWY-6519 8-amino-7-oxononanoate biosynthesis I Atu0149 PWY-7096 triclosan resistance Atu0149 PWYG-321 mycolate biosynthesis Atu0151 PWY-5971 palmitate biosynthesis II (bacteria and plants) Atu0151 PWY-5973 cis-vaccenate biosynthesis Atu0151 PWY-5989 stearate biosynthesis II (bacteria and plants) Atu0151 PWY-5994 palmitate biosynthesis I (animals and fungi) Atu0151 PWY-6113 superpathway of mycolate biosynthesis Atu0151 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Atu0151 PWY-6519 8-amino-7-oxononanoate biosynthesis I Atu0151 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Atu0151 PWYG-321 mycolate biosynthesis Atu0168 PWY-5532 adenosine nucleotides degradation IV Atu0169 PWY-7399 methylphosphonate degradation II Atu0170 PWY-5532 adenosine nucleotides degradation IV Atu0176 PWY-7399 methylphosphonate degradation II Atu0178 PWY-7399 methylphosphonate degradation II Atu0181 PWY-7399 methylphosphonate degradation II Atu0183 PWY-2941 L-lysine biosynthesis II Atu0183 PWY-2942 L-lysine biosynthesis III Atu0183 PWY-5097 L-lysine biosynthesis VI Atu0184 PWY-2723 trehalose degradation V Atu0184 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Atu0184 PWY-5661 GDP-glucose biosynthesis Atu0184 PWY-7238 sucrose biosynthesis II Atu0184 PWY-7385 1,3-propanediol biosynthesis (engineered) Atu0193 PWY-381 nitrate reduction II (assimilatory) Atu0193 PWY-5675 nitrate reduction V (assimilatory) Atu0193 PWY-6549 L-glutamine biosynthesis III Atu0193 PWY-6963 ammonia assimilation cycle I Atu0193 PWY-6964 ammonia assimilation cycle II Atu0195 PWY-5530 sorbitol biosynthesis II Atu0195 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Atu0205 PWY-5642 2,4-dinitrotoluene degradation Atu0205 PWY-6373 acrylate degradation Atu0213 PWY-5381 pyridine nucleotide cycling (plants) Atu0214 PWY-5988 wound-induced proteolysis I Atu0214 PWY-6018 seed germination protein turnover Atu0281 PWY-7221 guanosine ribonucleotides de novo biosynthesis Atu0298 PWY-5686 UMP biosynthesis Atu0309 PWY-5692 allantoin degradation to glyoxylate II Atu0309 PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) Atu0312 PWY-6936 seleno-amino acid biosynthesis Atu0314 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Atu0314 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Atu0314 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Atu0314 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Atu0320 PWY-5839 menaquinol-7 biosynthesis Atu0320 PWY-5844 menaquinol-9 biosynthesis Atu0320 PWY-5849 menaquinol-6 biosynthesis Atu0320 PWY-5890 menaquinol-10 biosynthesis Atu0320 PWY-5891 menaquinol-11 biosynthesis Atu0320 PWY-5892 menaquinol-12 biosynthesis Atu0320 PWY-5895 menaquinol-13 biosynthesis Atu0326 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Atu0362 PWY-5041 S-adenosyl-L-methionine cycle II Atu0362 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Atu0380 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Atu0380 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Atu0399 PWY-5686 UMP biosynthesis Atu0400 PWY-5686 UMP biosynthesis Atu0404 PWY-3801 sucrose degradation II (sucrose synthase) Atu0404 PWY-5054 sorbitol biosynthesis I Atu0404 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Atu0404 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Atu0404 PWY-5659 GDP-mannose biosynthesis Atu0404 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Atu0404 PWY-621 sucrose degradation III (sucrose invertase) Atu0404 PWY-622 starch biosynthesis Atu0404 PWY-6531 mannitol cycle Atu0404 PWY-6981 chitin biosynthesis Atu0404 PWY-7238 sucrose biosynthesis II Atu0404 PWY-7347 sucrose biosynthesis III Atu0404 PWY-7385 1,3-propanediol biosynthesis (engineered) Atu0415 PWY-723 alkylnitronates degradation Atu0429 PWY-4981 L-proline biosynthesis II (from arginine) Atu0429 PWY-4984 urea cycle Atu0429 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Atu0434 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Atu0486 PWY-5686 UMP biosynthesis Atu0503 PWY-1361 benzoyl-CoA degradation I (aerobic) Atu0503 PWY-5109 2-methylbutanoate biosynthesis Atu0503 PWY-5136 fatty acid β-oxidation II (peroxisome) Atu0503 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Atu0503 PWY-5177 glutaryl-CoA degradation Atu0503 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Atu0503 PWY-6435 4-hydroxybenzoate biosynthesis V Atu0503 PWY-6583 pyruvate fermentation to butanol I Atu0503 PWY-6863 pyruvate fermentation to hexanol Atu0503 PWY-6883 pyruvate fermentation to butanol II Atu0503 PWY-6944 androstenedione degradation Atu0503 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Atu0503 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Atu0503 PWY-7007 methyl ketone biosynthesis Atu0503 PWY-7046 4-coumarate degradation (anaerobic) Atu0503 PWY-7094 fatty acid salvage Atu0503 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Atu0503 PWY-735 jasmonic acid biosynthesis Atu0503 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Atu0530 PWY-3821 galactose degradation III Atu0530 PWY-6317 galactose degradation I (Leloir pathway) Atu0530 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Atu0530 PWY-6527 stachyose degradation Atu0530 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Atu0530 PWY-7344 UDP-D-galactose biosynthesis Atu0539 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu0539 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu0557 PWY-7219 adenosine ribonucleotides de novo biosynthesis Atu0589 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Atu0589 PWY-2201 folate transformations I Atu0589 PWY-3841 folate transformations II Atu0589 PWY-5030 L-histidine degradation III Atu0589 PWY-5497 purine nucleobases degradation II (anaerobic) Atu0589 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Atu0598 PWY-5101 L-isoleucine biosynthesis II Atu0598 PWY-5103 L-isoleucine biosynthesis III Atu0598 PWY-5104 L-isoleucine biosynthesis IV Atu0598 PWY-7111 pyruvate fermentation to isobutanol (engineered) Atu0599 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Atu0599 PWY-6855 chitin degradation I (archaea) Atu0599 PWY-6906 chitin derivatives degradation Atu0600 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Atu0602 PWY-381 nitrate reduction II (assimilatory) Atu0602 PWY-5675 nitrate reduction V (assimilatory) Atu0602 PWY-6549 L-glutamine biosynthesis III Atu0602 PWY-6963 ammonia assimilation cycle I Atu0602 PWY-6964 ammonia assimilation cycle II Atu0607 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu0624 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Atu0624 PWY-6596 adenosine nucleotides degradation I Atu0624 PWY-7221 guanosine ribonucleotides de novo biosynthesis Atu0632 PWY-7560 methylerythritol phosphate pathway II Atu0642 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Atu0647 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Atu0647 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Atu0647 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Atu0656 PWY-6840 homoglutathione biosynthesis Atu0656 PWY-7255 ergothioneine biosynthesis I (bacteria) Atu0665 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu0665 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu0666 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu0666 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu0685 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Atu0685 PWY-6167 flavin biosynthesis II (archaea) Atu0685 PWY-6168 flavin biosynthesis III (fungi) Atu0703 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Atu0703 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation Atu0703 PWY-7242 D-fructuronate degradation Atu0703 PWY-7310 D-glucosaminate degradation Atu0704 PWY-7130 L-glucose degradation Atu0718 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Atu0718 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Atu0723 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu0723 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu0745 PWY-6891 thiazole biosynthesis II (Bacillus) Atu0745 PWY-6892 thiazole biosynthesis I (E. coli) Atu0745 PWY-7560 methylerythritol phosphate pathway II Atu0753 PWY-6167 flavin biosynthesis II (archaea) Atu0753 PWY-6168 flavin biosynthesis III (fungi) Atu0753 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Atu0754 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Atu0757 PWY-5971 palmitate biosynthesis II (bacteria and plants) Atu0757 PWY-5973 cis-vaccenate biosynthesis Atu0757 PWY-5989 stearate biosynthesis II (bacteria and plants) Atu0757 PWY-6113 superpathway of mycolate biosynthesis Atu0757 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Atu0757 PWY-6519 8-amino-7-oxononanoate biosynthesis I Atu0757 PWY-7096 triclosan resistance Atu0757 PWYG-321 mycolate biosynthesis Atu0760 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Atu0760 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Atu0768 PWY-3781 aerobic respiration I (cytochrome c) Atu0768 PWY-4521 arsenite oxidation I (respiratory) Atu0768 PWY-6692 Fe(II) oxidation Atu0768 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Atu0774 PWY-7560 methylerythritol phosphate pathway II Atu0775 PWY-702 L-methionine biosynthesis II Atu0803 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Atu0803 PWY-6549 L-glutamine biosynthesis III Atu0803 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Atu0803 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Atu0811 PWY-7254 TCA cycle VII (acetate-producers) Atu0816 PWY-5278 sulfite oxidation III Atu0816 PWY-5340 sulfate activation for sulfonation Atu0816 PWY-6683 sulfate reduction III (assimilatory) Atu0816 PWY-6932 selenate reduction Atu0817 PWY-5278 sulfite oxidation III Atu0817 PWY-5340 sulfate activation for sulfonation Atu0817 PWY-6683 sulfate reduction III (assimilatory) Atu0817 PWY-6932 selenate reduction Atu0829 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Atu0829 PWY-7494 choline degradation IV Atu0830 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Atu0830 PWY-7494 choline degradation IV Atu0876 PWY-6854 ethylene biosynthesis III (microbes) Atu0903 PWY-5386 methylglyoxal degradation I Atu0944 PWY-621 sucrose degradation III (sucrose invertase) Atu1001 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Atu1001 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Atu1001 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Atu1006 PWY-6617 adenosine nucleotides degradation III Atu1024 PWY-2941 L-lysine biosynthesis II Atu1024 PWY-2942 L-lysine biosynthesis III Atu1024 PWY-5097 L-lysine biosynthesis VI Atu1033 PWY-6012 acyl carrier protein metabolism I Atu1033 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Atu1062 PWY-5669 phosphatidylethanolamine biosynthesis I Atu1063 PWY-5669 phosphatidylethanolamine biosynthesis I Atu1070 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Atu1071 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Atu1075 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Atu1075 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Atu1075 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Atu1075 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Atu1080 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Atu1094 PWY-4381 fatty acid biosynthesis initiation I Atu1094 PWY-6799 fatty acid biosynthesis (plant mitochondria) Atu1094 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Atu1095 PWY-5367 petroselinate biosynthesis Atu1095 PWY-5971 palmitate biosynthesis II (bacteria and plants) Atu1095 PWY-5973 cis-vaccenate biosynthesis Atu1095 PWY-5989 stearate biosynthesis II (bacteria and plants) Atu1095 PWY-5994 palmitate biosynthesis I (animals and fungi) Atu1095 PWY-6113 superpathway of mycolate biosynthesis Atu1095 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Atu1095 PWY-6519 8-amino-7-oxononanoate biosynthesis I Atu1095 PWY-6951 Atu1095 Atu1095 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Atu1095 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Atu1095 PWYG-321 mycolate biosynthesis Atu1101 PWY-7221 guanosine ribonucleotides de novo biosynthesis Atu1110 PWY-5988 wound-induced proteolysis I Atu1110 PWY-6018 seed germination protein turnover Atu1122 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Atu1122 PWY-7176 UTP and CTP de novo biosynthesis Atu1122 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Atu1122 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Atu1122 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Atu1122 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Atu1122 PWY-7205 CMP phosphorylation Atu1122 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Atu1122 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Atu1122 PWY-7221 guanosine ribonucleotides de novo biosynthesis Atu1122 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Atu1122 PWY-7224 purine deoxyribonucleosides salvage Atu1122 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Atu1122 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Atu1126 PWY-6823 molybdenum cofactor biosynthesis Atu1128 PWY-5269 cardiolipin biosynthesis II Atu1128 PWY-5668 cardiolipin biosynthesis I Atu1140 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Atu1140 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Atu1141 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Atu1141 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Atu1141 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Atu1161 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Atu1161 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Atu1165 PWY-1622 formaldehyde assimilation I (serine pathway) Atu1165 PWY-181 photorespiration Atu1165 PWY-2161 folate polyglutamylation Atu1165 PWY-2201 folate transformations I Atu1165 PWY-3661 glycine betaine degradation I Atu1165 PWY-3661-1 glycine betaine degradation II (mammalian) Atu1165 PWY-3841 folate transformations II Atu1165 PWY-5497 purine nucleobases degradation II (anaerobic) Atu1169 PWY-6167 flavin biosynthesis II (archaea) Atu1169 PWY-6168 flavin biosynthesis III (fungi) Atu1169 PWY-7219 adenosine ribonucleotides de novo biosynthesis Atu1171 PWY-6167 flavin biosynthesis II (archaea) Atu1171 PWY-6168 flavin biosynthesis III (fungi) Atu1179 PWY-4381 fatty acid biosynthesis initiation I Atu1215 PWY-5350 thiosulfate disproportionation III (rhodanese) Atu1236 PWY-6655 xanthan biosynthesis Atu1236 PWY-6658 acetan biosynthesis Atu1244 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Atu1244 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Atu1245 PWY-40 putrescine biosynthesis I Atu1245 PWY-6305 putrescine biosynthesis IV Atu1251 PWY-5344 L-homocysteine biosynthesis Atu1251 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Atu1253 PWY-5692 allantoin degradation to glyoxylate II Atu1253 PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) Atu1271 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Atu1281 PWY-3781 aerobic respiration I (cytochrome c) Atu1281 PWY-4302 aerobic respiration III (alternative oxidase pathway) Atu1281 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Atu1281 PWY-6692 Fe(II) oxidation Atu1282 PWY-3781 aerobic respiration I (cytochrome c) Atu1282 PWY-4302 aerobic respiration III (alternative oxidase pathway) Atu1282 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Atu1282 PWY-6692 Fe(II) oxidation Atu1284 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Atu1284 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Atu1307 PWY-5686 UMP biosynthesis Atu1308 PWY-5686 UMP biosynthesis Atu1319 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Atu1332 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Atu1332 PWY-6416 quinate degradation II Atu1332 PWY-6707 gallate biosynthesis Atu1345 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Atu1345 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Atu1345 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Atu1352 PWY-6614 tetrahydrofolate biosynthesis Atu1353 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Atu1353 PWY-6148 tetrahydromethanopterin biosynthesis Atu1353 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Atu1353 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Atu1354 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Atu1354 PWY-6148 tetrahydromethanopterin biosynthesis Atu1354 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Atu1354 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Atu1383 PWY-5971 palmitate biosynthesis II (bacteria and plants) Atu1383 PWY-5973 cis-vaccenate biosynthesis Atu1383 PWY-5989 stearate biosynthesis II (bacteria and plants) Atu1383 PWY-5994 palmitate biosynthesis I (animals and fungi) Atu1383 PWY-6113 superpathway of mycolate biosynthesis Atu1383 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Atu1383 PWY-6519 8-amino-7-oxononanoate biosynthesis I Atu1383 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Atu1383 PWYG-321 mycolate biosynthesis Atu1400 PWY-5041 S-adenosyl-L-methionine cycle II Atu1409 PWY-5694 allantoin degradation to glyoxylate I Atu1409 PWY-5705 allantoin degradation to glyoxylate III Atu1424 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Atu1424 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Atu1426 PWY-1042 glycolysis IV (plant cytosol) Atu1426 PWY-1622 formaldehyde assimilation I (serine pathway) Atu1426 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Atu1426 PWY-5484 glycolysis II (from fructose 6-phosphate) Atu1426 PWY-5723 Rubisco shunt Atu1426 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Atu1426 PWY-6886 1-butanol autotrophic biosynthesis Atu1426 PWY-6901 superpathway of glucose and xylose degradation Atu1426 PWY-7003 glycerol degradation to butanol Atu1426 PWY-7124 ethylene biosynthesis V (engineered) Atu1426 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Atu1434 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Atu1434 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Atu1436 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Atu1436 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Atu1436 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Atu1443 PWY-7560 methylerythritol phosphate pathway II Atu1454 PWY-5194 siroheme biosynthesis Atu1454 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Atu1456 PWY-6683 sulfate reduction III (assimilatory) Atu1476 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Atu1490 PWY-4202 arsenate detoxification I (glutaredoxin) Atu1490 PWY-4621 arsenate detoxification II (glutaredoxin) Atu1498 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Atu1498 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Atu1498 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Atu1498 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Atu1498 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Atu1498 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Atu1499 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Atu1499 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Atu1536 PWY-3781 aerobic respiration I (cytochrome c) Atu1536 PWY-4521 arsenite oxidation I (respiratory) Atu1536 PWY-6692 Fe(II) oxidation Atu1536 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Atu1537 PWY-3781 aerobic respiration I (cytochrome c) Atu1537 PWY-4521 arsenite oxidation I (respiratory) Atu1537 PWY-6692 Fe(II) oxidation Atu1537 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Atu1542 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Atu1542 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Atu1542 PWY-6269 adenosylcobalamin salvage from cobinamide II Atu1556 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Atu1556 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Atu1571 PWY-6936 seleno-amino acid biosynthesis Atu1571 PWY-7274 D-cycloserine biosynthesis Atu1575 PWY-6936 seleno-amino acid biosynthesis Atu1599 PWY-5971 palmitate biosynthesis II (bacteria and plants) Atu1599 PWY-5973 cis-vaccenate biosynthesis Atu1599 PWY-5989 stearate biosynthesis II (bacteria and plants) Atu1599 PWY-5994 palmitate biosynthesis I (animals and fungi) Atu1599 PWY-6113 superpathway of mycolate biosynthesis Atu1599 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Atu1599 PWY-6519 8-amino-7-oxononanoate biosynthesis I Atu1599 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Atu1599 PWYG-321 mycolate biosynthesis Atu1610 PWY-6164 3-dehydroquinate biosynthesis I Atu1611 PWY-4081 glutathione redox reactions I Atu1613 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Atu1613 PWY-5723 Rubisco shunt Atu1614 PWY-181 photorespiration Atu1616 PWY-5392 reductive TCA cycle II Atu1616 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Atu1616 PWY-5690 TCA cycle II (plants and fungi) Atu1616 PWY-5913 TCA cycle VI (obligate autotrophs) Atu1616 PWY-6728 methylaspartate cycle Atu1616 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu1616 PWY-7254 TCA cycle VII (acetate-producers) Atu1616 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Atu1618 PWY-7176 UTP and CTP de novo biosynthesis Atu1618 PWY-7177 UTP and CTP dephosphorylation II Atu1618 PWY-7185 UTP and CTP dephosphorylation I Atu1620 PWY-1042 glycolysis IV (plant cytosol) Atu1620 PWY-5484 glycolysis II (from fructose 6-phosphate) Atu1620 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Atu1620 PWY-7003 glycerol degradation to butanol Atu1652 PWY-1281 sulfoacetaldehyde degradation I Atu1652 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Atu1652 PWY-5482 pyruvate fermentation to acetate II Atu1652 PWY-5485 pyruvate fermentation to acetate IV Atu1652 PWY-5497 purine nucleobases degradation II (anaerobic) Atu1652 PWY-6637 sulfolactate degradation II Atu1652 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Atu1654 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Atu1654 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Atu1670 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Atu1670 PWY-3162 L-tryptophan degradation V (side chain pathway) Atu1670 PWY-5057 L-valine degradation II Atu1670 PWY-5076 L-leucine degradation III Atu1670 PWY-5078 L-isoleucine degradation II Atu1670 PWY-5079 L-phenylalanine degradation III Atu1670 PWY-5082 L-methionine degradation III Atu1670 PWY-5480 pyruvate fermentation to ethanol I Atu1670 PWY-5486 pyruvate fermentation to ethanol II Atu1670 PWY-5751 phenylethanol biosynthesis Atu1670 PWY-6028 acetoin degradation Atu1670 PWY-6313 serotonin degradation Atu1670 PWY-6333 acetaldehyde biosynthesis I Atu1670 PWY-6342 noradrenaline and adrenaline degradation Atu1670 PWY-6587 pyruvate fermentation to ethanol III Atu1670 PWY-6802 salidroside biosynthesis Atu1670 PWY-6871 3-methylbutanol biosynthesis Atu1670 PWY-7013 L-1,2-propanediol degradation Atu1670 PWY-7111 pyruvate fermentation to isobutanol (engineered) Atu1670 PWY-7118 chitin degradation to ethanol Atu1670 PWY-7396 butanol and isobutanol biosynthesis (engineered) Atu1670 PWY-7557 dehydrodiconiferyl alcohol degradation Atu1676 PWY-5958 acridone alkaloid biosynthesis Atu1676 PWY-6543 4-aminobenzoate biosynthesis Atu1676 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Atu1676 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Atu1676 PWY-6722 candicidin biosynthesis Atu1677 PWY-6700 queuosine biosynthesis Atu1678 PWY-6700 queuosine biosynthesis Atu1690 PWY-6823 molybdenum cofactor biosynthesis Atu1692 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Atu1692 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Atu1695 PWY-6823 molybdenum cofactor biosynthesis Atu1698 PWY-5964 guanylyl molybdenum cofactor biosynthesis Atu1702 PWY-5381 pyridine nucleotide cycling (plants) Atu1702 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Atu1702 PWY-6596 adenosine nucleotides degradation I Atu1702 PWY-6606 guanosine nucleotides degradation II Atu1702 PWY-6607 guanosine nucleotides degradation I Atu1702 PWY-6608 guanosine nucleotides degradation III Atu1702 PWY-7185 UTP and CTP dephosphorylation I Atu1703 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Atu1728 PWY-6785 hydrogen production VIII Atu1733 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Atu1733 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Atu1733 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Atu1733 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Atu1733 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Atu1733 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Atu1733 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Atu1733 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Atu1749 PWY-5663 tetrahydrobiopterin biosynthesis I Atu1749 PWY-5664 tetrahydrobiopterin biosynthesis II Atu1749 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Atu1749 PWY-6703 preQ0 biosynthesis Atu1749 PWY-6983 tetrahydrobiopterin biosynthesis III Atu1749 PWY-7442 drosopterin and aurodrosopterin biosynthesis Atu1764 PWY-2201 folate transformations I Atu1764 PWY-3841 folate transformations II Atu1768 PWY-6938 NADH repair Atu1770 PWY-381 nitrate reduction II (assimilatory) Atu1770 PWY-5675 nitrate reduction V (assimilatory) Atu1770 PWY-6549 L-glutamine biosynthesis III Atu1770 PWY-6963 ammonia assimilation cycle I Atu1770 PWY-6964 ammonia assimilation cycle II Atu1786 PWY-6749 CMP-legionaminate biosynthesis I Atu1787 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Atu1793 PWY-6826 phosphatidylcholine biosynthesis VI Atu1800 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Atu1808 PWY-5129 sphingolipid biosynthesis (plants) Atu1821 PWY-6823 molybdenum cofactor biosynthesis Atu1821 PWY-6891 thiazole biosynthesis II (Bacillus) Atu1821 PWY-6892 thiazole biosynthesis I (E. coli) Atu1821 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Atu1825 PWY-6823 molybdenum cofactor biosynthesis Atu1825 PWY-6891 thiazole biosynthesis II (Bacillus) Atu1825 PWY-6892 thiazole biosynthesis I (E. coli) Atu1825 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Atu1839 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Atu1839 PWY-5723 Rubisco shunt Atu1841 PWY-6123 inosine-5'-phosphate biosynthesis I Atu1841 PWY-6124 inosine-5'-phosphate biosynthesis II Atu1841 PWY-7219 adenosine ribonucleotides de novo biosynthesis Atu1841 PWY-7234 inosine-5'-phosphate biosynthesis III Atu1843 PWY-6123 inosine-5'-phosphate biosynthesis I Atu1843 PWY-6124 inosine-5'-phosphate biosynthesis II Atu1843 PWY-7234 inosine-5'-phosphate biosynthesis III Atu1844 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Atu1844 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Atu1844 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Atu1845 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Atu1845 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Atu1845 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Atu1850 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Atu1850 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Atu1850 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Atu1867 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu1867 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu1870 PWY-5913 TCA cycle VI (obligate autotrophs) Atu1870 PWY-6549 L-glutamine biosynthesis III Atu1870 PWY-6728 methylaspartate cycle Atu1870 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu1870 PWY-7124 ethylene biosynthesis V (engineered) Atu1870 PWY-7254 TCA cycle VII (acetate-producers) Atu1870 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Atu1876 PWY-6019 pseudouridine degradation Atu1889 PWY-7039 phosphatidate metabolism, as a signaling molecule Atu1890 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Atu1890 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Atu1890 PWY-6269 adenosylcobalamin salvage from cobinamide II Atu1891 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Atu1891 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Atu1891 PWY-6269 adenosylcobalamin salvage from cobinamide II Atu1895 PWY-6167 flavin biosynthesis II (archaea) Atu1895 PWY-6168 flavin biosynthesis III (fungi) Atu1901 PWY-6891 thiazole biosynthesis II (Bacillus) Atu1901 PWY-6892 thiazole biosynthesis I (E. coli) Atu1901 PWY-7560 methylerythritol phosphate pathway II Atu1903 PWY-4261 glycerol degradation I Atu1918 PWY-5101 L-isoleucine biosynthesis II Atu1918 PWY-5103 L-isoleucine biosynthesis III Atu1918 PWY-5104 L-isoleucine biosynthesis IV Atu1918 PWY-7111 pyruvate fermentation to isobutanol (engineered) Atu1926 PWY-7219 adenosine ribonucleotides de novo biosynthesis Atu2019 PWY-5101 L-isoleucine biosynthesis II Atu2019 PWY-5103 L-isoleucine biosynthesis III Atu2019 PWY-5104 L-isoleucine biosynthesis IV Atu2019 PWY-7111 pyruvate fermentation to isobutanol (engineered) Atu2035 PWY-5101 L-isoleucine biosynthesis II Atu2035 PWY-5103 L-isoleucine biosynthesis III Atu2035 PWY-5104 L-isoleucine biosynthesis IV Atu2035 PWY-5938 (R)-acetoin biosynthesis I Atu2035 PWY-5939 (R)-acetoin biosynthesis II Atu2035 PWY-6389 (S)-acetoin biosynthesis Atu2035 PWY-7111 pyruvate fermentation to isobutanol (engineered) Atu2036 PWY-5101 L-isoleucine biosynthesis II Atu2036 PWY-5103 L-isoleucine biosynthesis III Atu2036 PWY-5104 L-isoleucine biosynthesis IV Atu2036 PWY-5938 (R)-acetoin biosynthesis I Atu2036 PWY-5939 (R)-acetoin biosynthesis II Atu2036 PWY-6389 (S)-acetoin biosynthesis Atu2036 PWY-7111 pyruvate fermentation to isobutanol (engineered) Atu2039 PWY-2781 cis-zeatin biosynthesis Atu2046 PWY-3841 folate transformations II Atu2046 PWY-6614 tetrahydrofolate biosynthesis Atu2047 PWY-3841 folate transformations II Atu2047 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Atu2047 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Atu2047 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Atu2047 PWY-7199 pyrimidine deoxyribonucleosides salvage Atu2047 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Atu2053 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu2053 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu2089 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu2089 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu2092 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu2092 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu2093 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu2093 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu2094 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Atu2094 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Atu2094 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Atu2094 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Atu2096 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu2096 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu2097 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Atu2097 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Atu2097 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Atu2098 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu2098 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu2115 PWY-1042 glycolysis IV (plant cytosol) Atu2115 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Atu2115 PWY-5484 glycolysis II (from fructose 6-phosphate) Atu2115 PWY-6531 mannitol cycle Atu2115 PWY-7385 1,3-propanediol biosynthesis (engineered) Atu2123 PWY-2201 folate transformations I Atu2123 PWY-3841 folate transformations II Atu2142 PWY-381 nitrate reduction II (assimilatory) Atu2142 PWY-5675 nitrate reduction V (assimilatory) Atu2142 PWY-6549 L-glutamine biosynthesis III Atu2142 PWY-6963 ammonia assimilation cycle I Atu2142 PWY-6964 ammonia assimilation cycle II Atu2155 PWY-2201 folate transformations I Atu2155 PWY-3841 folate transformations II Atu2170 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Atu2170 PWY-5686 UMP biosynthesis Atu2170 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Atu2178 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Atu2178 PWY-5686 UMP biosynthesis Atu2178 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Atu2209 PWY-3341 L-proline biosynthesis III Atu2209 PWY-4981 L-proline biosynthesis II (from arginine) Atu2209 PWY-6344 L-ornithine degradation II (Stickland reaction) Atu2236 PWY-6605 adenine and adenosine salvage II Atu2236 PWY-6610 adenine and adenosine salvage IV Atu2239 PWY-3781 aerobic respiration I (cytochrome c) Atu2239 PWY-6692 Fe(II) oxidation Atu2239 PWY-7082 ammonia oxidation IV (autotrophic ammonia oxidizers) Atu2239 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Atu2247 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Atu2247 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Atu2261 PWY-4061 glutathione-mediated detoxification I Atu2261 PWY-6842 glutathione-mediated detoxification II Atu2261 PWY-7112 4-hydroxy-2-nonenal detoxification Atu2261 PWY-7533 gliotoxin biosynthesis Atu2264 PWY-6871 3-methylbutanol biosynthesis Atu2273 PWY-6700 queuosine biosynthesis Atu2282 PWY-7199 pyrimidine deoxyribonucleosides salvage Atu2289 PWY-5958 acridone alkaloid biosynthesis Atu2289 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Atu2289 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Atu2292 PWY-6610 adenine and adenosine salvage IV Atu2309 PWY-5497 purine nucleobases degradation II (anaerobic) Atu2309 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Atu2309 PWY-6538 caffeine degradation III (bacteria, via demethylation) Atu2309 PWY-6596 adenosine nucleotides degradation I Atu2309 PWY-6606 guanosine nucleotides degradation II Atu2309 PWY-6607 guanosine nucleotides degradation I Atu2309 PWY-6608 guanosine nucleotides degradation III Atu2309 PWY-6999 theophylline degradation Atu2310 PWY-5497 purine nucleobases degradation II (anaerobic) Atu2310 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Atu2310 PWY-6538 caffeine degradation III (bacteria, via demethylation) Atu2310 PWY-6596 adenosine nucleotides degradation I Atu2310 PWY-6606 guanosine nucleotides degradation II Atu2310 PWY-6607 guanosine nucleotides degradation I Atu2310 PWY-6608 guanosine nucleotides degradation III Atu2310 PWY-6999 theophylline degradation Atu2315 PWY-5497 purine nucleobases degradation II (anaerobic) Atu2315 PWY-6606 guanosine nucleotides degradation II Atu2315 PWY-6608 guanosine nucleotides degradation III Atu2315 PWY-7442 drosopterin and aurodrosopterin biosynthesis Atu2323 PWY-5691 urate degradation to allantoin I Atu2323 PWY-7394 urate degradation to allantoin II Atu2324 PWY-5694 allantoin degradation to glyoxylate I Atu2324 PWY-5705 allantoin degradation to glyoxylate III Atu2327 PWY-5691 urate degradation to allantoin I Atu2327 PWY-7394 urate degradation to allantoin II Atu2329 PWY-5532 adenosine nucleotides degradation IV Atu2371 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Atu2379 PWY-6749 CMP-legionaminate biosynthesis I Atu2401 PWY-5704 urea degradation II Atu2404 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Atu2405 PWY-5704 urea degradation II Atu2407 PWY-5704 urea degradation II Atu2416 PWY-381 nitrate reduction II (assimilatory) Atu2416 PWY-5675 nitrate reduction V (assimilatory) Atu2416 PWY-6549 L-glutamine biosynthesis III Atu2416 PWY-6963 ammonia assimilation cycle I Atu2416 PWY-6964 ammonia assimilation cycle II Atu2447 PWY-7219 adenosine ribonucleotides de novo biosynthesis Atu2464 PWY-2201 folate transformations I Atu2464 PWY-5497 purine nucleobases degradation II (anaerobic) Atu2487 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Atu2487 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Atu2488 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Atu2488 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Atu2488 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Atu2488 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Atu2490 PWY-2941 L-lysine biosynthesis II Atu2490 PWY-2942 L-lysine biosynthesis III Atu2490 PWY-5097 L-lysine biosynthesis VI Atu2490 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Atu2490 PWY-6559 spermidine biosynthesis II Atu2490 PWY-6562 norspermidine biosynthesis Atu2490 PWY-7153 grixazone biosynthesis Atu2490 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Atu2502 PWY-5874 heme degradation Atu2502 PWY-5915 phycoerythrobilin biosynthesis I Atu2502 PWY-5917 phycocyanobilin biosynthesis Atu2502 PWY-7170 phytochromobilin biosynthesis Atu2510 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Atu2519 PWY-7533 gliotoxin biosynthesis Atu2548 PWY-6123 inosine-5'-phosphate biosynthesis I Atu2548 PWY-6124 inosine-5'-phosphate biosynthesis II Atu2548 PWY-7234 inosine-5'-phosphate biosynthesis III Atu2565 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Atu2566 PWY-6891 thiazole biosynthesis II (Bacillus) Atu2566 PWY-6892 thiazole biosynthesis I (E. coli) Atu2569 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Atu2596 PWY-6902 chitin degradation II Atu2608 PWY-6906 chitin derivatives degradation Atu2608 PWY-7077 N-acetyl-D-galactosamine degradation Atu2608 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation Atu2612 PWY-7560 methylerythritol phosphate pathway II Atu2613 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Atu2613 PWY-7536 2-amino-3-hydroxycyclopent-2-enone biosynthesis Atu2622 PWY-7219 adenosine ribonucleotides de novo biosynthesis Atu2624 PWY-7219 adenosine ribonucleotides de novo biosynthesis Atu2632 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Atu2632 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Atu2635 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Atu2636 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Atu2637 PWY-5392 reductive TCA cycle II Atu2637 PWY-5537 pyruvate fermentation to acetate V Atu2637 PWY-5538 pyruvate fermentation to acetate VI Atu2637 PWY-5690 TCA cycle II (plants and fungi) Atu2637 PWY-5913 TCA cycle VI (obligate autotrophs) Atu2637 PWY-6728 methylaspartate cycle Atu2637 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu2637 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Atu2638 PWY-5392 reductive TCA cycle II Atu2638 PWY-5537 pyruvate fermentation to acetate V Atu2638 PWY-5538 pyruvate fermentation to acetate VI Atu2638 PWY-5690 TCA cycle II (plants and fungi) Atu2638 PWY-5913 TCA cycle VI (obligate autotrophs) Atu2638 PWY-6728 methylaspartate cycle Atu2638 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu2638 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Atu2639 PWY-1622 formaldehyde assimilation I (serine pathway) Atu2639 PWY-5392 reductive TCA cycle II Atu2639 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Atu2639 PWY-5690 TCA cycle II (plants and fungi) Atu2639 PWY-5913 TCA cycle VI (obligate autotrophs) Atu2639 PWY-6728 methylaspartate cycle Atu2639 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu2639 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Atu2639 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Atu2642 PWY-3781 aerobic respiration I (cytochrome c) Atu2642 PWY-4302 aerobic respiration III (alternative oxidase pathway) Atu2642 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Atu2642 PWY-5690 TCA cycle II (plants and fungi) Atu2642 PWY-6728 methylaspartate cycle Atu2642 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu2642 PWY-7254 TCA cycle VII (acetate-producers) Atu2642 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Atu2643 PWY-3781 aerobic respiration I (cytochrome c) Atu2643 PWY-4302 aerobic respiration III (alternative oxidase pathway) Atu2643 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Atu2643 PWY-5690 TCA cycle II (plants and fungi) Atu2643 PWY-6728 methylaspartate cycle Atu2643 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Atu2643 PWY-7254 TCA cycle VII (acetate-producers) Atu2643 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Atu2650 PWY-5667 CDP-diacylglycerol biosynthesis I Atu2650 PWY-5981 CDP-diacylglycerol biosynthesis III Atu2652 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Atu2652 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Atu2653 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Atu2653 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Atu2667 PWY-4983 L-citrulline-nitric oxide cycle Atu2667 PWY-4984 urea cycle Atu2667 PWY-5 canavanine biosynthesis Atu2667 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Atu2667 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Atu2676 PWY-7158 L-phenylalanine degradation V Atu2677 PWY-6348 phosphate acquisition Atu2677 PWY-6357 phosphate utilization in cell wall regeneration Atu2677 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Atu2677 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Atu2695 PWY-2941 L-lysine biosynthesis II Atu2695 PWY-5097 L-lysine biosynthesis VI Atu2698 PWY-3461 L-tyrosine biosynthesis II Atu2698 PWY-3462 L-phenylalanine biosynthesis II Atu2698 PWY-6120 L-tyrosine biosynthesis III Atu2698 PWY-6627 salinosporamide A biosynthesis Atu2701 PWY-6829 tRNA methylation (yeast) Atu2701 PWY-7285 methylwyosine biosynthesis Atu2701 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Atu2717 PWY-6898 thiamin salvage III Atu2717 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Atu2717 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Atu2719 PWY-2723 trehalose degradation V Atu2719 PWY-6317 galactose degradation I (Leloir pathway) Atu2719 PWY-6737 starch degradation V Atu2723 PWY-7560 methylerythritol phosphate pathway II Atu2726 PWY-5750 itaconate biosynthesis Atu2726 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Atu2726 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Atu2736 PWY-5101 L-isoleucine biosynthesis II Atu2736 PWY-5103 L-isoleucine biosynthesis III Atu2736 PWY-5104 L-isoleucine biosynthesis IV Atu2736 PWY-7111 pyruvate fermentation to isobutanol (engineered) Atu2739 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Atu2739 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Atu2745 PWY-6672 cis-genanyl-CoA degradation Atu2745 PWY-7118 chitin degradation to ethanol Atu2747 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Atu2766 PWY-5022 4-aminobutanoate degradation V Atu2766 PWY-6728 methylaspartate cycle Atu2766 PWY-7126 ethylene biosynthesis IV Atu2770 PWY-5676 acetyl-CoA fermentation to butanoate II Atu2770 PWY-5741 ethylmalonyl-CoA pathway Atu2770 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Atu2778 PWY-5381 pyridine nucleotide cycling (plants) Atu2778 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Atu2791 PWY-7396 butanol and isobutanol biosynthesis (engineered) Atu2794 PWY-5194 siroheme biosynthesis Atu2794 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Atu2795 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Atu2796 PWY-5194 siroheme biosynthesis Atu2796 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Atu2798 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Atu2801 PWY-5194 siroheme biosynthesis Atu2801 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Atu2803 PWY-6683 sulfate reduction III (assimilatory) Atu2807 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Atu2807 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Atu2807 PWY-6268 adenosylcobalamin salvage from cobalamin Atu2807 PWY-6269 adenosylcobalamin salvage from cobinamide II Atu2810 PWY-5443 aminopropanol phosphate biosynthesis I Atu2823 PWY-6123 inosine-5'-phosphate biosynthesis I Atu2823 PWY-6124 inosine-5'-phosphate biosynthesis II Atu2823 PWY-7234 inosine-5'-phosphate biosynthesis III Atu2833 PWY-7219 adenosine ribonucleotides de novo biosynthesis Atu2835 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Atu2835 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent)