Avi_0004	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Avi_0022	PWY-4381	fatty acid biosynthesis initiation I
Avi_0022	PWY-5743	3-hydroxypropanoate cycle
Avi_0022	PWY-5744	glyoxylate assimilation
Avi_0022	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Avi_0022	PWY-6679	jadomycin biosynthesis
Avi_0022	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Avi_0024	PWY-2161	folate polyglutamylation
Avi_0039	PWY-3961	phosphopantothenate biosynthesis II
Avi_0042	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Avi_0042	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Avi_0049	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Avi_0057	PWY-6728	methylaspartate cycle
Avi_0057	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_0057	PWY-7118	chitin degradation to ethanol
Avi_0057	PWY-7294	xylose degradation IV
Avi_0057	PWY-7295	L-arabinose degradation IV
Avi_0080	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Avi_0094	PWY-4261	glycerol degradation I
Avi_0094	PWY-6118	glycerol-3-phosphate shuttle
Avi_0094	PWY-6952	glycerophosphodiester degradation
Avi_0103	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Avi_0103	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Avi_0105	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Avi_0108	PWY-5381	pyridine nucleotide cycling (plants)
Avi_0126	PWY-6749	CMP-legionaminate biosynthesis I
Avi_0131	PWY-5381	pyridine nucleotide cycling (plants)
Avi_0179	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Avi_0179	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Avi_0179	PWY-5989	stearate biosynthesis II (bacteria and plants)
Avi_0179	PWY-6113	superpathway of mycolate biosynthesis
Avi_0179	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Avi_0179	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Avi_0179	PWY-7096	triclosan resistance
Avi_0179	PWYG-321	mycolate biosynthesis
Avi_0181	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Avi_0181	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Avi_0181	PWY-5989	stearate biosynthesis II (bacteria and plants)
Avi_0181	PWY-5994	palmitate biosynthesis I (animals and fungi)
Avi_0181	PWY-6113	superpathway of mycolate biosynthesis
Avi_0181	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Avi_0181	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Avi_0181	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Avi_0181	PWYG-321	mycolate biosynthesis
Avi_0193	PWY-7205	CMP phosphorylation
Avi_0229	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Avi_0230	PWY-6610	adenine and adenosine salvage IV
Avi_0231	PWY-7183	pyrimidine nucleobases salvage I
Avi_0235	PWY-1622	formaldehyde assimilation I (serine pathway)
Avi_0235	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_0237	PWY-2941	L-lysine biosynthesis II
Avi_0237	PWY-2942	L-lysine biosynthesis III
Avi_0237	PWY-5097	L-lysine biosynthesis VI
Avi_0239	PWY-2723	trehalose degradation V
Avi_0239	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Avi_0239	PWY-5661	GDP-glucose biosynthesis
Avi_0239	PWY-7238	sucrose biosynthesis II
Avi_0239	PWY-7385	1,3-propanediol biosynthesis (engineered)
Avi_0250	PWY-5381	pyridine nucleotide cycling (plants)
Avi_0262	PWY-6556	pyrimidine ribonucleosides salvage II
Avi_0262	PWY-7181	pyrimidine deoxyribonucleosides degradation
Avi_0262	PWY-7193	pyrimidine ribonucleosides salvage I
Avi_0262	PWY-7199	pyrimidine deoxyribonucleosides salvage
Avi_0263	PWY-4202	arsenate detoxification I (glutaredoxin)
Avi_0263	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Avi_0263	PWY-6608	guanosine nucleotides degradation III
Avi_0263	PWY-6609	adenine and adenosine salvage III
Avi_0263	PWY-6611	adenine and adenosine salvage V
Avi_0263	PWY-6620	guanine and guanosine salvage
Avi_0263	PWY-6627	salinosporamide A biosynthesis
Avi_0263	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Avi_0263	PWY-7179	purine deoxyribonucleosides degradation I
Avi_0263	PWY-7179-1	purine deoxyribonucleosides degradation
Avi_0264	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Avi_0265	PWY-7181	pyrimidine deoxyribonucleosides degradation
Avi_0267	PWY-7399	methylphosphonate degradation II
Avi_0273	PWY-7399	methylphosphonate degradation II
Avi_0275	PWY-7399	methylphosphonate degradation II
Avi_0286	PWY-5532	adenosine nucleotides degradation IV
Avi_0287	PWY-7399	methylphosphonate degradation II
Avi_0288	PWY-5532	adenosine nucleotides degradation IV
Avi_0292	PWY-5988	wound-induced proteolysis I
Avi_0292	PWY-6018	seed germination protein turnover
Avi_0327	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Avi_0347	PWY-5686	UMP biosynthesis
Avi_0360	PWY-5692	allantoin degradation to glyoxylate II
Avi_0360	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Avi_0364	PWY-6936	seleno-amino acid biosynthesis
Avi_0368	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Avi_0368	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Avi_0368	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_0368	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Avi_0372	PWY-6910	hydroxymethylpyrimidine salvage
Avi_0372	PWY-7356	thiamin salvage IV (yeast)
Avi_0372	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Avi_0373	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Avi_0388	PWY-5839	menaquinol-7 biosynthesis
Avi_0388	PWY-5844	menaquinol-9 biosynthesis
Avi_0388	PWY-5849	menaquinol-6 biosynthesis
Avi_0388	PWY-5890	menaquinol-10 biosynthesis
Avi_0388	PWY-5891	menaquinol-11 biosynthesis
Avi_0388	PWY-5892	menaquinol-12 biosynthesis
Avi_0388	PWY-5895	menaquinol-13 biosynthesis
Avi_0395	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Avi_0444	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Avi_0444	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Avi_0464	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_0464	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_0479	PWY-4981	L-proline biosynthesis II (from arginine)
Avi_0479	PWY-4984	urea cycle
Avi_0479	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_0500	PWY-723	alkylnitronates degradation
Avi_0524	PWY-5686	UMP biosynthesis
Avi_0528	PWY-5686	UMP biosynthesis
Avi_0534	PWY-3801	sucrose degradation II (sucrose synthase)
Avi_0534	PWY-5054	sorbitol biosynthesis I
Avi_0534	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Avi_0534	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Avi_0534	PWY-5659	GDP-mannose biosynthesis
Avi_0534	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_0534	PWY-621	sucrose degradation III (sucrose invertase)
Avi_0534	PWY-622	starch biosynthesis
Avi_0534	PWY-6531	mannitol cycle
Avi_0534	PWY-6981	chitin biosynthesis
Avi_0534	PWY-7238	sucrose biosynthesis II
Avi_0534	PWY-7347	sucrose biosynthesis III
Avi_0534	PWY-7385	1,3-propanediol biosynthesis (engineered)
Avi_0545	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_0586	PWY-5686	UMP biosynthesis
Avi_0597	PWY-1361	benzoyl-CoA degradation I (aerobic)
Avi_0597	PWY-5109	2-methylbutanoate biosynthesis
Avi_0597	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Avi_0597	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Avi_0597	PWY-5177	glutaryl-CoA degradation
Avi_0597	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Avi_0597	PWY-6435	4-hydroxybenzoate biosynthesis V
Avi_0597	PWY-6583	pyruvate fermentation to butanol I
Avi_0597	PWY-6863	pyruvate fermentation to hexanol
Avi_0597	PWY-6883	pyruvate fermentation to butanol II
Avi_0597	PWY-6944	androstenedione degradation
Avi_0597	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Avi_0597	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Avi_0597	PWY-7007	methyl ketone biosynthesis
Avi_0597	PWY-7046	4-coumarate degradation (anaerobic)
Avi_0597	PWY-7094	fatty acid salvage
Avi_0597	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Avi_0597	PWY-735	jasmonic acid biosynthesis
Avi_0597	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Avi_0605	PWY-5491	diethylphosphate degradation
Avi_0626	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Avi_0626	PWY-5940	streptomycin biosynthesis
Avi_0627	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Avi_0645	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_0645	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_0731	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Avi_0782	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Avi_0782	PWY-2201	folate transformations I
Avi_0782	PWY-3841	folate transformations II
Avi_0782	PWY-5030	L-histidine degradation III
Avi_0782	PWY-5497	purine nucleobases degradation II (anaerobic)
Avi_0782	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Avi_0796	PWY-5101	L-isoleucine biosynthesis II
Avi_0796	PWY-5103	L-isoleucine biosynthesis III
Avi_0796	PWY-5104	L-isoleucine biosynthesis IV
Avi_0796	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Avi_0797	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Avi_0797	PWY-6855	chitin degradation I (archaea)
Avi_0797	PWY-6906	chitin derivatives degradation
Avi_0798	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Avi_0800	PWY-381	nitrate reduction II (assimilatory)
Avi_0800	PWY-5675	nitrate reduction V (assimilatory)
Avi_0800	PWY-6549	L-glutamine biosynthesis III
Avi_0800	PWY-6963	ammonia assimilation cycle I
Avi_0800	PWY-6964	ammonia assimilation cycle II
Avi_0816	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_0836	PWY-5642	2,4-dinitrotoluene degradation
Avi_0836	PWY-6373	acrylate degradation
Avi_0840	PWY-5530	sorbitol biosynthesis II
Avi_0840	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Avi_0851	PWY-7254	TCA cycle VII (acetate-producers)
Avi_0941	PWY-7560	methylerythritol phosphate pathway II
Avi_0955	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Avi_0960	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Avi_0960	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Avi_0960	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Avi_0975	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_0975	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_0997	PWY-6891	thiazole biosynthesis II (Bacillus)
Avi_0997	PWY-6892	thiazole biosynthesis I (E. coli)
Avi_0997	PWY-7560	methylerythritol phosphate pathway II
Avi_1009	PWY-40	putrescine biosynthesis I
Avi_1009	PWY-6305	putrescine biosynthesis IV
Avi_1014	PWY-6167	flavin biosynthesis II (archaea)
Avi_1014	PWY-6168	flavin biosynthesis III (fungi)
Avi_1014	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Avi_1015	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Avi_1021	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Avi_1021	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Avi_1021	PWY-5989	stearate biosynthesis II (bacteria and plants)
Avi_1021	PWY-6113	superpathway of mycolate biosynthesis
Avi_1021	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Avi_1021	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Avi_1021	PWY-7096	triclosan resistance
Avi_1021	PWYG-321	mycolate biosynthesis
Avi_1026	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Avi_1026	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Avi_1041	PWY-3781	aerobic respiration I (cytochrome c)
Avi_1041	PWY-4521	arsenite oxidation I (respiratory)
Avi_1041	PWY-6692	Fe(II) oxidation
Avi_1041	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Avi_1052	PWY-7560	methylerythritol phosphate pathway II
Avi_1057	PWY-4041	&gamma;-glutamyl cycle
Avi_1059	PWY-702	L-methionine biosynthesis II
Avi_1087	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Avi_1087	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Avi_1102	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Avi_1102	PWY-6549	L-glutamine biosynthesis III
Avi_1102	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Avi_1102	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Avi_1120	PWY-5278	sulfite oxidation III
Avi_1120	PWY-5340	sulfate activation for sulfonation
Avi_1120	PWY-6683	sulfate reduction III (assimilatory)
Avi_1120	PWY-6932	selenate reduction
Avi_1122	PWY-5278	sulfite oxidation III
Avi_1122	PWY-5340	sulfate activation for sulfonation
Avi_1122	PWY-6683	sulfate reduction III (assimilatory)
Avi_1122	PWY-6932	selenate reduction
Avi_1144	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Avi_1144	PWY-7494	choline degradation IV
Avi_1147	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Avi_1147	PWY-7494	choline degradation IV
Avi_1173	PWY-4041	&gamma;-glutamyl cycle
Avi_1173	PWY-5826	hypoglycin biosynthesis
Avi_1199	PWY-5686	UMP biosynthesis
Avi_1206	PWY-1042	glycolysis IV (plant cytosol)
Avi_1206	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Avi_1206	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_1206	PWY-5723	Rubisco shunt
Avi_1206	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_1206	PWY-6886	1-butanol autotrophic biosynthesis
Avi_1206	PWY-6901	superpathway of glucose and xylose degradation
Avi_1206	PWY-7003	glycerol degradation to butanol
Avi_1206	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Avi_1206	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Avi_1245	PWY-6854	ethylene biosynthesis III (microbes)
Avi_1332	PWY-6902	chitin degradation II
Avi_1393	PWY-5057	L-valine degradation II
Avi_1393	PWY-5076	L-leucine degradation III
Avi_1393	PWY-5078	L-isoleucine degradation II
Avi_1393	PWY-5101	L-isoleucine biosynthesis II
Avi_1393	PWY-5103	L-isoleucine biosynthesis III
Avi_1393	PWY-5104	L-isoleucine biosynthesis IV
Avi_1393	PWY-5108	L-isoleucine biosynthesis V
Avi_1401	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Avi_1401	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Avi_1401	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Avi_1406	PWY-381	nitrate reduction II (assimilatory)
Avi_1406	PWY-5675	nitrate reduction V (assimilatory)
Avi_1406	PWY-6549	L-glutamine biosynthesis III
Avi_1406	PWY-6963	ammonia assimilation cycle I
Avi_1406	PWY-6964	ammonia assimilation cycle II
Avi_1414	PWY-6617	adenosine nucleotides degradation III
Avi_1432	PWY-2941	L-lysine biosynthesis II
Avi_1432	PWY-2942	L-lysine biosynthesis III
Avi_1432	PWY-5097	L-lysine biosynthesis VI
Avi_1471	PWY-5669	phosphatidylethanolamine biosynthesis I
Avi_1477	PWY-5101	L-isoleucine biosynthesis II
Avi_1477	PWY-6871	3-methylbutanol biosynthesis
Avi_1480	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Avi_1482	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Avi_1483	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Avi_1491	PWY-3221	dTDP-L-rhamnose biosynthesis II
Avi_1491	PWY-6808	dTDP-D-forosamine biosynthesis
Avi_1491	PWY-6942	dTDP-D-desosamine biosynthesis
Avi_1491	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Avi_1491	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Avi_1491	PWY-6974	dTDP-L-olivose biosynthesis
Avi_1491	PWY-6976	dTDP-L-mycarose biosynthesis
Avi_1491	PWY-7104	dTDP-L-megosamine biosynthesis
Avi_1491	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Avi_1491	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Avi_1491	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Avi_1491	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Avi_1491	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Avi_1491	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Avi_1491	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Avi_1491	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Avi_1494	PWY-3221	dTDP-L-rhamnose biosynthesis II
Avi_1494	PWY-6808	dTDP-D-forosamine biosynthesis
Avi_1494	PWY-6942	dTDP-D-desosamine biosynthesis
Avi_1494	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Avi_1494	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Avi_1494	PWY-6974	dTDP-L-olivose biosynthesis
Avi_1494	PWY-6976	dTDP-L-mycarose biosynthesis
Avi_1494	PWY-7104	dTDP-L-megosamine biosynthesis
Avi_1494	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Avi_1494	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Avi_1494	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Avi_1494	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Avi_1494	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Avi_1494	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Avi_1494	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Avi_1494	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Avi_1499	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Avi_1499	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Avi_1499	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Avi_1499	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Avi_1502	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Avi_1503	PWY-3821	galactose degradation III
Avi_1503	PWY-6317	galactose degradation I (Leloir pathway)
Avi_1503	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Avi_1503	PWY-6527	stachyose degradation
Avi_1503	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Avi_1503	PWY-7344	UDP-D-galactose biosynthesis
Avi_1508	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Avi_1527	PWY-4381	fatty acid biosynthesis initiation I
Avi_1527	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Avi_1527	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Avi_1528	PWY-5367	petroselinate biosynthesis
Avi_1528	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Avi_1528	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Avi_1528	PWY-5989	stearate biosynthesis II (bacteria and plants)
Avi_1528	PWY-5994	palmitate biosynthesis I (animals and fungi)
Avi_1528	PWY-6113	superpathway of mycolate biosynthesis
Avi_1528	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Avi_1528	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Avi_1528	PWY-6951	Avi_1528|fabG|YP_002549098.1|GeneID:7386485
Avi_1528	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Avi_1528	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Avi_1528	PWYG-321	mycolate biosynthesis
Avi_1535	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Avi_1545	PWY-5988	wound-induced proteolysis I
Avi_1545	PWY-6018	seed germination protein turnover
Avi_1552	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Avi_1552	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Avi_1552	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Avi_1552	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_1552	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Avi_1552	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Avi_1552	PWY-7205	CMP phosphorylation
Avi_1552	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Avi_1552	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_1552	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Avi_1552	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_1552	PWY-7224	purine deoxyribonucleosides salvage
Avi_1552	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Avi_1552	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Avi_1553	PWY-6823	molybdenum cofactor biosynthesis
Avi_1556	PWY-5269	cardiolipin biosynthesis II
Avi_1556	PWY-5668	cardiolipin biosynthesis I
Avi_1574	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Avi_1574	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Avi_1575	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Avi_1575	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Avi_1575	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Avi_1603	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Avi_1603	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Avi_1610	PWY-1622	formaldehyde assimilation I (serine pathway)
Avi_1610	PWY-181	photorespiration
Avi_1610	PWY-2161	folate polyglutamylation
Avi_1610	PWY-2201	folate transformations I
Avi_1610	PWY-3661	glycine betaine degradation I
Avi_1610	PWY-3661-1	glycine betaine degradation II (mammalian)
Avi_1610	PWY-3841	folate transformations II
Avi_1610	PWY-5497	purine nucleobases degradation II (anaerobic)
Avi_1614	PWY-6167	flavin biosynthesis II (archaea)
Avi_1614	PWY-6168	flavin biosynthesis III (fungi)
Avi_1614	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Avi_1618	PWY-6167	flavin biosynthesis II (archaea)
Avi_1618	PWY-6168	flavin biosynthesis III (fungi)
Avi_1630	PWY-4381	fatty acid biosynthesis initiation I
Avi_1663	PWY-6655	xanthan biosynthesis
Avi_1663	PWY-6658	acetan biosynthesis
Avi_1674	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_1674	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_1675	PWY-40	putrescine biosynthesis I
Avi_1675	PWY-6305	putrescine biosynthesis IV
Avi_1690	PWY-5344	L-homocysteine biosynthesis
Avi_1690	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Avi_1693	PWY-5692	allantoin degradation to glyoxylate II
Avi_1693	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Avi_1727	PWY-3781	aerobic respiration I (cytochrome c)
Avi_1727	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Avi_1727	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Avi_1727	PWY-6692	Fe(II) oxidation
Avi_1728	PWY-3781	aerobic respiration I (cytochrome c)
Avi_1728	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Avi_1728	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Avi_1728	PWY-6692	Fe(II) oxidation
Avi_1730	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Avi_1730	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Avi_1733	PWY-5743	3-hydroxypropanoate cycle
Avi_1733	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Avi_1733	PWY-6728	methylaspartate cycle
Avi_1733	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Avi_1761	PWY-5686	UMP biosynthesis
Avi_1762	PWY-5686	UMP biosynthesis
Avi_1773	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Avi_1789	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Avi_1789	PWY-6416	quinate degradation II
Avi_1789	PWY-6707	gallate biosynthesis
Avi_1801	PWY-5686	UMP biosynthesis
Avi_1804	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Avi_1804	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Avi_1804	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Avi_1864	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Avi_1877	PWY-5350	thiosulfate disproportionation III (rhodanese)
Avi_1889	PWY-6157	autoinducer AI-1 biosynthesis
Avi_1891	PWY-1281	sulfoacetaldehyde degradation I
Avi_1891	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Avi_1891	PWY-5482	pyruvate fermentation to acetate II
Avi_1891	PWY-5485	pyruvate fermentation to acetate IV
Avi_1891	PWY-5497	purine nucleobases degradation II (anaerobic)
Avi_1891	PWY-6637	sulfolactate degradation II
Avi_1891	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Avi_1902	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Avi_1902	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Avi_1902	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Avi_1905	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Avi_1905	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Avi_1905	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Avi_1906	PWY-6123	inosine-5'-phosphate biosynthesis I
Avi_1906	PWY-6124	inosine-5'-phosphate biosynthesis II
Avi_1906	PWY-7234	inosine-5'-phosphate biosynthesis III
Avi_1909	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Avi_1913	PWY-5913	TCA cycle VI (obligate autotrophs)
Avi_1913	PWY-6549	L-glutamine biosynthesis III
Avi_1913	PWY-6728	methylaspartate cycle
Avi_1913	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_1913	PWY-7124	ethylene biosynthesis V (engineered)
Avi_1913	PWY-7254	TCA cycle VII (acetate-producers)
Avi_1913	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Avi_1916	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_1916	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_1923	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Avi_1923	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_1923	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Avi_1923	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Avi_1941	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Avi_1941	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Avi_1941	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Avi_1948	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Avi_1948	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Avi_1983	PWY-3221	dTDP-L-rhamnose biosynthesis II
Avi_1983	PWY-6808	dTDP-D-forosamine biosynthesis
Avi_1983	PWY-6942	dTDP-D-desosamine biosynthesis
Avi_1983	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Avi_1983	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Avi_1983	PWY-6974	dTDP-L-olivose biosynthesis
Avi_1983	PWY-6976	dTDP-L-mycarose biosynthesis
Avi_1983	PWY-7104	dTDP-L-megosamine biosynthesis
Avi_1983	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Avi_1983	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Avi_1983	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Avi_1983	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Avi_1983	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Avi_1983	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Avi_1983	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Avi_1983	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Avi_1986	PWY-3221	dTDP-L-rhamnose biosynthesis II
Avi_1986	PWY-6808	dTDP-D-forosamine biosynthesis
Avi_1986	PWY-6942	dTDP-D-desosamine biosynthesis
Avi_1986	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Avi_1986	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Avi_1986	PWY-6974	dTDP-L-olivose biosynthesis
Avi_1986	PWY-6976	dTDP-L-mycarose biosynthesis
Avi_1986	PWY-7104	dTDP-L-megosamine biosynthesis
Avi_1986	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Avi_1986	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Avi_1986	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Avi_1986	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Avi_1986	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Avi_1986	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Avi_1986	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Avi_1986	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Avi_2001	PWY-6902	chitin degradation II
Avi_2016	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Avi_2016	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Avi_2016	PWY-6269	adenosylcobalamin salvage from cobinamide II
Avi_2018	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Avi_2018	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Avi_2018	PWY-6269	adenosylcobalamin salvage from cobinamide II
Avi_2020	PWY-7039	phosphatidate metabolism, as a signaling molecule
Avi_2030	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Avi_2030	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Avi_2030	PWY-5989	stearate biosynthesis II (bacteria and plants)
Avi_2030	PWY-5994	palmitate biosynthesis I (animals and fungi)
Avi_2030	PWY-6113	superpathway of mycolate biosynthesis
Avi_2030	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Avi_2030	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Avi_2030	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Avi_2030	PWYG-321	mycolate biosynthesis
Avi_2040	PWY-5381	pyridine nucleotide cycling (plants)
Avi_2040	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Avi_2042	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Avi_2042	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Avi_2070	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Avi_2072	PWY-6823	molybdenum cofactor biosynthesis
Avi_2076	PWY-5392	reductive TCA cycle II
Avi_2076	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Avi_2076	PWY-5690	TCA cycle II (plants and fungi)
Avi_2076	PWY-5913	TCA cycle VI (obligate autotrophs)
Avi_2076	PWY-6728	methylaspartate cycle
Avi_2076	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_2076	PWY-7254	TCA cycle VII (acetate-producers)
Avi_2076	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Avi_2077	PWY-5392	reductive TCA cycle II
Avi_2077	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Avi_2077	PWY-5690	TCA cycle II (plants and fungi)
Avi_2077	PWY-5913	TCA cycle VI (obligate autotrophs)
Avi_2077	PWY-6728	methylaspartate cycle
Avi_2077	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_2077	PWY-7254	TCA cycle VII (acetate-producers)
Avi_2077	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Avi_2080	PWY-181	photorespiration
Avi_2081	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Avi_2081	PWY-5723	Rubisco shunt
Avi_2085	PWY-4081	glutathione redox reactions I
Avi_2087	PWY-6164	3-dehydroquinate biosynthesis I
Avi_2092	PWY-3781	aerobic respiration I (cytochrome c)
Avi_2092	PWY-4521	arsenite oxidation I (respiratory)
Avi_2092	PWY-6692	Fe(II) oxidation
Avi_2092	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Avi_2093	PWY-3781	aerobic respiration I (cytochrome c)
Avi_2093	PWY-4521	arsenite oxidation I (respiratory)
Avi_2093	PWY-6692	Fe(II) oxidation
Avi_2093	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Avi_2100	PWY-4041	&gamma;-glutamyl cycle
Avi_2100	PWY-5826	hypoglycin biosynthesis
Avi_2107	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Avi_2107	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Avi_2109	PWY-1042	glycolysis IV (plant cytosol)
Avi_2109	PWY-1622	formaldehyde assimilation I (serine pathway)
Avi_2109	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Avi_2109	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_2109	PWY-5723	Rubisco shunt
Avi_2109	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_2109	PWY-6886	1-butanol autotrophic biosynthesis
Avi_2109	PWY-6901	superpathway of glucose and xylose degradation
Avi_2109	PWY-7003	glycerol degradation to butanol
Avi_2109	PWY-7124	ethylene biosynthesis V (engineered)
Avi_2109	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Avi_2120	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Avi_2120	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Avi_2123	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Avi_2123	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Avi_2123	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Avi_2131	PWY-7560	methylerythritol phosphate pathway II
Avi_2146	PWY-5194	siroheme biosynthesis
Avi_2146	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Avi_2148	PWY-6683	sulfate reduction III (assimilatory)
Avi_2154	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Avi_2154	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Avi_2155	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Avi_2155	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Avi_2155	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_2155	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Avi_2155	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Avi_2155	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Avi_2165	PWY-6826	phosphatidylcholine biosynthesis VI
Avi_2170	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Avi_2171	PWY-6749	CMP-legionaminate biosynthesis I
Avi_2207	PWY-5663	tetrahydrobiopterin biosynthesis I
Avi_2207	PWY-5664	tetrahydrobiopterin biosynthesis II
Avi_2207	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Avi_2207	PWY-6703	preQ<sub>0</sub> biosynthesis
Avi_2207	PWY-6983	tetrahydrobiopterin biosynthesis III
Avi_2207	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Avi_2215	PWY-5316	nicotine biosynthesis
Avi_2215	PWY-7342	superpathway of nicotine biosynthesis
Avi_2216	PWY-5316	nicotine biosynthesis
Avi_2216	PWY-7342	superpathway of nicotine biosynthesis
Avi_2217	PWY-5316	nicotine biosynthesis
Avi_2217	PWY-5381	pyridine nucleotide cycling (plants)
Avi_2217	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Avi_2217	PWY-7342	superpathway of nicotine biosynthesis
Avi_2230	PWY-1042	glycolysis IV (plant cytosol)
Avi_2230	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_2230	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_2230	PWY-7003	glycerol degradation to butanol
Avi_2233	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Avi_2233	PWY-7177	UTP and CTP dephosphorylation II
Avi_2233	PWY-7185	UTP and CTP dephosphorylation I
Avi_2246	PWY-6614	tetrahydrofolate biosynthesis
Avi_2247	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Avi_2247	PWY-6148	tetrahydromethanopterin biosynthesis
Avi_2247	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Avi_2247	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Avi_2248	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Avi_2248	PWY-6148	tetrahydromethanopterin biosynthesis
Avi_2248	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Avi_2248	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Avi_2283	PWY-5386	methylglyoxal degradation I
Avi_2375	PWY-381	nitrate reduction II (assimilatory)
Avi_2375	PWY-5675	nitrate reduction V (assimilatory)
Avi_2375	PWY-6549	L-glutamine biosynthesis III
Avi_2375	PWY-6963	ammonia assimilation cycle I
Avi_2375	PWY-6964	ammonia assimilation cycle II
Avi_2378	PWY-6938	NADH repair
Avi_2414	PWY-5101	L-isoleucine biosynthesis II
Avi_2414	PWY-5103	L-isoleucine biosynthesis III
Avi_2414	PWY-5104	L-isoleucine biosynthesis IV
Avi_2414	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Avi_2417	PWY-6123	inosine-5'-phosphate biosynthesis I
Avi_2417	PWY-6124	inosine-5'-phosphate biosynthesis II
Avi_2417	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Avi_2417	PWY-7234	inosine-5'-phosphate biosynthesis III
Avi_2419	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Avi_2419	PWY-5723	Rubisco shunt
Avi_2434	PWY-6823	molybdenum cofactor biosynthesis
Avi_2434	PWY-6891	thiazole biosynthesis II (Bacillus)
Avi_2434	PWY-6892	thiazole biosynthesis I (E. coli)
Avi_2434	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Avi_2440	PWY-6823	molybdenum cofactor biosynthesis
Avi_2440	PWY-6891	thiazole biosynthesis II (Bacillus)
Avi_2440	PWY-6892	thiazole biosynthesis I (E. coli)
Avi_2440	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Avi_2450	PWY-6700	queuosine biosynthesis
Avi_2451	PWY-6700	queuosine biosynthesis
Avi_2473	PWY-40	putrescine biosynthesis I
Avi_2473	PWY-6305	putrescine biosynthesis IV
Avi_2506	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Avi_2506	PWY-3162	L-tryptophan degradation V (side chain pathway)
Avi_2506	PWY-5057	L-valine degradation II
Avi_2506	PWY-5076	L-leucine degradation III
Avi_2506	PWY-5078	L-isoleucine degradation II
Avi_2506	PWY-5079	L-phenylalanine degradation III
Avi_2506	PWY-5082	L-methionine degradation III
Avi_2506	PWY-5480	pyruvate fermentation to ethanol I
Avi_2506	PWY-5486	pyruvate fermentation to ethanol II
Avi_2506	PWY-5751	phenylethanol biosynthesis
Avi_2506	PWY-6028	acetoin degradation
Avi_2506	PWY-6313	serotonin degradation
Avi_2506	PWY-6333	acetaldehyde biosynthesis I
Avi_2506	PWY-6342	noradrenaline and adrenaline degradation
Avi_2506	PWY-6587	pyruvate fermentation to ethanol III
Avi_2506	PWY-6802	salidroside biosynthesis
Avi_2506	PWY-6871	3-methylbutanol biosynthesis
Avi_2506	PWY-7013	L-1,2-propanediol degradation
Avi_2506	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Avi_2506	PWY-7118	chitin degradation to ethanol
Avi_2506	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Avi_2506	PWY-7557	dehydrodiconiferyl alcohol degradation
Avi_2510	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Avi_2514	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Avi_2514	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Avi_2514	PWY-5989	stearate biosynthesis II (bacteria and plants)
Avi_2514	PWY-5994	palmitate biosynthesis I (animals and fungi)
Avi_2514	PWY-6113	superpathway of mycolate biosynthesis
Avi_2514	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Avi_2514	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Avi_2514	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Avi_2514	PWYG-321	mycolate biosynthesis
Avi_2542	PWY-6936	seleno-amino acid biosynthesis
Avi_2542	PWY-7274	D-cycloserine biosynthesis
Avi_2549	PWY-6936	seleno-amino acid biosynthesis
Avi_2560	PWY-6019	pseudouridine degradation
Avi_2569	PWY-6823	molybdenum cofactor biosynthesis
Avi_2599	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Avi_2599	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Avi_2599	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Avi_2599	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Avi_2599	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_2599	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_2599	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Avi_2599	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Avi_2616	PWY-6825	phosphatidylcholine biosynthesis V
Avi_2622	PWY-5443	aminopropanol phosphate biosynthesis I
Avi_2624	PWY-5194	siroheme biosynthesis
Avi_2624	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Avi_2627	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Avi_2635	PWY-5194	siroheme biosynthesis
Avi_2635	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Avi_2636	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Avi_2637	PWY-5194	siroheme biosynthesis
Avi_2637	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Avi_2638	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Avi_2641	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Avi_2646	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Avi_2646	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Avi_2646	PWY-6268	adenosylcobalamin salvage from cobalamin
Avi_2646	PWY-6269	adenosylcobalamin salvage from cobinamide II
Avi_2650	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Avi_2650	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Avi_2650	PWY-6269	adenosylcobalamin salvage from cobinamide II
Avi_2664	PWY-5381	pyridine nucleotide cycling (plants)
Avi_2664	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Avi_2664	PWY-6596	adenosine nucleotides degradation I
Avi_2664	PWY-6606	guanosine nucleotides degradation II
Avi_2664	PWY-6607	guanosine nucleotides degradation I
Avi_2664	PWY-6608	guanosine nucleotides degradation III
Avi_2664	PWY-7185	UTP and CTP dephosphorylation I
Avi_2665	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Avi_2778	PWY-5101	L-isoleucine biosynthesis II
Avi_2778	PWY-5103	L-isoleucine biosynthesis III
Avi_2778	PWY-5104	L-isoleucine biosynthesis IV
Avi_2778	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Avi_2787	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_2787	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_2801	PWY-5101	L-isoleucine biosynthesis II
Avi_2801	PWY-5103	L-isoleucine biosynthesis III
Avi_2801	PWY-5104	L-isoleucine biosynthesis IV
Avi_2801	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Avi_2801	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Avi_2801	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Avi_2801	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Avi_2802	PWY-5101	L-isoleucine biosynthesis II
Avi_2802	PWY-5103	L-isoleucine biosynthesis III
Avi_2802	PWY-5104	L-isoleucine biosynthesis IV
Avi_2802	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Avi_2802	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Avi_2802	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Avi_2802	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Avi_2808	PWY-2781	<i>cis</i>-zeatin biosynthesis
Avi_2819	PWY-3841	folate transformations II
Avi_2819	PWY-6614	tetrahydrofolate biosynthesis
Avi_2822	PWY-3841	folate transformations II
Avi_2822	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Avi_2822	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Avi_2822	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Avi_2822	PWY-7199	pyrimidine deoxyribonucleosides salvage
Avi_2822	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Avi_2829	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_2829	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_2847	PWY-6654	phosphopantothenate biosynthesis III
Avi_2849	PWY-5316	nicotine biosynthesis
Avi_2849	PWY-7342	superpathway of nicotine biosynthesis
Avi_2887	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_2887	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_2889	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_2889	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_2890	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_2890	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_2891	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Avi_2891	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Avi_2891	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Avi_2891	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Avi_2893	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_2893	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_2894	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Avi_2894	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Avi_2894	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Avi_2895	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_2895	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_2909	PWY-1042	glycolysis IV (plant cytosol)
Avi_2909	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Avi_2909	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_2909	PWY-6531	mannitol cycle
Avi_2909	PWY-7385	1,3-propanediol biosynthesis (engineered)
Avi_2925	PWY-2201	folate transformations I
Avi_2925	PWY-3841	folate transformations II
Avi_2966	PWY-2201	folate transformations I
Avi_2966	PWY-3841	folate transformations II
Avi_3088	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Avi_3088	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Avi_3092	PWY-7533	gliotoxin biosynthesis
Avi_3108	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Avi_3111	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_3111	PWY-5686	UMP biosynthesis
Avi_3111	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_3122	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_3122	PWY-5686	UMP biosynthesis
Avi_3122	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_3168	PWY-3341	L-proline biosynthesis III
Avi_3168	PWY-4981	L-proline biosynthesis II (from arginine)
Avi_3168	PWY-6344	L-ornithine degradation II (Stickland reaction)
Avi_3201	PWY-6605	adenine and adenosine salvage II
Avi_3201	PWY-6610	adenine and adenosine salvage IV
Avi_3205	PWY-3781	aerobic respiration I (cytochrome c)
Avi_3205	PWY-6692	Fe(II) oxidation
Avi_3205	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Avi_3205	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Avi_3221	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Avi_3221	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Avi_3241	PWY-4061	glutathione-mediated detoxification I
Avi_3241	PWY-6842	glutathione-mediated detoxification II
Avi_3241	PWY-7112	4-hydroxy-2-nonenal detoxification
Avi_3241	PWY-7533	gliotoxin biosynthesis
Avi_3249	PWY-6871	3-methylbutanol biosynthesis
Avi_3259	PWY-5958	acridone alkaloid biosynthesis
Avi_3259	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Avi_3259	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Avi_3262	PWY-6700	queuosine biosynthesis
Avi_3272	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Avi_3272	PWY-2161	folate polyglutamylation
Avi_3272	PWY-2201	folate transformations I
Avi_3272	PWY-3841	folate transformations II
Avi_3277	PWY-7199	pyrimidine deoxyribonucleosides salvage
Avi_3297	PWY-6610	adenine and adenosine salvage IV
Avi_3316	PWY-4261	glycerol degradation I
Avi_3320	PWY-5497	purine nucleobases degradation II (anaerobic)
Avi_3320	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Avi_3320	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Avi_3320	PWY-6596	adenosine nucleotides degradation I
Avi_3320	PWY-6606	guanosine nucleotides degradation II
Avi_3320	PWY-6607	guanosine nucleotides degradation I
Avi_3320	PWY-6608	guanosine nucleotides degradation III
Avi_3320	PWY-6999	theophylline degradation
Avi_3321	PWY-5497	purine nucleobases degradation II (anaerobic)
Avi_3321	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Avi_3321	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Avi_3321	PWY-6596	adenosine nucleotides degradation I
Avi_3321	PWY-6606	guanosine nucleotides degradation II
Avi_3321	PWY-6607	guanosine nucleotides degradation I
Avi_3321	PWY-6608	guanosine nucleotides degradation III
Avi_3321	PWY-6999	theophylline degradation
Avi_3326	PWY-5497	purine nucleobases degradation II (anaerobic)
Avi_3326	PWY-6606	guanosine nucleotides degradation II
Avi_3326	PWY-6608	guanosine nucleotides degradation III
Avi_3326	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Avi_3331	PWY-4983	L-citrulline-nitric oxide cycle
Avi_3331	PWY-4984	urea cycle
Avi_3331	PWY-5	canavanine biosynthesis
Avi_3331	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_3331	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_3340	PWY-5691	urate degradation to allantoin I
Avi_3340	PWY-7394	urate degradation to allantoin II
Avi_3341	PWY-5694	allantoin degradation to glyoxylate I
Avi_3341	PWY-5705	allantoin degradation to glyoxylate III
Avi_3344	PWY-381	nitrate reduction II (assimilatory)
Avi_3344	PWY-5675	nitrate reduction V (assimilatory)
Avi_3344	PWY-6549	L-glutamine biosynthesis III
Avi_3344	PWY-6963	ammonia assimilation cycle I
Avi_3344	PWY-6964	ammonia assimilation cycle II
Avi_3347	PWY-5691	urate degradation to allantoin I
Avi_3347	PWY-7394	urate degradation to allantoin II
Avi_3356	PWY-5532	adenosine nucleotides degradation IV
Avi_3366	PWY-1622	formaldehyde assimilation I (serine pathway)
Avi_3366	PWY-181	photorespiration
Avi_3366	PWY-2161	folate polyglutamylation
Avi_3366	PWY-2201	folate transformations I
Avi_3366	PWY-3661	glycine betaine degradation I
Avi_3366	PWY-3661-1	glycine betaine degradation II (mammalian)
Avi_3366	PWY-3841	folate transformations II
Avi_3366	PWY-5497	purine nucleobases degradation II (anaerobic)
Avi_3412	PWY-5757	fosfomycin biosynthesis
Avi_3412	PWY-6322	phosphinothricin tripeptide biosynthesis
Avi_3412	PWY-6682	dehydrophos biosynthesis
Avi_3412	PWY-6839	2-aminoethylphosphonate biosynthesis
Avi_3412	PWY-7419	FR-900098 and FR-33289 antibiotics biosynthesis
Avi_3412	PWY-7510	rhizocticin A and B biosynthesis
Avi_3414	PWY-5757	fosfomycin biosynthesis
Avi_3414	PWY-6322	phosphinothricin tripeptide biosynthesis
Avi_3414	PWY-6682	dehydrophos biosynthesis
Avi_3414	PWY-6839	2-aminoethylphosphonate biosynthesis
Avi_3414	PWY-7510	rhizocticin A and B biosynthesis
Avi_3477	PWY-5704	urea degradation II
Avi_3482	PWY-5704	urea degradation II
Avi_3485	PWY-5704	urea degradation II
Avi_3519	PWY-5340	sulfate activation for sulfonation
Avi_3544	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Avi_3547	PWY-6167	flavin biosynthesis II (archaea)
Avi_3554	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Avi_3554	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Avi_3564	PWY-6981	chitin biosynthesis
Avi_3574	PWY-4261	glycerol degradation I
Avi_3578	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Avi_3629	PWY-6749	CMP-legionaminate biosynthesis I
Avi_3637	PWY-1042	glycolysis IV (plant cytosol)
Avi_3637	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_3637	PWY-6901	superpathway of glucose and xylose degradation
Avi_3637	PWY-7003	glycerol degradation to butanol
Avi_3638	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Avi_3638	PWY-5723	Rubisco shunt
Avi_3638	PWY-6891	thiazole biosynthesis II (Bacillus)
Avi_3638	PWY-6892	thiazole biosynthesis I (E. coli)
Avi_3638	PWY-6901	superpathway of glucose and xylose degradation
Avi_3638	PWY-7560	methylerythritol phosphate pathway II
Avi_3651	PWY-1042	glycolysis IV (plant cytosol)
Avi_3651	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_3651	PWY-6886	1-butanol autotrophic biosynthesis
Avi_3651	PWY-6901	superpathway of glucose and xylose degradation
Avi_3651	PWY-7003	glycerol degradation to butanol
Avi_3652	PWY-1042	glycolysis IV (plant cytosol)
Avi_3652	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Avi_3652	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_3652	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_3652	PWY-7385	1,3-propanediol biosynthesis (engineered)
Avi_3672	PWY-2301	<i>myo</i>-inositol biosynthesis
Avi_3672	PWY-4702	phytate degradation I
Avi_3672	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Avi_3675	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Avi_3675	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Avi_3675	PWY-6897	thiamin salvage II
Avi_3675	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Avi_3675	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Avi_3675	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Avi_3675	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Avi_3683	PWY-6123	inosine-5'-phosphate biosynthesis I
Avi_3683	PWY-7234	inosine-5'-phosphate biosynthesis III
Avi_3690	PWY-1042	glycolysis IV (plant cytosol)
Avi_3690	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Avi_3690	PWY-5484	glycolysis II (from fructose 6-phosphate)
Avi_3690	PWY-5723	Rubisco shunt
Avi_3690	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_3690	PWY-6886	1-butanol autotrophic biosynthesis
Avi_3690	PWY-6901	superpathway of glucose and xylose degradation
Avi_3690	PWY-7003	glycerol degradation to butanol
Avi_3690	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Avi_3690	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Avi_3703	PWY-5958	acridone alkaloid biosynthesis
Avi_3703	PWY-6543	4-aminobenzoate biosynthesis
Avi_3703	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Avi_3703	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Avi_3703	PWY-6722	candicidin biosynthesis
Avi_3716	PWY-6703	preQ<sub>0</sub> biosynthesis
Avi_3719	PWY-6703	preQ<sub>0</sub> biosynthesis
Avi_3724	PWY-3801	sucrose degradation II (sucrose synthase)
Avi_3724	PWY-6527	stachyose degradation
Avi_3724	PWY-6981	chitin biosynthesis
Avi_3724	PWY-7238	sucrose biosynthesis II
Avi_3724	PWY-7343	UDP-glucose biosynthesis
Avi_3751	PWY-5659	GDP-mannose biosynthesis
Avi_3751	PWY-6073	alginate biosynthesis I (algal)
Avi_3751	PWY-6082	alginate biosynthesis II (bacterial)
Avi_3751	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Avi_3758	PWY-5941	glycogen degradation II (eukaryotic)
Avi_3758	PWY-622	starch biosynthesis
Avi_3758	PWY-6731	starch degradation III
Avi_3758	PWY-6737	starch degradation V
Avi_3758	PWY-7238	sucrose biosynthesis II
Avi_3760	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Avi_3760	PWY-622	starch biosynthesis
Avi_3761	PWY-622	starch biosynthesis
Avi_3762	PWY-622	starch biosynthesis
Avi_3763	PWY-6749	CMP-legionaminate biosynthesis I
Avi_3770	PWY-3781	aerobic respiration I (cytochrome c)
Avi_3770	PWY-4521	arsenite oxidation I (respiratory)
Avi_3770	PWY-6692	Fe(II) oxidation
Avi_3770	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Avi_3774	PWY-3661	glycine betaine degradation I
Avi_3774	PWY-4722	creatinine degradation II
Avi_3776	PWY-3661	glycine betaine degradation I
Avi_3776	PWY-4722	creatinine degradation II
Avi_3777	PWY-3661	glycine betaine degradation I
Avi_3777	PWY-4722	creatinine degradation II
Avi_3778	PWY-3661	glycine betaine degradation I
Avi_3778	PWY-4722	creatinine degradation II
Avi_3794	PWY-6167	flavin biosynthesis II (archaea)
Avi_3816	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Avi_3816	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Avi_3816	PWY-7242	D-fructuronate degradation
Avi_3816	PWY-7310	D-glucosaminate degradation
Avi_3827	PWY-3121	linamarin degradation
Avi_3827	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Avi_3827	PWY-6002	lotaustralin degradation
Avi_3827	PWY-6788	cellulose degradation II (fungi)
Avi_3827	PWY-7089	taxiphyllin bioactivation
Avi_3827	PWY-7091	linustatin bioactivation
Avi_3827	PWY-7092	neolinustatin bioactivation
Avi_3833	PWY-4261	glycerol degradation I
Avi_3850	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Avi_3850	PWY-5723	Rubisco shunt
Avi_3858	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Avi_3882	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_3883	PWY-7399	methylphosphonate degradation II
Avi_3889	PWY-7533	gliotoxin biosynthesis
Avi_3892	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Avi_3892	PWY-7248	pectin degradation III
Avi_3894	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Avi_3895	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Avi_3897	PWY-7242	D-fructuronate degradation
Avi_3909	PWY-5101	L-isoleucine biosynthesis II
Avi_3909	PWY-5103	L-isoleucine biosynthesis III
Avi_3909	PWY-5104	L-isoleucine biosynthesis IV
Avi_3909	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Avi_3914	PWY-7130	L-glucose degradation
Avi_3915	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Avi_3915	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Avi_3915	PWY-7242	D-fructuronate degradation
Avi_3915	PWY-7310	D-glucosaminate degradation
Avi_3957	PWY-2941	L-lysine biosynthesis II
Avi_3957	PWY-2942	L-lysine biosynthesis III
Avi_3957	PWY-5097	L-lysine biosynthesis VI
Avi_3957	PWY-6559	spermidine biosynthesis II
Avi_3957	PWY-6562	norspermidine biosynthesis
Avi_3957	PWY-7153	grixazone biosynthesis
Avi_3965	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Avi_3965	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Avi_3965	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Avi_3965	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Avi_3965	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Avi_3965	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Avi_3965	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Avi_3965	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Avi_3965	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Avi_3965	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Avi_3976	PWY-6502	oxidized GTP and dGTP detoxification
Avi_3979	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_4008	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Avi_4008	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Avi_4008	PWY-6268	adenosylcobalamin salvage from cobalamin
Avi_4008	PWY-6269	adenosylcobalamin salvage from cobinamide II
Avi_4015	PWY-1361	benzoyl-CoA degradation I (aerobic)
Avi_4015	PWY-5109	2-methylbutanoate biosynthesis
Avi_4015	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Avi_4015	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Avi_4015	PWY-5177	glutaryl-CoA degradation
Avi_4015	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Avi_4015	PWY-6435	4-hydroxybenzoate biosynthesis V
Avi_4015	PWY-6583	pyruvate fermentation to butanol I
Avi_4015	PWY-6863	pyruvate fermentation to hexanol
Avi_4015	PWY-6883	pyruvate fermentation to butanol II
Avi_4015	PWY-6944	androstenedione degradation
Avi_4015	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Avi_4015	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Avi_4015	PWY-7007	methyl ketone biosynthesis
Avi_4015	PWY-7046	4-coumarate degradation (anaerobic)
Avi_4015	PWY-7094	fatty acid salvage
Avi_4015	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Avi_4015	PWY-735	jasmonic acid biosynthesis
Avi_4015	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Avi_4017	PWY-4983	L-citrulline-nitric oxide cycle
Avi_4017	PWY-4984	urea cycle
Avi_4017	PWY-5	canavanine biosynthesis
Avi_4017	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_4017	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_4020	PWY-2941	L-lysine biosynthesis II
Avi_4020	PWY-2942	L-lysine biosynthesis III
Avi_4020	PWY-5097	L-lysine biosynthesis VI
Avi_4024	PWY-6599	guanine and guanosine salvage II
Avi_4024	PWY-6609	adenine and adenosine salvage III
Avi_4024	PWY-6610	adenine and adenosine salvage IV
Avi_4024	PWY-6620	guanine and guanosine salvage
Avi_4033	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Avi_4036	PWY-5386	methylglyoxal degradation I
Avi_4045	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Avi_4046	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Avi_4051	PWY-6164	3-dehydroquinate biosynthesis I
Avi_4053	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Avi_4057	PWY-4381	fatty acid biosynthesis initiation I
Avi_4057	PWY-5743	3-hydroxypropanoate cycle
Avi_4057	PWY-5744	glyoxylate assimilation
Avi_4057	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Avi_4057	PWY-6679	jadomycin biosynthesis
Avi_4057	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Avi_4083	PWY-7560	methylerythritol phosphate pathway II
Avi_4085	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Avi_4085	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
Avi_4097	PWY-1881	formate oxidation to CO<sub>2</sub>
Avi_4097	PWY-5497	purine nucleobases degradation II (anaerobic)
Avi_4097	PWY-6696	oxalate degradation III
Avi_4103	PWY-5481	pyruvate fermentation to lactate
Avi_4103	PWY-6901	superpathway of glucose and xylose degradation
Avi_4106	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Avi_4108	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Avi_4116	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Avi_4116	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Avi_4121	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Avi_4122	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Avi_4124	PWY-5392	reductive TCA cycle II
Avi_4124	PWY-5537	pyruvate fermentation to acetate V
Avi_4124	PWY-5538	pyruvate fermentation to acetate VI
Avi_4124	PWY-5690	TCA cycle II (plants and fungi)
Avi_4124	PWY-5913	TCA cycle VI (obligate autotrophs)
Avi_4124	PWY-6728	methylaspartate cycle
Avi_4124	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_4124	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Avi_4127	PWY-5392	reductive TCA cycle II
Avi_4127	PWY-5537	pyruvate fermentation to acetate V
Avi_4127	PWY-5538	pyruvate fermentation to acetate VI
Avi_4127	PWY-5690	TCA cycle II (plants and fungi)
Avi_4127	PWY-5913	TCA cycle VI (obligate autotrophs)
Avi_4127	PWY-6728	methylaspartate cycle
Avi_4127	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_4127	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Avi_4129	PWY-1622	formaldehyde assimilation I (serine pathway)
Avi_4129	PWY-5392	reductive TCA cycle II
Avi_4129	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Avi_4129	PWY-5690	TCA cycle II (plants and fungi)
Avi_4129	PWY-5913	TCA cycle VI (obligate autotrophs)
Avi_4129	PWY-6728	methylaspartate cycle
Avi_4129	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_4129	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Avi_4129	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Avi_4134	PWY-3781	aerobic respiration I (cytochrome c)
Avi_4134	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Avi_4134	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Avi_4134	PWY-5690	TCA cycle II (plants and fungi)
Avi_4134	PWY-6728	methylaspartate cycle
Avi_4134	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_4134	PWY-7254	TCA cycle VII (acetate-producers)
Avi_4134	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Avi_4135	PWY-3781	aerobic respiration I (cytochrome c)
Avi_4135	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Avi_4135	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Avi_4135	PWY-5690	TCA cycle II (plants and fungi)
Avi_4135	PWY-6728	methylaspartate cycle
Avi_4135	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Avi_4135	PWY-7254	TCA cycle VII (acetate-producers)
Avi_4135	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Avi_4143	PWY-5667	CDP-diacylglycerol biosynthesis I
Avi_4143	PWY-5981	CDP-diacylglycerol biosynthesis III
Avi_4145	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Avi_4145	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Avi_4146	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Avi_4146	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Avi_4161	PWY-4983	L-citrulline-nitric oxide cycle
Avi_4161	PWY-4984	urea cycle
Avi_4161	PWY-5	canavanine biosynthesis
Avi_4161	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_4161	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_4174	PWY-7158	L-phenylalanine degradation V
Avi_4198	PWY-2941	L-lysine biosynthesis II
Avi_4198	PWY-5097	L-lysine biosynthesis VI
Avi_4204	PWY-3461	L-tyrosine biosynthesis II
Avi_4204	PWY-3462	L-phenylalanine biosynthesis II
Avi_4204	PWY-6120	L-tyrosine biosynthesis III
Avi_4204	PWY-6627	salinosporamide A biosynthesis
Avi_4208	PWY-6829	tRNA methylation (yeast)
Avi_4208	PWY-7285	methylwyosine biosynthesis
Avi_4208	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Avi_4249	PWY-2723	trehalose degradation V
Avi_4249	PWY-6317	galactose degradation I (Leloir pathway)
Avi_4249	PWY-6737	starch degradation V
Avi_4260	PWY-6898	thiamin salvage III
Avi_4260	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Avi_4260	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Avi_4279	PWY-5381	pyridine nucleotide cycling (plants)
Avi_4279	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Avi_4292	PWY-6123	inosine-5'-phosphate biosynthesis I
Avi_4292	PWY-6124	inosine-5'-phosphate biosynthesis II
Avi_4292	PWY-7234	inosine-5'-phosphate biosynthesis III
Avi_4322	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Avi_4322	PWY-6853	ethylene biosynthesis II (microbes)
Avi_4322	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Avi_4332	PWY-7560	methylerythritol phosphate pathway II
Avi_4345	PWY-5676	acetyl-CoA fermentation to butanoate II
Avi_4345	PWY-5741	ethylmalonyl-CoA pathway
Avi_4345	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Avi_4359	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Avi_4363	PWY-2941	L-lysine biosynthesis II
Avi_4363	PWY-2942	L-lysine biosynthesis III
Avi_4363	PWY-5097	L-lysine biosynthesis VI
Avi_4363	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Avi_4363	PWY-6559	spermidine biosynthesis II
Avi_4363	PWY-6562	norspermidine biosynthesis
Avi_4363	PWY-7153	grixazone biosynthesis
Avi_4363	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Avi_4366	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Avi_4366	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_4366	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Avi_4366	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Avi_4367	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Avi_4367	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Avi_4368	PWY-5022	4-aminobutanoate degradation V
Avi_4368	PWY-6728	methylaspartate cycle
Avi_4368	PWY-7126	ethylene biosynthesis IV
Avi_4375	PWY-5750	itaconate biosynthesis
Avi_4375	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Avi_4375	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Avi_4377	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Avi_4377	PWY-7118	chitin degradation to ethanol
Avi_4380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Avi_4391	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Avi_4393	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Avi_4393	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
