Alfi_0028 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Alfi_0028 PWY-622 starch biosynthesis Alfi_0040 PWY-723 alkylnitronates degradation Alfi_0052 PWY-6902 chitin degradation II Alfi_0071 PWY-6902 chitin degradation II Alfi_0077 PWY-6902 chitin degradation II Alfi_0083 PWY-5971 palmitate biosynthesis II (bacteria and plants) Alfi_0083 PWY-5973 cis-vaccenate biosynthesis Alfi_0083 PWY-5989 stearate biosynthesis II (bacteria and plants) Alfi_0083 PWY-5994 palmitate biosynthesis I (animals and fungi) Alfi_0083 PWY-6113 superpathway of mycolate biosynthesis Alfi_0083 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Alfi_0083 PWY-6519 8-amino-7-oxononanoate biosynthesis I Alfi_0083 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Alfi_0083 PWYG-321 mycolate biosynthesis Alfi_0115 PWY-7176 UTP and CTP de novo biosynthesis Alfi_0115 PWY-7177 UTP and CTP dephosphorylation II Alfi_0115 PWY-7185 UTP and CTP dephosphorylation I Alfi_0121 PWY-5482 pyruvate fermentation to acetate II Alfi_0121 PWY-5485 pyruvate fermentation to acetate IV Alfi_0121 PWY-5497 purine nucleobases degradation II (anaerobic) Alfi_0122 PWY-1281 sulfoacetaldehyde degradation I Alfi_0122 PWY-5482 pyruvate fermentation to acetate II Alfi_0122 PWY-5485 pyruvate fermentation to acetate IV Alfi_0122 PWY-5497 purine nucleobases degradation II (anaerobic) Alfi_0122 PWY-6637 sulfolactate degradation II Alfi_0123 PWY-5482 pyruvate fermentation to acetate II Alfi_0123 PWY-5485 pyruvate fermentation to acetate IV Alfi_0123 PWY-5497 purine nucleobases degradation II (anaerobic) Alfi_0125 PWY-1042 glycolysis IV (plant cytosol) Alfi_0125 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Alfi_0125 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_0125 PWY-5723 Rubisco shunt Alfi_0125 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Alfi_0125 PWY-6886 1-butanol autotrophic biosynthesis Alfi_0125 PWY-6901 superpathway of glucose and xylose degradation Alfi_0125 PWY-7003 glycerol degradation to butanol Alfi_0125 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Alfi_0125 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Alfi_0126 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Alfi_0126 PWY-6416 quinate degradation II Alfi_0126 PWY-6707 gallate biosynthesis Alfi_0127 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Alfi_0127 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Alfi_0127 PWY-6896 thiamin salvage I Alfi_0127 PWY-6897 thiamin salvage II Alfi_0129 PWY-6703 preQ0 biosynthesis Alfi_0130 PWY-6599 guanine and guanosine salvage II Alfi_0130 PWY-6609 adenine and adenosine salvage III Alfi_0130 PWY-6610 adenine and adenosine salvage IV Alfi_0130 PWY-6620 guanine and guanosine salvage Alfi_0142 PWY-5663 tetrahydrobiopterin biosynthesis I Alfi_0142 PWY-5664 tetrahydrobiopterin biosynthesis II Alfi_0142 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Alfi_0142 PWY-6703 preQ0 biosynthesis Alfi_0142 PWY-6983 tetrahydrobiopterin biosynthesis III Alfi_0142 PWY-7442 drosopterin and aurodrosopterin biosynthesis Alfi_0170 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Alfi_0171 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Alfi_0243 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Alfi_0243 PWY-6549 L-glutamine biosynthesis III Alfi_0243 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Alfi_0243 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Alfi_0257 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Alfi_0277 PWY-723 alkylnitronates degradation Alfi_0316 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Alfi_0326 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Alfi_0349 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_0352 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Alfi_0359 PWY-7205 CMP phosphorylation Alfi_0363 PWY-6454 vancomycin resistance I Alfi_0363 PWY-6455 vancomycin resistance II Alfi_0393 PWY-5839 menaquinol-7 biosynthesis Alfi_0393 PWY-5851 demethylmenaquinol-9 biosynthesis Alfi_0393 PWY-5852 demethylmenaquinol-8 biosynthesis I Alfi_0393 PWY-5853 demethylmenaquinol-6 biosynthesis I Alfi_0393 PWY-5890 menaquinol-10 biosynthesis Alfi_0393 PWY-5891 menaquinol-11 biosynthesis Alfi_0393 PWY-5892 menaquinol-12 biosynthesis Alfi_0393 PWY-5895 menaquinol-13 biosynthesis Alfi_0396 PWY-5041 S-adenosyl-L-methionine cycle II Alfi_0396 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Alfi_0409 PWY-6891 thiazole biosynthesis II (Bacillus) Alfi_0409 PWY-6892 thiazole biosynthesis I (E. coli) Alfi_0409 PWY-7560 methylerythritol phosphate pathway II Alfi_0414 PWY-2201 folate transformations I Alfi_0414 PWY-3841 folate transformations II Alfi_0415 PWY-2201 folate transformations I Alfi_0415 PWY-3841 folate transformations II Alfi_0418 PWY-5198 factor 420 biosynthesis Alfi_0433 PWY-7219 adenosine ribonucleotides de novo biosynthesis Alfi_0434 PWY-7219 adenosine ribonucleotides de novo biosynthesis Alfi_0439 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Alfi_0439 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Alfi_0603 PWY-4381 fatty acid biosynthesis initiation I Alfi_0608 PWY-1042 glycolysis IV (plant cytosol) Alfi_0608 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_0608 PWY-6901 superpathway of glucose and xylose degradation Alfi_0608 PWY-7003 glycerol degradation to butanol Alfi_0612 PWY-6123 inosine-5'-phosphate biosynthesis I Alfi_0612 PWY-6124 inosine-5'-phosphate biosynthesis II Alfi_0612 PWY-7219 adenosine ribonucleotides de novo biosynthesis Alfi_0612 PWY-7234 inosine-5'-phosphate biosynthesis III Alfi_0719 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Alfi_0719 PWY-5723 Rubisco shunt Alfi_0861 PWY-101 photosynthesis light reactions Alfi_0861 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Alfi_0889 PWY-6854 ethylene biosynthesis III (microbes) Alfi_0902 PWY-2941 L-lysine biosynthesis II Alfi_0902 PWY-2942 L-lysine biosynthesis III Alfi_0902 PWY-5097 L-lysine biosynthesis VI Alfi_0902 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Alfi_0902 PWY-6559 spermidine biosynthesis II Alfi_0902 PWY-6562 norspermidine biosynthesis Alfi_0902 PWY-7153 grixazone biosynthesis Alfi_0902 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Alfi_0907 PWY-2941 L-lysine biosynthesis II Alfi_0907 PWY-2942 L-lysine biosynthesis III Alfi_0907 PWY-5097 L-lysine biosynthesis VI Alfi_0907 PWY-6559 spermidine biosynthesis II Alfi_0907 PWY-6562 norspermidine biosynthesis Alfi_0907 PWY-7153 grixazone biosynthesis Alfi_0911 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Alfi_0911 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Alfi_0936 PWY-1622 formaldehyde assimilation I (serine pathway) Alfi_0936 PWY-5392 reductive TCA cycle II Alfi_0936 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Alfi_0936 PWY-5690 TCA cycle II (plants and fungi) Alfi_0936 PWY-5913 TCA cycle VI (obligate autotrophs) Alfi_0936 PWY-6728 methylaspartate cycle Alfi_0936 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Alfi_0936 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Alfi_0936 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Alfi_1061 PWY-5704 urea degradation II Alfi_1062 PWY-5704 urea degradation II Alfi_1063 PWY-5704 urea degradation II Alfi_1065 PWY-1042 glycolysis IV (plant cytosol) Alfi_1065 PWY-1622 formaldehyde assimilation I (serine pathway) Alfi_1065 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Alfi_1065 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_1065 PWY-5723 Rubisco shunt Alfi_1065 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Alfi_1065 PWY-6886 1-butanol autotrophic biosynthesis Alfi_1065 PWY-6901 superpathway of glucose and xylose degradation Alfi_1065 PWY-7003 glycerol degradation to butanol Alfi_1065 PWY-7124 ethylene biosynthesis V (engineered) Alfi_1065 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Alfi_1074 PWY-6902 chitin degradation II Alfi_1077 PWY-6902 chitin degradation II Alfi_1091 PWY-6902 chitin degradation II Alfi_1101 PWY-6700 queuosine biosynthesis Alfi_1104 PWY-6902 chitin degradation II Alfi_1109 PWY-6902 chitin degradation II Alfi_1110 PWY-5316 nicotine biosynthesis Alfi_1110 PWY-7342 superpathway of nicotine biosynthesis Alfi_1121 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Alfi_1121 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Alfi_1121 PWY-6896 thiamin salvage I Alfi_1121 PWY-6897 thiamin salvage II Alfi_1122 PWY-7219 adenosine ribonucleotides de novo biosynthesis Alfi_1133 PWY-7193 pyrimidine ribonucleosides salvage I Alfi_1150 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Alfi_1150 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Alfi_1157 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Alfi_1157 PWY-6148 tetrahydromethanopterin biosynthesis Alfi_1157 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Alfi_1157 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Alfi_1160 PWY-6167 flavin biosynthesis II (archaea) Alfi_1160 PWY-6168 flavin biosynthesis III (fungi) Alfi_1165 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Alfi_1165 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Alfi_1165 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Alfi_1165 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Alfi_1165 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Alfi_1165 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Alfi_1165 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Alfi_1165 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Alfi_1169 PWY-1622 formaldehyde assimilation I (serine pathway) Alfi_1169 PWY-5392 reductive TCA cycle II Alfi_1169 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Alfi_1169 PWY-5690 TCA cycle II (plants and fungi) Alfi_1169 PWY-5913 TCA cycle VI (obligate autotrophs) Alfi_1169 PWY-6728 methylaspartate cycle Alfi_1169 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Alfi_1169 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Alfi_1169 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Alfi_1174 PWY-5392 reductive TCA cycle II Alfi_1174 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Alfi_1174 PWY-5690 TCA cycle II (plants and fungi) Alfi_1174 PWY-5913 TCA cycle VI (obligate autotrophs) Alfi_1174 PWY-6728 methylaspartate cycle Alfi_1174 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Alfi_1174 PWY-7254 TCA cycle VII (acetate-producers) Alfi_1174 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Alfi_1175 PWY-1042 glycolysis IV (plant cytosol) Alfi_1175 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Alfi_1175 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_1175 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Alfi_1175 PWY-7385 1,3-propanediol biosynthesis (engineered) Alfi_1183 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Alfi_1184 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Alfi_1184 PWY-3461 L-tyrosine biosynthesis II Alfi_1184 PWY-3462 L-phenylalanine biosynthesis II Alfi_1184 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Alfi_1184 PWY-6120 L-tyrosine biosynthesis III Alfi_1184 PWY-6627 salinosporamide A biosynthesis Alfi_1193 PWY-5480 pyruvate fermentation to ethanol I Alfi_1193 PWY-5485 pyruvate fermentation to acetate IV Alfi_1193 PWY-5493 reductive monocarboxylic acid cycle Alfi_1230 PWY-6891 thiazole biosynthesis II (Bacillus) Alfi_1230 PWY-6892 thiazole biosynthesis I (E. coli) Alfi_1230 PWY-7560 methylerythritol phosphate pathway II Alfi_1235 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Alfi_1235 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Alfi_1237 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Alfi_1237 PWY-5941 glycogen degradation II (eukaryotic) Alfi_1237 PWY-622 starch biosynthesis Alfi_1237 PWY-6731 starch degradation III Alfi_1237 PWY-6737 starch degradation V Alfi_1237 PWY-7238 sucrose biosynthesis II Alfi_1238 PWY-5941 glycogen degradation II (eukaryotic) Alfi_1238 PWY-6724 starch degradation II Alfi_1238 PWY-6737 starch degradation V Alfi_1238 PWY-7238 sucrose biosynthesis II Alfi_1252 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Alfi_1257 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Alfi_1257 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Alfi_1257 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Alfi_1260 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Alfi_1261 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_1263 PWY-7560 methylerythritol phosphate pathway II Alfi_1285 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Alfi_1285 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Alfi_1286 PWY-7199 pyrimidine deoxyribonucleosides salvage Alfi_1318 PWY-2161 folate polyglutamylation Alfi_1325 PWY-6902 chitin degradation II Alfi_1330 PWY-7205 CMP phosphorylation Alfi_1331 PWY-7560 methylerythritol phosphate pathway II Alfi_1336 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Alfi_1336 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Alfi_1357 PWY-6700 queuosine biosynthesis Alfi_1359 PWY-5198 factor 420 biosynthesis Alfi_1359 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II Alfi_1359 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Alfi_1375 PWY-3221 dTDP-L-rhamnose biosynthesis II Alfi_1375 PWY-6808 dTDP-D-forosamine biosynthesis Alfi_1375 PWY-6942 dTDP-D-desosamine biosynthesis Alfi_1375 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Alfi_1375 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Alfi_1375 PWY-6974 dTDP-L-olivose biosynthesis Alfi_1375 PWY-6976 dTDP-L-mycarose biosynthesis Alfi_1375 PWY-7104 dTDP-L-megosamine biosynthesis Alfi_1375 PWY-7301 dTDP-β-L-noviose biosynthesis Alfi_1375 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Alfi_1375 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Alfi_1375 PWY-7316 dTDP-N-acetylviosamine biosynthesis Alfi_1375 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Alfi_1375 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Alfi_1375 PWY-7414 dTDP-α-D-mycaminose biosynthesis Alfi_1375 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Alfi_1381 PWY-3221 dTDP-L-rhamnose biosynthesis II Alfi_1381 PWY-6808 dTDP-D-forosamine biosynthesis Alfi_1381 PWY-6942 dTDP-D-desosamine biosynthesis Alfi_1381 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Alfi_1381 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Alfi_1381 PWY-6974 dTDP-L-olivose biosynthesis Alfi_1381 PWY-6976 dTDP-L-mycarose biosynthesis Alfi_1381 PWY-7104 dTDP-L-megosamine biosynthesis Alfi_1381 PWY-7301 dTDP-β-L-noviose biosynthesis Alfi_1381 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Alfi_1381 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Alfi_1381 PWY-7316 dTDP-N-acetylviosamine biosynthesis Alfi_1381 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Alfi_1381 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Alfi_1381 PWY-7414 dTDP-α-D-mycaminose biosynthesis Alfi_1381 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Alfi_1382 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Alfi_1382 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Alfi_1382 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Alfi_1398 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_1406 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Alfi_1406 PWY-6148 tetrahydromethanopterin biosynthesis Alfi_1406 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Alfi_1406 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Alfi_1433 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Alfi_1433 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Alfi_1441 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Alfi_1441 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Alfi_1441 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Alfi_1442 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Alfi_1442 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Alfi_1450 PWY-6871 3-methylbutanol biosynthesis Alfi_1453 PWY-6871 3-methylbutanol biosynthesis Alfi_1454 PWY-7396 butanol and isobutanol biosynthesis (engineered) Alfi_1456 PWY-702 L-methionine biosynthesis II Alfi_1457 PWY-5101 L-isoleucine biosynthesis II Alfi_1457 PWY-5103 L-isoleucine biosynthesis III Alfi_1457 PWY-5104 L-isoleucine biosynthesis IV Alfi_1457 PWY-7111 pyruvate fermentation to isobutanol (engineered) Alfi_1458 PWY-5101 L-isoleucine biosynthesis II Alfi_1458 PWY-5103 L-isoleucine biosynthesis III Alfi_1458 PWY-5104 L-isoleucine biosynthesis IV Alfi_1458 PWY-5938 (R)-acetoin biosynthesis I Alfi_1458 PWY-5939 (R)-acetoin biosynthesis II Alfi_1458 PWY-6389 (S)-acetoin biosynthesis Alfi_1458 PWY-7111 pyruvate fermentation to isobutanol (engineered) Alfi_1459 PWY-5101 L-isoleucine biosynthesis II Alfi_1459 PWY-5103 L-isoleucine biosynthesis III Alfi_1459 PWY-5104 L-isoleucine biosynthesis IV Alfi_1459 PWY-5938 (R)-acetoin biosynthesis I Alfi_1459 PWY-5939 (R)-acetoin biosynthesis II Alfi_1459 PWY-6389 (S)-acetoin biosynthesis Alfi_1459 PWY-7111 pyruvate fermentation to isobutanol (engineered) Alfi_1460 PWY-5101 L-isoleucine biosynthesis II Alfi_1460 PWY-5103 L-isoleucine biosynthesis III Alfi_1460 PWY-5104 L-isoleucine biosynthesis IV Alfi_1460 PWY-7111 pyruvate fermentation to isobutanol (engineered) Alfi_1462 PWY-3821 galactose degradation III Alfi_1462 PWY-6317 galactose degradation I (Leloir pathway) Alfi_1462 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Alfi_1462 PWY-6527 stachyose degradation Alfi_1462 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Alfi_1462 PWY-7344 UDP-D-galactose biosynthesis Alfi_1463 PWY-5491 diethylphosphate degradation Alfi_1473 PWY-1042 glycolysis IV (plant cytosol) Alfi_1473 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_1473 PWY-6886 1-butanol autotrophic biosynthesis Alfi_1473 PWY-6901 superpathway of glucose and xylose degradation Alfi_1473 PWY-7003 glycerol degradation to butanol Alfi_1490 PWY-5057 L-valine degradation II Alfi_1490 PWY-5076 L-leucine degradation III Alfi_1490 PWY-5078 L-isoleucine degradation II Alfi_1490 PWY-5101 L-isoleucine biosynthesis II Alfi_1490 PWY-5103 L-isoleucine biosynthesis III Alfi_1490 PWY-5104 L-isoleucine biosynthesis IV Alfi_1490 PWY-5108 L-isoleucine biosynthesis V Alfi_1493 PWY-5316 nicotine biosynthesis Alfi_1493 PWY-7342 superpathway of nicotine biosynthesis Alfi_1504 PWY-5663 tetrahydrobiopterin biosynthesis I Alfi_1504 PWY-5664 tetrahydrobiopterin biosynthesis II Alfi_1504 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Alfi_1504 PWY-6703 preQ0 biosynthesis Alfi_1504 PWY-6983 tetrahydrobiopterin biosynthesis III Alfi_1504 PWY-7442 drosopterin and aurodrosopterin biosynthesis Alfi_1505 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Alfi_1510 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Alfi_1510 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Alfi_1511 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Alfi_1511 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Alfi_1511 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Alfi_1529 PWY-6527 stachyose degradation Alfi_1536 PWY-5971 palmitate biosynthesis II (bacteria and plants) Alfi_1536 PWY-5973 cis-vaccenate biosynthesis Alfi_1536 PWY-5989 stearate biosynthesis II (bacteria and plants) Alfi_1536 PWY-5994 palmitate biosynthesis I (animals and fungi) Alfi_1536 PWY-6113 superpathway of mycolate biosynthesis Alfi_1536 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Alfi_1536 PWY-6519 8-amino-7-oxononanoate biosynthesis I Alfi_1536 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Alfi_1536 PWYG-321 mycolate biosynthesis Alfi_1558 PWY-6902 chitin degradation II Alfi_1560 PWY-6902 chitin degradation II Alfi_1618 PWY-6829 tRNA methylation (yeast) Alfi_1618 PWY-7285 methylwyosine biosynthesis Alfi_1618 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Alfi_1636 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Alfi_1636 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Alfi_1636 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Alfi_1636 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Alfi_1637 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Alfi_1637 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Alfi_1642 PWY-6012 acyl carrier protein metabolism I Alfi_1642 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Alfi_1648 PWY-622 starch biosynthesis Alfi_1649 PWY-6700 queuosine biosynthesis Alfi_1658 PWY-5381 pyridine nucleotide cycling (plants) Alfi_1658 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Alfi_1658 PWY-6596 adenosine nucleotides degradation I Alfi_1658 PWY-6606 guanosine nucleotides degradation II Alfi_1658 PWY-6607 guanosine nucleotides degradation I Alfi_1658 PWY-6608 guanosine nucleotides degradation III Alfi_1658 PWY-7185 UTP and CTP dephosphorylation I Alfi_1676 PWY-7456 mannan degradation Alfi_1677 PWY-4983 L-citrulline-nitric oxide cycle Alfi_1677 PWY-4984 urea cycle Alfi_1677 PWY-5 canavanine biosynthesis Alfi_1677 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Alfi_1677 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Alfi_1679 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Alfi_1679 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Alfi_1680 PWY-5686 UMP biosynthesis Alfi_1682 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Alfi_1682 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Alfi_1683 PWY-4983 L-citrulline-nitric oxide cycle Alfi_1683 PWY-4984 urea cycle Alfi_1683 PWY-5 canavanine biosynthesis Alfi_1683 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Alfi_1683 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Alfi_1746 PWY-1042 glycolysis IV (plant cytosol) Alfi_1746 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_1746 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Alfi_1746 PWY-7003 glycerol degradation to butanol Alfi_1754 PWY-5839 menaquinol-7 biosynthesis Alfi_1754 PWY-5844 menaquinol-9 biosynthesis Alfi_1754 PWY-5849 menaquinol-6 biosynthesis Alfi_1754 PWY-5890 menaquinol-10 biosynthesis Alfi_1754 PWY-5891 menaquinol-11 biosynthesis Alfi_1754 PWY-5892 menaquinol-12 biosynthesis Alfi_1754 PWY-5895 menaquinol-13 biosynthesis Alfi_1768 PWY-842 starch degradation I Alfi_1778 PWY-842 starch degradation I Alfi_1849 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_1851 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_1853 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_1854 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_1942 PWY-5941 glycogen degradation II (eukaryotic) Alfi_1942 PWY-6724 starch degradation II Alfi_1942 PWY-6737 starch degradation V Alfi_1942 PWY-7238 sucrose biosynthesis II Alfi_1957 PWY-2941 L-lysine biosynthesis II Alfi_1957 PWY-5097 L-lysine biosynthesis VI Alfi_1965 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Alfi_1965 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Alfi_1965 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Alfi_1977 PWY-3801 sucrose degradation II (sucrose synthase) Alfi_1977 PWY-5054 sorbitol biosynthesis I Alfi_1977 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Alfi_1977 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Alfi_1977 PWY-5659 GDP-mannose biosynthesis Alfi_1977 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Alfi_1977 PWY-621 sucrose degradation III (sucrose invertase) Alfi_1977 PWY-622 starch biosynthesis Alfi_1977 PWY-6531 mannitol cycle Alfi_1977 PWY-6981 chitin biosynthesis Alfi_1977 PWY-7238 sucrose biosynthesis II Alfi_1977 PWY-7347 sucrose biosynthesis III Alfi_1977 PWY-7385 1,3-propanediol biosynthesis (engineered) Alfi_1978 PWY-5667 CDP-diacylglycerol biosynthesis I Alfi_1978 PWY-5981 CDP-diacylglycerol biosynthesis III Alfi_2025 PWY-5686 UMP biosynthesis Alfi_2059 PWY-5971 palmitate biosynthesis II (bacteria and plants) Alfi_2059 PWY-5973 cis-vaccenate biosynthesis Alfi_2059 PWY-5989 stearate biosynthesis II (bacteria and plants) Alfi_2059 PWY-6113 superpathway of mycolate biosynthesis Alfi_2059 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Alfi_2059 PWY-6519 8-amino-7-oxononanoate biosynthesis I Alfi_2059 PWY-7096 triclosan resistance Alfi_2059 PWYG-321 mycolate biosynthesis Alfi_2085 PWY-3841 folate transformations II Alfi_2085 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Alfi_2085 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Alfi_2085 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Alfi_2085 PWY-7199 pyrimidine deoxyribonucleosides salvage Alfi_2085 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Alfi_2098 PWY-3841 folate transformations II Alfi_2098 PWY-6614 tetrahydrofolate biosynthesis Alfi_2104 PWY-6936 seleno-amino acid biosynthesis Alfi_2224 PWY-1042 glycolysis IV (plant cytosol) Alfi_2224 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Alfi_2224 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_2224 PWY-7385 1,3-propanediol biosynthesis (engineered) Alfi_2236 PWY-3781 aerobic respiration I (cytochrome c) Alfi_2236 PWY-4302 aerobic respiration III (alternative oxidase pathway) Alfi_2236 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Alfi_2236 PWY-5690 TCA cycle II (plants and fungi) Alfi_2236 PWY-6728 methylaspartate cycle Alfi_2236 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Alfi_2236 PWY-7254 TCA cycle VII (acetate-producers) Alfi_2236 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Alfi_2237 PWY-3781 aerobic respiration I (cytochrome c) Alfi_2237 PWY-4302 aerobic respiration III (alternative oxidase pathway) Alfi_2237 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Alfi_2237 PWY-5690 TCA cycle II (plants and fungi) Alfi_2237 PWY-6728 methylaspartate cycle Alfi_2237 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Alfi_2237 PWY-7254 TCA cycle VII (acetate-producers) Alfi_2237 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Alfi_2249 PWY-6482 diphthamide biosynthesis (archaea) Alfi_2249 PWY-7546 diphthamide biosynthesis (eukaryotes) Alfi_2253 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Alfi_2253 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Alfi_2253 PWY-6268 adenosylcobalamin salvage from cobalamin Alfi_2253 PWY-6269 adenosylcobalamin salvage from cobinamide II Alfi_2307 PWY-5686 UMP biosynthesis Alfi_2308 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Alfi_2308 PWY-5686 UMP biosynthesis Alfi_2308 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Alfi_2309 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Alfi_2309 PWY-5686 UMP biosynthesis Alfi_2309 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Alfi_2312 PWY-5686 UMP biosynthesis Alfi_2314 PWY-5686 UMP biosynthesis Alfi_2315 PWY-5686 UMP biosynthesis Alfi_2319 PWY-6902 chitin degradation II Alfi_2322 PWY-6123 inosine-5'-phosphate biosynthesis I Alfi_2322 PWY-7234 inosine-5'-phosphate biosynthesis III Alfi_2326 PWY-6123 inosine-5'-phosphate biosynthesis I Alfi_2326 PWY-6124 inosine-5'-phosphate biosynthesis II Alfi_2326 PWY-7234 inosine-5'-phosphate biosynthesis III Alfi_2327 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Alfi_2327 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Alfi_2327 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Alfi_2327 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Alfi_2328 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Alfi_2328 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Alfi_2328 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Alfi_2329 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Alfi_2329 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Alfi_2330 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Alfi_2330 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Alfi_2331 PWY-6123 inosine-5'-phosphate biosynthesis I Alfi_2331 PWY-6124 inosine-5'-phosphate biosynthesis II Alfi_2331 PWY-7234 inosine-5'-phosphate biosynthesis III Alfi_2332 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Alfi_2332 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Alfi_2332 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Alfi_2333 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Alfi_2333 PWY-2201 folate transformations I Alfi_2333 PWY-3841 folate transformations II Alfi_2333 PWY-5030 L-histidine degradation III Alfi_2333 PWY-5497 purine nucleobases degradation II (anaerobic) Alfi_2333 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Alfi_2337 PWY-5316 nicotine biosynthesis Alfi_2337 PWY-5381 pyridine nucleotide cycling (plants) Alfi_2337 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Alfi_2337 PWY-7342 superpathway of nicotine biosynthesis Alfi_2342 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_2348 PWY-5381 pyridine nucleotide cycling (plants) Alfi_2348 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Alfi_2354 PWY-5941 glycogen degradation II (eukaryotic) Alfi_2354 PWY-6724 starch degradation II Alfi_2354 PWY-6737 starch degradation V Alfi_2354 PWY-7238 sucrose biosynthesis II Alfi_2356 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Alfi_2356 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Alfi_2382 PWY-3961 phosphopantothenate biosynthesis II Alfi_2389 PWY-5743 3-hydroxypropanoate cycle Alfi_2389 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Alfi_2389 PWY-6728 methylaspartate cycle Alfi_2389 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Alfi_2390 PWY-5743 3-hydroxypropanoate cycle Alfi_2390 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Alfi_2390 PWY-6728 methylaspartate cycle Alfi_2390 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Alfi_2391 PWY-381 nitrate reduction II (assimilatory) Alfi_2391 PWY-5675 nitrate reduction V (assimilatory) Alfi_2391 PWY-6549 L-glutamine biosynthesis III Alfi_2391 PWY-6963 ammonia assimilation cycle I Alfi_2391 PWY-6964 ammonia assimilation cycle II Alfi_2421 PWY-5667 CDP-diacylglycerol biosynthesis I Alfi_2421 PWY-5981 CDP-diacylglycerol biosynthesis III Alfi_2423 PWY-6891 thiazole biosynthesis II (Bacillus) Alfi_2423 PWY-6892 thiazole biosynthesis I (E. coli) Alfi_2423 PWY-7560 methylerythritol phosphate pathway II Alfi_2459 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Alfi_2459 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Alfi_2460 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Alfi_2460 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Alfi_2471 PWY-5669 phosphatidylethanolamine biosynthesis I Alfi_2473 PWY-5041 S-adenosyl-L-methionine cycle II Alfi_2480 PWY-5155 β-alanine biosynthesis III Alfi_2487 PWY-7560 methylerythritol phosphate pathway II Alfi_2488 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Alfi_2488 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Alfi_2491 PWY-4202 arsenate detoxification I (glutaredoxin) Alfi_2491 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Alfi_2491 PWY-6608 guanosine nucleotides degradation III Alfi_2491 PWY-6609 adenine and adenosine salvage III Alfi_2491 PWY-6611 adenine and adenosine salvage V Alfi_2491 PWY-6620 guanine and guanosine salvage Alfi_2491 PWY-6627 salinosporamide A biosynthesis Alfi_2491 PWY-6644 fluoroacetate and fluorothreonine biosynthesis Alfi_2491 PWY-7179 purine deoxyribonucleosides degradation I Alfi_2491 PWY-7179-1 purine deoxyribonucleosides degradation Alfi_2494 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Alfi_2501 PWY-5491 diethylphosphate degradation Alfi_2503 PWY-7560 methylerythritol phosphate pathway II Alfi_2514 PWY-6164 3-dehydroquinate biosynthesis I Alfi_2523 PWY-6167 flavin biosynthesis II (archaea) Alfi_2523 PWY-6168 flavin biosynthesis III (fungi) Alfi_2523 PWY-7219 adenosine ribonucleotides de novo biosynthesis Alfi_2542 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Alfi_2542 PWY-5723 Rubisco shunt Alfi_2549 PWY-4261 glycerol degradation I Alfi_2549 PWY-6118 glycerol-3-phosphate shuttle Alfi_2549 PWY-6952 glycerophosphodiester degradation Alfi_2554 PWY-3821 galactose degradation III Alfi_2554 PWY-6317 galactose degradation I (Leloir pathway) Alfi_2554 PWY-6527 stachyose degradation Alfi_2558 PWY-4381 fatty acid biosynthesis initiation I Alfi_2558 PWY-6799 fatty acid biosynthesis (plant mitochondria) Alfi_2558 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Alfi_2561 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Alfi_2561 PWY-6855 chitin degradation I (archaea) Alfi_2561 PWY-6906 chitin derivatives degradation Alfi_2562 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Alfi_2562 PWY-6855 chitin degradation I (archaea) Alfi_2562 PWY-6906 chitin derivatives degradation Alfi_2563 PWY-6784 cellulose and hemicellulose degradation (cellulolosome) Alfi_2565 PWY-3861 mannitol degradation II Alfi_2565 PWY-3881 mannitol biosynthesis Alfi_2565 PWY-5659 GDP-mannose biosynthesis Alfi_2565 PWY-7456 mannan degradation Alfi_2565 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Alfi_2629 PWY-6807 xyloglucan degradation II (exoglucanase) Alfi_2655 PWY-4261 glycerol degradation I Alfi_2657 PWY-2723 trehalose degradation V Alfi_2657 PWY-6317 galactose degradation I (Leloir pathway) Alfi_2657 PWY-6737 starch degradation V Alfi_2658 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Alfi_2664 PWY-5491 diethylphosphate degradation Alfi_2668 PWY-6902 chitin degradation II Alfi_2675 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Alfi_2678 PWY-6654 phosphopantothenate biosynthesis III Alfi_2679 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Alfi_2679 PWY-6596 adenosine nucleotides degradation I Alfi_2679 PWY-7221 guanosine ribonucleotides de novo biosynthesis Alfi_2681 PWY-7221 guanosine ribonucleotides de novo biosynthesis Alfi_2730 PWY-6823 molybdenum cofactor biosynthesis Alfi_2730 PWY-6891 thiazole biosynthesis II (Bacillus) Alfi_2730 PWY-6892 thiazole biosynthesis I (E. coli) Alfi_2730 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Alfi_2731 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Alfi_2731 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Alfi_2731 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Alfi_2731 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Alfi_2731 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Alfi_2731 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Alfi_2778 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Alfi_2778 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Alfi_2778 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Alfi_2778 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Alfi_2778 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Alfi_2778 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Alfi_2778 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Alfi_2778 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Alfi_2784 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Alfi_2784 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Alfi_2784 PWY-6268 adenosylcobalamin salvage from cobalamin Alfi_2784 PWY-6269 adenosylcobalamin salvage from cobinamide II Alfi_2797 PWY-7560 methylerythritol phosphate pathway II Alfi_2852 PWY-6614 tetrahydrofolate biosynthesis Alfi_2864 PWY-7560 methylerythritol phosphate pathway II Alfi_2876 PWY-5667 CDP-diacylglycerol biosynthesis I Alfi_2876 PWY-5981 CDP-diacylglycerol biosynthesis III Alfi_2876 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) Alfi_2876 PWY-7417 phospholipid remodeling (phosphatidate, yeast) Alfi_2879 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Alfi_2880 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Alfi_2880 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Alfi_2891 PWY-2941 L-lysine biosynthesis II Alfi_2891 PWY-2942 L-lysine biosynthesis III Alfi_2891 PWY-5097 L-lysine biosynthesis VI Alfi_2895 PWY-7219 adenosine ribonucleotides de novo biosynthesis Alfi_2910 PWY-1042 glycolysis IV (plant cytosol) Alfi_2910 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Alfi_2910 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_2910 PWY-6531 mannitol cycle Alfi_2910 PWY-7385 1,3-propanediol biosynthesis (engineered) Alfi_2922 PWY-6032 cardenolide biosynthesis Alfi_2922 PWY-7455 allopregnanolone biosynthesis Alfi_2924 PWY-4321 L-glutamate degradation IV Alfi_2933 PWY-5743 3-hydroxypropanoate cycle Alfi_2933 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Alfi_2933 PWY-6728 methylaspartate cycle Alfi_2933 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Alfi_2934 PWY-4381 fatty acid biosynthesis initiation I Alfi_2934 PWY-5743 3-hydroxypropanoate cycle Alfi_2934 PWY-5744 glyoxylate assimilation Alfi_2934 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Alfi_2934 PWY-6679 jadomycin biosynthesis Alfi_2934 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Alfi_2937 PWY-6339 syringate degradation Alfi_2953 PWY-1042 glycolysis IV (plant cytosol) Alfi_2953 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Alfi_2953 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_2953 PWY-5723 Rubisco shunt Alfi_2953 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Alfi_2953 PWY-6886 1-butanol autotrophic biosynthesis Alfi_2953 PWY-6901 superpathway of glucose and xylose degradation Alfi_2953 PWY-7003 glycerol degradation to butanol Alfi_2953 PWY-7124 ethylene biosynthesis V (engineered) Alfi_2953 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Alfi_3006 PWY-3221 dTDP-L-rhamnose biosynthesis II Alfi_3006 PWY-6808 dTDP-D-forosamine biosynthesis Alfi_3006 PWY-6942 dTDP-D-desosamine biosynthesis Alfi_3006 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Alfi_3006 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Alfi_3006 PWY-6974 dTDP-L-olivose biosynthesis Alfi_3006 PWY-6976 dTDP-L-mycarose biosynthesis Alfi_3006 PWY-7104 dTDP-L-megosamine biosynthesis Alfi_3006 PWY-7301 dTDP-β-L-noviose biosynthesis Alfi_3006 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Alfi_3006 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Alfi_3006 PWY-7316 dTDP-N-acetylviosamine biosynthesis Alfi_3006 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Alfi_3006 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Alfi_3006 PWY-7414 dTDP-α-D-mycaminose biosynthesis Alfi_3006 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Alfi_3009 PWY-3221 dTDP-L-rhamnose biosynthesis II Alfi_3009 PWY-6808 dTDP-D-forosamine biosynthesis Alfi_3009 PWY-6942 dTDP-D-desosamine biosynthesis Alfi_3009 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Alfi_3009 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Alfi_3009 PWY-6974 dTDP-L-olivose biosynthesis Alfi_3009 PWY-6976 dTDP-L-mycarose biosynthesis Alfi_3009 PWY-7104 dTDP-L-megosamine biosynthesis Alfi_3009 PWY-7301 dTDP-β-L-noviose biosynthesis Alfi_3009 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Alfi_3009 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Alfi_3009 PWY-7316 dTDP-N-acetylviosamine biosynthesis Alfi_3009 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Alfi_3009 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Alfi_3009 PWY-7414 dTDP-α-D-mycaminose biosynthesis Alfi_3009 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Alfi_3010 PWY-6655 xanthan biosynthesis Alfi_3010 PWY-6658 acetan biosynthesis Alfi_3016 PWY-6562 norspermidine biosynthesis Alfi_3017 PWY-6643 coenzyme M biosynthesis II Alfi_3019 PWY-5030 L-histidine degradation III Alfi_3019 PWY-5497 purine nucleobases degradation II (anaerobic) Alfi_3020 PWY-5028 L-histidine degradation II Alfi_3020 PWY-5030 L-histidine degradation III Alfi_3021 PWY-5028 L-histidine degradation II Alfi_3021 PWY-5030 L-histidine degradation III Alfi_3022 PWY-5028 L-histidine degradation II Alfi_3022 PWY-5030 L-histidine degradation III Alfi_3028 PWY-6936 seleno-amino acid biosynthesis Alfi_3029 PWY-5331 taurine biosynthesis Alfi_3038 PWY-7193 pyrimidine ribonucleosides salvage I Alfi_3068 PWY-5367 petroselinate biosynthesis Alfi_3068 PWY-5971 palmitate biosynthesis II (bacteria and plants) Alfi_3068 PWY-5973 cis-vaccenate biosynthesis Alfi_3068 PWY-5989 stearate biosynthesis II (bacteria and plants) Alfi_3068 PWY-5994 palmitate biosynthesis I (animals and fungi) Alfi_3068 PWY-6113 superpathway of mycolate biosynthesis Alfi_3068 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Alfi_3068 PWY-6519 8-amino-7-oxononanoate biosynthesis I Alfi_3068 PWY-6951 Alfi_3068|Alfi_3068|YP_006411994.1|GeneID:13054330 Alfi_3068 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Alfi_3068 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Alfi_3068 PWYG-321 mycolate biosynthesis Alfi_3069 PWY-1622 formaldehyde assimilation I (serine pathway) Alfi_3069 PWY-181 photorespiration Alfi_3069 PWY-2161 folate polyglutamylation Alfi_3069 PWY-2201 folate transformations I Alfi_3069 PWY-3661 glycine betaine degradation I Alfi_3069 PWY-3661-1 glycine betaine degradation II (mammalian) Alfi_3069 PWY-3841 folate transformations II Alfi_3069 PWY-5497 purine nucleobases degradation II (anaerobic) Alfi_3072 PWY-7310 D-glucosaminate degradation Alfi_3092 PWY-6749 CMP-legionaminate biosynthesis I Alfi_3094 PWY-2301 myo-inositol biosynthesis Alfi_3094 PWY-4702 phytate degradation I Alfi_3094 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation Alfi_3097 PWY-6749 CMP-legionaminate biosynthesis I Alfi_3103 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Alfi_3103 PWY-6167 flavin biosynthesis II (archaea) Alfi_3103 PWY-6168 flavin biosynthesis III (fungi) Alfi_3147 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Alfi_3171 PWY-6902 chitin degradation II Alfi_3178 PWY-2941 L-lysine biosynthesis II Alfi_3178 PWY-2942 L-lysine biosynthesis III Alfi_3178 PWY-5097 L-lysine biosynthesis VI Alfi_3192 PWY-7219 adenosine ribonucleotides de novo biosynthesis Alfi_3218 PWY-2781 cis-zeatin biosynthesis Alfi_3220 PWY-282 cuticular wax biosynthesis Alfi_3239 PWY-1622 formaldehyde assimilation I (serine pathway) Alfi_3239 PWY-5484 glycolysis II (from fructose 6-phosphate) Alfi_3249 PWY-5344 L-homocysteine biosynthesis Alfi_3249 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Alfi_3250 PWY-5344 L-homocysteine biosynthesis Alfi_3265 PWY-6167 flavin biosynthesis II (archaea) Alfi_3265 PWY-6168 flavin biosynthesis III (fungi) Alfi_3265 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Alfi_3277 PWY-7221 guanosine ribonucleotides de novo biosynthesis Alfi_3278 PWY-5381 pyridine nucleotide cycling (plants) Alfi_3278 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Alfi_3279 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Alfi_3279 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Alfi_3287 PWY-3341 L-proline biosynthesis III Alfi_3287 PWY-4981 L-proline biosynthesis II (from arginine) Alfi_3287 PWY-6344 L-ornithine degradation II (Stickland reaction) Alfi_3288 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Alfi_3291 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Alfi_3291 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Alfi_3294 PWY-5392 reductive TCA cycle II Alfi_3294 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Alfi_3294 PWY-5690 TCA cycle II (plants and fungi) Alfi_3294 PWY-5913 TCA cycle VI (obligate autotrophs) Alfi_3294 PWY-6728 methylaspartate cycle Alfi_3294 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Alfi_3294 PWY-7254 TCA cycle VII (acetate-producers) Alfi_3294 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Alfi_3295 PWY-2941 L-lysine biosynthesis II Alfi_3295 PWY-2942 L-lysine biosynthesis III Alfi_3295 PWY-5097 L-lysine biosynthesis VI Alfi_3304 PWY-6749 CMP-legionaminate biosynthesis I