Alfi_0001	SSF48295	TrpR-like
Alfi_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0003	SSF46785	"Winged helix" DNA-binding domain
Alfi_0004	SSF51182	RmlC-like cupins
Alfi_0006	SSF52833	Thioredoxin-like
Alfi_0008	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0008	SSF54752	RecA protein, C-terminal domain
Alfi_0009	SSF109604	HD-domain/PDEase-like
Alfi_0009	SSF55021	ACT-like
Alfi_0009	SSF81271	TGS-like
Alfi_0009	SSF81301	Nucleotidyltransferase
Alfi_0011	SSF54197	HIT-like
Alfi_0012	SSF47413	lambda repressor-like DNA-binding domains
Alfi_0013	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_0015	SSF53807	"Helical backbone" metal receptor
Alfi_0016	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0019	SSF46689	Homeodomain-like
Alfi_0019	SSF48295	TrpR-like
Alfi_0020	SSF53098	Ribonuclease H-like
Alfi_0021	SSF54913	GlnB-like
Alfi_0022	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Alfi_0022	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Alfi_0022	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_0023	SSF111369	HlyD-like secretion proteins
Alfi_0024	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_0025	SSF46689	Homeodomain-like
Alfi_0025	SSF48498	Tetracyclin repressor-like, C-terminal domain
Alfi_0027	SSF103473	MFS general substrate transporter
Alfi_0028	SSF51011	Glycosyl hydrolase domain
Alfi_0028	SSF51445	(Trans)glycosidases
Alfi_0028	SSF81296	E set domains
Alfi_0029	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0029	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_0030	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_0031	SSF51338	Composite domain of metallo-dependent hydrolases
Alfi_0031	SSF51556	Metallo-dependent hydrolases
Alfi_0033	SSF74653	TolA/TonB C-terminal domain
Alfi_0037	SSF53067	Actin-like ATPase domain
Alfi_0040	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Alfi_0041	SSF103515	Autotransporter
Alfi_0045	SSF47413	lambda repressor-like DNA-binding domains
Alfi_0045	SSF51306	LexA/Signal peptidase
Alfi_0047	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_0047	SSF52922	TK C-terminal domain-like
Alfi_0047	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Alfi_0048	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_0049	SSF52833	Thioredoxin-like
Alfi_0052	SSF51445	(Trans)glycosidases
Alfi_0052	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_0052	SSF56988	Anthrax protective antigen
Alfi_0053	SSF53649	Alkaline phosphatase-like
Alfi_0054	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_0055	SSF51445	(Trans)glycosidases
Alfi_0056	SSF48452	TPR-like
Alfi_0057	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0057	SSF56935	Porins
Alfi_0059	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0059	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0060	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0060	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0062	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0062	SSF56935	Porins
Alfi_0063	SSF48452	TPR-like
Alfi_0064	SSF51445	(Trans)glycosidases
Alfi_0065	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_0067	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0067	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0069	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0069	SSF56935	Porins
Alfi_0070	SSF48452	TPR-like
Alfi_0071	SSF51445	(Trans)glycosidases
Alfi_0072	SSF49785	Galactose-binding domain-like
Alfi_0073	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_0075	SSF48208	Six-hairpin glycosidases
Alfi_0076	SSF51445	(Trans)glycosidases
Alfi_0076	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Alfi_0077	SSF51445	(Trans)glycosidases
Alfi_0077	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_0077	SSF56988	Anthrax protective antigen
Alfi_0079	SSF116726	TrkA C-terminal domain-like
Alfi_0082	SSF74653	TolA/TonB C-terminal domain
Alfi_0083	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_0083	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_0084	SSF51161	Trimeric LpxA-like enzymes
Alfi_0085	SSF75420	YhbC-like, N-terminal domain
Alfi_0086	SSF50249	Nucleic acid-binding proteins
Alfi_0086	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Alfi_0086	SSF69705	Transcription factor NusA, N-terminal domain
Alfi_0087	SSF50447	Translation proteins
Alfi_0087	SSF52156	Initiation factor IF2/eIF5b, domain 3
Alfi_0087	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0089	SSF100950	NagB/RpiA/CoA transferase-like
Alfi_0090	SSF53649	Alkaline phosphatase-like
Alfi_0091	SSF56925	OMPA-like
Alfi_0096	SSF54001	Cysteine proteinases
Alfi_0098	SSF143034	L35p-like
Alfi_0099	SSF74731	Ribosomal protein L20
Alfi_0100	SSF55486	Metalloproteases ("zincins"), catalytic domain
Alfi_0102	SSF103473	MFS general substrate transporter
Alfi_0104	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_0105	SSF55008	HMA, heavy metal-associated domain
Alfi_0106	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0106	SSF56935	Porins
Alfi_0109	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0110	SSF53098	Ribonuclease H-like
Alfi_0111	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0111	SSF88697	PUA domain-like
Alfi_0112	SSF46785	"Winged helix" DNA-binding domain
Alfi_0113	SSF63825	YWTD domain
Alfi_0115	SSF52317	Class I glutamine amidotransferase-like
Alfi_0115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0117	SSF52172	CheY-like
Alfi_0118	SSF53633	Carbamate kinase-like
Alfi_0118	SSF88697	PUA domain-like
Alfi_0119	SSF53720	ALDH-like
Alfi_0121	SSF53067	Actin-like ATPase domain
Alfi_0122	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Alfi_0123	SSF53067	Actin-like ATPase domain
Alfi_0125	SSF50800	PK beta-barrel domain-like
Alfi_0125	SSF51621	Phosphoenolpyruvate/pyruvate domain
Alfi_0125	SSF52935	PK C-terminal domain-like
Alfi_0126	SSF52304	Type II 3-dehydroquinate dehydratase
Alfi_0127	SSF55326	PurM N-terminal domain-like
Alfi_0127	SSF56042	PurM C-terminal domain-like
Alfi_0129	SSF102114	Radical SAM enzymes
Alfi_0130	SSF53271	PRTase-like
Alfi_0136	SSF142019	Nqo1 FMN-binding domain-like
Alfi_0136	SSF46548	alpha-helical ferredoxin
Alfi_0137	SSF54862	4Fe-4S ferredoxins
Alfi_0139	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_0139	SSF56317	Carbon-nitrogen hydrolase
Alfi_0140	SSF51182	RmlC-like cupins
Alfi_0142	SSF102705	NIF3 (NGG1p interacting factor 3)-like
Alfi_0143	SSF46955	Putative DNA-binding domain
Alfi_0144	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0147	SSF116726	TrkA C-terminal domain-like
Alfi_0147	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0150	SSF56655	Carbohydrate phosphatase
Alfi_0153	SSF52172	CheY-like
Alfi_0154	SSF141091	L21p-like
Alfi_0155	SSF110324	Ribosomal L27 protein-like
Alfi_0159	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_0159	SSF52922	TK C-terminal domain-like
Alfi_0159	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Alfi_0159	SSF54862	4Fe-4S ferredoxins
Alfi_0161	SSF63411	LuxS/MPP-like metallohydrolase
Alfi_0162	SSF63411	LuxS/MPP-like metallohydrolase
Alfi_0163	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0167	SSF46785	"Winged helix" DNA-binding domain
Alfi_0167	SSF47819	HRDC-like
Alfi_0167	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0168	SSF56935	Porins
Alfi_0169	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0170	SSF55205	EPT/RTPC-like
Alfi_0171	SSF103263	Chorismate synthase, AroC
Alfi_0172	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0174	SSF51261	Duplicated hybrid motif
Alfi_0175	SSF52172	CheY-like
Alfi_0176	SSF56349	DNA breaking-rejoining enzymes
Alfi_0183	SSF50249	Nucleic acid-binding proteins
Alfi_0185	SSF143120	YefM-like
Alfi_0186	SSF143011	RelE-like
Alfi_0194	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0195	SSF46689	Homeodomain-like
Alfi_0195	SSF48295	TrpR-like
Alfi_0196	SSF53098	Ribonuclease H-like
Alfi_0202	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0228	SSF48452	TPR-like
Alfi_0231	SSF51261	Duplicated hybrid motif
Alfi_0234	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0235	SSF46785	"Winged helix" DNA-binding domain
Alfi_0237	SSF54565	Ribosomal protein S16
Alfi_0238	SSF50346	PRC-barrel domain
Alfi_0239	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_0240	SSF142906	YjbR-like
Alfi_0241	SSF47413	lambda repressor-like DNA-binding domains
Alfi_0243	SSF51621	Phosphoenolpyruvate/pyruvate domain
Alfi_0243	SSF52009	Phosphohistidine domain
Alfi_0243	SSF56059	Glutathione synthetase ATP-binding domain-like
Alfi_0244	SSF56925	OMPA-like
Alfi_0245	SSF56925	OMPA-like
Alfi_0246	SSF53098	Ribonuclease H-like
Alfi_0248	SSF56420	Peptide deformylase
Alfi_0249	SSF53098	Ribonuclease H-like
Alfi_0250	SSF52954	Class II aaRS ABD-related
Alfi_0250	SSF55681	Class II aaRS and biotin synthetases
Alfi_0253	SSF54768	dsRNA-binding domain-like
Alfi_0253	SSF69065	RNase III domain-like
Alfi_0254	SSF53901	Thiolase-like
Alfi_0255	SSF47336	ACP-like
Alfi_0256	SSF52317	Class I glutamine amidotransferase-like
Alfi_0257	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_0257	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0258	SSF52980	Restriction endonuclease-like
Alfi_0259	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_0260	SSF53254	Phosphoglycerate mutase-like
Alfi_0262	SSF55811	Nudix
Alfi_0264	SSF55469	FMN-dependent nitroreductase-like
Alfi_0265	SSF52218	Flavoproteins
Alfi_0265	SSF54862	4Fe-4S ferredoxins
Alfi_0266	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_0267	SSF54001	Cysteine proteinases
Alfi_0268	SSF110395	CutC-like
Alfi_0269	SSF49764	HSP20-like chaperones
Alfi_0270	SSF51206	cAMP-binding domain-like
Alfi_0272	SSF56420	Peptide deformylase
Alfi_0273	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_0277	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Alfi_0279	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0280	SSF51206	cAMP-binding domain-like
Alfi_0289	SSF48439	Protein prenylyltransferase
Alfi_0289	SSF48452	TPR-like
Alfi_0289	SSF50630	Acid proteases
Alfi_0292	SSF48452	TPR-like
Alfi_0293	SSF48452	TPR-like
Alfi_0293	SSF50494	Trypsin-like serine proteases
Alfi_0295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0298	SSF56349	DNA breaking-rejoining enzymes
Alfi_0301	SSF48452	TPR-like
Alfi_0302	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0302	SSF56935	Porins
Alfi_0304	SSF52743	Subtilisin-like
Alfi_0306	SSF48452	TPR-like
Alfi_0307	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0307	SSF56935	Porins
Alfi_0308	SSF56349	DNA breaking-rejoining enzymes
Alfi_0309	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0309	SSF56935	Porins
Alfi_0310	SSF48452	TPR-like
Alfi_0311	SSF55486	Metalloproteases ("zincins"), catalytic domain
Alfi_0315	SSF52218	Flavoproteins
Alfi_0315	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_0316	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_0316	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0316	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Alfi_0317	SSF51197	Clavaminate synthase-like
Alfi_0318	SSF56219	DNase I-like
Alfi_0319	SSF144091	Rhomboid-like
Alfi_0320	SSF118116	DNA mismatch repair protein MutL
Alfi_0320	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_0320	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_0322	SSF46565	Chaperone J-domain
Alfi_0322	SSF49493	HSP40/DnaJ peptide-binding domain
Alfi_0322	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Alfi_0323	SSF51064	Head domain of nucleotide exchange factor GrpE
Alfi_0323	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
Alfi_0324	SSF53790	Tetrapyrrole methylase
Alfi_0326	SSF50621	Alanine racemase C-terminal domain-like
Alfi_0326	SSF51419	PLP-binding barrel
Alfi_0326	SSF53244	MurD-like peptide ligases, peptide-binding domain
Alfi_0326	SSF53623	MurD-like peptide ligases, catalytic domain
Alfi_0326	SSF63418	MurE/MurF N-terminal domain
Alfi_0327	SSF160443	SMR domain-like
Alfi_0327	SSF48334	DNA repair protein MutS, domain III
Alfi_0327	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0329	SSF53187	Zn-dependent exopeptidases
Alfi_0331	SSF54862	4Fe-4S ferredoxins
Alfi_0331	SSF55469	FMN-dependent nitroreductase-like
Alfi_0332	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_0333	SSF103473	MFS general substrate transporter
Alfi_0336	SSF55486	Metalloproteases ("zincins"), catalytic domain
Alfi_0337	SSF55486	Metalloproteases ("zincins"), catalytic domain
Alfi_0338	SSF75217	alpha/beta knot
Alfi_0338	SSF88697	PUA domain-like
Alfi_0343	SSF143243	Nqo5-like
Alfi_0343	SSF56762	HydB/Nqo4-like
Alfi_0344	SSF54862	4Fe-4S ferredoxins
Alfi_0344	SSF56770	HydA/Nqo6-like
Alfi_0348	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0349	SSF49303	beta-Galactosidase/glucuronidase domain
Alfi_0349	SSF49785	Galactose-binding domain-like
Alfi_0349	SSF51445	(Trans)glycosidases
Alfi_0349	SSF74650	Galactose mutarotase-like
Alfi_0350	SSF51366	Ribulose-phoshate binding barrel
Alfi_0352	SSF46589	tRNA-binding arm
Alfi_0352	SSF55681	Class II aaRS and biotin synthetases
Alfi_0353	SSF54862	4Fe-4S ferredoxins
Alfi_0358	SSF75620	Release factor
Alfi_0359	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0361	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Alfi_0361	SSF52374	Nucleotidylyl transferase
Alfi_0362	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0363	SSF55166	Hedgehog/DD-peptidase
Alfi_0364	SSF49785	Galactose-binding domain-like
Alfi_0364	SSF51445	(Trans)glycosidases
Alfi_0371	SSF56801	Acetyl-CoA synthetase-like
Alfi_0372	SSF46548	alpha-helical ferredoxin
Alfi_0373	SSF48452	TPR-like
Alfi_0374	SSF53927	Cytidine deaminase-like
Alfi_0375	SSF50249	Nucleic acid-binding proteins
Alfi_0375	SSF55261	GAD domain-like
Alfi_0375	SSF55681	Class II aaRS and biotin synthetases
Alfi_0377	SSF48019	post-AAA+ oligomerization domain-like
Alfi_0377	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0378	SSF56300	Metallo-dependent phosphatases
Alfi_0379	SSF56925	OMPA-like
Alfi_0382	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0383	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_0383	SSF48452	TPR-like
Alfi_0383	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_0387	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0388	SSF46785	"Winged helix" DNA-binding domain
Alfi_0390	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0390	SSF56935	Porins
Alfi_0390	SSF74653	TolA/TonB C-terminal domain
Alfi_0392	SSF52141	Uracil-DNA glycosylase-like
Alfi_0394	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0394	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0395	SSF50156	PDZ domain-like
Alfi_0395	SSF50494	Trypsin-like serine proteases
Alfi_0396	SSF55973	S-adenosylmethionine synthetase
Alfi_0400	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0400	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0401	SSF56349	DNA breaking-rejoining enzymes
Alfi_0407	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Alfi_0409	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_0409	SSF52922	TK C-terminal domain-like
Alfi_0410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0411	SSF52096	ClpP/crotonase
Alfi_0412	SSF102735	Trigger factor ribosome-binding domain
Alfi_0412	SSF109998	Triger factor/SurA peptide-binding domain-like
Alfi_0413	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
Alfi_0414	SSF47644	Methionine synthase domain
Alfi_0414	SSF51717	Dihydropteroate synthetase-like
Alfi_0414	SSF52242	Cobalamin (vitamin B12)-binding domain
Alfi_0414	SSF56507	Methionine synthase activation domain-like
Alfi_0414	SSF82282	Homocysteine S-methyltransferase
Alfi_0415	SSF51730	FAD-linked oxidoreductase
Alfi_0416	SSF53187	Zn-dependent exopeptidases
Alfi_0416	SSF55031	Bacterial exopeptidase dimerisation domain
Alfi_0417	SSF50249	Nucleic acid-binding proteins
Alfi_0418	SSF102114	Radical SAM enzymes
Alfi_0419	SSF51445	(Trans)glycosidases
Alfi_0420	SSF48208	Six-hairpin glycosidases
Alfi_0421	SSF48208	Six-hairpin glycosidases
Alfi_0422	SSF52266	SGNH hydrolase
Alfi_0423	SSF101898	NHL repeat
Alfi_0423	SSF46689	Homeodomain-like
Alfi_0423	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_0423	SSF52172	CheY-like
Alfi_0423	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_0423	SSF63829	Calcium-dependent phosphotriesterase
Alfi_0424	SSF48208	Six-hairpin glycosidases
Alfi_0427	SSF48452	TPR-like
Alfi_0428	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0428	SSF56935	Porins
Alfi_0429	SSF74650	Galactose mutarotase-like
Alfi_0429	SSF88688	Families 57/38 glycoside transferase middle domain
Alfi_0429	SSF88713	Glycoside hydrolase/deacetylase
Alfi_0430	SSF81333	F1F0 ATP synthase subunit C
Alfi_0433	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0434	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Alfi_0434	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0437	SSF46785	"Winged helix" DNA-binding domain
Alfi_0437	SSF53067	Actin-like ATPase domain
Alfi_0438	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_0439	SSF56176	FAD-binding/transporter-associated domain-like
Alfi_0439	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Alfi_0440	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_0440	SSF56037	PheT/TilS domain
Alfi_0441	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0442	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Alfi_0444	SSF52374	Nucleotidylyl transferase
Alfi_0445	SSF51161	Trimeric LpxA-like enzymes
Alfi_0446	SSF52833	Thioredoxin-like
Alfi_0447	SSF53098	Ribonuclease H-like
Alfi_0448	SSF52833	Thioredoxin-like
Alfi_0456	SSF47413	lambda repressor-like DNA-binding domains
Alfi_0457	SSF140931	Fic-like
Alfi_0462	SSF46955	Putative DNA-binding domain
Alfi_0469	SSF48024	N-terminal domain of DnaB helicase
Alfi_0469	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0474	SSF56349	DNA breaking-rejoining enzymes
Alfi_0475	SSF52833	Thioredoxin-like
Alfi_0476	SSF54862	4Fe-4S ferredoxins
Alfi_0477	SSF46785	"Winged helix" DNA-binding domain
Alfi_0478	SSF48452	TPR-like
Alfi_0479	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0479	SSF56935	Porins
Alfi_0485	SSF56349	DNA breaking-rejoining enzymes
Alfi_0486	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_0487	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Alfi_0488	SSF53383	PLP-dependent transferases
Alfi_0489	SSF100950	NagB/RpiA/CoA transferase-like
Alfi_0490	SSF56784	HAD-like
Alfi_0491	SSF50494	Trypsin-like serine proteases
Alfi_0492	SSF54862	4Fe-4S ferredoxins
Alfi_0496	SSF49452	Starch-binding domain-like
Alfi_0496	SSF56935	Porins
Alfi_0498	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0501	SSF111369	HlyD-like secretion proteins
Alfi_0502	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_0503	SSF116726	TrkA C-terminal domain-like
Alfi_0504	SSF50182	Sm-like ribonucleoproteins
Alfi_0505	SSF55811	Nudix
Alfi_0506	SSF103473	MFS general substrate transporter
Alfi_0508	SSF109998	Triger factor/SurA peptide-binding domain-like
Alfi_0508	SSF54534	FKBP-like
Alfi_0509	SSF109998	Triger factor/SurA peptide-binding domain-like
Alfi_0511	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0512	SSF110849	ParB/Sulfiredoxin
Alfi_0514	SSF53955	Lysozyme-like
Alfi_0514	SSF54106	LysM domain
Alfi_0515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0516	SSF56349	DNA breaking-rejoining enzymes
Alfi_0522	SSF46955	Putative DNA-binding domain
Alfi_0524	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0527	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_0532	SSF56672	DNA/RNA polymerases
Alfi_0539	SSF52980	Restriction endonuclease-like
Alfi_0542	SSF56349	DNA breaking-rejoining enzymes
Alfi_0544	SSF56349	DNA breaking-rejoining enzymes
Alfi_0546	SSF46955	Putative DNA-binding domain
Alfi_0548	SSF46955	Putative DNA-binding domain
Alfi_0549	SSF46955	Putative DNA-binding domain
Alfi_0551	SSF56712	Prokaryotic type I DNA topoisomerase
Alfi_0553	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0553	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0555	SSF50447	Translation proteins
Alfi_0555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0555	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_0555	SSF54980	EF-G C-terminal domain-like
Alfi_0556	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Alfi_0556	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_0556	SSF52172	CheY-like
Alfi_0556	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_0574	SSF56349	DNA breaking-rejoining enzymes
Alfi_0575	SSF116734	DNA methylase specificity domain
Alfi_0576	SSF116734	DNA methylase specificity domain
Alfi_0577	SSF116734	DNA methylase specificity domain
Alfi_0579	SSF116734	DNA methylase specificity domain
Alfi_0581	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0583	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0584	SSF47413	lambda repressor-like DNA-binding domains
Alfi_0586	SSF46785	"Winged helix" DNA-binding domain
Alfi_0586	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0587	SSF47413	lambda repressor-like DNA-binding domains
Alfi_0588	SSF103642	Sec-C motif
Alfi_0591	SSF111038	YjbQ-like
Alfi_0593	SSF48208	Six-hairpin glycosidases
Alfi_0595	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_0597	SSF47240	Ferritin-like
Alfi_0598	SSF160574	BT0923-like
Alfi_0599	SSF160574	BT0923-like
Alfi_0600	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_0600	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_0601	SSF52172	CheY-like
Alfi_0603	SSF53901	Thiolase-like
Alfi_0604	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Alfi_0605	SSF57829	Zn-binding ribosomal proteins
Alfi_0608	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0608	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_0609	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0612	SSF48557	L-aspartase-like
Alfi_0613	SSF49265	Fibronectin type III
Alfi_0615	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0615	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0617	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0617	SSF56935	Porins
Alfi_0618	SSF48452	TPR-like
Alfi_0621	SSF56219	DNase I-like
Alfi_0622	SSF56219	DNase I-like
Alfi_0623	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0623	SSF56935	Porins
Alfi_0626	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_0627	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Alfi_0627	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Alfi_0627	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_0628	SSF111369	HlyD-like secretion proteins
Alfi_0629	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0629	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0631	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0631	SSF56935	Porins
Alfi_0632	SSF48452	TPR-like
Alfi_0633	SSF49299	PKD domain
Alfi_0633	SSF51695	PLC-like phosphodiesterases
Alfi_0634	SSF49299	PKD domain
Alfi_0634	SSF50998	Quinoprotein alcohol dehydrogenase-like
Alfi_0635	SSF56219	DNase I-like
Alfi_0636	SSF51695	PLC-like phosphodiesterases
Alfi_0637	SSF56219	DNase I-like
Alfi_0638	SSF103473	MFS general substrate transporter
Alfi_0639	SSF56925	OMPA-like
Alfi_0646	SSF46689	Homeodomain-like
Alfi_0646	SSF48295	TrpR-like
Alfi_0648	SSF46785	"Winged helix" DNA-binding domain
Alfi_0649	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0652	SSF51261	Duplicated hybrid motif
Alfi_0655	SSF48452	TPR-like
Alfi_0666	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0667	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0668	SSF56349	DNA breaking-rejoining enzymes
Alfi_0670	SSF46955	Putative DNA-binding domain
Alfi_0679	SSF53098	Ribonuclease H-like
Alfi_0681	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0686	SSF56672	DNA/RNA polymerases
Alfi_0690	SSF56672	DNA/RNA polymerases
Alfi_0692	SSF56672	DNA/RNA polymerases
Alfi_0704	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0707	SSF47413	lambda repressor-like DNA-binding domains
Alfi_0709	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0710	SSF116734	DNA methylase specificity domain
Alfi_0711	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0715	SSF46955	Putative DNA-binding domain
Alfi_0719	SSF51569	Aldolase
Alfi_0720	SSF47729	IHF-like DNA-binding proteins
Alfi_0732	SSF109709	KorB DNA-binding domain-like
Alfi_0732	SSF110849	ParB/Sulfiredoxin
Alfi_0733	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0735	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0745	SSF46955	Putative DNA-binding domain
Alfi_0746	SSF46955	Putative DNA-binding domain
Alfi_0747	SSF56349	DNA breaking-rejoining enzymes
Alfi_0762	SSF69349	Phage fibre proteins
Alfi_0763	SSF69349	Phage fibre proteins
Alfi_0765	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Alfi_0771	SSF69279	Phage tail proteins
Alfi_0779	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Alfi_0793	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Alfi_0794	SSF161266	Gam-like
Alfi_0799	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0801	SSF53098	Ribonuclease H-like
Alfi_0807	SSF51306	LexA/Signal peptidase
Alfi_0811	SSF56925	OMPA-like
Alfi_0817	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0826	SSF53098	Ribonuclease H-like
Alfi_0827	SSF46689	Homeodomain-like
Alfi_0827	SSF48295	TrpR-like
Alfi_0829	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_0845	SSF56349	DNA breaking-rejoining enzymes
Alfi_0848	SSF52058	L domain-like
Alfi_0849	SSF52058	L domain-like
Alfi_0852	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0853	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0856	SSF56349	DNA breaking-rejoining enzymes
Alfi_0860	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Alfi_0860	SSF63380	Riboflavin synthase domain-like
Alfi_0861	SSF46548	alpha-helical ferredoxin
Alfi_0861	SSF51971	Nucleotide-binding domain
Alfi_0864	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_0868	SSF53474	alpha/beta-Hydrolases
Alfi_0868	SSF82171	DPP6 N-terminal domain-like
Alfi_0869	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Alfi_0869	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Alfi_0875	SSF54862	4Fe-4S ferredoxins
Alfi_0877	SSF143243	Nqo5-like
Alfi_0877	SSF56762	HydB/Nqo4-like
Alfi_0878	SSF56770	HydA/Nqo6-like
Alfi_0881	SSF49785	Galactose-binding domain-like
Alfi_0882	SSF51445	(Trans)glycosidases
Alfi_0883	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_0885	SSF48452	TPR-like
Alfi_0886	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0886	SSF56935	Porins
Alfi_0888	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0888	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0889	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Alfi_0889	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Alfi_0890	SSF57802	Rubredoxin-like
Alfi_0891	SSF53383	PLP-dependent transferases
Alfi_0892	SSF51569	Aldolase
Alfi_0894	SSF51445	(Trans)glycosidases
Alfi_0895	SSF51445	(Trans)glycosidases
Alfi_0896	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_0897	SSF51445	(Trans)glycosidases
Alfi_0898	SSF48452	TPR-like
Alfi_0899	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0899	SSF56935	Porins
Alfi_0901	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_0901	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_0902	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0902	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_0903	SSF53955	Lysozyme-like
Alfi_0903	SSF56601	beta-lactamase/transpeptidase-like
Alfi_0904	SSF69304	Tricorn protease N-terminal domain
Alfi_0905	SSF55159	eIF1-like
Alfi_0907	SSF53633	Carbamate kinase-like
Alfi_0907	SSF55021	ACT-like
Alfi_0909	SSF50993	Peptidase/esterase 'gauge' domain
Alfi_0909	SSF53474	alpha/beta-Hydrolases
Alfi_0910	SSF51161	Trimeric LpxA-like enzymes
Alfi_0911	SSF55681	Class II aaRS and biotin synthetases
Alfi_0912	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_0914	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_0914	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0914	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Alfi_0916	SSF56349	DNA breaking-rejoining enzymes
Alfi_0921	SSF46689	Homeodomain-like
Alfi_0921	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_0921	SSF50998	Quinoprotein alcohol dehydrogenase-like
Alfi_0921	SSF52172	CheY-like
Alfi_0921	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_0921	SSF63829	Calcium-dependent phosphotriesterase
Alfi_0922	SSF49299	PKD domain
Alfi_0923	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0923	SSF56935	Porins
Alfi_0924	SSF48452	TPR-like
Alfi_0925	SSF75005	Arabinanase/levansucrase/invertase
Alfi_0926	SSF51126	Pectin lyase-like
Alfi_0927	SSF51126	Pectin lyase-like
Alfi_0928	SSF53474	alpha/beta-Hydrolases
Alfi_0929	SSF48208	Six-hairpin glycosidases
Alfi_0930	SSF51126	Pectin lyase-like
Alfi_0933	SSF53383	PLP-dependent transferases
Alfi_0935	SSF51230	Single hybrid motif
Alfi_0936	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_0936	SSF56327	LDH C-terminal domain-like
Alfi_0937	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_0937	SSF56935	Porins
Alfi_0939	SSF46557	GreA transcript cleavage protein, N-terminal domain
Alfi_0939	SSF54534	FKBP-like
Alfi_0940	SSF56024	Phospholipase D/nuclease
Alfi_0942	SSF48452	TPR-like
Alfi_0944	SSF102645	CoaB-like
Alfi_0944	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Alfi_0945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0947	SSF48592	GroEL equatorial domain-like
Alfi_0947	SSF52029	GroEL apical domain-like
Alfi_0947	SSF54849	GroEL-intermediate domain like
Alfi_0948	SSF50129	GroES-like
Alfi_0950	SSF56349	DNA breaking-rejoining enzymes
Alfi_0951	SSF46955	Putative DNA-binding domain
Alfi_0952	SSF46955	Putative DNA-binding domain
Alfi_0953	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0956	SSF103088	OmpA-like
Alfi_0956	SSF48452	TPR-like
Alfi_0957	SSF56925	OMPA-like
Alfi_0960	SSF140753	PG0816-like
Alfi_0962	SSF140931	Fic-like
Alfi_0964	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0965	SSF46689	Homeodomain-like
Alfi_0966	SSF53098	Ribonuclease H-like
Alfi_0968	SSF160574	BT0923-like
Alfi_0971	SSF160574	BT0923-like
Alfi_0972	SSF160574	BT0923-like
Alfi_0974	SSF160574	BT0923-like
Alfi_0976	SSF54534	FKBP-like
Alfi_0977	SSF160574	BT0923-like
Alfi_0978	SSF56672	DNA/RNA polymerases
Alfi_0979	SSF158446	IVS-encoded protein-like
Alfi_0985	SSF103088	OmpA-like
Alfi_0985	SSF103515	Autotransporter
Alfi_0988	SSF116726	TrkA C-terminal domain-like
Alfi_0992	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_0997	SSF56672	DNA/RNA polymerases
Alfi_1013	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_1014	SSF110849	ParB/Sulfiredoxin
Alfi_1019	SSF143081	BB1717-like
Alfi_1020	SSF56672	DNA/RNA polymerases
Alfi_1021	SSF51306	LexA/Signal peptidase
Alfi_1022	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1025	SSF47598	Ribbon-helix-helix
Alfi_1031	SSF109709	KorB DNA-binding domain-like
Alfi_1031	SSF110849	ParB/Sulfiredoxin
Alfi_1036	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1049	SSF46955	Putative DNA-binding domain
Alfi_1050	SSF143555	FwdE-like
Alfi_1050	SSF53590	Nucleoside hydrolase
Alfi_1051	SSF56935	Porins
Alfi_1052	SSF103473	MFS general substrate transporter
Alfi_1053	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1058	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1060	SSF69287	Urease metallochaperone UreE, N-terminal domain
Alfi_1061	SSF51338	Composite domain of metallo-dependent hydrolases
Alfi_1061	SSF51556	Metallo-dependent hydrolases
Alfi_1062	SSF51278	Urease, beta-subunit
Alfi_1063	SSF54111	Urease, gamma-subunit
Alfi_1065	SSF51604	Enolase C-terminal domain-like
Alfi_1065	SSF54826	Enolase N-terminal domain-like
Alfi_1068	SSF56349	DNA breaking-rejoining enzymes
Alfi_1071	SSF48208	Six-hairpin glycosidases
Alfi_1072	SSF51445	(Trans)glycosidases
Alfi_1072	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Alfi_1073	SSF101898	NHL repeat
Alfi_1073	SSF46689	Homeodomain-like
Alfi_1073	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_1073	SSF52172	CheY-like
Alfi_1073	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1073	SSF63829	Calcium-dependent phosphotriesterase
Alfi_1074	SSF51445	(Trans)glycosidases
Alfi_1074	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_1075	SSF51445	(Trans)glycosidases
Alfi_1075	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Alfi_1076	SSF51445	(Trans)glycosidases
Alfi_1076	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Alfi_1077	SSF51445	(Trans)glycosidases
Alfi_1077	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_1079	SSF51445	(Trans)glycosidases
Alfi_1080	SSF48208	Six-hairpin glycosidases
Alfi_1081	SSF56219	DNase I-like
Alfi_1082	SSF56300	Metallo-dependent phosphatases
Alfi_1083	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1083	SSF56935	Porins
Alfi_1084	SSF48452	TPR-like
Alfi_1085	SSF49785	Galactose-binding domain-like
Alfi_1086	SSF51445	(Trans)glycosidases
Alfi_1087	SSF51126	Pectin lyase-like
Alfi_1088	SSF51126	Pectin lyase-like
Alfi_1089	SSF49785	Galactose-binding domain-like
Alfi_1091	SSF51445	(Trans)glycosidases
Alfi_1091	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_1095	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1095	SSF56935	Porins
Alfi_1096	SSF48452	TPR-like
Alfi_1097	SSF56219	DNase I-like
Alfi_1098	SSF49785	Galactose-binding domain-like
Alfi_1100	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1100	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1101	SSF111337	QueA-like
Alfi_1102	SSF49785	Galactose-binding domain-like
Alfi_1103	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_1104	SSF51445	(Trans)glycosidases
Alfi_1105	SSF48452	TPR-like
Alfi_1106	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1106	SSF56935	Porins
Alfi_1108	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1108	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1109	SSF49785	Galactose-binding domain-like
Alfi_1109	SSF51445	(Trans)glycosidases
Alfi_1109	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_1110	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Alfi_1110	SSF51905	FAD/NAD(P)-binding domain
Alfi_1110	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Alfi_1111	SSF50447	Translation proteins
Alfi_1111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1111	SSF54980	EF-G C-terminal domain-like
Alfi_1112	SSF51182	RmlC-like cupins
Alfi_1116	SSF53807	"Helical backbone" metal receptor
Alfi_1117	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Alfi_1118	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1120	SSF46992	Ribosomal protein S20
Alfi_1121	SSF55326	PurM N-terminal domain-like
Alfi_1121	SSF56042	PurM C-terminal domain-like
Alfi_1122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1125	SSF54995	Ribosomal protein S6
Alfi_1126	SSF46911	Ribosomal protein S18
Alfi_1127	SSF55653	Ribosomal protein L9 C-domain
Alfi_1127	SSF55658	L9 N-domain-like
Alfi_1128	SSF103481	Multidrug resistance efflux transporter EmrE
Alfi_1129	SSF47240	Ferritin-like
Alfi_1131	SSF50249	Nucleic acid-binding proteins
Alfi_1132	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Alfi_1132	SSF56300	Metallo-dependent phosphatases
Alfi_1133	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1133	SSF55186	ThrRS/AlaRS common domain
Alfi_1134	SSF53383	PLP-dependent transferases
Alfi_1136	SSF54534	FKBP-like
Alfi_1137	SSF141571	Pentapeptide repeat-like
Alfi_1138	SSF56112	Protein kinase-like (PK-like)
Alfi_1139	SSF51161	Trimeric LpxA-like enzymes
Alfi_1140	SSF53300	vWA-like
Alfi_1142	SSF51905	FAD/NAD(P)-binding domain
Alfi_1143	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_1144	SSF55315	L30e-like
Alfi_1144	SSF75217	alpha/beta knot
Alfi_1146	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Alfi_1147	SSF52954	Class II aaRS ABD-related
Alfi_1147	SSF55186	ThrRS/AlaRS common domain
Alfi_1147	SSF55681	Class II aaRS and biotin synthetases
Alfi_1147	SSF81271	TGS-like
Alfi_1148	SSF54364	Translation initiation factor IF3, N-terminal domain
Alfi_1148	SSF55200	Translation initiation factor IF3, C-terminal domain
Alfi_1149	SSF56801	Acetyl-CoA synthetase-like
Alfi_1150	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1152	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1153	SSF53474	alpha/beta-Hydrolases
Alfi_1154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1154	SSF81923	Double Clp-N motif
Alfi_1155	SSF48019	post-AAA+ oligomerization domain-like
Alfi_1155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1156	SSF52374	Nucleotidylyl transferase
Alfi_1156	SSF55174	Alpha-L RNA-binding motif
Alfi_1157	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Alfi_1158	SSF161070	SNF-like
Alfi_1159	SSF56300	Metallo-dependent phosphatases
Alfi_1160	SSF52121	Lumazine synthase
Alfi_1161	SSF48452	TPR-like
Alfi_1162	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1164	SSF103088	OmpA-like
Alfi_1165	SSF51998	PFL-like glycyl radical enzymes
Alfi_1167	SSF55298	YjgF-like
Alfi_1169	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1169	SSF56327	LDH C-terminal domain-like
Alfi_1170	SSF56300	Metallo-dependent phosphatases
Alfi_1171	SSF111304	Recombination protein RecR
Alfi_1172	SSF48452	TPR-like
Alfi_1174	SSF117457	FumA C-terminal domain-like
Alfi_1175	SSF51569	Aldolase
Alfi_1179	SSF53474	alpha/beta-Hydrolases
Alfi_1180	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1182	SSF56112	Protein kinase-like (PK-like)
Alfi_1183	SSF53850	Periplasmic binding protein-like II
Alfi_1183	SSF55021	ACT-like
Alfi_1184	SSF48600	Chorismate mutase II
Alfi_1184	SSF51569	Aldolase
Alfi_1185	SSF46894	C-terminal effector domain of the bipartite response regulators
Alfi_1185	SSF52172	CheY-like
Alfi_1186	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_1186	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1187	SSF109755	PhoU-like
Alfi_1190	SSF46689	Homeodomain-like
Alfi_1190	SSF48452	TPR-like
Alfi_1193	SSF51998	PFL-like glycyl radical enzymes
Alfi_1194	SSF102114	Radical SAM enzymes
Alfi_1196	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1196	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_1199	SSF48371	ARM repeat
Alfi_1200	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1200	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_1204	SSF51695	PLC-like phosphodiesterases
Alfi_1206	SSF48452	TPR-like
Alfi_1207	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1207	SSF56935	Porins
Alfi_1209	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1209	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1210	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_1211	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Alfi_1211	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Alfi_1211	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_1212	SSF111369	HlyD-like secretion proteins
Alfi_1213	SSF46689	Homeodomain-like
Alfi_1213	SSF51215	Regulatory protein AraC
Alfi_1214	SSF46689	Homeodomain-like
Alfi_1215	SSF53474	alpha/beta-Hydrolases
Alfi_1216	SSF103473	MFS general substrate transporter
Alfi_1221	SSF47413	lambda repressor-like DNA-binding domains
Alfi_1222	SSF47413	lambda repressor-like DNA-binding domains
Alfi_1224	SSF53383	PLP-dependent transferases
Alfi_1225	SSF118215	Proton glutamate symport protein
Alfi_1227	SSF102114	Radical SAM enzymes
Alfi_1230	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_1230	SSF52922	TK C-terminal domain-like
Alfi_1231	SSF53633	Carbamate kinase-like
Alfi_1232	SSF52833	Thioredoxin-like
Alfi_1233	SSF55194	Ribosome recycling factor, RRF
Alfi_1234	SSF103515	Autotransporter
Alfi_1235	SSF53795	PEP carboxykinase-like
Alfi_1235	SSF68923	PEP carboxykinase N-terminal domain
Alfi_1236	SSF102114	Radical SAM enzymes
Alfi_1237	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1238	SSF48208	Six-hairpin glycosidases
Alfi_1239	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1240	SSF88713	Glycoside hydrolase/deacetylase
Alfi_1242	SSF47413	lambda repressor-like DNA-binding domains
Alfi_1244	SSF50249	Nucleic acid-binding proteins
Alfi_1244	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1245	SSF75217	alpha/beta knot
Alfi_1246	SSF53383	PLP-dependent transferases
Alfi_1247	SSF51658	Xylose isomerase-like
Alfi_1249	SSF50156	PDZ domain-like
Alfi_1249	SSF52096	ClpP/crotonase
Alfi_1252	SSF51569	Aldolase
Alfi_1253	SSF48452	TPR-like
Alfi_1254	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
Alfi_1254	SSF50249	Nucleic acid-binding proteins
Alfi_1254	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_1254	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Alfi_1254	SSF55666	Ribonuclease PH domain 2-like
Alfi_1255	SSF47060	S15/NS1 RNA-binding domain
Alfi_1256	SSF143631	ApbE-like
Alfi_1257	SSF111331	NAD kinase/diacylglycerol kinase-like
Alfi_1258	SSF46689	Homeodomain-like
Alfi_1258	SSF51215	Regulatory protein AraC
Alfi_1259	SSF56349	DNA breaking-rejoining enzymes
Alfi_1261	SSF49303	beta-Galactosidase/glucuronidase domain
Alfi_1261	SSF49785	Galactose-binding domain-like
Alfi_1261	SSF51445	(Trans)glycosidases
Alfi_1263	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Alfi_1264	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_1265	SSF50249	Nucleic acid-binding proteins
Alfi_1265	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1268	SSF53067	Actin-like ATPase domain
Alfi_1269	SSF48576	Terpenoid synthases
Alfi_1272	SSF53474	alpha/beta-Hydrolases
Alfi_1272	SSF82171	DPP6 N-terminal domain-like
Alfi_1273	SSF103473	MFS general substrate transporter
Alfi_1274	SSF141986	LD-carboxypeptidase A C-terminal domain-like
Alfi_1274	SSF52317	Class I glutamine amidotransferase-like
Alfi_1275	SSF53092	Creatinase/prolidase N-terminal domain
Alfi_1275	SSF55920	Creatinase/aminopeptidase
Alfi_1276	SSF53167	Purine and uridine phosphorylases
Alfi_1278	SSF53850	Periplasmic binding protein-like II
Alfi_1280	SSF50447	Translation proteins
Alfi_1280	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1280	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_1280	SSF54980	EF-G C-terminal domain-like
Alfi_1281	SSF109755	PhoU-like
Alfi_1283	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_1285	SSF55205	EPT/RTPC-like
Alfi_1286	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1286	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Alfi_1287	SSF46785	"Winged helix" DNA-binding domain
Alfi_1287	SSF48008	GntR ligand-binding domain-like
Alfi_1291	SSF50249	Nucleic acid-binding proteins
Alfi_1292	SSF54928	RNA-binding domain, RBD
Alfi_1293	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_1294	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Alfi_1294	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Alfi_1294	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_1295	SSF111369	HlyD-like secretion proteins
Alfi_1296	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_1296	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1297	SSF52172	CheY-like
Alfi_1298	SSF52172	CheY-like
Alfi_1300	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_1303	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1304	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1305	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1307	SSF51161	Trimeric LpxA-like enzymes
Alfi_1308	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1310	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1311	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1312	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_1312	SSF52172	CheY-like
Alfi_1312	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1313	SSF56219	DNase I-like
Alfi_1314	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1315	SSF53474	alpha/beta-Hydrolases
Alfi_1316	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1316	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_1317	SSF56317	Carbon-nitrogen hydrolase
Alfi_1318	SSF53244	MurD-like peptide ligases, peptide-binding domain
Alfi_1318	SSF53623	MurD-like peptide ligases, catalytic domain
Alfi_1319	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1319	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1322	SSF48452	TPR-like
Alfi_1323	SSF51445	(Trans)glycosidases
Alfi_1324	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_1325	SSF49785	Galactose-binding domain-like
Alfi_1325	SSF51445	(Trans)glycosidases
Alfi_1325	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_1327	SSF53649	Alkaline phosphatase-like
Alfi_1330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1333	SSF50156	PDZ domain-like
Alfi_1333	SSF52096	ClpP/crotonase
Alfi_1334	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1336	SSF69618	HemD-like
Alfi_1337	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_1339	SSF160240	Cation efflux protein cytoplasmic domain-like
Alfi_1339	SSF161111	Cation efflux protein transmembrane domain-like
Alfi_1340	SSF46894	C-terminal effector domain of the bipartite response regulators
Alfi_1342	SSF53649	Alkaline phosphatase-like
Alfi_1343	SSF53271	PRTase-like
Alfi_1344	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1345	SSF74653	TolA/TonB C-terminal domain
Alfi_1346	SSF102114	Radical SAM enzymes
Alfi_1347	SSF52833	Thioredoxin-like
Alfi_1348	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1352	SSF47413	lambda repressor-like DNA-binding domains
Alfi_1353	SSF47413	lambda repressor-like DNA-binding domains
Alfi_1354	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1355	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1355	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1356	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1357	SSF51713	tRNA-guanine transglycosylase
Alfi_1359	SSF102114	Radical SAM enzymes
Alfi_1360	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
Alfi_1361	SSF55120	Pseudouridine synthase
Alfi_1361	SSF55174	Alpha-L RNA-binding motif
Alfi_1362	SSF102114	Radical SAM enzymes
Alfi_1365	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1366	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1368	SSF51161	Trimeric LpxA-like enzymes
Alfi_1369	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1371	SSF55469	FMN-dependent nitroreductase-like
Alfi_1373	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1375	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1376	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1377	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1378	SSF51161	Trimeric LpxA-like enzymes
Alfi_1379	SSF51182	RmlC-like cupins
Alfi_1381	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1384	SSF50104	Translation proteins SH3-like domain
Alfi_1384	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Alfi_1385	SSF56349	DNA breaking-rejoining enzymes
Alfi_1387	SSF56935	Porins
Alfi_1389	SSF50249	Nucleic acid-binding proteins
Alfi_1389	SSF57863	ArfGap/RecO-like zinc finger
Alfi_1390	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1391	SSF56349	DNA breaking-rejoining enzymes
Alfi_1392	SSF49373	Invasin/intimin cell-adhesion fragments
Alfi_1394	SSF48452	TPR-like
Alfi_1395	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1395	SSF56935	Porins
Alfi_1397	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1397	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1398	SSF49303	beta-Galactosidase/glucuronidase domain
Alfi_1398	SSF49785	Galactose-binding domain-like
Alfi_1398	SSF51445	(Trans)glycosidases
Alfi_1399	SSF51556	Metallo-dependent hydrolases
Alfi_1402	SSF89919	Ribosome-binding factor A, RbfA
Alfi_1406	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Alfi_1407	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1410	SSF103515	Autotransporter
Alfi_1411	SSF48452	TPR-like
Alfi_1416	SSF143865	CorA soluble domain-like
Alfi_1416	SSF144083	Magnesium transport protein CorA, transmembrane region
Alfi_1417	SSF53850	Periplasmic binding protein-like II
Alfi_1422	SSF52096	ClpP/crotonase
Alfi_1430	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1432	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_1432	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1433	SSF56784	HAD-like
Alfi_1435	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_1436	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Alfi_1437	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1437	SSF81799	Putative methyltransferase TM0872, insert domain
Alfi_1439	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
Alfi_1439	SSF56519	Penicillin binding protein dimerisation domain
Alfi_1439	SSF56601	beta-lactamase/transpeptidase-like
Alfi_1440	SSF53244	MurD-like peptide ligases, peptide-binding domain
Alfi_1440	SSF53623	MurD-like peptide ligases, catalytic domain
Alfi_1440	SSF63418	MurE/MurF N-terminal domain
Alfi_1442	SSF51984	MurCD N-terminal domain
Alfi_1442	SSF53244	MurD-like peptide ligases, peptide-binding domain
Alfi_1442	SSF53623	MurD-like peptide ligases, catalytic domain
Alfi_1444	SSF55174	Alpha-L RNA-binding motif
Alfi_1445	SSF53178	Peptidyl-tRNA hydrolase-like
Alfi_1446	SSF50715	Ribosomal protein L25-like
Alfi_1447	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1447	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1450	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Alfi_1450	SSF51569	Aldolase
Alfi_1451	SSF53732	Aconitase iron-sulfur domain
Alfi_1452	SSF52016	LeuD/IlvD-like
Alfi_1453	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Alfi_1453	SSF51569	Aldolase
Alfi_1454	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Alfi_1455	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Alfi_1456	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_1456	SSF55060	GHMP Kinase, C-terminal domain
Alfi_1457	SSF143975	IlvD/EDD N-terminal domain-like
Alfi_1457	SSF52016	LeuD/IlvD-like
Alfi_1458	SSF52467	DHS-like NAD/FAD-binding domain
Alfi_1458	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_1459	SSF55021	ACT-like
Alfi_1460	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_1460	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1461	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_1461	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Alfi_1462	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1463	SSF53649	Alkaline phosphatase-like
Alfi_1465	SSF53383	PLP-dependent transferases
Alfi_1466	SSF46785	"Winged helix" DNA-binding domain
Alfi_1466	SSF54909	Dimeric alpha+beta barrel
Alfi_1468	SSF46689	Homeodomain-like
Alfi_1468	SSF52172	CheY-like
Alfi_1468	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1469	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Alfi_1469	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_1469	SSF52172	CheY-like
Alfi_1469	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1470	SSF53850	Periplasmic binding protein-like II
Alfi_1471	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1472	SSF55486	Metalloproteases ("zincins"), catalytic domain
Alfi_1473	SSF53748	Phosphoglycerate kinase
Alfi_1474	SSF56349	DNA breaking-rejoining enzymes
Alfi_1478	SSF57783	Zinc beta-ribbon
Alfi_1483	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1484	SSF52151	FabD/lysophospholipase-like
Alfi_1485	SSF46589	tRNA-binding arm
Alfi_1485	SSF55681	Class II aaRS and biotin synthetases
Alfi_1486	SSF48452	TPR-like
Alfi_1486	SSF81901	HCP-like
Alfi_1487	SSF51261	Duplicated hybrid motif
Alfi_1488	SSF55486	Metalloproteases ("zincins"), catalytic domain
Alfi_1489	SSF51905	FAD/NAD(P)-binding domain
Alfi_1490	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Alfi_1491	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Alfi_1491	SSF50249	Nucleic acid-binding proteins
Alfi_1491	SSF52374	Nucleotidylyl transferase
Alfi_1491	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
Alfi_1492	SSF50494	Trypsin-like serine proteases
Alfi_1493	SSF142754	NadA-like
Alfi_1494	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Alfi_1494	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1495	SSF52096	ClpP/crotonase
Alfi_1496	SSF46689	Homeodomain-like
Alfi_1497	SSF52058	L domain-like
Alfi_1498	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Alfi_1499	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Alfi_1499	SSF53098	Ribonuclease H-like
Alfi_1499	SSF56672	DNA/RNA polymerases
Alfi_1499	SSF88723	PIN domain-like
Alfi_1500	SSF56925	OMPA-like
Alfi_1502	SSF53098	Ribonuclease H-like
Alfi_1503	SSF46689	Homeodomain-like
Alfi_1503	SSF48295	TrpR-like
Alfi_1504	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Alfi_1505	SSF52972	ITPase-like
Alfi_1506	SSF56784	HAD-like
Alfi_1507	SSF55469	FMN-dependent nitroreductase-like
Alfi_1508	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_1508	SSF52172	CheY-like
Alfi_1508	SSF55785	PYP-like sensor domain (PAS domain)
Alfi_1508	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1509	SSF64182	DHH phosphoesterases
Alfi_1510	SSF55681	Class II aaRS and biotin synthetases
Alfi_1511	SSF102114	Radical SAM enzymes
Alfi_1512	SSF46689	Homeodomain-like
Alfi_1512	SSF51215	Regulatory protein AraC
Alfi_1514	SSF53098	Ribonuclease H-like
Alfi_1520	SSF53774	Glutaminase/Asparaginase
Alfi_1521	SSF51556	Metallo-dependent hydrolases
Alfi_1522	SSF102405	MCP/YpsA-like
Alfi_1522	SSF47781	RuvA domain 2-like
Alfi_1524	SSF158832	Tex N-terminal region-like
Alfi_1524	SSF47781	RuvA domain 2-like
Alfi_1524	SSF50249	Nucleic acid-binding proteins
Alfi_1524	SSF53098	Ribonuclease H-like
Alfi_1525	SSF46548	alpha-helical ferredoxin
Alfi_1525	SSF51430	NAD(P)-linked oxidoreductase
Alfi_1528	SSF53927	Cytidine deaminase-like
Alfi_1529	SSF51445	(Trans)glycosidases
Alfi_1531	SSF56801	Acetyl-CoA synthetase-like
Alfi_1532	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Alfi_1533	SSF51905	FAD/NAD(P)-binding domain
Alfi_1534	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1534	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Alfi_1534	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_1535	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1536	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_1537	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Alfi_1538	SSF88713	Glycoside hydrolase/deacetylase
Alfi_1539	SSF53901	Thiolase-like
Alfi_1540	SSF53901	Thiolase-like
Alfi_1541	SSF47336	ACP-like
Alfi_1542	SSF53901	Thiolase-like
Alfi_1543	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_1544	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_1545	SSF102114	Radical SAM enzymes
Alfi_1547	SSF47336	ACP-like
Alfi_1548	SSF53901	Thiolase-like
Alfi_1549	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1550	SSF48557	L-aspartase-like
Alfi_1551	SSF102114	Radical SAM enzymes
Alfi_1552	SSF103473	MFS general substrate transporter
Alfi_1554	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1554	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1556	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1556	SSF56935	Porins
Alfi_1557	SSF48452	TPR-like
Alfi_1558	SSF49785	Galactose-binding domain-like
Alfi_1558	SSF51445	(Trans)glycosidases
Alfi_1559	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_1560	SSF49785	Galactose-binding domain-like
Alfi_1560	SSF51445	(Trans)glycosidases
Alfi_1560	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_1561	SSF52058	L domain-like
Alfi_1562	SSF53300	vWA-like
Alfi_1563	SSF53300	vWA-like
Alfi_1564	SSF48452	TPR-like
Alfi_1566	SSF53300	vWA-like
Alfi_1567	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1568	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1569	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1570	SSF48150	DNA-glycosylase
Alfi_1571	SSF52266	SGNH hydrolase
Alfi_1572	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1573	SSF64182	DHH phosphoesterases
Alfi_1574	SSF46785	"Winged helix" DNA-binding domain
Alfi_1574	SSF53850	Periplasmic binding protein-like II
Alfi_1576	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_1579	SSF52743	Subtilisin-like
Alfi_1580	SSF52058	L domain-like
Alfi_1581	SSF52058	L domain-like
Alfi_1583	SSF141072	CalX-like
Alfi_1584	SSF48452	TPR-like
Alfi_1585	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1585	SSF56935	Porins
Alfi_1589	SSF51445	(Trans)glycosidases
Alfi_1590	SSF51445	(Trans)glycosidases
Alfi_1590	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Alfi_1591	SSF48208	Six-hairpin glycosidases
Alfi_1591	SSF56300	Metallo-dependent phosphatases
Alfi_1592	SSF49299	PKD domain
Alfi_1593	SSF48452	TPR-like
Alfi_1594	SSF46689	Homeodomain-like
Alfi_1594	SSF51215	Regulatory protein AraC
Alfi_1595	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_1597	SSF102114	Radical SAM enzymes
Alfi_1601	SSF56731	DNA primase core
Alfi_1601	SSF57783	Zinc beta-ribbon
Alfi_1603	SSF46955	Putative DNA-binding domain
Alfi_1605	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1605	SSF52980	Restriction endonuclease-like
Alfi_1606	SSF56349	DNA breaking-rejoining enzymes
Alfi_1608	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1608	SSF56935	Porins
Alfi_1609	SSF46689	Homeodomain-like
Alfi_1609	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_1609	SSF50998	Quinoprotein alcohol dehydrogenase-like
Alfi_1609	SSF52172	CheY-like
Alfi_1609	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1609	SSF63829	Calcium-dependent phosphotriesterase
Alfi_1610	SSF51445	(Trans)glycosidases
Alfi_1610	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Alfi_1612	SSF50156	PDZ domain-like
Alfi_1612	SSF52096	ClpP/crotonase
Alfi_1613	SSF50494	Trypsin-like serine proteases
Alfi_1614	SSF52972	ITPase-like
Alfi_1615	SSF56529	FAH
Alfi_1617	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1618	SSF75217	alpha/beta knot
Alfi_1619	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1620	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_1621	SSF53474	alpha/beta-Hydrolases
Alfi_1623	SSF50249	Nucleic acid-binding proteins
Alfi_1623	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1624	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Alfi_1626	SSF53927	Cytidine deaminase-like
Alfi_1627	SSF55120	Pseudouridine synthase
Alfi_1628	SSF69500	DTD-like
Alfi_1629	SSF49265	Fibronectin type III
Alfi_1629	SSF54060	His-Me finger endonucleases
Alfi_1630	SSF102114	Radical SAM enzymes
Alfi_1632	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1633	SSF53271	PRTase-like
Alfi_1634	SSF48024	N-terminal domain of DnaB helicase
Alfi_1634	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1635	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_1636	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1637	SSF51984	MurCD N-terminal domain
Alfi_1637	SSF53244	MurD-like peptide ligases, peptide-binding domain
Alfi_1637	SSF53623	MurD-like peptide ligases, catalytic domain
Alfi_1639	SSF53067	Actin-like ATPase domain
Alfi_1640	SSF52490	Tubulin nucleotide-binding domain-like
Alfi_1640	SSF55307	Tubulin C-terminal domain-like
Alfi_1641	SSF54631	CBS-domain pair
Alfi_1641	SSF56176	FAD-binding/transporter-associated domain-like
Alfi_1642	SSF56214	4'-phosphopantetheinyl transferase
Alfi_1644	SSF141571	Pentapeptide repeat-like
Alfi_1645	SSF54001	Cysteine proteinases
Alfi_1646	SSF56712	Prokaryotic type I DNA topoisomerase
Alfi_1648	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1649	SSF111337	QueA-like
Alfi_1650	SSF55120	Pseudouridine synthase
Alfi_1655	SSF48576	Terpenoid synthases
Alfi_1656	SSF103473	MFS general substrate transporter
Alfi_1657	SSF50104	Translation proteins SH3-like domain
Alfi_1658	SSF64167	SurE-like
Alfi_1659	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_1660	SSF46894	C-terminal effector domain of the bipartite response regulators
Alfi_1660	SSF52172	CheY-like
Alfi_1661	SSF56024	Phospholipase D/nuclease
Alfi_1663	SSF88713	Glycoside hydrolase/deacetylase
Alfi_1664	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Alfi_1665	SSF50104	Translation proteins SH3-like domain
Alfi_1665	SSF50249	Nucleic acid-binding proteins
Alfi_1667	SSF48452	TPR-like
Alfi_1669	SSF48208	Six-hairpin glycosidases
Alfi_1673	SSF51445	(Trans)glycosidases
Alfi_1674	SSF103473	MFS general substrate transporter
Alfi_1675	SSF46689	Homeodomain-like
Alfi_1676	SSF51445	(Trans)glycosidases
Alfi_1677	SSF48557	L-aspartase-like
Alfi_1678	SSF53187	Zn-dependent exopeptidases
Alfi_1678	SSF55031	Bacterial exopeptidase dimerisation domain
Alfi_1679	SSF53633	Carbamate kinase-like
Alfi_1680	SSF53671	Aspartate/ornithine carbamoyltransferase
Alfi_1681	SSF53383	PLP-dependent transferases
Alfi_1682	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1682	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_1683	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_1683	SSF69864	Argininosuccinate synthetase, C-terminal domain
Alfi_1684	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_1685	SSF109604	HD-domain/PDEase-like
Alfi_1685	SSF55021	ACT-like
Alfi_1685	SSF81271	TGS-like
Alfi_1685	SSF81301	Nucleotidyltransferase
Alfi_1687	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1688	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_1689	SSF116842	XseB-like
Alfi_1693	SSF56935	Porins
Alfi_1693	SSF74653	TolA/TonB C-terminal domain
Alfi_1694	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Alfi_1695	SSF75620	Release factor
Alfi_1696	SSF53474	alpha/beta-Hydrolases
Alfi_1697	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Alfi_1697	SSF50677	ValRS/IleRS/LeuRS editing domain
Alfi_1697	SSF52374	Nucleotidylyl transferase
Alfi_1699	SSF50249	Nucleic acid-binding proteins
Alfi_1700	SSF47973	Ribosomal protein S7
Alfi_1701	SSF50447	Translation proteins
Alfi_1701	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1701	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_1701	SSF54980	EF-G C-terminal domain-like
Alfi_1702	SSF54999	Ribosomal protein S10
Alfi_1703	SSF50447	Translation proteins
Alfi_1704	SSF52166	Ribosomal protein L4
Alfi_1705	SSF54189	Ribosomal proteins S24e, L23 and L15e
Alfi_1706	SSF50104	Translation proteins SH3-like domain
Alfi_1706	SSF50249	Nucleic acid-binding proteins
Alfi_1707	SSF54570	Ribosomal protein S19
Alfi_1708	SSF54843	Ribosomal protein L22
Alfi_1709	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Alfi_1709	SSF54821	Ribosomal protein S3 C-terminal domain
Alfi_1710	SSF54686	Ribosomal protein L16p/L10e
Alfi_1711	SSF46561	Ribosomal protein L29 (L29p)
Alfi_1712	SSF50249	Nucleic acid-binding proteins
Alfi_1713	SSF50193	Ribosomal protein L14
Alfi_1714	SSF50104	Translation proteins SH3-like domain
Alfi_1715	SSF55282	RL5-like
Alfi_1716	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Alfi_1718	SSF56047	Ribosomal protein S8
Alfi_1719	SSF56053	Ribosomal protein L6
Alfi_1720	SSF53137	Translational machinery components
Alfi_1721	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_1721	SSF54768	dsRNA-binding domain-like
Alfi_1722	SSF55129	Ribosomal protein L30p/L7e
Alfi_1723	SSF52080	Ribosomal proteins L15p and L18e
Alfi_1724	SSF103491	Preprotein translocase SecY subunit
Alfi_1725	SSF55920	Creatinase/aminopeptidase
Alfi_1726	SSF50249	Nucleic acid-binding proteins
Alfi_1727	SSF57840	Ribosomal protein L36
Alfi_1728	SSF46946	S13-like H2TH domain
Alfi_1729	SSF53137	Translational machinery components
Alfi_1730	SSF55174	Alpha-L RNA-binding motif
Alfi_1731	SSF47789	C-terminal domain of RNA polymerase alpha subunit
Alfi_1731	SSF55257	RBP11-like subunits of RNA polymerase
Alfi_1731	SSF56553	Insert subdomain of RNA polymerase alpha subunit
Alfi_1732	SSF64263	Prokaryotic ribosomal protein L17
Alfi_1733	SSF53098	Ribonuclease H-like
Alfi_1734	SSF46689	Homeodomain-like
Alfi_1734	SSF48295	TrpR-like
Alfi_1735	SSF51658	Xylose isomerase-like
Alfi_1737	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1737	SSF56300	Metallo-dependent phosphatases
Alfi_1738	SSF48452	TPR-like
Alfi_1739	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1739	SSF56935	Porins
Alfi_1741	SSF53067	Actin-like ATPase domain
Alfi_1742	SSF103473	MFS general substrate transporter
Alfi_1743	SSF51905	FAD/NAD(P)-binding domain
Alfi_1744	SSF56219	DNase I-like
Alfi_1745	SSF53254	Phosphoglycerate mutase-like
Alfi_1746	SSF51351	Triosephosphate isomerase (TIM)
Alfi_1747	SSF50249	Nucleic acid-binding proteins
Alfi_1747	SSF55681	Class II aaRS and biotin synthetases
Alfi_1748	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Alfi_1750	SSF52266	SGNH hydrolase
Alfi_1752	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1754	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1758	SSF52218	Flavoproteins
Alfi_1759	SSF102114	Radical SAM enzymes
Alfi_1759	SSF47781	RuvA domain 2-like
Alfi_1764	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Alfi_1764	SSF56672	DNA/RNA polymerases
Alfi_1765	SSF55469	FMN-dependent nitroreductase-like
Alfi_1768	SSF51011	Glycosyl hydrolase domain
Alfi_1768	SSF51445	(Trans)glycosidases
Alfi_1769	SSF47240	Ferritin-like
Alfi_1773	SSF47240	Ferritin-like
Alfi_1774	SSF160574	BT0923-like
Alfi_1775	SSF143081	BB1717-like
Alfi_1778	SSF51445	(Trans)glycosidases
Alfi_1778	SSF81296	E set domains
Alfi_1779	SSF50182	Sm-like ribonucleoproteins
Alfi_1779	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Alfi_1779	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Alfi_1783	SSF56935	Porins
Alfi_1784	SSF52954	Class II aaRS ABD-related
Alfi_1784	SSF55681	Class II aaRS and biotin synthetases
Alfi_1784	SSF64586	C-terminal domain of ProRS
Alfi_1785	SSF160240	Cation efflux protein cytoplasmic domain-like
Alfi_1785	SSF161111	Cation efflux protein transmembrane domain-like
Alfi_1786	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_1786	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_1788	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Alfi_1791	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_1795	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Alfi_1800	SSF140931	Fic-like
Alfi_1801	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
Alfi_1804	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1805	SSF116734	DNA methylase specificity domain
Alfi_1809	SSF56349	DNA breaking-rejoining enzymes
Alfi_1812	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1815	SSF46689	Homeodomain-like
Alfi_1816	SSF53098	Ribonuclease H-like
Alfi_1820	SSF51445	(Trans)glycosidases
Alfi_1821	SSF49373	Invasin/intimin cell-adhesion fragments
Alfi_1821	SSF54001	Cysteine proteinases
Alfi_1822	SSF110395	CutC-like
Alfi_1826	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1826	SSF56935	Porins
Alfi_1827	SSF48452	TPR-like
Alfi_1829	SSF52743	Subtilisin-like
Alfi_1833	SSF56349	DNA breaking-rejoining enzymes
Alfi_1835	SSF51905	FAD/NAD(P)-binding domain
Alfi_1836	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_1837	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1838	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_1841	SSF69754	Ribosome binding protein Y (YfiA homologue)
Alfi_1842	SSF56349	DNA breaking-rejoining enzymes
Alfi_1843	SSF53474	alpha/beta-Hydrolases
Alfi_1844	SSF50475	FMN-binding split barrel
Alfi_1845	SSF103473	MFS general substrate transporter
Alfi_1846	SSF48239	Terpenoid cyclases/Protein prenyltransferases
Alfi_1847	SSF53955	Lysozyme-like
Alfi_1847	SSF56601	beta-lactamase/transpeptidase-like
Alfi_1849	SSF49303	beta-Galactosidase/glucuronidase domain
Alfi_1849	SSF49785	Galactose-binding domain-like
Alfi_1849	SSF51445	(Trans)glycosidases
Alfi_1849	SSF74650	Galactose mutarotase-like
Alfi_1850	SSF53649	Alkaline phosphatase-like
Alfi_1851	SSF49303	beta-Galactosidase/glucuronidase domain
Alfi_1851	SSF49785	Galactose-binding domain-like
Alfi_1851	SSF51445	(Trans)glycosidases
Alfi_1852	SSF53649	Alkaline phosphatase-like
Alfi_1853	SSF49303	beta-Galactosidase/glucuronidase domain
Alfi_1853	SSF74650	Galactose mutarotase-like
Alfi_1854	SSF51445	(Trans)glycosidases
Alfi_1854	SSF52317	Class I glutamine amidotransferase-like
Alfi_1857	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_1859	SSF140931	Fic-like
Alfi_1865	SSF103473	MFS general substrate transporter
Alfi_1867	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1874	SSF52309	N-(deoxy)ribosyltransferase-like
Alfi_1881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1884	SSF56925	OMPA-like
Alfi_1907	SSF48452	TPR-like
Alfi_1911	SSF51261	Duplicated hybrid motif
Alfi_1916	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1917	SSF46785	"Winged helix" DNA-binding domain
Alfi_1920	SSF56349	DNA breaking-rejoining enzymes
Alfi_1921	SSF56349	DNA breaking-rejoining enzymes
Alfi_1925	SSF46955	Putative DNA-binding domain
Alfi_1926	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_1931	SSF51445	(Trans)glycosidases
Alfi_1932	SSF51011	Glycosyl hydrolase domain
Alfi_1932	SSF51445	(Trans)glycosidases
Alfi_1932	SSF81296	E set domains
Alfi_1933	SSF51011	Glycosyl hydrolase domain
Alfi_1933	SSF51445	(Trans)glycosidases
Alfi_1934	SSF51011	Glycosyl hydrolase domain
Alfi_1934	SSF51445	(Trans)glycosidases
Alfi_1936	SSF48452	TPR-like
Alfi_1937	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1937	SSF56935	Porins
Alfi_1938	SSF103473	MFS general substrate transporter
Alfi_1941	SSF52172	CheY-like
Alfi_1942	SSF49452	Starch-binding domain-like
Alfi_1942	SSF51445	(Trans)glycosidases
Alfi_1952	SSF46946	S13-like H2TH domain
Alfi_1952	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Alfi_1952	SSF81624	N-terminal domain of MutM-like DNA repair proteins
Alfi_1955	SSF53474	alpha/beta-Hydrolases
Alfi_1957	SSF54506	Diaminopimelate epimerase-like
Alfi_1958	SSF55469	FMN-dependent nitroreductase-like
Alfi_1960	SSF46689	Homeodomain-like
Alfi_1961	SSF111384	OmpH-like
Alfi_1962	SSF111384	OmpH-like
Alfi_1964	SSF64005	Undecaprenyl diphosphate synthase
Alfi_1965	SSF111331	NAD kinase/diacylglycerol kinase-like
Alfi_1966	SSF63892	Pyridoxine 5'-phosphate synthase
Alfi_1967	SSF52266	SGNH hydrolase
Alfi_1968	SSF81301	Nucleotidyltransferase
Alfi_1968	SSF81891	Poly A polymerase C-terminal region-like
Alfi_1969	SSF103481	Multidrug resistance efflux transporter EmrE
Alfi_1970	SSF103481	Multidrug resistance efflux transporter EmrE
Alfi_1971	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_1972	SSF55821	YrdC/RibB
Alfi_1973	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Alfi_1974	SSF75625	YebC-like
Alfi_1975	SSF89550	PHP domain-like
Alfi_1976	SSF47240	Ferritin-like
Alfi_1977	SSF53697	SIS domain
Alfi_1978	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_1978	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1979	SSF53067	Actin-like ATPase domain
Alfi_1982	SSF56519	Penicillin binding protein dimerisation domain
Alfi_1982	SSF56601	beta-lactamase/transpeptidase-like
Alfi_1984	SSF56784	HAD-like
Alfi_1984	SSF81653	Calcium ATPase, transduction domain A
Alfi_1984	SSF81665	Calcium ATPase, transmembrane domain M
Alfi_1985	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Alfi_1986	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_1986	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Alfi_1987	SSF52172	CheY-like
Alfi_1987	SSF56059	Glutathione synthetase ATP-binding domain-like
Alfi_1989	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_1990	SSF101790	Aminomethyltransferase beta-barrel domain
Alfi_1990	SSF103025	Folate-binding domain
Alfi_1991	SSF51395	FMN-linked oxidoreductases
Alfi_1995	SSF52266	SGNH hydrolase
Alfi_1996	SSF51695	PLC-like phosphodiesterases
Alfi_1997	SSF48537	Phospholipase C/P1 nuclease
Alfi_1998	SSF48452	TPR-like
Alfi_1999	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_1999	SSF56935	Porins
Alfi_2001	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_2001	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_2002	SSF109604	HD-domain/PDEase-like
Alfi_2006	SSF109604	HD-domain/PDEase-like
Alfi_2006	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Alfi_2007	SSF102829	Cell division protein ZapA-like
Alfi_2009	SSF102114	Radical SAM enzymes
Alfi_2012	SSF56219	DNase I-like
Alfi_2013	SSF48452	TPR-like
Alfi_2014	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_2014	SSF56935	Porins
Alfi_2015	SSF47364	Domain of the SRP/SRP receptor G-proteins
Alfi_2015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2017	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_2018	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_2020	SSF57829	Zn-binding ribosomal proteins
Alfi_2021	SSF143800	L28p-like
Alfi_2022	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_2022	SSF48452	TPR-like
Alfi_2022	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_2023	SSF142433	CinA-like
Alfi_2024	SSF142433	CinA-like
Alfi_2024	SSF53218	Molybdenum cofactor biosynthesis proteins
Alfi_2025	SSF51395	FMN-linked oxidoreductases
Alfi_2026	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2026	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Alfi_2027	SSF52768	Arginase/deacetylase
Alfi_2029	SSF54534	FKBP-like
Alfi_2030	SSF54534	FKBP-like
Alfi_2031	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_2034	SSF48537	Phospholipase C/P1 nuclease
Alfi_2035	SSF143800	L28p-like
Alfi_2036	SSF75712	Rad50 coiled-coil Zn hook
Alfi_2037	SSF46689	Homeodomain-like
Alfi_2038	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_2042	SSF50447	Translation proteins
Alfi_2042	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Alfi_2042	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2045	SSF50104	Translation proteins SH3-like domain
Alfi_2045	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Alfi_2046	SSF46906	Ribosomal protein L11, C-terminal domain
Alfi_2046	SSF54747	Ribosomal L11/L12e N-terminal domain
Alfi_2047	SSF56808	Ribosomal protein L1
Alfi_2048	SSF160369	Ribosomal protein L10-like
Alfi_2049	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Alfi_2049	SSF54736	ClpS-like
Alfi_2050	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Alfi_2051	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Alfi_2052	SSF143548	Serine metabolism enzymes domain
Alfi_2054	SSF56935	Porins
Alfi_2055	SSF53383	PLP-dependent transferases
Alfi_2056	SSF47729	IHF-like DNA-binding proteins
Alfi_2058	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2059	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2064	SSF51445	(Trans)glycosidases
Alfi_2066	SSF48452	TPR-like
Alfi_2067	SSF69304	Tricorn protease N-terminal domain
Alfi_2068	SSF51445	(Trans)glycosidases
Alfi_2069	SSF52266	SGNH hydrolase
Alfi_2071	SSF51445	(Trans)glycosidases
Alfi_2072	SSF51445	(Trans)glycosidases
Alfi_2073	SSF103473	MFS general substrate transporter
Alfi_2074	SSF48208	Six-hairpin glycosidases
Alfi_2075	SSF56300	Metallo-dependent phosphatases
Alfi_2076	SSF51905	FAD/NAD(P)-binding domain
Alfi_2077	SSF51445	(Trans)glycosidases
Alfi_2078	SSF52266	SGNH hydrolase
Alfi_2080	SSF56784	HAD-like
Alfi_2081	SSF52172	CheY-like
Alfi_2081	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2083	SSF52833	Thioredoxin-like
Alfi_2084	SSF56300	Metallo-dependent phosphatases
Alfi_2085	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
Alfi_2086	SSF51126	Pectin lyase-like
Alfi_2087	SSF51126	Pectin lyase-like
Alfi_2088	SSF48452	TPR-like
Alfi_2089	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_2089	SSF56935	Porins
Alfi_2090	SSF49373	Invasin/intimin cell-adhesion fragments
Alfi_2091	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2091	SSF53822	Periplasmic binding protein-like I
Alfi_2092	SSF51445	(Trans)glycosidases
Alfi_2098	SSF53597	Dihydrofolate reductase-like
Alfi_2099	SSF46548	alpha-helical ferredoxin
Alfi_2101	SSF51905	FAD/NAD(P)-binding domain
Alfi_2102	SSF46548	alpha-helical ferredoxin
Alfi_2103	SSF46548	alpha-helical ferredoxin
Alfi_2104	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Alfi_2107	SSF56672	DNA/RNA polymerases
Alfi_2109	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2110	SSF53098	Ribonuclease H-like
Alfi_2111	SSF46689	Homeodomain-like
Alfi_2115	SSF56349	DNA breaking-rejoining enzymes
Alfi_2117	SSF46955	Putative DNA-binding domain
Alfi_2121	SSF109709	KorB DNA-binding domain-like
Alfi_2121	SSF110849	ParB/Sulfiredoxin
Alfi_2122	SSF46689	Homeodomain-like
Alfi_2122	SSF48295	TrpR-like
Alfi_2123	SSF53098	Ribonuclease H-like
Alfi_2125	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_2127	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_2127	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_2132	SSF143081	BB1717-like
Alfi_2133	SSF56672	DNA/RNA polymerases
Alfi_2134	SSF51306	LexA/Signal peptidase
Alfi_2135	SSF48452	TPR-like
Alfi_2138	SSF56925	OMPA-like
Alfi_2141	SSF56935	Porins
Alfi_2157	SSF56672	DNA/RNA polymerases
Alfi_2163	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2168	SSF52743	Subtilisin-like
Alfi_2170	SSF55486	Metalloproteases ("zincins"), catalytic domain
Alfi_2171	SSF52058	L domain-like
Alfi_2178	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2185	SSF140753	PG0816-like
Alfi_2209	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2209	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_2217	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2221	SSF52833	Thioredoxin-like
Alfi_2222	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2223	SSF53613	Ribokinase-like
Alfi_2224	SSF53784	Phosphofructokinase
Alfi_2227	SSF46785	"Winged helix" DNA-binding domain
Alfi_2230	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_2230	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_2236	SSF46548	alpha-helical ferredoxin
Alfi_2236	SSF54292	2Fe-2S ferredoxin-like
Alfi_2237	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Alfi_2237	SSF51905	FAD/NAD(P)-binding domain
Alfi_2237	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Alfi_2238	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Alfi_2239	SSF100950	NagB/RpiA/CoA transferase-like
Alfi_2241	SSF52151	FabD/lysophospholipase-like
Alfi_2244	SSF46600	C-terminal UvrC-binding domain of UvrB
Alfi_2244	SSF47781	RuvA domain 2-like
Alfi_2244	SSF82771	GIY-YIG endonuclease
Alfi_2248	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_2248	SSF56935	Porins
Alfi_2249	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_2251	SSF116726	TrkA C-terminal domain-like
Alfi_2253	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2254	SSF53807	"Helical backbone" metal receptor
Alfi_2255	SSF49299	PKD domain
Alfi_2259	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
Alfi_2261	SSF47170	Aspartate receptor, ligand-binding domain
Alfi_2264	SSF56731	DNA primase core
Alfi_2264	SSF57783	Zinc beta-ribbon
Alfi_2266	SSF46955	Putative DNA-binding domain
Alfi_2271	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2272	SSF56349	DNA breaking-rejoining enzymes
Alfi_2273	SSF46689	Homeodomain-like
Alfi_2274	SSF102114	Radical SAM enzymes
Alfi_2275	SSF51998	PFL-like glycyl radical enzymes
Alfi_2280	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2281	SSF48371	ARM repeat
Alfi_2282	SSF56935	Porins
Alfi_2284	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Alfi_2285	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_2289	SSF46785	"Winged helix" DNA-binding domain
Alfi_2290	SSF103473	MFS general substrate transporter
Alfi_2295	SSF52266	SGNH hydrolase
Alfi_2296	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_2297	SSF48150	DNA-glycosylase
Alfi_2297	SSF55811	Nudix
Alfi_2300	SSF56784	HAD-like
Alfi_2301	SSF51695	PLC-like phosphodiesterases
Alfi_2302	SSF49363	Purple acid phosphatase, N-terminal domain
Alfi_2302	SSF56300	Metallo-dependent phosphatases
Alfi_2303	SSF56796	Dehydroquinate synthase-like
Alfi_2304	SSF103473	MFS general substrate transporter
Alfi_2305	SSF100950	NagB/RpiA/CoA transferase-like
Alfi_2305	SSF46785	"Winged helix" DNA-binding domain
Alfi_2306	SSF52058	L domain-like
Alfi_2307	SSF51338	Composite domain of metallo-dependent hydrolases
Alfi_2307	SSF51556	Metallo-dependent hydrolases
Alfi_2308	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
Alfi_2308	SSF52317	Class I glutamine amidotransferase-like
Alfi_2309	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
Alfi_2309	SSF52335	Methylglyoxal synthase-like
Alfi_2309	SSF52440	PreATP-grasp domain
Alfi_2309	SSF56059	Glutathione synthetase ATP-binding domain-like
Alfi_2310	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Alfi_2310	SSF63380	Riboflavin synthase domain-like
Alfi_2311	SSF51395	FMN-linked oxidoreductases
Alfi_2312	SSF51366	Ribulose-phoshate binding barrel
Alfi_2313	SSF52833	Thioredoxin-like
Alfi_2314	SSF53271	PRTase-like
Alfi_2315	SSF53671	Aspartate/ornithine carbamoyltransferase
Alfi_2315	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
Alfi_2316	SSF103473	MFS general substrate transporter
Alfi_2317	SSF75005	Arabinanase/levansucrase/invertase
Alfi_2318	SSF48208	Six-hairpin glycosidases
Alfi_2319	SSF49785	Galactose-binding domain-like
Alfi_2319	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_2320	SSF48208	Six-hairpin glycosidases
Alfi_2321	SSF48208	Six-hairpin glycosidases
Alfi_2322	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Alfi_2323	SSF51246	Rudiment single hybrid motif
Alfi_2323	SSF52440	PreATP-grasp domain
Alfi_2323	SSF56059	Glutathione synthetase ATP-binding domain-like
Alfi_2324	SSF52317	Class I glutamine amidotransferase-like
Alfi_2324	SSF55326	PurM N-terminal domain-like
Alfi_2324	SSF56042	PurM C-terminal domain-like
Alfi_2325	SSF56219	DNase I-like
Alfi_2326	SSF56104	SAICAR synthase-like
Alfi_2327	SSF53271	PRTase-like
Alfi_2327	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Alfi_2328	SSF55326	PurM N-terminal domain-like
Alfi_2328	SSF56042	PurM C-terminal domain-like
Alfi_2329	SSF53328	Formyltransferase
Alfi_2330	SSF50475	FMN-binding split barrel
Alfi_2331	SSF52335	Methylglyoxal synthase-like
Alfi_2331	SSF53927	Cytidine deaminase-like
Alfi_2332	SSF51246	Rudiment single hybrid motif
Alfi_2332	SSF52440	PreATP-grasp domain
Alfi_2332	SSF56059	Glutathione synthetase ATP-binding domain-like
Alfi_2333	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2333	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Alfi_2335	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_2336	SSF53649	Alkaline phosphatase-like
Alfi_2337	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Alfi_2337	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Alfi_2339	SSF56935	Porins
Alfi_2340	SSF46894	C-terminal effector domain of the bipartite response regulators
Alfi_2341	SSF75217	alpha/beta knot
Alfi_2342	SSF49303	beta-Galactosidase/glucuronidase domain
Alfi_2342	SSF49785	Galactose-binding domain-like
Alfi_2342	SSF51445	(Trans)glycosidases
Alfi_2343	SSF50249	Nucleic acid-binding proteins
Alfi_2343	SSF55681	Class II aaRS and biotin synthetases
Alfi_2346	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2346	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Alfi_2348	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_2348	SSF56317	Carbon-nitrogen hydrolase
Alfi_2349	SSF53187	Zn-dependent exopeptidases
Alfi_2349	SSF55031	Bacterial exopeptidase dimerisation domain
Alfi_2353	SSF101386	all-alpha NTP pyrophosphatases
Alfi_2354	SSF49452	Starch-binding domain-like
Alfi_2354	SSF51445	(Trans)glycosidases
Alfi_2355	SSF53474	alpha/beta-Hydrolases
Alfi_2356	SSF53244	MurD-like peptide ligases, peptide-binding domain
Alfi_2356	SSF53623	MurD-like peptide ligases, catalytic domain
Alfi_2356	SSF63418	MurE/MurF N-terminal domain
Alfi_2357	SSF159283	Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
Alfi_2357	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2360	SSF53955	Lysozyme-like
Alfi_2371	SSF53474	alpha/beta-Hydrolases
Alfi_2371	SSF82171	DPP6 N-terminal domain-like
Alfi_2372	SSF55811	Nudix
Alfi_2374	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2375	SSF55961	Bet v1-like
Alfi_2376	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2377	SSF52172	CheY-like
Alfi_2377	SSF53649	Alkaline phosphatase-like
Alfi_2378	SSF47729	IHF-like DNA-binding proteins
Alfi_2380	SSF50249	Nucleic acid-binding proteins
Alfi_2381	SSF141259	CarD-like
Alfi_2381	SSF143517	TRCF domain-like
Alfi_2381	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2382	SSF53067	Actin-like ATPase domain
Alfi_2383	SSF56935	Porins
Alfi_2384	SSF48452	TPR-like
Alfi_2386	SSF54631	CBS-domain pair
Alfi_2386	SSF56176	FAD-binding/transporter-associated domain-like
Alfi_2387	SSF109998	Triger factor/SurA peptide-binding domain-like
Alfi_2387	SSF54534	FKBP-like
Alfi_2388	SSF56796	Dehydroquinate synthase-like
Alfi_2389	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Alfi_2389	SSF52242	Cobalamin (vitamin B12)-binding domain
Alfi_2390	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Alfi_2390	SSF52242	Cobalamin (vitamin B12)-binding domain
Alfi_2391	SSF55931	Glutamine synthetase/guanido kinase
Alfi_2393	SSF53067	Actin-like ATPase domain
Alfi_2394	SSF53697	SIS domain
Alfi_2395	SSF143968	UbiD C-terminal domain-like
Alfi_2395	SSF50475	FMN-binding split barrel
Alfi_2396	SSF47781	RuvA domain 2-like
Alfi_2400	SSF46689	Homeodomain-like
Alfi_2400	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_2400	SSF52172	CheY-like
Alfi_2400	SSF53822	Periplasmic binding protein-like I
Alfi_2400	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_2403	SSF49785	Galactose-binding domain-like
Alfi_2404	SSF48452	TPR-like
Alfi_2407	SSF53613	Ribokinase-like
Alfi_2408	SSF103473	MFS general substrate transporter
Alfi_2409	SSF53098	Ribonuclease H-like
Alfi_2410	SSF46689	Homeodomain-like
Alfi_2413	SSF103473	MFS general substrate transporter
Alfi_2414	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_2414	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_2416	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_2416	SSF56935	Porins
Alfi_2417	SSF48452	TPR-like
Alfi_2419	SSF51695	PLC-like phosphodiesterases
Alfi_2420	SSF51695	PLC-like phosphodiesterases
Alfi_2421	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_2421	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2422	SSF56219	DNase I-like
Alfi_2423	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_2423	SSF52922	TK C-terminal domain-like
Alfi_2426	SSF56349	DNA breaking-rejoining enzymes
Alfi_2427	SSF56349	DNA breaking-rejoining enzymes
Alfi_2428	SSF46955	Putative DNA-binding domain
Alfi_2429	SSF46955	Putative DNA-binding domain
Alfi_2435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2436	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Alfi_2437	SSF53807	"Helical backbone" metal receptor
Alfi_2438	SSF56935	Porins
Alfi_2439	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Alfi_2440	SSF52058	L domain-like
Alfi_2443	SSF56349	DNA breaking-rejoining enzymes
Alfi_2444	SSF56349	DNA breaking-rejoining enzymes
Alfi_2446	SSF56349	DNA breaking-rejoining enzymes
Alfi_2447	SSF46785	"Winged helix" DNA-binding domain
Alfi_2448	SSF56935	Porins
Alfi_2449	SSF69360	Cell wall binding repeat
Alfi_2451	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
Alfi_2451	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Alfi_2452	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Alfi_2452	SSF50677	ValRS/IleRS/LeuRS editing domain
Alfi_2452	SSF52374	Nucleotidylyl transferase
Alfi_2453	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_2453	SSF55785	PYP-like sensor domain (PAS domain)
Alfi_2453	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_2454	SSF51161	Trimeric LpxA-like enzymes
Alfi_2455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2455	SSF90123	ABC transporter transmembrane region
Alfi_2456	SSF53098	Ribonuclease H-like
Alfi_2457	SSF46589	tRNA-binding arm
Alfi_2457	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Alfi_2457	SSF50677	ValRS/IleRS/LeuRS editing domain
Alfi_2457	SSF52374	Nucleotidylyl transferase
Alfi_2458	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2458	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_2458	SSF88697	PUA domain-like
Alfi_2459	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2460	SSF51569	Aldolase
Alfi_2461	SSF53697	SIS domain
Alfi_2461	SSF54631	CBS-domain pair
Alfi_2462	SSF54909	Dimeric alpha+beta barrel
Alfi_2463	SSF51445	(Trans)glycosidases
Alfi_2465	SSF54631	CBS-domain pair
Alfi_2465	SSF81340	Clc chloride channel
Alfi_2466	SSF52374	Nucleotidylyl transferase
Alfi_2467	SSF46785	"Winged helix" DNA-binding domain
Alfi_2467	SSF53850	Periplasmic binding protein-like II
Alfi_2468	SSF81301	Nucleotidyltransferase
Alfi_2469	SSF140990	FtsH protease domain-like
Alfi_2469	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2473	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2473	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Alfi_2474	SSF53098	Ribonuclease H-like
Alfi_2475	SSF46689	Homeodomain-like
Alfi_2475	SSF48295	TrpR-like
Alfi_2476	SSF49265	Fibronectin type III
Alfi_2477	SSF69304	Tricorn protease N-terminal domain
Alfi_2478	SSF63411	LuxS/MPP-like metallohydrolase
Alfi_2480	SSF50692	ADC-like
Alfi_2481	SSF52374	Nucleotidylyl transferase
Alfi_2485	SSF57802	Rubredoxin-like
Alfi_2487	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2488	SSF50475	FMN-binding split barrel
Alfi_2489	SSF51261	Duplicated hybrid motif
Alfi_2490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2491	SSF53167	Purine and uridine phosphorylases
Alfi_2492	SSF50249	Nucleic acid-binding proteins
Alfi_2493	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2494	SSF53927	Cytidine deaminase-like
Alfi_2495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2495	SSF81767	Pre-protein crosslinking domain of SecA
Alfi_2495	SSF81886	Helical scaffold and wing domains of SecA
Alfi_2496	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2497	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2499	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Alfi_2500	SSF82649	SufE/NifU
Alfi_2501	SSF53649	Alkaline phosphatase-like
Alfi_2502	SSF52266	SGNH hydrolase
Alfi_2503	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_2503	SSF55060	GHMP Kinase, C-terminal domain
Alfi_2504	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
Alfi_2507	SSF46955	Putative DNA-binding domain
Alfi_2508	SSF46689	Homeodomain-like
Alfi_2508	SSF48295	TrpR-like
Alfi_2509	SSF53098	Ribonuclease H-like
Alfi_2510	SSF56349	DNA breaking-rejoining enzymes
Alfi_2513	SSF50447	Translation proteins
Alfi_2513	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2513	SSF54980	EF-G C-terminal domain-like
Alfi_2514	SSF56796	Dehydroquinate synthase-like
Alfi_2515	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2515	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Alfi_2517	SSF46785	"Winged helix" DNA-binding domain
Alfi_2517	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2519	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_2519	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_2520	SSF56925	OMPA-like
Alfi_2523	SSF63380	Riboflavin synthase domain-like
Alfi_2524	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_2524	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_2529	SSF46600	C-terminal UvrC-binding domain of UvrB
Alfi_2529	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2530	SSF56731	DNA primase core
Alfi_2530	SSF57783	Zinc beta-ribbon
Alfi_2532	SSF74982	Small protein B (SmpB)
Alfi_2533	SSF56784	HAD-like
Alfi_2534	SSF53067	Actin-like ATPase domain
Alfi_2536	SSF51011	Glycosyl hydrolase domain
Alfi_2536	SSF51445	(Trans)glycosidases
Alfi_2540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2542	SSF51366	Ribulose-phoshate binding barrel
Alfi_2543	SSF109604	HD-domain/PDEase-like
Alfi_2544	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2545	SSF55315	L30e-like
Alfi_2545	SSF75217	alpha/beta knot
Alfi_2548	SSF103473	MFS general substrate transporter
Alfi_2549	SSF51905	FAD/NAD(P)-binding domain
Alfi_2549	SSF54373	FAD-linked reductases, C-terminal domain
Alfi_2550	SSF100950	NagB/RpiA/CoA transferase-like
Alfi_2550	SSF46785	"Winged helix" DNA-binding domain
Alfi_2551	SSF46894	C-terminal effector domain of the bipartite response regulators
Alfi_2552	SSF49899	Concanavalin A-like lectins/glucanases
Alfi_2553	SSF51695	PLC-like phosphodiesterases
Alfi_2554	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_2554	SSF55060	GHMP Kinase, C-terminal domain
Alfi_2556	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_2557	SSF46785	"Winged helix" DNA-binding domain
Alfi_2557	SSF53067	Actin-like ATPase domain
Alfi_2558	SSF52151	FabD/lysophospholipase-like
Alfi_2558	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Alfi_2561	SSF100950	NagB/RpiA/CoA transferase-like
Alfi_2562	SSF100950	NagB/RpiA/CoA transferase-like
Alfi_2562	SSF102588	LmbE-like
Alfi_2563	SSF49344	CBD9-like
Alfi_2564	SSF56112	Protein kinase-like (PK-like)
Alfi_2565	SSF51182	RmlC-like cupins
Alfi_2566	SSF53067	Actin-like ATPase domain
Alfi_2567	SSF103473	MFS general substrate transporter
Alfi_2568	SSF56219	DNase I-like
Alfi_2569	SSF46689	Homeodomain-like
Alfi_2570	SSF53098	Ribonuclease H-like
Alfi_2573	SSF56935	Porins
Alfi_2577	SSF56925	OMPA-like
Alfi_2581	SSF48452	TPR-like
Alfi_2586	SSF81301	Nucleotidyltransferase
Alfi_2586	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Alfi_2590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_2591	SSF52743	Subtilisin-like
Alfi_2594	SSF48452	TPR-like
Alfi_2608	SSF56672	DNA/RNA polymerases
Alfi_2609	SSF51306	LexA/Signal peptidase
Alfi_2611	SSF56349	DNA breaking-rejoining enzymes
Alfi_2616	SSF48452	TPR-like
Alfi_2616	SSF50494	Trypsin-like serine proteases
Alfi_2617	SSF48452	TPR-like
Alfi_2617	SSF74653	TolA/TonB C-terminal domain
Alfi_2626	SSF56349	DNA breaking-rejoining enzymes
Alfi_2629	SSF49303	beta-Galactosidase/glucuronidase domain
Alfi_2629	SSF49785	Galactose-binding domain-like
Alfi_2629	SSF51445	(Trans)glycosidases
Alfi_2631	SSF52172	CheY-like
Alfi_2632	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_2633	SSF53098	Ribonuclease H-like
Alfi_2635	SSF56801	Acetyl-CoA synthetase-like
Alfi_2638	SSF102114	Radical SAM enzymes
Alfi_2639	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2641	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_2642	SSF103473	MFS general substrate transporter
Alfi_2644	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2645	SSF53187	Zn-dependent exopeptidases
Alfi_2645	SSF55031	Bacterial exopeptidase dimerisation domain
Alfi_2646	SSF111331	NAD kinase/diacylglycerol kinase-like
Alfi_2647	SSF54427	NTF2-like
Alfi_2649	SSF142906	YjbR-like
Alfi_2651	SSF56935	Porins
Alfi_2653	SSF103473	MFS general substrate transporter
Alfi_2654	SSF51658	Xylose isomerase-like
Alfi_2655	SSF53067	Actin-like ATPase domain
Alfi_2656	SSF46785	"Winged helix" DNA-binding domain
Alfi_2656	SSF55811	Nudix
Alfi_2657	SSF74650	Galactose mutarotase-like
Alfi_2658	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Alfi_2658	SSF52374	Nucleotidylyl transferase
Alfi_2659	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2659	SSF81271	TGS-like
Alfi_2660	SSF51445	(Trans)glycosidases
Alfi_2660	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
Alfi_2661	SSF46689	Homeodomain-like
Alfi_2661	SSF53822	Periplasmic binding protein-like I
Alfi_2662	SSF48208	Six-hairpin glycosidases
Alfi_2662	SSF56988	Anthrax protective antigen
Alfi_2663	SSF56219	DNase I-like
Alfi_2664	SSF51695	PLC-like phosphodiesterases
Alfi_2664	SSF53649	Alkaline phosphatase-like
Alfi_2665	SSF48208	Six-hairpin glycosidases
Alfi_2666	SSF56300	Metallo-dependent phosphatases
Alfi_2667	SSF53067	Actin-like ATPase domain
Alfi_2668	SSF51445	(Trans)glycosidases
Alfi_2668	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_2670	SSF53790	Tetrapyrrole methylase
Alfi_2673	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2674	SSF46689	Homeodomain-like
Alfi_2674	SSF55136	Probable bacterial effector-binding domain
Alfi_2675	SSF50715	Ribosomal protein L25-like
Alfi_2675	SSF52374	Nucleotidylyl transferase
Alfi_2677	SSF75217	alpha/beta knot
Alfi_2678	SSF51621	Phosphoenolpyruvate/pyruvate domain
Alfi_2679	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Alfi_2679	SSF54631	CBS-domain pair
Alfi_2681	SSF52317	Class I glutamine amidotransferase-like
Alfi_2681	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_2681	SSF54810	GMP synthetase C-terminal dimerisation domain
Alfi_2682	SSF103473	MFS general substrate transporter
Alfi_2683	SSF52266	SGNH hydrolase
Alfi_2684	SSF53098	Ribonuclease H-like
Alfi_2686	SSF52833	Thioredoxin-like
Alfi_2687	SSF54909	Dimeric alpha+beta barrel
Alfi_2688	SSF56349	DNA breaking-rejoining enzymes
Alfi_2692	SSF47729	IHF-like DNA-binding proteins
Alfi_2693	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_2694	SSF102114	Radical SAM enzymes
Alfi_2695	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_2699	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_2702	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2702	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_2705	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2706	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2718	SSF53187	Zn-dependent exopeptidases
Alfi_2723	SSF69349	Phage fibre proteins
Alfi_2724	SSF69349	Phage fibre proteins
Alfi_2726	SSF101960	Stabilizer of iron transporter SufD
Alfi_2727	SSF52218	Flavoproteins
Alfi_2728	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2729	SSF101960	Stabilizer of iron transporter SufD
Alfi_2730	SSF53383	PLP-dependent transferases
Alfi_2731	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2733	SSF111369	HlyD-like secretion proteins
Alfi_2734	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Alfi_2734	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Alfi_2734	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_2735	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_2736	SSF82784	OsmC-like
Alfi_2738	SSF48452	TPR-like
Alfi_2739	SSF56935	Porins
Alfi_2744	SSF55821	YrdC/RibB
Alfi_2746	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2749	SSF54060	His-Me finger endonucleases
Alfi_2750	SSF56219	DNase I-like
Alfi_2751	SSF49452	Starch-binding domain-like
Alfi_2751	SSF56935	Porins
Alfi_2753	SSF53649	Alkaline phosphatase-like
Alfi_2754	SSF63411	LuxS/MPP-like metallohydrolase
Alfi_2755	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2758	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_2759	SSF47240	Ferritin-like
Alfi_2760	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_2762	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2762	SSF51182	RmlC-like cupins
Alfi_2763	SSF103473	MFS general substrate transporter
Alfi_2764	SSF48452	TPR-like
Alfi_2765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2765	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Alfi_2766	SSF55469	FMN-dependent nitroreductase-like
Alfi_2767	SSF47446	Signal peptide-binding domain
Alfi_2767	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2770	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_2781	SSF48013	NusB-like
Alfi_2782	SSF160996	HI0933 insert domain-like
Alfi_2782	SSF51905	FAD/NAD(P)-binding domain
Alfi_2784	SSF89028	Cobalamin adenosyltransferase-like
Alfi_2786	SSF56300	Metallo-dependent phosphatases
Alfi_2788	SSF48452	TPR-like
Alfi_2789	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_2789	SSF56935	Porins
Alfi_2790	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_2792	SSF49785	Galactose-binding domain-like
Alfi_2792	SSF53474	alpha/beta-Hydrolases
Alfi_2793	SSF56317	Carbon-nitrogen hydrolase
Alfi_2794	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2797	SSF69765	IpsF-like
Alfi_2798	SSF53187	Zn-dependent exopeptidases
Alfi_2801	SSF56935	Porins
Alfi_2802	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2802	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Alfi_2804	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2805	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2805	SSF82051	Obg GTP-binding protein N-terminal domain
Alfi_2808	SSF55021	ACT-like
Alfi_2808	SSF56784	HAD-like
Alfi_2809	SSF50182	Sm-like ribonucleoproteins
Alfi_2809	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Alfi_2809	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Alfi_2812	SSF52335	Methylglyoxal synthase-like
Alfi_2813	SSF51395	FMN-linked oxidoreductases
Alfi_2814	SSF54631	CBS-domain pair
Alfi_2814	SSF56176	FAD-binding/transporter-associated domain-like
Alfi_2815	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Alfi_2815	SSF52374	Nucleotidylyl transferase
Alfi_2815	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Alfi_2816	SSF53098	Ribonuclease H-like
Alfi_2817	SSF46689	Homeodomain-like
Alfi_2817	SSF48295	TrpR-like
Alfi_2818	SSF56281	Metallo-hydrolase/oxidoreductase
Alfi_2819	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2822	SSF53271	PRTase-like
Alfi_2823	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2824	SSF56219	DNase I-like
Alfi_2825	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Alfi_2828	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2829	SSF50621	Alanine racemase C-terminal domain-like
Alfi_2829	SSF51419	PLP-binding barrel
Alfi_2831	SSF46689	Homeodomain-like
Alfi_2831	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2836	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_2838	SSF143597	YojJ-like
Alfi_2839	SSF111384	OmpH-like
Alfi_2840	SSF46929	DNA helicase RuvA subunit, C-terminal domain
Alfi_2840	SSF47781	RuvA domain 2-like
Alfi_2840	SSF50249	Nucleic acid-binding proteins
Alfi_2841	SSF54534	FKBP-like
Alfi_2842	SSF54534	FKBP-like
Alfi_2845	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Alfi_2845	SSF53067	Actin-like ATPase domain
Alfi_2846	SSF51445	(Trans)glycosidases
Alfi_2849	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_2851	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2852	SSF51717	Dihydropteroate synthetase-like
Alfi_2853	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2855	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_2857	SSF48371	ARM repeat
Alfi_2858	SSF52833	Thioredoxin-like
Alfi_2859	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2860	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_2862	SSF100950	NagB/RpiA/CoA transferase-like
Alfi_2863	SSF50156	PDZ domain-like
Alfi_2864	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2864	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_2864	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
Alfi_2865	SSF51261	Duplicated hybrid motif
Alfi_2866	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_2867	SSF56784	HAD-like
Alfi_2868	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2870	SSF51445	(Trans)glycosidases
Alfi_2872	SSF140478	LemA-like
Alfi_2873	SSF103481	Multidrug resistance efflux transporter EmrE
Alfi_2874	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_2874	SSF56935	Porins
Alfi_2875	SSF46955	Putative DNA-binding domain
Alfi_2875	SSF55136	Probable bacterial effector-binding domain
Alfi_2876	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Alfi_2877	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_2877	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_2877	SSF56719	Type II DNA topoisomerase
Alfi_2878	SSF56719	Type II DNA topoisomerase
Alfi_2879	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2880	SSF53681	Aspartate/glutamate racemase
Alfi_2881	SSF46785	"Winged helix" DNA-binding domain
Alfi_2881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2884	SSF101904	GyrA/ParC C-terminal domain-like
Alfi_2884	SSF56719	Type II DNA topoisomerase
Alfi_2885	SSF48452	TPR-like
Alfi_2886	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2888	SSF55120	Pseudouridine synthase
Alfi_2888	SSF55174	Alpha-L RNA-binding motif
Alfi_2891	SSF51569	Aldolase
Alfi_2892	SSF47781	RuvA domain 2-like
Alfi_2892	SSF50249	Nucleic acid-binding proteins
Alfi_2892	SSF52113	BRCT domain
Alfi_2892	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Alfi_2894	SSF52058	L domain-like
Alfi_2895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2896	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_2897	SSF52402	Adenine nucleotide alpha hydrolases-like
Alfi_2897	SSF52467	DHS-like NAD/FAD-binding domain
Alfi_2898	SSF158494	PG0775 C-terminal domain-like
Alfi_2898	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Alfi_2898	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Alfi_2899	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2900	SSF47413	lambda repressor-like DNA-binding domains
Alfi_2901	SSF56601	beta-lactamase/transpeptidase-like
Alfi_2903	SSF52833	Thioredoxin-like
Alfi_2904	SSF47240	Ferritin-like
Alfi_2904	SSF57802	Rubredoxin-like
Alfi_2907	SSF102405	MCP/YpsA-like
Alfi_2910	SSF53784	Phosphofructokinase
Alfi_2912	SSF50249	Nucleic acid-binding proteins
Alfi_2914	SSF102114	Radical SAM enzymes
Alfi_2919	SSF56784	HAD-like
Alfi_2920	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2921	SSF51395	FMN-linked oxidoreductases
Alfi_2924	SSF53383	PLP-dependent transferases
Alfi_2926	SSF47598	Ribbon-helix-helix
Alfi_2929	SSF52467	DHS-like NAD/FAD-binding domain
Alfi_2930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2931	SSF52833	Thioredoxin-like
Alfi_2932	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_2933	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Alfi_2934	SSF52096	ClpP/crotonase
Alfi_2936	SSF51230	Single hybrid motif
Alfi_2939	SSF52161	Ribosomal protein L13
Alfi_2940	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_2941	SSF52313	Ribosomal protein S2
Alfi_2942	SSF46934	UBA-like
Alfi_2942	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
Alfi_2944	SSF53795	PEP carboxykinase-like
Alfi_2945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2945	SSF90123	ABC transporter transmembrane region
Alfi_2946	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2946	SSF52980	Restriction endonuclease-like
Alfi_2948	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_2949	SSF56784	HAD-like
Alfi_2950	SSF51261	Duplicated hybrid motif
Alfi_2951	SSF51261	Duplicated hybrid motif
Alfi_2952	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Alfi_2952	SSF50447	Translation proteins
Alfi_2952	SSF55186	ThrRS/AlaRS common domain
Alfi_2952	SSF55681	Class II aaRS and biotin synthetases
Alfi_2953	SSF53649	Alkaline phosphatase-like
Alfi_2953	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Alfi_2955	SSF55826	YbaK/ProRS associated domain
Alfi_2956	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_2956	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Alfi_2957	SSF69572	Activating enzymes of the ubiquitin-like proteins
Alfi_2958	SSF51556	Metallo-dependent hydrolases
Alfi_2961	SSF57802	Rubredoxin-like
Alfi_2964	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Alfi_2964	SSF54292	2Fe-2S ferredoxin-like
Alfi_2964	SSF63380	Riboflavin synthase domain-like
Alfi_2967	SSF56784	HAD-like
Alfi_2968	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_2968	SSF56935	Porins
Alfi_2971	SSF51230	Single hybrid motif
Alfi_2971	SSF51569	Aldolase
Alfi_2971	SSF89000	post-HMGL domain-like
Alfi_2972	SSF81330	Gated mechanosensitive channel
Alfi_2973	SSF81324	Voltage-gated potassium channels
Alfi_2975	SSF101386	all-alpha NTP pyrophosphatases
Alfi_2975	SSF141734	HisI-like
Alfi_2976	SSF51366	Ribulose-phoshate binding barrel
Alfi_2977	SSF51366	Ribulose-phoshate binding barrel
Alfi_2978	SSF52317	Class I glutamine amidotransferase-like
Alfi_2979	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_2979	SSF56784	HAD-like
Alfi_2980	SSF53383	PLP-dependent transferases
Alfi_2981	SSF53720	ALDH-like
Alfi_2982	SSF53850	Periplasmic binding protein-like II
Alfi_2982	SSF54913	GlnB-like
Alfi_2983	SSF54862	4Fe-4S ferredoxins
Alfi_2986	SSF49265	Fibronectin type III
Alfi_2986	SSF53187	Zn-dependent exopeptidases
Alfi_2987	SSF89095	GatB/YqeY motif
Alfi_2988	SSF50156	PDZ domain-like
Alfi_2988	SSF50630	Acid proteases
Alfi_2991	SSF56784	HAD-like
Alfi_2992	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_2993	SSF55826	YbaK/ProRS associated domain
Alfi_2994	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_2995	SSF102114	Radical SAM enzymes
Alfi_2996	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_2997	SSF52266	SGNH hydrolase
Alfi_2999	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_3000	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_3002	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Alfi_3004	SSF54862	4Fe-4S ferredoxins
Alfi_3006	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3007	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3008	SSF51182	RmlC-like cupins
Alfi_3009	SSF53448	Nucleotide-diphospho-sugar transferases
Alfi_3011	SSF50104	Translation proteins SH3-like domain
Alfi_3011	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Alfi_3014	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3015	SSF103088	OmpA-like
Alfi_3015	SSF56925	OMPA-like
Alfi_3016	SSF50621	Alanine racemase C-terminal domain-like
Alfi_3016	SSF51419	PLP-binding barrel
Alfi_3017	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Alfi_3018	SSF56935	Porins
Alfi_3019	SSF101262	Methenyltetrahydrofolate cyclohydrolase-like
Alfi_3019	SSF55116	Formiminotransferase domain of formiminotransferase-cyclodeaminase.
Alfi_3020	SSF111326	Urocanase
Alfi_3021	SSF48557	L-aspartase-like
Alfi_3022	SSF51338	Composite domain of metallo-dependent hydrolases
Alfi_3022	SSF51556	Metallo-dependent hydrolases
Alfi_3023	SSF51316	Mss4-like
Alfi_3023	SSF55068	Peptide methionine sulfoxide reductase
Alfi_3024	SSF51161	Trimeric LpxA-like enzymes
Alfi_3028	SSF53383	PLP-dependent transferases
Alfi_3029	SSF51182	RmlC-like cupins
Alfi_3032	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_3035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3036	SSF52141	Uracil-DNA glycosylase-like
Alfi_3037	SSF48334	DNA repair protein MutS, domain III
Alfi_3037	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3037	SSF53150	DNA repair protein MutS, domain II
Alfi_3037	SSF55271	DNA repair protein MutS, domain I
Alfi_3038	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3039	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_3039	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_3039	SSF56719	Type II DNA topoisomerase
Alfi_3040	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3041	SSF47384	Homodimeric domain of signal transducing histidine kinase
Alfi_3041	SSF52172	CheY-like
Alfi_3041	SSF55781	GAF domain-like
Alfi_3041	SSF55785	PYP-like sensor domain (PAS domain)
Alfi_3041	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_3042	SSF56349	DNA breaking-rejoining enzymes
Alfi_3047	SSF50998	Quinoprotein alcohol dehydrogenase-like
Alfi_3047	SSF56300	Metallo-dependent phosphatases
Alfi_3048	SSF51246	Rudiment single hybrid motif
Alfi_3048	SSF52440	PreATP-grasp domain
Alfi_3048	SSF56059	Glutathione synthetase ATP-binding domain-like
Alfi_3049	SSF50891	Cyclophilin-like
Alfi_3050	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Alfi_3051	SSF53383	PLP-dependent transferases
Alfi_3052	SSF116726	TrkA C-terminal domain-like
Alfi_3055	SSF50037	C-terminal domain of transcriptional repressors
Alfi_3055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3056	SSF53649	Alkaline phosphatase-like
Alfi_3057	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_3058	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Alfi_3058	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Alfi_3058	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_3059	SSF111369	HlyD-like secretion proteins
Alfi_3061	SSF53649	Alkaline phosphatase-like
Alfi_3065	SSF52788	Phosphotyrosine protein phosphatases I
Alfi_3067	SSF52777	CoA-dependent acyltransferases
Alfi_3068	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3069	SSF53383	PLP-dependent transferases
Alfi_3071	SSF53474	alpha/beta-Hydrolases
Alfi_3072	SSF52794	PTS system IIB component-like
Alfi_3072	SSF55804	Phoshotransferase/anion transport protein
Alfi_3073	SSF55594	HPr-like
Alfi_3074	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Alfi_3074	SSF51621	Phosphoenolpyruvate/pyruvate domain
Alfi_3074	SSF52009	Phosphohistidine domain
Alfi_3075	SSF53474	alpha/beta-Hydrolases
Alfi_3077	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_3077	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_3078	SSF49265	Fibronectin type III
Alfi_3080	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_3080	SSF56935	Porins
Alfi_3081	SSF48452	TPR-like
Alfi_3082	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_3082	SSF56300	Metallo-dependent phosphatases
Alfi_3083	SSF51695	PLC-like phosphodiesterases
Alfi_3085	SSF48452	TPR-like
Alfi_3086	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_3086	SSF56935	Porins
Alfi_3088	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Alfi_3088	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Alfi_3089	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_3089	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3090	SSF51695	PLC-like phosphodiesterases
Alfi_3091	SSF103473	MFS general substrate transporter
Alfi_3092	SSF53697	SIS domain
Alfi_3092	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Alfi_3094	SSF56655	Carbohydrate phosphatase
Alfi_3095	SSF53187	Zn-dependent exopeptidases
Alfi_3097	SSF53738	Phosphoglucomutase, first 3 domains
Alfi_3097	SSF55957	Phosphoglucomutase, C-terminal domain
Alfi_3098	SSF53167	Purine and uridine phosphorylases
Alfi_3099	SSF55979	DNA clamp
Alfi_3100	SSF53098	Ribonuclease H-like
Alfi_3101	SSF53822	Periplasmic binding protein-like I
Alfi_3101	SSF54106	LysM domain
Alfi_3102	SSF46785	"Winged helix" DNA-binding domain
Alfi_3102	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3103	SSF52374	Nucleotidylyl transferase
Alfi_3104	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Alfi_3105	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_3105	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Alfi_3106	SSF55469	FMN-dependent nitroreductase-like
Alfi_3109	SSF56349	DNA breaking-rejoining enzymes
Alfi_3112	SSF46689	Homeodomain-like
Alfi_3113	SSF53098	Ribonuclease H-like
Alfi_3118	SSF56935	Porins
Alfi_3121	SSF46894	C-terminal effector domain of the bipartite response regulators
Alfi_3125	SSF47598	Ribbon-helix-helix
Alfi_3131	SSF46955	Putative DNA-binding domain
Alfi_3132	SSF46955	Putative DNA-binding domain
Alfi_3135	SSF56349	DNA breaking-rejoining enzymes
Alfi_3136	SSF56925	OMPA-like
Alfi_3142	SSF74650	Galactose mutarotase-like
Alfi_3143	SSF52833	Thioredoxin-like
Alfi_3144	SSF47781	RuvA domain 2-like
Alfi_3144	SSF89550	PHP domain-like
Alfi_3145	SSF54913	GlnB-like
Alfi_3146	SSF74653	TolA/TonB C-terminal domain
Alfi_3147	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3147	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Alfi_3150	SSF50156	PDZ domain-like
Alfi_3150	SSF52096	ClpP/crotonase
Alfi_3151	SSF52954	Class II aaRS ABD-related
Alfi_3151	SSF55681	Class II aaRS and biotin synthetases
Alfi_3152	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3153	SSF47240	Ferritin-like
Alfi_3153	SSF57802	Rubredoxin-like
Alfi_3154	SSF56300	Metallo-dependent phosphatases
Alfi_3155	SSF103481	Multidrug resistance efflux transporter EmrE
Alfi_3158	SSF56935	Porins
Alfi_3159	SSF56300	Metallo-dependent phosphatases
Alfi_3160	SSF53597	Dihydrofolate reductase-like
Alfi_3160	SSF53927	Cytidine deaminase-like
Alfi_3161	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_3162	SSF111369	HlyD-like secretion proteins
Alfi_3165	SSF49452	Starch-binding domain-like
Alfi_3165	SSF56935	Porins
Alfi_3167	SSF52172	CheY-like
Alfi_3169	SSF51161	Trimeric LpxA-like enzymes
Alfi_3170	SSF101386	all-alpha NTP pyrophosphatases
Alfi_3171	SSF51445	(Trans)glycosidases
Alfi_3171	SSF55545	beta-N-acetylhexosaminidase-like domain
Alfi_3172	SSF52980	Restriction endonuclease-like
Alfi_3174	SSF46955	Putative DNA-binding domain
Alfi_3174	SSF50249	Nucleic acid-binding proteins
Alfi_3174	SSF54991	Anticodon-binding domain of PheRS
Alfi_3174	SSF55681	Class II aaRS and biotin synthetases
Alfi_3174	SSF56037	PheT/TilS domain
Alfi_3176	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Alfi_3177	SSF103481	Multidrug resistance efflux transporter EmrE
Alfi_3178	SSF50621	Alanine racemase C-terminal domain-like
Alfi_3178	SSF51419	PLP-binding barrel
Alfi_3180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3180	SSF54980	EF-G C-terminal domain-like
Alfi_3181	SSF56801	Acetyl-CoA synthetase-like
Alfi_3184	SSF56349	DNA breaking-rejoining enzymes
Alfi_3186	SSF103088	OmpA-like
Alfi_3191	SSF51695	PLC-like phosphodiesterases
Alfi_3192	SSF50249	Nucleic acid-binding proteins
Alfi_3192	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3193	SSF48537	Phospholipase C/P1 nuclease
Alfi_3200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3204	SSF49464	Carboxypeptidase regulatory domain-like
Alfi_3204	SSF56935	Porins
Alfi_3205	SSF52218	Flavoproteins
Alfi_3206	SSF160448	PG1857-like
Alfi_3211	SSF56672	DNA/RNA polymerases
Alfi_3213	SSF53098	Ribonuclease H-like
Alfi_3214	SSF46689	Homeodomain-like
Alfi_3216	SSF56349	DNA breaking-rejoining enzymes
Alfi_3218	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3219	SSF159941	MM3350-like
Alfi_3220	SSF53720	ALDH-like
Alfi_3221	SSF55469	FMN-dependent nitroreductase-like
Alfi_3223	SSF47413	lambda repressor-like DNA-binding domains
Alfi_3227	SSF48452	TPR-like
Alfi_3230	SSF69635	Type III secretory system chaperone-like
Alfi_3231	SSF50494	Trypsin-like serine proteases
Alfi_3231	SSF69635	Type III secretory system chaperone-like
Alfi_3234	SSF52218	Flavoproteins
Alfi_3235	SSF52218	Flavoproteins
Alfi_3236	SSF51182	RmlC-like cupins
Alfi_3236	SSF69118	AhpD-like
Alfi_3237	SSF51430	NAD(P)-linked oxidoreductase
Alfi_3238	SSF46689	Homeodomain-like
Alfi_3239	SSF53254	Phosphoglycerate mutase-like
Alfi_3240	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3240	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Alfi_3241	SSF51569	Aldolase
Alfi_3242	SSF46689	Homeodomain-like
Alfi_3243	SSF111369	HlyD-like secretion proteins
Alfi_3244	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Alfi_3244	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Alfi_3244	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Alfi_3245	SSF56954	Outer membrane efflux proteins (OEP)
Alfi_3246	SSF46689	Homeodomain-like
Alfi_3249	SSF53383	PLP-dependent transferases
Alfi_3250	SSF53474	alpha/beta-Hydrolases
Alfi_3251	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3251	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_3253	SSF103473	MFS general substrate transporter
Alfi_3262	SSF102114	Radical SAM enzymes
Alfi_3263	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Alfi_3265	SSF142695	RibA-like
Alfi_3265	SSF55821	YrdC/RibB
Alfi_3266	SSF50486	FMT C-terminal domain-like
Alfi_3266	SSF53328	Formyltransferase
Alfi_3267	SSF52833	Thioredoxin-like
Alfi_3269	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Alfi_3270	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_3271	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Alfi_3271	SSF52922	TK C-terminal domain-like
Alfi_3272	SSF54862	4Fe-4S ferredoxins
Alfi_3274	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3274	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Alfi_3275	SSF53383	PLP-dependent transferases
Alfi_3277	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3278	SSF48452	TPR-like
Alfi_3278	SSF52374	Nucleotidylyl transferase
Alfi_3279	SSF52440	PreATP-grasp domain
Alfi_3279	SSF56059	Glutathione synthetase ATP-binding domain-like
Alfi_3281	SSF51261	Duplicated hybrid motif
Alfi_3281	SSF54106	LysM domain
Alfi_3282	SSF53590	Nucleoside hydrolase
Alfi_3284	SSF53613	Ribokinase-like
Alfi_3286	SSF47413	lambda repressor-like DNA-binding domains
Alfi_3286	SSF53822	Periplasmic binding protein-like I
Alfi_3287	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Alfi_3287	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3288	SSF51419	PLP-binding barrel
Alfi_3291	SSF51905	FAD/NAD(P)-binding domain
Alfi_3291	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Alfi_3293	SSF55120	Pseudouridine synthase
Alfi_3294	SSF48557	L-aspartase-like
Alfi_3295	SSF51735	NAD(P)-binding Rossmann-fold domains
Alfi_3295	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Alfi_3296	SSF51306	LexA/Signal peptidase
Alfi_3297	SSF54211	Ribosomal protein S5 domain 2-like
Alfi_3298	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Alfi_3299	SSF63411	LuxS/MPP-like metallohydrolase
Alfi_3300	SSF52317	Class I glutamine amidotransferase-like
Alfi_3301	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Alfi_3302	SSF101386	all-alpha NTP pyrophosphatases
Alfi_3304	SSF53738	Phosphoglucomutase, first 3 domains
Alfi_3304	SSF55957	Phosphoglucomutase, C-terminal domain