YYU_00005	SSF47807	5' to 3' exonuclease, C-terminal subdomain
YYU_00005	SSF53098	Ribonuclease H-like
YYU_00005	SSF56672	DNA/RNA polymerases
YYU_00005	SSF88723	PIN domain-like
YYU_00010	SSF51366	Ribulose-phoshate binding barrel
YYU_00020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00035	SSF52317	Class I glutamine amidotransferase-like
YYU_00040	SSF55973	S-adenosylmethionine synthetase
YYU_00050	SSF51905	FAD/NAD(P)-binding domain
YYU_00065	SSF55681	Class II aaRS and biotin synthetases
YYU_00070	SSF109604	HD-domain/PDEase-like
YYU_00075	SSF46565	Chaperone J-domain
YYU_00075	SSF49493	HSP40/DnaJ peptide-binding domain
YYU_00075	SSF57938	DnaJ/Hsp40 cysteine-rich domain
YYU_00080	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
YYU_00080	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
YYU_00090	SSF53098	Ribonuclease H-like
YYU_00095	SSF81452	Cytochrome c oxidase subunit III-like
YYU_00100	SSF51726	UROD/MetE-like
YYU_00105	SSF54631	CBS-domain pair
YYU_00105	SSF56176	FAD-binding/transporter-associated domain-like
YYU_00110	SSF50789	Herpes virus serine proteinase, assemblin
YYU_00120	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_00125	SSF142754	NadA-like
YYU_00130	SSF54862	4Fe-4S ferredoxins
YYU_00165	SSF52374	Nucleotidylyl transferase
YYU_00170	SSF51064	Head domain of nucleotide exchange factor GrpE
YYU_00170	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
YYU_00175	SSF53597	Dihydrofolate reductase-like
YYU_00175	SSF53927	Cytidine deaminase-like
YYU_00180	SSF52317	Class I glutamine amidotransferase-like
YYU_00180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00190	SSF56349	DNA breaking-rejoining enzymes
YYU_00195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00200	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_00200	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YYU_00200	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YYU_00250	SSF53850	Periplasmic binding protein-like II
YYU_00255	SSF158997	Trm112p-like
YYU_00260	SSF103473	MFS general substrate transporter
YYU_00265	SSF54565	Ribosomal protein S16
YYU_00280	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_00285	SSF55973	S-adenosylmethionine synthetase
YYU_00295	SSF46589	tRNA-binding arm
YYU_00295	SSF55681	Class II aaRS and biotin synthetases
YYU_00300	SSF74731	Ribosomal protein L20
YYU_00305	SSF143034	L35p-like
YYU_00315	SSF50249	Nucleic acid-binding proteins
YYU_00315	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00315	SSF68912	Rho N-terminal domain-like
YYU_00320	SSF51905	FAD/NAD(P)-binding domain
YYU_00320	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YYU_00325	SSF46565	Chaperone J-domain
YYU_00330	SSF110836	Hypothetical protein SAV1430
YYU_00330	SSF117916	Fe-S cluster assembly (FSCA) domain-like
YYU_00340	SSF54285	MoaD/ThiS
YYU_00345	SSF110399	ThiG-like
YYU_00355	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
YYU_00355	SSF52374	Nucleotidylyl transferase
YYU_00370	SSF109998	Triger factor/SurA peptide-binding domain-like
YYU_00375	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_00395	SSF116842	XseB-like
YYU_00400	SSF52833	Thioredoxin-like
YYU_00410	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YYU_00415	SSF53474	alpha/beta-Hydrolases
YYU_00430	SSF53328	Formyltransferase
YYU_00435	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YYU_00435	SSF54631	CBS-domain pair
YYU_00440	SSF111331	NAD kinase/diacylglycerol kinase-like
YYU_00445	SSF143800	L28p-like
YYU_00455	SSF52151	FabD/lysophospholipase-like
YYU_00455	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
YYU_00460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00465	SSF103473	MFS general substrate transporter
YYU_00475	SSF54427	NTF2-like
YYU_00480	SSF54611	SecB-like
YYU_00485	SSF52833	Thioredoxin-like
YYU_00495	SSF63411	LuxS/MPP-like metallohydrolase
YYU_00505	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YYU_00510	SSF53633	Carbamate kinase-like
YYU_00525	SSF63380	Riboflavin synthase domain-like
YYU_00540	SSF141259	CarD-like
YYU_00540	SSF143517	TRCF domain-like
YYU_00540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00550	SSF53098	Ribonuclease H-like
YYU_00565	SSF53633	Carbamate kinase-like
YYU_00570	SSF55194	Ribosome recycling factor, RRF
YYU_00605	SSF56104	SAICAR synthase-like
YYU_00610	SSF52954	Class II aaRS ABD-related
YYU_00610	SSF55681	Class II aaRS and biotin synthetases
YYU_00615	SSF52833	Thioredoxin-like
YYU_00630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00640	SSF55307	Tubulin C-terminal domain-like
YYU_00645	SSF51283	dUTPase-like
YYU_00675	SSF50249	Nucleic acid-binding proteins
YYU_00680	SSF47384	Homodimeric domain of signal transducing histidine kinase
YYU_00680	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYU_00685	SSF47819	HRDC-like
YYU_00685	SSF53098	Ribonuclease H-like
YYU_00690	SSF47781	RuvA domain 2-like
YYU_00690	SSF50249	Nucleic acid-binding proteins
YYU_00690	SSF52113	BRCT domain
YYU_00690	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
YYU_00695	SSF52833	Thioredoxin-like
YYU_00700	SSF82657	BolA-like
YYU_00705	SSF52833	Thioredoxin-like
YYU_00710	SSF56925	OMPA-like
YYU_00725	SSF56925	OMPA-like
YYU_00730	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00745	SSF54995	Ribosomal protein S6
YYU_00750	SSF46911	Ribosomal protein S18
YYU_00755	SSF55653	Ribosomal protein L9 C-domain
YYU_00755	SSF55658	L9 N-domain-like
YYU_00760	SSF53383	PLP-dependent transferases
YYU_00765	SSF55387	Frataxin/Nqo15-like
YYU_00770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00770	SSF90123	ABC transporter transmembrane region
YYU_00775	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YYU_00775	SSF51905	FAD/NAD(P)-binding domain
YYU_00775	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YYU_00780	SSF46548	alpha-helical ferredoxin
YYU_00780	SSF54292	2Fe-2S ferredoxin-like
YYU_00790	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
YYU_00790	SSF51905	FAD/NAD(P)-binding domain
YYU_00790	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
YYU_00795	SSF46548	alpha-helical ferredoxin
YYU_00795	SSF54292	2Fe-2S ferredoxin-like
YYU_00800	SSF69796	Thymidylate synthase-complementing protein Thy1
YYU_00805	SSF103473	MFS general substrate transporter
YYU_00815	SSF55681	Class II aaRS and biotin synthetases
YYU_00825	SSF46785	"Winged helix" DNA-binding domain
YYU_00825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00830	SSF46929	DNA helicase RuvA subunit, C-terminal domain
YYU_00830	SSF47781	RuvA domain 2-like
YYU_00830	SSF50249	Nucleic acid-binding proteins
YYU_00840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00845	SSF56925	OMPA-like
YYU_00855	SSF56925	OMPA-like
YYU_00860	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_00860	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YYU_00875	SSF53474	alpha/beta-Hydrolases
YYU_00880	SSF53474	alpha/beta-Hydrolases
YYU_00885	SSF46626	Cytochrome c
YYU_00895	SSF51621	Phosphoenolpyruvate/pyruvate domain
YYU_00895	SSF52009	Phosphohistidine domain
YYU_00895	SSF56059	Glutathione synthetase ATP-binding domain-like
YYU_00905	SSF56784	HAD-like
YYU_00920	SSF50249	Nucleic acid-binding proteins
YYU_00920	SSF55261	GAD domain-like
YYU_00920	SSF55681	Class II aaRS and biotin synthetases
YYU_00930	SSF52440	PreATP-grasp domain
YYU_00930	SSF56059	Glutathione synthetase ATP-binding domain-like
YYU_00945	SSF46689	Homeodomain-like
YYU_00945	SSF52172	CheY-like
YYU_00945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_00955	SSF52172	CheY-like
YYU_00960	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YYU_00960	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_00965	SSF56349	DNA breaking-rejoining enzymes
YYU_00975	SSF55326	PurM N-terminal domain-like
YYU_00975	SSF56042	PurM C-terminal domain-like
YYU_00990	SSF55326	PurM N-terminal domain-like
YYU_00995	SSF55073	Nucleotide cyclase
YYU_01000	SSF81301	Nucleotidyltransferase
YYU_01005	SSF48452	TPR-like
YYU_01015	SSF55326	PurM N-terminal domain-like
YYU_01015	SSF56042	PurM C-terminal domain-like
YYU_01025	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
YYU_01030	SSF55326	PurM N-terminal domain-like
YYU_01030	SSF56042	PurM C-terminal domain-like
YYU_01040	SSF51126	Pectin lyase-like
YYU_01050	SSF102114	Radical SAM enzymes
YYU_01065	SSF51261	Duplicated hybrid motif
YYU_01070	SSF56655	Carbohydrate phosphatase
YYU_01075	SSF51905	FAD/NAD(P)-binding domain
YYU_01080	SSF52317	Class I glutamine amidotransferase-like
YYU_01115	SSF53328	Formyltransferase
YYU_01120	SSF52949	Macro domain-like
YYU_01120	SSF53187	Zn-dependent exopeptidases
YYU_01125	SSF49482	Aromatic compound dioxygenase
YYU_01140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01140	SSF81923	Double Clp-N motif
YYU_01145	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_01160	SSF48592	GroEL equatorial domain-like
YYU_01160	SSF52029	GroEL apical domain-like
YYU_01160	SSF54849	GroEL-intermediate domain like
YYU_01165	SSF50129	GroES-like
YYU_01170	SSF102712	JAB1/MPN domain
YYU_01170	SSF47781	RuvA domain 2-like
YYU_01175	SSF55681	Class II aaRS and biotin synthetases
YYU_01180	SSF51338	Composite domain of metallo-dependent hydrolases
YYU_01180	SSF51556	Metallo-dependent hydrolases
YYU_01185	SSF102645	CoaB-like
YYU_01190	SSF48557	L-aspartase-like
YYU_01200	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
YYU_01200	SSF52335	Methylglyoxal synthase-like
YYU_01200	SSF52440	PreATP-grasp domain
YYU_01200	SSF56059	Glutathione synthetase ATP-binding domain-like
YYU_01205	SSF55821	YrdC/RibB
YYU_01210	SSF51717	Dihydropteroate synthetase-like
YYU_01220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01220	SSF90123	ABC transporter transmembrane region
YYU_01225	SSF50129	GroES-like
YYU_01225	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_01230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01235	SSF48403	Ankyrin repeat
YYU_01240	SSF117892	Band 7/SPFH domain
YYU_01250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01255	SSF53800	Chelatase
YYU_01265	SSF102829	Cell division protein ZapA-like
YYU_01275	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YYU_01285	SSF47729	IHF-like DNA-binding proteins
YYU_01290	SSF52096	ClpP/crotonase
YYU_01295	SSF50249	Nucleic acid-binding proteins
YYU_01300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01305	SSF55315	L30e-like
YYU_01305	SSF75217	alpha/beta knot
YYU_01320	SSF50447	Translation proteins
YYU_01320	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YYU_01320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01325	SSF54999	Ribosomal protein S10
YYU_01330	SSF50447	Translation proteins
YYU_01335	SSF52166	Ribosomal protein L4
YYU_01340	SSF54189	Ribosomal proteins S24e, L23 and L15e
YYU_01345	SSF50104	Translation proteins SH3-like domain
YYU_01345	SSF50249	Nucleic acid-binding proteins
YYU_01350	SSF54570	Ribosomal protein S19
YYU_01355	SSF54843	Ribosomal protein L22
YYU_01360	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YYU_01360	SSF54821	Ribosomal protein S3 C-terminal domain
YYU_01365	SSF54686	Ribosomal protein L16p/L10e
YYU_01370	SSF46561	Ribosomal protein L29 (L29p)
YYU_01375	SSF50249	Nucleic acid-binding proteins
YYU_01380	SSF50193	Ribosomal protein L14
YYU_01385	SSF50104	Translation proteins SH3-like domain
YYU_01390	SSF55282	RL5-like
YYU_01395	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YYU_01400	SSF56047	Ribosomal protein S8
YYU_01405	SSF56053	Ribosomal protein L6
YYU_01410	SSF53137	Translational machinery components
YYU_01415	SSF54211	Ribosomal protein S5 domain 2-like
YYU_01415	SSF54768	dsRNA-binding domain-like
YYU_01420	SSF52080	Ribosomal proteins L15p and L18e
YYU_01425	SSF103491	Preprotein translocase SecY subunit
YYU_01430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01435	SSF46946	S13-like H2TH domain
YYU_01440	SSF53137	Translational machinery components
YYU_01445	SSF47789	C-terminal domain of RNA polymerase alpha subunit
YYU_01445	SSF55257	RBP11-like subunits of RNA polymerase
YYU_01445	SSF56553	Insert subdomain of RNA polymerase alpha subunit
YYU_01450	SSF64263	Prokaryotic ribosomal protein L17
YYU_01455	SSF46955	Putative DNA-binding domain
YYU_01455	SSF50249	Nucleic acid-binding proteins
YYU_01455	SSF54991	Anticodon-binding domain of PheRS
YYU_01455	SSF55681	Class II aaRS and biotin synthetases
YYU_01455	SSF56037	PheT/TilS domain
YYU_01470	SSF54211	Ribosomal protein S5 domain 2-like
YYU_01485	SSF50475	FMN-binding split barrel
YYU_01495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01500	SSF51713	tRNA-guanine transglycosylase
YYU_01505	SSF57829	Zn-binding ribosomal proteins
YYU_01510	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YYU_01515	SSF53901	Thiolase-like
YYU_01530	SSF53927	Cytidine deaminase-like
YYU_01540	SSF48024	N-terminal domain of DnaB helicase
YYU_01540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01545	SSF51905	FAD/NAD(P)-binding domain
YYU_01550	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YYU_01560	SSF54534	FKBP-like
YYU_01565	SSF48576	Terpenoid synthases
YYU_01575	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
YYU_01575	SSF51998	PFL-like glycyl radical enzymes
YYU_01580	SSF53098	Ribonuclease H-like
YYU_01595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01605	SSF103088	OmpA-like
YYU_01610	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYU_01615	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YYU_01615	SSF52922	TK C-terminal domain-like
YYU_01645	SSF50249	Nucleic acid-binding proteins
YYU_01650	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YYU_01650	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
YYU_01650	SSF53067	Actin-like ATPase domain
YYU_01655	SSF55961	Bet v1-like
YYU_01665	SSF47364	Domain of the SRP/SRP receptor G-proteins
YYU_01665	SSF47446	Signal peptide-binding domain
YYU_01665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01670	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YYU_01675	SSF53098	Ribonuclease H-like
YYU_01690	SSF50630	Acid proteases
YYU_01695	SSF53092	Creatinase/prolidase N-terminal domain
YYU_01695	SSF55920	Creatinase/aminopeptidase
YYU_01700	SSF69618	HemD-like
YYU_01705	SSF52317	Class I glutamine amidotransferase-like
YYU_01710	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01720	SSF143800	L28p-like
YYU_01735	SSF55120	Pseudouridine synthase
YYU_01735	SSF55174	Alpha-L RNA-binding motif
YYU_01745	SSF51230	Single hybrid motif
YYU_01745	SSF51246	Rudiment single hybrid motif
YYU_01745	SSF52440	PreATP-grasp domain
YYU_01745	SSF56059	Glutathione synthetase ATP-binding domain-like
YYU_01760	SSF102114	Radical SAM enzymes
YYU_01780	SSF161098	MetI-like
YYU_01785	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
YYU_01785	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
YYU_01795	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01825	SSF51283	dUTPase-like
YYU_01840	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
YYU_01840	SSF52317	Class I glutamine amidotransferase-like
YYU_01880	SSF53649	Alkaline phosphatase-like
YYU_01880	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
YYU_01885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_01895	SSF50998	Quinoprotein alcohol dehydrogenase-like
YYU_01900	SSF51905	FAD/NAD(P)-binding domain
YYU_01900	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YYU_01905	SSF111369	HlyD-like secretion proteins
YYU_01910	SSF50249	Nucleic acid-binding proteins
YYU_01915	SSF52972	ITPase-like
YYU_01920	SSF52313	Ribosomal protein S2
YYU_01925	SSF46934	UBA-like
YYU_01925	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
YYU_01940	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
YYU_01950	SSF50022	ISP domain
YYU_01955	SSF81342	Transmembrane di-heme cytochromes
YYU_01955	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
YYU_01960	SSF46626	Cytochrome c
YYU_01975	SSF56935	Porins
YYU_01980	SSF56935	Porins
YYU_01995	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
YYU_01995	SSF52374	Nucleotidylyl transferase
YYU_02005	SSF46946	S13-like H2TH domain
YYU_02005	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YYU_02005	SSF81624	N-terminal domain of MutM-like DNA repair proteins
YYU_02010	SSF51905	FAD/NAD(P)-binding domain
YYU_02025	SSF52096	ClpP/crotonase
YYU_02035	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02040	SSF75620	Release factor
YYU_02050	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02055	SSF53633	Carbamate kinase-like
YYU_02060	SSF102886	Coproporphyrinogen III oxidase
YYU_02065	SSF118215	Proton glutamate symport protein
YYU_02075	SSF46589	tRNA-binding arm
YYU_02075	SSF55681	Class II aaRS and biotin synthetases
YYU_02085	SSF54427	NTF2-like
YYU_02090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02100	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
YYU_02105	SSF140490	Nqo1C-terminal domain-like
YYU_02105	SSF142019	Nqo1 FMN-binding domain-like
YYU_02105	SSF142984	Nqo1 middle domain-like
YYU_02145	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_02145	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYU_02145	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
YYU_02165	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
YYU_02165	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
YYU_02165	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YYU_02170	SSF47794	Rad51 N-terminal domain-like
YYU_02170	SSF50249	Nucleic acid-binding proteins
YYU_02170	SSF54814	Prokaryotic type KH domain (KH-domain type II)
YYU_02170	SSF69705	Transcription factor NusA, N-terminal domain
YYU_02175	SSF50447	Translation proteins
YYU_02175	SSF52156	Initiation factor IF2/eIF5b, domain 3
YYU_02175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02180	SSF89919	Ribosome-binding factor A, RbfA
YYU_02185	SSF50447	Translation proteins
YYU_02195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02195	SSF81923	Double Clp-N motif
YYU_02200	SSF50447	Translation proteins
YYU_02200	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02200	SSF54980	EF-G C-terminal domain-like
YYU_02260	SSF89095	GatB/YqeY motif
YYU_02270	SSF75620	Release factor
YYU_02285	SSF50249	Nucleic acid-binding proteins
YYU_02290	SSF75620	Release factor
YYU_02300	SSF55931	Glutamine synthetase/guanido kinase
YYU_02300	SSF89095	GatB/YqeY motif
YYU_02305	SSF56219	DNase I-like
YYU_02315	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_02320	SSF48295	TrpR-like
YYU_02320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02345	SSF89095	GatB/YqeY motif
YYU_02355	SSF75620	Release factor
YYU_02360	SSF75625	YebC-like
YYU_02370	SSF53383	PLP-dependent transferases
YYU_02405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02410	SSF51569	Aldolase
YYU_02415	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
YYU_02420	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YYU_02420	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YYU_02420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02430	SSF158791	MgtE N-terminal domain-like
YYU_02430	SSF161093	MgtE membrane domain-like
YYU_02430	SSF54631	CBS-domain pair
YYU_02440	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_02450	SSF55120	Pseudouridine synthase
YYU_02455	SSF53671	Aspartate/ornithine carbamoyltransferase
YYU_02460	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_02465	SSF56219	DNase I-like
YYU_02475	SSF57840	Ribosomal protein L36
YYU_02485	SSF143243	Nqo5-like
YYU_02490	SSF160443	SMR domain-like
YYU_02495	SSF63562	RPB6/omega subunit-like
YYU_02500	SSF47413	lambda repressor-like DNA-binding domains
YYU_02515	SSF56770	HydA/Nqo6-like
YYU_02520	SSF143243	Nqo5-like
YYU_02530	SSF64167	SurE-like
YYU_02540	SSF82093	Heme chaperone CcmE
YYU_02545	SSF51366	Ribulose-phoshate binding barrel
YYU_02550	SSF51556	Metallo-dependent hydrolases
YYU_02560	SSF51556	Metallo-dependent hydrolases
YYU_02570	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYU_02570	SSF50677	ValRS/IleRS/LeuRS editing domain
YYU_02570	SSF52374	Nucleotidylyl transferase
YYU_02595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02600	SSF48013	NusB-like
YYU_02605	SSF52121	Lumazine synthase
YYU_02620	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YYU_02635	SSF51971	Nucleotide-binding domain
YYU_02635	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
YYU_02635	SSF63380	Riboflavin synthase domain-like
YYU_02645	SSF50104	Translation proteins SH3-like domain
YYU_02645	SSF50249	Nucleic acid-binding proteins
YYU_02650	SSF56655	Carbohydrate phosphatase
YYU_02655	SSF55120	Pseudouridine synthase
YYU_02655	SSF55174	Alpha-L RNA-binding motif
YYU_02660	SSF52172	CheY-like
YYU_02660	SSF55073	Nucleotide cyclase
YYU_02670	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_02670	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
YYU_02685	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYU_02685	SSF52374	Nucleotidylyl transferase
YYU_02695	SSF47240	Ferritin-like
YYU_02700	SSF52833	Thioredoxin-like
YYU_02715	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_02740	SSF56731	DNA primase core
YYU_02740	SSF57783	Zinc beta-ribbon
YYU_02745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_02755	SSF54211	Ribosomal protein S5 domain 2-like
YYU_02755	SSF55060	GHMP Kinase, C-terminal domain
YYU_02760	SSF51395	FMN-linked oxidoreductases
YYU_02765	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YYU_02765	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YYU_02780	SSF63411	LuxS/MPP-like metallohydrolase
YYU_02785	SSF54913	GlnB-like
YYU_02790	SSF47384	Homodimeric domain of signal transducing histidine kinase
YYU_02790	SSF52172	CheY-like
YYU_02790	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYU_02795	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_02815	SSF53613	Ribokinase-like
YYU_02815	SSF64153	YjeF N-terminal domain-like
YYU_02830	SSF118215	Proton glutamate symport protein
YYU_02845	SSF56712	Prokaryotic type I DNA topoisomerase
YYU_02845	SSF57783	Zinc beta-ribbon
YYU_02880	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_02885	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
YYU_02885	SSF52374	Nucleotidylyl transferase
YYU_02895	SSF109998	Triger factor/SurA peptide-binding domain-like
YYU_02895	SSF54534	FKBP-like
YYU_02905	SSF53067	Actin-like ATPase domain
YYU_02910	SSF118215	Proton glutamate symport protein
YYU_02915	SSF118215	Proton glutamate symport protein
YYU_02955	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_02965	SSF51351	Triosephosphate isomerase (TIM)
YYU_02970	SSF53850	Periplasmic binding protein-like II
YYU_02975	SSF53067	Actin-like ATPase domain
YYU_02985	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YYU_02990	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_02990	SSF56327	LDH C-terminal domain-like
YYU_03055	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
YYU_03065	SSF53067	Actin-like ATPase domain
YYU_03070	SSF56214	4'-phosphopantetheinyl transferase
YYU_03075	SSF52954	Class II aaRS ABD-related
YYU_03075	SSF55681	Class II aaRS and biotin synthetases
YYU_03080	SSF52317	Class I glutamine amidotransferase-like
YYU_03090	SSF52374	Nucleotidylyl transferase
YYU_03095	SSF52374	Nucleotidylyl transferase
YYU_03130	SSF51905	FAD/NAD(P)-binding domain
YYU_03135	SSF52833	Thioredoxin-like
YYU_03140	SSF53383	PLP-dependent transferases
YYU_03145	SSF56925	OMPA-like
YYU_03150	SSF56925	OMPA-like
YYU_03155	SSF56925	OMPA-like
YYU_03170	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_03175	SSF51730	FAD-linked oxidoreductase
YYU_03175	SSF53720	ALDH-like
YYU_03175	SSF81935	N-terminal domain of bifunctional PutA protein
YYU_03185	SSF53474	alpha/beta-Hydrolases
YYU_03190	SSF46785	"Winged helix" DNA-binding domain
YYU_03190	SSF53383	PLP-dependent transferases
YYU_03195	SSF53383	PLP-dependent transferases
YYU_03200	SSF82649	SufE/NifU
YYU_03205	SSF89360	HesB-like domain
YYU_03210	SSF46565	Chaperone J-domain
YYU_03215	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
YYU_03215	SSF53067	Actin-like ATPase domain
YYU_03220	SSF54292	2Fe-2S ferredoxin-like
YYU_03240	SSF51445	(Trans)glycosidases
YYU_03275	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_03275	SSF81799	Putative methyltransferase TM0872, insert domain
YYU_03290	SSF100950	NagB/RpiA/CoA transferase-like
YYU_03295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_03295	SSF82051	Obg GTP-binding protein N-terminal domain
YYU_03300	SSF51604	Enolase C-terminal domain-like
YYU_03300	SSF54826	Enolase N-terminal domain-like
YYU_03310	SSF141091	L21p-like
YYU_03315	SSF110324	Ribosomal L27 protein-like
YYU_03325	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYU_03325	SSF52374	Nucleotidylyl transferase
YYU_03325	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
YYU_03335	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YYU_03340	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YYU_03345	SSF52943	ATP synthase (F1-ATPase), gamma subunit
YYU_03355	SSF48403	Ankyrin repeat
YYU_03365	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
YYU_03365	SSF54292	2Fe-2S ferredoxin-like
YYU_03365	SSF54862	4Fe-4S ferredoxins
YYU_03380	SSF54211	Ribosomal protein S5 domain 2-like
YYU_03380	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYU_03380	SSF56719	Type II DNA topoisomerase
YYU_03440	SSF53098	Ribonuclease H-like
YYU_03445	SSF52833	Thioredoxin-like
YYU_03450	SSF56762	HydB/Nqo4-like
YYU_03455	SSF51905	FAD/NAD(P)-binding domain
YYU_03460	SSF55326	PurM N-terminal domain-like
YYU_03460	SSF56042	PurM C-terminal domain-like
YYU_03465	SSF57863	ArfGap/RecO-like zinc finger
YYU_03485	SSF48403	Ankyrin repeat
YYU_03505	SSF56176	FAD-binding/transporter-associated domain-like
YYU_03505	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
YYU_03510	SSF53850	Periplasmic binding protein-like II
YYU_03510	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
YYU_03515	SSF53244	MurD-like peptide ligases, peptide-binding domain
YYU_03515	SSF53623	MurD-like peptide ligases, catalytic domain
YYU_03520	SSF75304	Amidase signature (AS) enzymes
YYU_03525	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YYU_03555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_03555	SSF54211	Ribosomal protein S5 domain 2-like
YYU_03570	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
YYU_03570	SSF88946	Sigma2 domain of RNA polymerase sigma factors
YYU_03590	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_03590	SSF54980	EF-G C-terminal domain-like
YYU_03595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_03600	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
YYU_03600	SSF50249	Nucleic acid-binding proteins
YYU_03600	SSF54211	Ribosomal protein S5 domain 2-like
YYU_03600	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
YYU_03600	SSF55666	Ribonuclease PH domain 2-like
YYU_03605	SSF47060	S15/NS1 RNA-binding domain
YYU_03610	SSF55120	Pseudouridine synthase
YYU_03615	SSF53067	Actin-like ATPase domain
YYU_03635	SSF101738	SspB-like
YYU_03655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_03660	SSF55821	YrdC/RibB
YYU_03665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_03670	SSF47729	IHF-like DNA-binding proteins
YYU_03685	SSF63892	Pyridoxine 5'-phosphate synthase
YYU_03690	SSF52374	Nucleotidylyl transferase
YYU_03705	SSF75217	alpha/beta knot
YYU_03705	SSF88697	PUA domain-like
YYU_03710	SSF52833	Thioredoxin-like
YYU_03715	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYU_03715	SSF50677	ValRS/IleRS/LeuRS editing domain
YYU_03715	SSF52374	Nucleotidylyl transferase
YYU_03730	SSF54862	4Fe-4S ferredoxins
YYU_03735	SSF51306	LexA/Signal peptidase
YYU_03740	SSF89360	HesB-like domain
YYU_03780	SSF52943	ATP synthase (F1-ATPase), gamma subunit
YYU_03785	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
YYU_03925	SSF103473	MFS general substrate transporter
YYU_03935	SSF51569	Aldolase
YYU_03940	SSF52402	Adenine nucleotide alpha hydrolases-like
YYU_03940	SSF56317	Carbon-nitrogen hydrolase
YYU_03955	SSF48334	DNA repair protein MutS, domain III
YYU_03955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_03955	SSF53150	DNA repair protein MutS, domain II
YYU_03955	SSF55271	DNA repair protein MutS, domain I
YYU_03965	SSF54197	HIT-like
YYU_03970	SSF56563	Major capsid protein gp5
YYU_03980	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YYU_03990	SSF48557	L-aspartase-like
YYU_04020	SSF55681	Class II aaRS and biotin synthetases
YYU_04025	SSF103473	MFS general substrate transporter
YYU_04040	SSF102114	Radical SAM enzymes
YYU_04065	SSF46600	C-terminal UvrC-binding domain of UvrB
YYU_04065	SSF47781	RuvA domain 2-like
YYU_04065	SSF82771	GIY-YIG endonuclease
YYU_04080	SSF110942	HSP90 C-terminal domain
YYU_04080	SSF54211	Ribosomal protein S5 domain 2-like
YYU_04080	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYU_04090	SSF103473	MFS general substrate transporter
YYU_04100	SSF48150	DNA-glycosylase
YYU_04105	SSF101904	GyrA/ParC C-terminal domain-like
YYU_04105	SSF56719	Type II DNA topoisomerase
YYU_04120	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04145	SSF52402	Adenine nucleotide alpha hydrolases-like
YYU_04155	SSF47240	Ferritin-like
YYU_04225	SSF158442	DsbB-like
YYU_04235	SSF57829	Zn-binding ribosomal proteins
YYU_04250	SSF48403	Ankyrin repeat
YYU_04255	SSF47336	ACP-like
YYU_04260	SSF53901	Thiolase-like
YYU_04275	SSF102405	MCP/YpsA-like
YYU_04300	SSF56925	OMPA-like
YYU_04305	SSF118116	DNA mismatch repair protein MutL
YYU_04305	SSF54211	Ribosomal protein S5 domain 2-like
YYU_04305	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYU_04315	SSF74653	TolA/TonB C-terminal domain
YYU_04325	SSF47384	Homodimeric domain of signal transducing histidine kinase
YYU_04325	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
YYU_04330	SSF53383	PLP-dependent transferases
YYU_04370	SSF46785	"Winged helix" DNA-binding domain
YYU_04370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04380	SSF54631	CBS-domain pair
YYU_04380	SSF56176	FAD-binding/transporter-associated domain-like
YYU_04385	SSF51391	Thiamin phosphate synthase
YYU_04395	SSF52821	Rhodanese/Cell cycle control phosphatase
YYU_04410	SSF50486	FMT C-terminal domain-like
YYU_04410	SSF53328	Formyltransferase
YYU_04425	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04425	SSF54211	Ribosomal protein S5 domain 2-like
YYU_04425	SSF88697	PUA domain-like
YYU_04430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04430	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YYU_04435	SSF52096	ClpP/crotonase
YYU_04455	SSF101307	YutG-like
YYU_04460	SSF55729	Acyl-CoA N-acyltransferases (Nat)
YYU_04465	SSF55785	PYP-like sensor domain (PAS domain)
YYU_04470	SSF140319	IscX-like
YYU_04475	SSF53383	PLP-dependent transferases
YYU_04485	SSF56925	OMPA-like
YYU_04495	SSF53807	"Helical backbone" metal receptor
YYU_04500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04505	SSF56112	Protein kinase-like (PK-like)
YYU_04515	SSF50331	MOP-like
YYU_04515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04525	SSF111304	Recombination protein RecR
YYU_04530	SSF55174	Alpha-L RNA-binding motif
YYU_04550	SSF53613	Ribokinase-like
YYU_04555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04575	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YYU_04580	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
YYU_04590	SSF55205	EPT/RTPC-like
YYU_04595	SSF89550	PHP domain-like
YYU_04600	SSF82657	BolA-like
YYU_04625	SSF50475	FMN-binding split barrel
YYU_04635	SSF53474	alpha/beta-Hydrolases
YYU_04640	SSF56420	Peptide deformylase
YYU_04645	SSF51395	FMN-linked oxidoreductases
YYU_04650	SSF53067	Actin-like ATPase domain
YYU_04660	SSF53383	PLP-dependent transferases
YYU_04665	SSF56925	OMPA-like
YYU_04690	SSF53098	Ribonuclease H-like
YYU_04695	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YYU_04700	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
YYU_04705	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
YYU_04705	SSF54736	ClpS-like
YYU_04710	SSF160369	Ribosomal protein L10-like
YYU_04715	SSF56808	Ribosomal protein L1
YYU_04720	SSF46906	Ribosomal protein L11, C-terminal domain
YYU_04720	SSF54747	Ribosomal L11/L12e N-terminal domain
YYU_04725	SSF50104	Translation proteins SH3-like domain
YYU_04725	SSF82679	N-utilization substance G protein NusG, N-terminal domain
YYU_04740	SSF50447	Translation proteins
YYU_04740	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
YYU_04740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04745	SSF50447	Translation proteins
YYU_04745	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04745	SSF54211	Ribosomal protein S5 domain 2-like
YYU_04745	SSF54980	EF-G C-terminal domain-like
YYU_04750	SSF47973	Ribosomal protein S7
YYU_04755	SSF50249	Nucleic acid-binding proteins
YYU_04760	SSF56281	Metallo-hydrolase/oxidoreductase
YYU_04765	SSF82171	DPP6 N-terminal domain-like
YYU_04800	SSF161098	MetI-like
YYU_04805	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
YYU_04810	SSF52833	Thioredoxin-like
YYU_04815	SSF53850	Periplasmic binding protein-like II
YYU_04825	SSF52210	Succinyl-CoA synthetase domains
YYU_04825	SSF56059	Glutathione synthetase ATP-binding domain-like
YYU_04830	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_04830	SSF52210	Succinyl-CoA synthetase domains
YYU_04850	SSF52402	Adenine nucleotide alpha hydrolases-like
YYU_04860	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
YYU_04860	SSF50447	Translation proteins
YYU_04860	SSF55186	ThrRS/AlaRS common domain
YYU_04860	SSF55681	Class II aaRS and biotin synthetases
YYU_04865	SSF161098	MetI-like
YYU_04870	SSF55931	Glutamine synthetase/guanido kinase
YYU_04875	SSF56281	Metallo-hydrolase/oxidoreductase
YYU_04910	SSF51905	FAD/NAD(P)-binding domain
YYU_04910	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
YYU_04915	SSF50249	Nucleic acid-binding proteins
YYU_04915	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04915	SSF68912	Rho N-terminal domain-like
YYU_04920	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YYU_04925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_04930	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_04955	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYU_04955	SSF52374	Nucleotidylyl transferase
YYU_04965	SSF56925	OMPA-like
YYU_04980	SSF49503	Cupredoxins
YYU_04980	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
YYU_04985	SSF81442	Cytochrome c oxidase subunit I-like
YYU_04995	SSF48452	TPR-like
YYU_05000	SSF51246	Rudiment single hybrid motif
YYU_05000	SSF52440	PreATP-grasp domain
YYU_05000	SSF56059	Glutathione synthetase ATP-binding domain-like
YYU_05025	SSF52402	Adenine nucleotide alpha hydrolases-like
YYU_05040	SSF55979	DNA clamp
YYU_05045	SSF53098	Ribonuclease H-like
YYU_05050	SSF52172	CheY-like
YYU_05055	SSF47413	lambda repressor-like DNA-binding domains
YYU_05055	SSF51306	LexA/Signal peptidase
YYU_05060	SSF50324	Inorganic pyrophosphatase
YYU_05090	SSF54211	Ribosomal protein S5 domain 2-like
YYU_05095	SSF52161	Ribosomal protein L13
YYU_05100	SSF56954	Outer membrane efflux proteins (OEP)
YYU_05110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05115	SSF53271	PRTase-like
YYU_05120	SSF141000	Glu-tRNAGln amidotransferase C subunit
YYU_05130	SSF56925	OMPA-like
YYU_05145	SSF52016	LeuD/IlvD-like
YYU_05145	SSF53732	Aconitase iron-sulfur domain
YYU_05155	SSF51246	Rudiment single hybrid motif
YYU_05155	SSF52440	PreATP-grasp domain
YYU_05155	SSF56059	Glutathione synthetase ATP-binding domain-like
YYU_05160	SSF110069	ApaG-like
YYU_05185	SSF56925	OMPA-like
YYU_05205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05285	SSF117892	Band 7/SPFH domain
YYU_05290	SSF117892	Band 7/SPFH domain
YYU_05295	SSF50156	PDZ domain-like
YYU_05295	SSF50494	Trypsin-like serine proteases
YYU_05300	SSF54768	dsRNA-binding domain-like
YYU_05300	SSF69065	RNase III domain-like
YYU_05305	SSF110111	Ctag/Cox11
YYU_05315	SSF56925	OMPA-like
YYU_05330	SSF56925	OMPA-like
YYU_05345	SSF63411	LuxS/MPP-like metallohydrolase
YYU_05350	SSF63411	LuxS/MPP-like metallohydrolase
YYU_05360	SSF52374	Nucleotidylyl transferase
YYU_05360	SSF82114	Riboflavin kinase-like
YYU_05365	SSF52833	Thioredoxin-like
YYU_05375	SSF53067	Actin-like ATPase domain
YYU_05380	SSF64182	DHH phosphoesterases
YYU_05385	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
YYU_05395	SSF56925	OMPA-like
YYU_05400	SSF56925	OMPA-like
YYU_05405	SSF141571	Pentapeptide repeat-like
YYU_05415	SSF53271	PRTase-like
YYU_05420	SSF69572	Activating enzymes of the ubiquitin-like proteins
YYU_05425	SSF52833	Thioredoxin-like
YYU_05435	SSF56925	OMPA-like
YYU_05440	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05440	SSF81767	Pre-protein crosslinking domain of SecA
YYU_05440	SSF81886	Helical scaffold and wing domains of SecA
YYU_05445	SSF140990	FtsH protease domain-like
YYU_05445	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05465	SSF53067	Actin-like ATPase domain
YYU_05495	SSF81333	F1F0 ATP synthase subunit C
YYU_05500	SSF81336	F1F0 ATP synthase subunit A
YYU_05505	SSF56796	Dehydroquinate synthase-like
YYU_05510	SSF56925	OMPA-like
YYU_05515	SSF56925	OMPA-like
YYU_05525	SSF51161	Trimeric LpxA-like enzymes
YYU_05530	SSF51230	Single hybrid motif
YYU_05530	SSF52777	CoA-dependent acyltransferases
YYU_05535	SSF55920	Creatinase/aminopeptidase
YYU_05540	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_05560	SSF81442	Cytochrome c oxidase subunit I-like
YYU_05570	SSF52335	Methylglyoxal synthase-like
YYU_05570	SSF53927	Cytidine deaminase-like
YYU_05575	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
YYU_05580	SSF111384	OmpH-like
YYU_05590	SSF50156	PDZ domain-like
YYU_05595	SSF109910	YgfY-like
YYU_05600	SSF52833	Thioredoxin-like
YYU_05605	SSF56601	beta-lactamase/transpeptidase-like
YYU_05605	SSF69189	Penicillin-binding protein associated domain
YYU_05610	SSF56925	OMPA-like
YYU_05615	SSF81301	Nucleotidyltransferase
YYU_05615	SSF81891	Poly A polymerase C-terminal region-like
YYU_05620	SSF54919	Nucleoside diphosphate kinase, NDK
YYU_05625	SSF47413	lambda repressor-like DNA-binding domains
YYU_05630	SSF56925	OMPA-like
YYU_05635	SSF56925	OMPA-like
YYU_05640	SSF56925	OMPA-like
YYU_05645	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05650	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
YYU_05650	SSF50677	ValRS/IleRS/LeuRS editing domain
YYU_05650	SSF52374	Nucleotidylyl transferase
YYU_05660	SSF56925	OMPA-like
YYU_05665	SSF47364	Domain of the SRP/SRP receptor G-proteins
YYU_05665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05675	SSF56925	OMPA-like
YYU_05690	SSF48256	Citrate synthase
YYU_05695	SSF52317	Class I glutamine amidotransferase-like
YYU_05695	SSF52402	Adenine nucleotide alpha hydrolases-like
YYU_05695	SSF54810	GMP synthetase C-terminal dimerisation domain
YYU_05710	SSF56925	OMPA-like
YYU_05715	SSF56925	OMPA-like
YYU_05720	SSF56925	OMPA-like
YYU_05740	SSF53383	PLP-dependent transferases
YYU_05745	SSF52374	Nucleotidylyl transferase
YYU_05745	SSF55174	Alpha-L RNA-binding motif
YYU_05755	SSF54368	Glutamine synthetase, N-terminal domain
YYU_05755	SSF55931	Glutamine synthetase/guanido kinase
YYU_05760	SSF48576	Terpenoid synthases
YYU_05770	SSF56925	OMPA-like
YYU_05785	SSF48019	post-AAA+ oligomerization domain-like
YYU_05785	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05800	SSF56925	OMPA-like
YYU_05805	SSF56925	OMPA-like
YYU_05810	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
YYU_05810	SSF51230	Single hybrid motif
YYU_05810	SSF52777	CoA-dependent acyltransferases
YYU_05815	SSF51569	Aldolase
YYU_05840	SSF54364	Translation initiation factor IF3, N-terminal domain
YYU_05840	SSF55200	Translation initiation factor IF3, C-terminal domain
YYU_05845	SSF52954	Class II aaRS ABD-related
YYU_05845	SSF55186	ThrRS/AlaRS common domain
YYU_05845	SSF55681	Class II aaRS and biotin synthetases
YYU_05850	SSF142433	CinA-like
YYU_05855	SSF50104	Translation proteins SH3-like domain
YYU_05860	SSF75217	alpha/beta knot
YYU_05865	SSF50346	PRC-barrel domain
YYU_05865	SSF50447	Translation proteins
YYU_05870	SSF56925	OMPA-like
YYU_05875	SSF103025	Folate-binding domain
YYU_05885	SSF56925	OMPA-like
YYU_05890	SSF56925	OMPA-like
YYU_05895	SSF56925	OMPA-like
YYU_05900	SSF69765	IpsF-like
YYU_05905	SSF53448	Nucleotide-diphospho-sugar transferases
YYU_05915	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
YYU_05920	SSF52833	Thioredoxin-like
YYU_05925	SSF47729	IHF-like DNA-binding proteins
YYU_05930	SSF46955	Putative DNA-binding domain
YYU_05945	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05945	SSF81271	TGS-like
YYU_05955	SSF56925	OMPA-like
YYU_05960	SSF116878	TrmE connector domain
YYU_05960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_05965	SSF55486	Metalloproteases ("zincins"), catalytic domain
YYU_05970	SSF88697	PUA domain-like
YYU_05975	SSF52490	Tubulin nucleotide-binding domain-like
YYU_05975	SSF55307	Tubulin C-terminal domain-like
YYU_05995	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
YYU_06000	SSF50249	Nucleic acid-binding proteins
YYU_06000	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_06005	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_06010	SSF53271	PRTase-like
YYU_06010	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
YYU_06015	SSF53178	Peptidyl-tRNA hydrolase-like
YYU_06020	SSF50715	Ribosomal protein L25-like
YYU_06025	SSF53271	PRTase-like
YYU_06030	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_06035	SSF52833	Thioredoxin-like
YYU_06045	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
YYU_06045	SSF52922	TK C-terminal domain-like
YYU_06060	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
YYU_06065	SSF56925	OMPA-like
YYU_06070	SSF56925	OMPA-like
YYU_06090	SSF48452	TPR-like
YYU_06090	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
YYU_06100	SSF142695	RibA-like
YYU_06110	SSF53748	Phosphoglycerate kinase
YYU_06135	SSF56925	OMPA-like
YYU_06140	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YYU_06145	SSF52980	Restriction endonuclease-like
YYU_06150	SSF56925	OMPA-like
YYU_06165	SSF74982	Small protein B (SmpB)
YYU_06170	SSF55821	YrdC/RibB
YYU_06175	SSF46557	GreA transcript cleavage protein, N-terminal domain
YYU_06175	SSF54534	FKBP-like
YYU_06180	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
YYU_06180	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
YYU_06180	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_06185	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
YYU_06200	SSF48452	TPR-like
YYU_06225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_06235	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_06235	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYU_06240	SSF82607	YbaB-like
YYU_06245	SSF48019	post-AAA+ oligomerization domain-like
YYU_06245	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_06250	SSF51735	NAD(P)-binding Rossmann-fold domains
YYU_06250	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
YYU_06255	SSF56925	OMPA-like
YYU_06260	SSF56925	OMPA-like
YYU_06265	SSF56925	OMPA-like
YYU_06270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_06270	SSF54752	RecA protein, C-terminal domain
YYU_06275	SSF56925	OMPA-like
YYU_06285	SSF56925	OMPA-like
YYU_06290	SSF56925	OMPA-like
YYU_06295	SSF143968	UbiD C-terminal domain-like
YYU_06295	SSF50475	FMN-binding split barrel
YYU_06300	SSF56925	OMPA-like
YYU_06320	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
YYU_06325	SSF46600	C-terminal UvrC-binding domain of UvrB
YYU_06325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_06345	SSF52141	Uracil-DNA glycosylase-like
YYU_06350	SSF56420	Peptide deformylase
YYU_06355	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
YYU_06360	SSF46992	Ribosomal protein S20
YYU_06365	SSF56420	Peptide deformylase
YYU_06435	SSF56925	OMPA-like
YYU_06445	SSF56925	OMPA-like
YYU_06455	SSF56925	OMPA-like
YYU_06465	SSF160240	Cation efflux protein cytoplasmic domain-like
YYU_06465	SSF161111	Cation efflux protein transmembrane domain-like
YYU_06480	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
YYU_06480	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
YYU_06500	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_06505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
YYU_06520	SSF54427	NTF2-like
YYU_06535	SSF52540	P-loop containing nucleoside triphosphate hydrolases