ARUE_c00240	PWY-5958	acridone alkaloid biosynthesis
ARUE_c00240	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ARUE_c00240	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ARUE_c00520	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c00520	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c00590	PWY-4061	glutathione-mediated detoxification I
ARUE_c00590	PWY-6842	glutathione-mediated detoxification II
ARUE_c00590	PWY-7112	4-hydroxy-2-nonenal detoxification
ARUE_c00590	PWY-7533	gliotoxin biosynthesis
ARUE_c00610	PWY-6825	phosphatidylcholine biosynthesis V
ARUE_c00650	PWY-6807	xyloglucan degradation II (exoglucanase)
ARUE_c00830	PWY-3121	linamarin degradation
ARUE_c00830	PWY-5176	coumarin biosynthesis (via 2-coumarate)
ARUE_c00830	PWY-6002	lotaustralin degradation
ARUE_c00830	PWY-6788	cellulose degradation II (fungi)
ARUE_c00830	PWY-7089	taxiphyllin bioactivation
ARUE_c00830	PWY-7091	linustatin bioactivation
ARUE_c00830	PWY-7092	neolinustatin bioactivation
ARUE_c00920	PWY-2723	trehalose degradation V
ARUE_c00920	PWY-3801	sucrose degradation II (sucrose synthase)
ARUE_c00920	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
ARUE_c00920	PWY-5661	GDP-glucose biosynthesis
ARUE_c00920	PWY-5661-1	ARUE_c00920
ARUE_c00920	PWY-5940	streptomycin biosynthesis
ARUE_c00920	PWY-5941	glycogen degradation II (eukaryotic)
ARUE_c00920	PWY-622	starch biosynthesis
ARUE_c00920	PWY-6731	starch degradation III
ARUE_c00920	PWY-6737	starch degradation V
ARUE_c00920	PWY-6749	CMP-legionaminate biosynthesis I
ARUE_c00920	PWY-7238	sucrose biosynthesis II
ARUE_c00920	PWY-7343	UDP-glucose biosynthesis
ARUE_c00960	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ARUE_c00990	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
ARUE_c01000	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ARUE_c01000	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ARUE_c01000	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
ARUE_c01010	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
ARUE_c01290	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ARUE_c01290	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ARUE_c01320	PWY-6599	guanine and guanosine salvage II
ARUE_c01320	PWY-6609	adenine and adenosine salvage III
ARUE_c01320	PWY-6610	adenine and adenosine salvage IV
ARUE_c01320	PWY-6620	guanine and guanosine salvage
ARUE_c01360	PWY-5663	tetrahydrobiopterin biosynthesis I
ARUE_c01360	PWY-5664	tetrahydrobiopterin biosynthesis II
ARUE_c01360	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ARUE_c01360	PWY-6703	preQ<sub>0</sub> biosynthesis
ARUE_c01360	PWY-6983	tetrahydrobiopterin biosynthesis III
ARUE_c01360	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ARUE_c01370	PWY-6614	tetrahydrofolate biosynthesis
ARUE_c01380	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ARUE_c01380	PWY-6148	tetrahydromethanopterin biosynthesis
ARUE_c01380	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ARUE_c01380	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ARUE_c01390	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ARUE_c01390	PWY-6148	tetrahydromethanopterin biosynthesis
ARUE_c01390	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
ARUE_c01390	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ARUE_c01630	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ARUE_c01630	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ARUE_c01630	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ARUE_c01630	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ARUE_c01660	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c01660	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c01800	PWY-5169	cyanurate degradation
ARUE_c01800	PWY-5703	urea degradation I
ARUE_c01800	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ARUE_c01810	PWY-5169	cyanurate degradation
ARUE_c01810	PWY-5703	urea degradation I
ARUE_c02060	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ARUE_c02080	PWY-5704	urea degradation II
ARUE_c02090	PWY-5704	urea degradation II
ARUE_c02100	PWY-5704	urea degradation II
ARUE_c02330	PWY-1081	homogalacturonan degradation
ARUE_c02330	PWY-7246	pectin degradation II
ARUE_c02330	PWY-7248	pectin degradation III
ARUE_c02340	PWY-1081	homogalacturonan degradation
ARUE_c02340	PWY-7246	pectin degradation II
ARUE_c02340	PWY-7248	pectin degradation III
ARUE_c02420	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ARUE_c02420	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ARUE_c02920	PWY-7310	D-glucosaminate degradation
ARUE_c02980	PWY-6840	homoglutathione biosynthesis
ARUE_c02980	PWY-7255	ergothioneine biosynthesis I (bacteria)
ARUE_c03140	PWY-5943	&beta;-carotene biosynthesis
ARUE_c03140	PWY-5947	lutein biosynthesis
ARUE_c03150	PWY-5943	&beta;-carotene biosynthesis
ARUE_c03150	PWY-5947	lutein biosynthesis
ARUE_c03190	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
ARUE_c03190	PWY-6174	mevalonate pathway II (archaea)
ARUE_c03190	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
ARUE_c03190	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
ARUE_c03190	PWY-7102	bisabolene biosynthesis
ARUE_c03190	PWY-7391	isoprene biosynthesis II (engineered)
ARUE_c03190	PWY-7524	mevalonate pathway III (archaea)
ARUE_c03190	PWY-7560	methylerythritol phosphate pathway II
ARUE_c03190	PWY-922	mevalonate pathway I
ARUE_c03290	PWY-5101	L-isoleucine biosynthesis II
ARUE_c03290	PWY-5103	L-isoleucine biosynthesis III
ARUE_c03290	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c03290	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c03710	PWY-5028	L-histidine degradation II
ARUE_c03710	PWY-5030	L-histidine degradation III
ARUE_c03720	PWY-5028	L-histidine degradation II
ARUE_c03720	PWY-5030	L-histidine degradation III
ARUE_c03750	PWY-5022	4-aminobutanoate degradation V
ARUE_c03750	PWY-6728	methylaspartate cycle
ARUE_c03750	PWY-7126	ethylene biosynthesis IV
ARUE_c04480	PWY-6823	molybdenum cofactor biosynthesis
ARUE_c04510	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
ARUE_c04510	PWY-2201	folate transformations I
ARUE_c04510	PWY-3841	folate transformations II
ARUE_c04510	PWY-5030	L-histidine degradation III
ARUE_c04510	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c04510	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ARUE_c04520	PWY-5030	L-histidine degradation III
ARUE_c04520	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c04540	PWY-2201	folate transformations I
ARUE_c04540	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c04560	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
ARUE_c04640	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c04640	PWY-5686	UMP biosynthesis
ARUE_c04650	PWY-5941	glycogen degradation II (eukaryotic)
ARUE_c04650	PWY-6724	starch degradation II
ARUE_c04650	PWY-6737	starch degradation V
ARUE_c04650	PWY-7238	sucrose biosynthesis II
ARUE_c04690	PWY-5642	2,4-dinitrotoluene degradation
ARUE_c04690	PWY-6373	acrylate degradation
ARUE_c04980	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
ARUE_c04980	PWY-7248	pectin degradation III
ARUE_c05010	PWY-5530	sorbitol biosynthesis II
ARUE_c05010	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c05060	PWY-5686	UMP biosynthesis
ARUE_c05240	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c05240	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c05240	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c05240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c05240	PWY-7385	1,3-propanediol biosynthesis (engineered)
ARUE_c05310	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c05390	PWY-1622	formaldehyde assimilation I (serine pathway)
ARUE_c05390	PWY-5392	reductive TCA cycle II
ARUE_c05390	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ARUE_c05390	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c05390	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c05390	PWY-6728	methylaspartate cycle
ARUE_c05390	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c05390	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ARUE_c05390	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ARUE_c05410	PWY-5392	reductive TCA cycle II
ARUE_c05410	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ARUE_c05410	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c05410	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c05410	PWY-6728	methylaspartate cycle
ARUE_c05410	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c05410	PWY-7254	TCA cycle VII (acetate-producers)
ARUE_c05410	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ARUE_c05480	PWY-5751	phenylethanol biosynthesis
ARUE_c05960	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ARUE_c05960	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ARUE_c05960	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ARUE_c05970	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ARUE_c05970	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ARUE_c05970	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ARUE_c05980	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ARUE_c05980	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ARUE_c05980	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ARUE_c06130	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
ARUE_c06130	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c06250	PWY-2941	L-lysine biosynthesis II
ARUE_c06250	PWY-2942	L-lysine biosynthesis III
ARUE_c06250	PWY-5097	L-lysine biosynthesis VI
ARUE_c06250	PWY-6559	spermidine biosynthesis II
ARUE_c06250	PWY-6562	norspermidine biosynthesis
ARUE_c06250	PWY-7153	grixazone biosynthesis
ARUE_c06310	PWY-5663	tetrahydrobiopterin biosynthesis I
ARUE_c06310	PWY-5664	tetrahydrobiopterin biosynthesis II
ARUE_c06310	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ARUE_c06310	PWY-6703	preQ<sub>0</sub> biosynthesis
ARUE_c06310	PWY-6983	tetrahydrobiopterin biosynthesis III
ARUE_c06310	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ARUE_c06350	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
ARUE_c06350	PWY-6853	ethylene biosynthesis II (microbes)
ARUE_c06350	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
ARUE_c06550	PWY-5941	glycogen degradation II (eukaryotic)
ARUE_c06550	PWY-6724	starch degradation II
ARUE_c06550	PWY-6737	starch degradation V
ARUE_c06550	PWY-7238	sucrose biosynthesis II
ARUE_c06830	PWY-6728	methylaspartate cycle
ARUE_c06830	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c06830	PWY-7118	chitin degradation to ethanol
ARUE_c06830	PWY-7294	xylose degradation IV
ARUE_c06830	PWY-7295	L-arabinose degradation IV
ARUE_c06840	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c06980	PWY-6700	queuosine biosynthesis
ARUE_c07170	PWY-1622	formaldehyde assimilation I (serine pathway)
ARUE_c07170	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ARUE_c07170	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c07170	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c07170	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
ARUE_c07170	PWY-6549	L-glutamine biosynthesis III
ARUE_c07170	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ARUE_c07170	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ARUE_c07170	PWY-7124	ethylene biosynthesis V (engineered)
ARUE_c07290	PWY-7456	mannan degradation
ARUE_c07460	PWY-7183	pyrimidine nucleobases salvage I
ARUE_c07730	PWY-5350	thiosulfate disproportionation III (rhodanese)
ARUE_c07760	PWY-2941	L-lysine biosynthesis II
ARUE_c07760	PWY-2942	L-lysine biosynthesis III
ARUE_c07760	PWY-5097	L-lysine biosynthesis VI
ARUE_c07830	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ARUE_c07870	PWY-6749	CMP-legionaminate biosynthesis I
ARUE_c08050	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ARUE_c08130	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c08130	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c08130	PWY-7560	methylerythritol phosphate pathway II
ARUE_c08410	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ARUE_c08410	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c08410	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c08410	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
ARUE_c08410	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ARUE_c08410	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ARUE_c08450	PWY-1622	formaldehyde assimilation I (serine pathway)
ARUE_c08450	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c08510	PWY-7560	methylerythritol phosphate pathway II
ARUE_c08520	PWY-7560	methylerythritol phosphate pathway II
ARUE_c08600	PWY-5941	glycogen degradation II (eukaryotic)
ARUE_c08600	PWY-622	starch biosynthesis
ARUE_c08600	PWY-6731	starch degradation III
ARUE_c08600	PWY-6737	starch degradation V
ARUE_c08600	PWY-7238	sucrose biosynthesis II
ARUE_c08620	PWY-2622	trehalose biosynthesis IV
ARUE_c08630	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
ARUE_c08630	PWY-622	starch biosynthesis
ARUE_c08750	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c08750	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c08810	PWY-6902	chitin degradation II
ARUE_c08880	PWY-6654	phosphopantothenate biosynthesis III
ARUE_c09180	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
ARUE_c09180	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
ARUE_c09260	PWY-43	putrescine biosynthesis II
ARUE_c09340	PWY-5030	L-histidine degradation III
ARUE_c09340	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c09760	PWY-6823	molybdenum cofactor biosynthesis
ARUE_c09980	PWY-5392	reductive TCA cycle II
ARUE_c09980	PWY-5537	pyruvate fermentation to acetate V
ARUE_c09980	PWY-5538	pyruvate fermentation to acetate VI
ARUE_c09980	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c09980	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c09980	PWY-6728	methylaspartate cycle
ARUE_c09980	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c09980	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ARUE_c09990	PWY-5392	reductive TCA cycle II
ARUE_c09990	PWY-5537	pyruvate fermentation to acetate V
ARUE_c09990	PWY-5538	pyruvate fermentation to acetate VI
ARUE_c09990	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c09990	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c09990	PWY-6728	methylaspartate cycle
ARUE_c09990	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c09990	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ARUE_c10130	PWY-40	putrescine biosynthesis I
ARUE_c10130	PWY-6305	putrescine biosynthesis IV
ARUE_c10410	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
ARUE_c10440	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
ARUE_c10560	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c10560	PWY-5723	Rubisco shunt
ARUE_c10570	PWY-1361	benzoyl-CoA degradation I (aerobic)
ARUE_c10570	PWY-5109	2-methylbutanoate biosynthesis
ARUE_c10570	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ARUE_c10570	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ARUE_c10570	PWY-5177	glutaryl-CoA degradation
ARUE_c10570	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ARUE_c10570	PWY-6435	4-hydroxybenzoate biosynthesis V
ARUE_c10570	PWY-6583	pyruvate fermentation to butanol I
ARUE_c10570	PWY-6863	pyruvate fermentation to hexanol
ARUE_c10570	PWY-6883	pyruvate fermentation to butanol II
ARUE_c10570	PWY-6944	androstenedione degradation
ARUE_c10570	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ARUE_c10570	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ARUE_c10570	PWY-7007	methyl ketone biosynthesis
ARUE_c10570	PWY-7046	4-coumarate degradation (anaerobic)
ARUE_c10570	PWY-7094	fatty acid salvage
ARUE_c10570	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ARUE_c10570	PWY-735	jasmonic acid biosynthesis
ARUE_c10570	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ARUE_c10600	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c10600	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c10600	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c10600	PWY-7003	glycerol degradation to butanol
ARUE_c10690	PWY-6610	adenine and adenosine salvage IV
ARUE_c10790	PWY-6807	xyloglucan degradation II (exoglucanase)
ARUE_c11170	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
ARUE_c11270	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ARUE_c11270	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ARUE_c11320	PWY-6123	inosine-5'-phosphate biosynthesis I
ARUE_c11320	PWY-6124	inosine-5'-phosphate biosynthesis II
ARUE_c11320	PWY-7234	inosine-5'-phosphate biosynthesis III
ARUE_c11370	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c11370	PWY-6549	L-glutamine biosynthesis III
ARUE_c11370	PWY-6728	methylaspartate cycle
ARUE_c11370	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c11370	PWY-7124	ethylene biosynthesis V (engineered)
ARUE_c11370	PWY-7254	TCA cycle VII (acetate-producers)
ARUE_c11370	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ARUE_c11550	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ARUE_c11620	PWY-2201	folate transformations I
ARUE_c11620	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c11630	PWY-1622	formaldehyde assimilation I (serine pathway)
ARUE_c11630	PWY-181	photorespiration
ARUE_c11630	PWY-2161	folate polyglutamylation
ARUE_c11630	PWY-2201	folate transformations I
ARUE_c11630	PWY-3661	glycine betaine degradation I
ARUE_c11630	PWY-3661-1	glycine betaine degradation II (mammalian)
ARUE_c11630	PWY-3841	folate transformations II
ARUE_c11630	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c11640	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
ARUE_c11640	PWY-2201	folate transformations I
ARUE_c11640	PWY-3841	folate transformations II
ARUE_c11640	PWY-5030	L-histidine degradation III
ARUE_c11640	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c11640	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
ARUE_c11800	PWY-3781	aerobic respiration I (cytochrome c)
ARUE_c11800	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ARUE_c11800	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ARUE_c11800	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c11800	PWY-6728	methylaspartate cycle
ARUE_c11800	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c11800	PWY-7254	TCA cycle VII (acetate-producers)
ARUE_c11800	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ARUE_c11810	PWY-3781	aerobic respiration I (cytochrome c)
ARUE_c11810	PWY-4302	aerobic respiration III (alternative oxidase pathway)
ARUE_c11810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ARUE_c11810	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c11810	PWY-6728	methylaspartate cycle
ARUE_c11810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c11810	PWY-7254	TCA cycle VII (acetate-producers)
ARUE_c11810	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ARUE_c11840	PWY-5659	GDP-mannose biosynthesis
ARUE_c11840	PWY-6073	alginate biosynthesis I (algal)
ARUE_c11840	PWY-6082	alginate biosynthesis II (bacterial)
ARUE_c11840	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
ARUE_c11930	PWY-6556	pyrimidine ribonucleosides salvage II
ARUE_c11930	PWY-7181	pyrimidine deoxyribonucleosides degradation
ARUE_c11930	PWY-7193	pyrimidine ribonucleosides salvage I
ARUE_c11930	PWY-7199	pyrimidine deoxyribonucleosides salvage
ARUE_c11940	PWY-7181	pyrimidine deoxyribonucleosides degradation
ARUE_c11990	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c11990	PWY-1622	formaldehyde assimilation I (serine pathway)
ARUE_c11990	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ARUE_c11990	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c11990	PWY-5723	Rubisco shunt
ARUE_c11990	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c11990	PWY-6886	1-butanol autotrophic biosynthesis
ARUE_c11990	PWY-6901	superpathway of glucose and xylose degradation
ARUE_c11990	PWY-7003	glycerol degradation to butanol
ARUE_c11990	PWY-7124	ethylene biosynthesis V (engineered)
ARUE_c11990	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ARUE_c12080	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ARUE_c12080	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ARUE_c12080	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
ARUE_c12150	PWY-3821	galactose degradation III
ARUE_c12150	PWY-6317	galactose degradation I (Leloir pathway)
ARUE_c12150	PWY-6527	stachyose degradation
ARUE_c12160	PWY-6317	galactose degradation I (Leloir pathway)
ARUE_c12160	PWY-6527	stachyose degradation
ARUE_c12360	PWY-5392	reductive TCA cycle II
ARUE_c12360	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ARUE_c12360	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c12360	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c12360	PWY-6728	methylaspartate cycle
ARUE_c12360	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c12360	PWY-7254	TCA cycle VII (acetate-producers)
ARUE_c12360	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ARUE_c12370	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ARUE_c12370	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c12370	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ARUE_c12370	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ARUE_c12390	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c12410	PWY-3861	mannitol degradation II
ARUE_c12410	PWY-3881	mannitol biosynthesis
ARUE_c12410	PWY-5659	GDP-mannose biosynthesis
ARUE_c12410	PWY-7456	mannan degradation
ARUE_c12410	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
ARUE_c12430	PWY-6123	inosine-5'-phosphate biosynthesis I
ARUE_c12430	PWY-7234	inosine-5'-phosphate biosynthesis III
ARUE_c12530	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ARUE_c12750	PWY-7560	methylerythritol phosphate pathway II
ARUE_c12800	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ARUE_c12880	PWY-6823	molybdenum cofactor biosynthesis
ARUE_c12880	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c12880	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c12880	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
ARUE_c12970	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
ARUE_c13110	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ARUE_c13110	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ARUE_c13120	PWY-5194	siroheme biosynthesis
ARUE_c13120	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ARUE_c13130	PWY-6683	sulfate reduction III (assimilatory)
ARUE_c13150	PWY-6749	CMP-legionaminate biosynthesis I
ARUE_c13180	PWY-4202	arsenate detoxification I (glutaredoxin)
ARUE_c13180	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ARUE_c13180	PWY-6608	guanosine nucleotides degradation III
ARUE_c13180	PWY-6609	adenine and adenosine salvage III
ARUE_c13180	PWY-6611	adenine and adenosine salvage V
ARUE_c13180	PWY-6620	guanine and guanosine salvage
ARUE_c13180	PWY-6627	salinosporamide A biosynthesis
ARUE_c13180	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
ARUE_c13180	PWY-7179	purine deoxyribonucleosides degradation I
ARUE_c13180	PWY-7179-1	purine deoxyribonucleosides degradation
ARUE_c13340	PWY-4381	fatty acid biosynthesis initiation I
ARUE_c13340	PWY-5743	3-hydroxypropanoate cycle
ARUE_c13340	PWY-5744	glyoxylate assimilation
ARUE_c13340	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ARUE_c13340	PWY-6679	jadomycin biosynthesis
ARUE_c13340	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ARUE_c13360	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ARUE_c13360	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
ARUE_c13660	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ARUE_c13760	PWY-7378	aminopropanol phosphate biosynthesis II
ARUE_c13790	PWY-5028	L-histidine degradation II
ARUE_c13790	PWY-5030	L-histidine degradation III
ARUE_c13830	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
ARUE_c13830	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
ARUE_c13890	PWY-5344	L-homocysteine biosynthesis
ARUE_c13890	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
ARUE_c13900	PWY-5344	L-homocysteine biosynthesis
ARUE_c13990	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c13990	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c14110	PWY-5269	cardiolipin biosynthesis II
ARUE_c14110	PWY-5668	cardiolipin biosynthesis I
ARUE_c14410	PWY-4381	fatty acid biosynthesis initiation I
ARUE_c14410	PWY-5743	3-hydroxypropanoate cycle
ARUE_c14410	PWY-5744	glyoxylate assimilation
ARUE_c14410	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ARUE_c14410	PWY-6679	jadomycin biosynthesis
ARUE_c14410	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ARUE_c14560	PWY-7560	methylerythritol phosphate pathway II
ARUE_c14590	PWY-7560	methylerythritol phosphate pathway II
ARUE_c14800	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
ARUE_c14800	PWY-6167	flavin biosynthesis II (archaea)
ARUE_c14800	PWY-6168	flavin biosynthesis III (fungi)
ARUE_c14860	PWY-6823	molybdenum cofactor biosynthesis
ARUE_c14900	PWY-6823	molybdenum cofactor biosynthesis
ARUE_c14930	PWY-6823	molybdenum cofactor biosynthesis
ARUE_c14940	PWY-2941	L-lysine biosynthesis II
ARUE_c14940	PWY-2942	L-lysine biosynthesis III
ARUE_c14940	PWY-5097	L-lysine biosynthesis VI
ARUE_c14980	PWY-2941	L-lysine biosynthesis II
ARUE_c14980	PWY-2942	L-lysine biosynthesis III
ARUE_c14980	PWY-5097	L-lysine biosynthesis VI
ARUE_c15010	PWY-5269	cardiolipin biosynthesis II
ARUE_c15010	PWY-5668	cardiolipin biosynthesis I
ARUE_c15090	PWY-2781	<i>cis</i>-zeatin biosynthesis
ARUE_c15100	PWY-2941	L-lysine biosynthesis II
ARUE_c15100	PWY-5097	L-lysine biosynthesis VI
ARUE_c15370	PWY-6012	acyl carrier protein metabolism I
ARUE_c15370	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
ARUE_c15420	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c15420	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ARUE_c15430	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c15440	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c15440	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ARUE_c15460	PWY-4981	L-proline biosynthesis II (from arginine)
ARUE_c15460	PWY-4984	urea cycle
ARUE_c15460	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ARUE_c15480	PWY-4983	L-citrulline-nitric oxide cycle
ARUE_c15480	PWY-4984	urea cycle
ARUE_c15480	PWY-5	canavanine biosynthesis
ARUE_c15480	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c15480	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ARUE_c15490	PWY-4983	L-citrulline-nitric oxide cycle
ARUE_c15490	PWY-4984	urea cycle
ARUE_c15490	PWY-5	canavanine biosynthesis
ARUE_c15490	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c15490	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ARUE_c15630	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ARUE_c15630	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ARUE_c15630	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
ARUE_c15650	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
ARUE_c15650	PWY-7177	UTP and CTP dephosphorylation II
ARUE_c15650	PWY-7185	UTP and CTP dephosphorylation I
ARUE_c15690	PWY-6502	oxidized GTP and dGTP detoxification
ARUE_c15710	PWY-5747	2-methylcitrate cycle II
ARUE_c15840	PWY-7205	CMP phosphorylation
ARUE_c15960	PWY-5750	itaconate biosynthesis
ARUE_c15960	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c15960	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
ARUE_c15980	PWY-2723	trehalose degradation V
ARUE_c15980	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ARUE_c15980	PWY-5661	GDP-glucose biosynthesis
ARUE_c15980	PWY-7238	sucrose biosynthesis II
ARUE_c15980	PWY-7385	1,3-propanediol biosynthesis (engineered)
ARUE_c16030	PWY-6164	3-dehydroquinate biosynthesis I
ARUE_c16170	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c16170	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c16180	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ARUE_c16180	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ARUE_c16180	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ARUE_c16190	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c16190	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c16210	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ARUE_c16210	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
ARUE_c16210	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ARUE_c16210	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ARUE_c16220	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c16220	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c16260	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ARUE_c16410	PWY-6654	phosphopantothenate biosynthesis III
ARUE_c16420	PWY-381	nitrate reduction II (assimilatory)
ARUE_c16420	PWY-5675	nitrate reduction V (assimilatory)
ARUE_c16420	PWY-6549	L-glutamine biosynthesis III
ARUE_c16420	PWY-6963	ammonia assimilation cycle I
ARUE_c16420	PWY-6964	ammonia assimilation cycle II
ARUE_c16480	PWY-381	nitrate reduction II (assimilatory)
ARUE_c16480	PWY-5675	nitrate reduction V (assimilatory)
ARUE_c16480	PWY-6549	L-glutamine biosynthesis III
ARUE_c16480	PWY-6963	ammonia assimilation cycle I
ARUE_c16480	PWY-6964	ammonia assimilation cycle II
ARUE_c16510	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ARUE_c16510	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
ARUE_c16510	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ARUE_c16520	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ARUE_c16520	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
ARUE_c16600	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
ARUE_c16600	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ARUE_c16610	PWY-5988	wound-induced proteolysis I
ARUE_c16610	PWY-6018	seed germination protein turnover
ARUE_c16790	PWY-5392	reductive TCA cycle II
ARUE_c16790	PWY-5537	pyruvate fermentation to acetate V
ARUE_c16790	PWY-5538	pyruvate fermentation to acetate VI
ARUE_c16790	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c16790	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c16790	PWY-6728	methylaspartate cycle
ARUE_c16790	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c16790	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ARUE_c16820	PWY-7199	pyrimidine deoxyribonucleosides salvage
ARUE_c16860	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ARUE_c16860	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c16860	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c16860	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
ARUE_c16950	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c16950	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c16950	PWY-7560	methylerythritol phosphate pathway II
ARUE_c17000	PWY-1361	benzoyl-CoA degradation I (aerobic)
ARUE_c17000	PWY-5109	2-methylbutanoate biosynthesis
ARUE_c17000	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ARUE_c17000	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ARUE_c17000	PWY-5177	glutaryl-CoA degradation
ARUE_c17000	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ARUE_c17000	PWY-6435	4-hydroxybenzoate biosynthesis V
ARUE_c17000	PWY-6583	pyruvate fermentation to butanol I
ARUE_c17000	PWY-6863	pyruvate fermentation to hexanol
ARUE_c17000	PWY-6883	pyruvate fermentation to butanol II
ARUE_c17000	PWY-6944	androstenedione degradation
ARUE_c17000	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ARUE_c17000	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ARUE_c17000	PWY-7007	methyl ketone biosynthesis
ARUE_c17000	PWY-7046	4-coumarate degradation (anaerobic)
ARUE_c17000	PWY-7094	fatty acid salvage
ARUE_c17000	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ARUE_c17000	PWY-735	jasmonic acid biosynthesis
ARUE_c17000	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ARUE_c17120	PWY-5350	thiosulfate disproportionation III (rhodanese)
ARUE_c17260	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c17260	PWY-5723	Rubisco shunt
ARUE_c17290	PWY-6167	flavin biosynthesis II (archaea)
ARUE_c17290	PWY-6168	flavin biosynthesis III (fungi)
ARUE_c17290	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c17300	PWY-6167	flavin biosynthesis II (archaea)
ARUE_c17300	PWY-6168	flavin biosynthesis III (fungi)
ARUE_c17310	PWY-6168	flavin biosynthesis III (fungi)
ARUE_c17310	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
ARUE_c17320	PWY-6167	flavin biosynthesis II (archaea)
ARUE_c17320	PWY-6168	flavin biosynthesis III (fungi)
ARUE_c17380	PWY-5958	acridone alkaloid biosynthesis
ARUE_c17380	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ARUE_c17380	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ARUE_c17470	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c17470	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ARUE_c17470	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c17470	PWY-5723	Rubisco shunt
ARUE_c17470	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c17470	PWY-6886	1-butanol autotrophic biosynthesis
ARUE_c17470	PWY-6901	superpathway of glucose and xylose degradation
ARUE_c17470	PWY-7003	glycerol degradation to butanol
ARUE_c17470	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
ARUE_c17470	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ARUE_c17880	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ARUE_c17880	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ARUE_c18140	PWY-5101	L-isoleucine biosynthesis II
ARUE_c18140	PWY-5103	L-isoleucine biosynthesis III
ARUE_c18140	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c18140	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c18210	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c18210	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c18410	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c18410	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c18420	PWY-5101	L-isoleucine biosynthesis II
ARUE_c18420	PWY-5103	L-isoleucine biosynthesis III
ARUE_c18420	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c18420	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c18600	PWY-5101	L-isoleucine biosynthesis II
ARUE_c18600	PWY-5103	L-isoleucine biosynthesis III
ARUE_c18600	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c18600	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c18620	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c18620	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c18620	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c18620	PWY-7003	glycerol degradation to butanol
ARUE_c18630	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c18630	PWY-5723	Rubisco shunt
ARUE_c19160	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ARUE_c19160	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ARUE_c19430	PWY-3162	L-tryptophan degradation V (side chain pathway)
ARUE_c19430	PWY-5057	L-valine degradation II
ARUE_c19430	PWY-5076	L-leucine degradation III
ARUE_c19430	PWY-5078	L-isoleucine degradation II
ARUE_c19430	PWY-5079	L-phenylalanine degradation III
ARUE_c19430	PWY-5082	L-methionine degradation III
ARUE_c19430	PWY-5480	pyruvate fermentation to ethanol I
ARUE_c19430	PWY-5486	pyruvate fermentation to ethanol II
ARUE_c19430	PWY-5751	phenylethanol biosynthesis
ARUE_c19430	PWY-6028	acetoin degradation
ARUE_c19430	PWY-6313	serotonin degradation
ARUE_c19430	PWY-6333	acetaldehyde biosynthesis I
ARUE_c19430	PWY-6342	noradrenaline and adrenaline degradation
ARUE_c19430	PWY-6587	pyruvate fermentation to ethanol III
ARUE_c19430	PWY-6802	salidroside biosynthesis
ARUE_c19430	PWY-6871	3-methylbutanol biosynthesis
ARUE_c19430	PWY-7013	L-1,2-propanediol degradation
ARUE_c19430	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c19430	PWY-7118	chitin degradation to ethanol
ARUE_c19430	PWY-7396	butanol and isobutanol biosynthesis (engineered)
ARUE_c19430	PWY-7557	dehydrodiconiferyl alcohol degradation
ARUE_c19560	PWY-1281	sulfoacetaldehyde degradation I
ARUE_c19560	PWY-5482	pyruvate fermentation to acetate II
ARUE_c19560	PWY-5485	pyruvate fermentation to acetate IV
ARUE_c19560	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c19560	PWY-6637	sulfolactate degradation II
ARUE_c19610	PWY-5482	pyruvate fermentation to acetate II
ARUE_c19610	PWY-5485	pyruvate fermentation to acetate IV
ARUE_c19610	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c19750	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ARUE_c19750	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ARUE_c19750	PWY-7242	D-fructuronate degradation
ARUE_c19750	PWY-7310	D-glucosaminate degradation
ARUE_c19910	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ARUE_c19910	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
ARUE_c19910	PWY-6936	seleno-amino acid biosynthesis
ARUE_c19910	PWY-702	L-methionine biosynthesis II
ARUE_c19980	PWY-5506	methanol oxidation to formaldehyde IV
ARUE_c20260	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c20370	PWY-5532	adenosine nucleotides degradation IV
ARUE_c20370	PWY-5723	Rubisco shunt
ARUE_c20450	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c20450	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c20450	PWY-7560	methylerythritol phosphate pathway II
ARUE_c20730	PWY-5642	2,4-dinitrotoluene degradation
ARUE_c20730	PWY-6373	acrylate degradation
ARUE_c20740	PWY-6421	arsenate detoxification III (mycothiol)
ARUE_c21060	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ARUE_c21060	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ARUE_c21080	PWY-5941	glycogen degradation II (eukaryotic)
ARUE_c21080	PWY-6724	starch degradation II
ARUE_c21080	PWY-6737	starch degradation V
ARUE_c21080	PWY-7238	sucrose biosynthesis II
ARUE_c21090	PWY-5692	allantoin degradation to glyoxylate II
ARUE_c21090	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
ARUE_c21170	PWY-7425	2-chloroacrylate degradation I
ARUE_c21330	PWY-5642	2,4-dinitrotoluene degradation
ARUE_c21330	PWY-6373	acrylate degradation
ARUE_c21350	PWY-5940	streptomycin biosynthesis
ARUE_c21350	PWY-7237	<i>myo</i>-, <i>chiro</i>- and <i>scillo</i>-inositol degradation
ARUE_c21350	PWY-7241	<I>myo</I>-inositol degradation II
ARUE_c21480	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ARUE_c21510	PWY-4381	fatty acid biosynthesis initiation I
ARUE_c21740	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ARUE_c21740	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ARUE_c22120	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
ARUE_c22120	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
ARUE_c22440	PWY-6854	ethylene biosynthesis III (microbes)
ARUE_c22450	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c22450	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c22450	PWY-6901	superpathway of glucose and xylose degradation
ARUE_c22450	PWY-7003	glycerol degradation to butanol
ARUE_c22460	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c22460	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c22460	PWY-6886	1-butanol autotrophic biosynthesis
ARUE_c22460	PWY-6901	superpathway of glucose and xylose degradation
ARUE_c22460	PWY-7003	glycerol degradation to butanol
ARUE_c22470	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c22470	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c22470	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c22470	PWY-7003	glycerol degradation to butanol
ARUE_c22480	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ARUE_c22480	PWY-6855	chitin degradation I (archaea)
ARUE_c22480	PWY-6906	chitin derivatives degradation
ARUE_c22500	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ARUE_c22510	PWY-3801	sucrose degradation II (sucrose synthase)
ARUE_c22510	PWY-5054	sorbitol biosynthesis I
ARUE_c22510	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
ARUE_c22510	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ARUE_c22510	PWY-5659	GDP-mannose biosynthesis
ARUE_c22510	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c22510	PWY-621	sucrose degradation III (sucrose invertase)
ARUE_c22510	PWY-622	starch biosynthesis
ARUE_c22510	PWY-6531	mannitol cycle
ARUE_c22510	PWY-6981	chitin biosynthesis
ARUE_c22510	PWY-7238	sucrose biosynthesis II
ARUE_c22510	PWY-7347	sucrose biosynthesis III
ARUE_c22510	PWY-7385	1,3-propanediol biosynthesis (engineered)
ARUE_c22520	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c22520	PWY-5723	Rubisco shunt
ARUE_c22530	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c22530	PWY-5723	Rubisco shunt
ARUE_c22530	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c22530	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c22530	PWY-6901	superpathway of glucose and xylose degradation
ARUE_c22530	PWY-7560	methylerythritol phosphate pathway II
ARUE_c22850	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ARUE_c22850	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
ARUE_c22860	PWY-4061	glutathione-mediated detoxification I
ARUE_c22860	PWY-6842	glutathione-mediated detoxification II
ARUE_c22860	PWY-7112	4-hydroxy-2-nonenal detoxification
ARUE_c22920	PWY-622	starch biosynthesis
ARUE_c22930	PWY-622	starch biosynthesis
ARUE_c22940	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ARUE_c22940	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
ARUE_c22940	PWY-6920	6-gingerol analog biosynthesis
ARUE_c22940	PWY-7007	methyl ketone biosynthesis
ARUE_c22940	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
ARUE_c22940	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
ARUE_c22940	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
ARUE_c22940	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
ARUE_c22940	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
ARUE_c22940	PWY-735	jasmonic acid biosynthesis
ARUE_c23200	PWY-3221	dTDP-L-rhamnose biosynthesis II
ARUE_c23200	PWY-6808	dTDP-D-forosamine biosynthesis
ARUE_c23200	PWY-6942	dTDP-D-desosamine biosynthesis
ARUE_c23200	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ARUE_c23200	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
ARUE_c23200	PWY-6974	dTDP-L-olivose biosynthesis
ARUE_c23200	PWY-6976	dTDP-L-mycarose biosynthesis
ARUE_c23200	PWY-7104	dTDP-L-megosamine biosynthesis
ARUE_c23200	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
ARUE_c23200	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
ARUE_c23200	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
ARUE_c23200	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
ARUE_c23200	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
ARUE_c23200	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
ARUE_c23200	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
ARUE_c23200	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
ARUE_c23210	PWY-3221	dTDP-L-rhamnose biosynthesis II
ARUE_c23210	PWY-6808	dTDP-D-forosamine biosynthesis
ARUE_c23210	PWY-6942	dTDP-D-desosamine biosynthesis
ARUE_c23210	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
ARUE_c23210	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
ARUE_c23210	PWY-6974	dTDP-L-olivose biosynthesis
ARUE_c23210	PWY-6976	dTDP-L-mycarose biosynthesis
ARUE_c23210	PWY-7104	dTDP-L-megosamine biosynthesis
ARUE_c23210	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
ARUE_c23210	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
ARUE_c23210	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
ARUE_c23210	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
ARUE_c23210	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
ARUE_c23210	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
ARUE_c23210	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
ARUE_c23210	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
ARUE_c23280	PWY-6829	tRNA methylation (yeast)
ARUE_c23680	PWY-3781	aerobic respiration I (cytochrome c)
ARUE_c23680	PWY-4521	arsenite oxidation I (respiratory)
ARUE_c23680	PWY-6692	Fe(II) oxidation
ARUE_c23680	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ARUE_c23690	PWY-3781	aerobic respiration I (cytochrome c)
ARUE_c23690	PWY-4521	arsenite oxidation I (respiratory)
ARUE_c23690	PWY-6692	Fe(II) oxidation
ARUE_c23690	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
ARUE_c23740	PWY-5686	UMP biosynthesis
ARUE_c23800	PWY-6871	3-methylbutanol biosynthesis
ARUE_c24020	PWY-4261	glycerol degradation I
ARUE_c24040	PWY-4261	glycerol degradation I
ARUE_c24040	PWY-6118	glycerol-3-phosphate shuttle
ARUE_c24040	PWY-6952	glycerophosphodiester degradation
ARUE_c24140	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
ARUE_c24140	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
ARUE_c24170	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c24190	PWY-5686	UMP biosynthesis
ARUE_c24200	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c24200	PWY-5686	UMP biosynthesis
ARUE_c24200	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ARUE_c24210	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c24210	PWY-5686	UMP biosynthesis
ARUE_c24210	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ARUE_c24230	PWY-5686	UMP biosynthesis
ARUE_c24240	PWY-5686	UMP biosynthesis
ARUE_c24250	PWY-7183	pyrimidine nucleobases salvage I
ARUE_c24300	PWY-6164	3-dehydroquinate biosynthesis I
ARUE_c24310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c24320	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c24330	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c24560	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
ARUE_c24610	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
ARUE_c24880	PWY-5971	palmitate biosynthesis II (bacteria and plants)
ARUE_c24880	PWY-5973	<i>cis</i>-vaccenate biosynthesis
ARUE_c24880	PWY-5989	stearate biosynthesis II (bacteria and plants)
ARUE_c24880	PWY-5994	palmitate biosynthesis I (animals and fungi)
ARUE_c24880	PWY-6113	superpathway of mycolate biosynthesis
ARUE_c24880	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
ARUE_c24880	PWY-6519	8-amino-7-oxononanoate biosynthesis I
ARUE_c24880	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
ARUE_c24880	PWYG-321	mycolate biosynthesis
ARUE_c24930	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ARUE_c24930	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c24930	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ARUE_c24930	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ARUE_c24930	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c24930	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c24930	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c24930	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ARUE_c24940	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ARUE_c24940	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c24940	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ARUE_c24940	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ARUE_c24940	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c24940	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c24940	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c24940	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ARUE_c25160	PWY-5381	pyridine nucleotide cycling (plants)
ARUE_c25160	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ARUE_c25230	PWY-6910	hydroxymethylpyrimidine salvage
ARUE_c25230	PWY-7356	thiamin salvage IV (yeast)
ARUE_c25230	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ARUE_c25260	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
ARUE_c25260	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
ARUE_c25260	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c25260	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c25260	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
ARUE_c25260	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ARUE_c25260	PWY-7205	CMP phosphorylation
ARUE_c25260	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ARUE_c25260	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c25260	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c25260	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c25260	PWY-7224	purine deoxyribonucleosides salvage
ARUE_c25260	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c25260	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
ARUE_c25280	PWY-2161	folate polyglutamylation
ARUE_c25430	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c25430	PWY-5723	Rubisco shunt
ARUE_c25440	PWY-4061	glutathione-mediated detoxification I
ARUE_c25440	PWY-6842	glutathione-mediated detoxification II
ARUE_c25440	PWY-7112	4-hydroxy-2-nonenal detoxification
ARUE_c25660	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c25660	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c25660	PWY-6901	superpathway of glucose and xylose degradation
ARUE_c25660	PWY-7003	glycerol degradation to butanol
ARUE_c25690	PWY-5663	tetrahydrobiopterin biosynthesis I
ARUE_c25690	PWY-5664	tetrahydrobiopterin biosynthesis II
ARUE_c25690	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
ARUE_c25690	PWY-6703	preQ<sub>0</sub> biosynthesis
ARUE_c25690	PWY-6983	tetrahydrobiopterin biosynthesis III
ARUE_c25690	PWY-7442	drosopterin and aurodrosopterin biosynthesis
ARUE_c25710	PWY-6936	seleno-amino acid biosynthesis
ARUE_c25720	PWY-6936	seleno-amino acid biosynthesis
ARUE_c25720	PWY-7274	D-cycloserine biosynthesis
ARUE_c25880	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c25880	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c25880	PWY-7560	methylerythritol phosphate pathway II
ARUE_c25910	PWY-4381	fatty acid biosynthesis initiation I
ARUE_c26040	PWY-6829	tRNA methylation (yeast)
ARUE_c26040	PWY-7285	methylwyosine biosynthesis
ARUE_c26040	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
ARUE_c26090	PWY-5386	methylglyoxal degradation I
ARUE_c26110	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
ARUE_c26140	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ARUE_c26340	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ARUE_c26340	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ARUE_c26340	PWY-6896	thiamin salvage I
ARUE_c26340	PWY-6897	thiamin salvage II
ARUE_c26360	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c26360	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c26370	PWY-5667	CDP-diacylglycerol biosynthesis I
ARUE_c26370	PWY-5981	CDP-diacylglycerol biosynthesis III
ARUE_c26390	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c26390	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c26490	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ARUE_c26520	PWY-5057	L-valine degradation II
ARUE_c26520	PWY-5076	L-leucine degradation III
ARUE_c26520	PWY-5078	L-isoleucine degradation II
ARUE_c26520	PWY-5101	L-isoleucine biosynthesis II
ARUE_c26520	PWY-5103	L-isoleucine biosynthesis III
ARUE_c26520	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c26520	PWY-5108	L-isoleucine biosynthesis V
ARUE_c26530	PWY-7396	butanol and isobutanol biosynthesis (engineered)
ARUE_c26620	PWY-5101	L-isoleucine biosynthesis II
ARUE_c26620	PWY-5103	L-isoleucine biosynthesis III
ARUE_c26620	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c26620	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c26630	PWY-5101	L-isoleucine biosynthesis II
ARUE_c26630	PWY-5103	L-isoleucine biosynthesis III
ARUE_c26630	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c26630	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
ARUE_c26630	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
ARUE_c26630	PWY-6389	(<i>S</i>)-acetoin biosynthesis
ARUE_c26630	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c26640	PWY-5101	L-isoleucine biosynthesis II
ARUE_c26640	PWY-5103	L-isoleucine biosynthesis III
ARUE_c26640	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c26640	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
ARUE_c26640	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
ARUE_c26640	PWY-6389	(<i>S</i>)-acetoin biosynthesis
ARUE_c26640	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c26650	PWY-5101	L-isoleucine biosynthesis II
ARUE_c26650	PWY-5103	L-isoleucine biosynthesis III
ARUE_c26650	PWY-5104	L-isoleucine biosynthesis IV
ARUE_c26650	PWY-7111	pyruvate fermentation to isobutanol (engineered)
ARUE_c26750	PWY-7254	TCA cycle VII (acetate-producers)
ARUE_c26860	PWY-6823	molybdenum cofactor biosynthesis
ARUE_c26860	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c26860	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c26860	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
ARUE_c26870	PWY-5316	nicotine biosynthesis
ARUE_c26870	PWY-5381	pyridine nucleotide cycling (plants)
ARUE_c26870	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
ARUE_c26870	PWY-7342	superpathway of nicotine biosynthesis
ARUE_c26890	PWY-5316	nicotine biosynthesis
ARUE_c26890	PWY-7342	superpathway of nicotine biosynthesis
ARUE_c27240	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
ARUE_c27270	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c27270	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c27300	PWY-5381	pyridine nucleotide cycling (plants)
ARUE_c27340	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ARUE_c27340	PWY-6855	chitin degradation I (archaea)
ARUE_c27340	PWY-6906	chitin derivatives degradation
ARUE_c27440	PWY-6906	chitin derivatives degradation
ARUE_c27440	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
ARUE_c27440	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
ARUE_c27500	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c27520	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c27590	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
ARUE_c27590	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
ARUE_c27590	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
ARUE_c27650	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c27660	PWY-702	L-methionine biosynthesis II
ARUE_c27690	PWY-2941	L-lysine biosynthesis II
ARUE_c27690	PWY-2942	L-lysine biosynthesis III
ARUE_c27690	PWY-5097	L-lysine biosynthesis VI
ARUE_c27830	PWY-5350	thiosulfate disproportionation III (rhodanese)
ARUE_c27920	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
ARUE_c28000	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c28320	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
ARUE_c28320	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
ARUE_c28390	PWY-5022	4-aminobutanoate degradation V
ARUE_c28390	PWY-6728	methylaspartate cycle
ARUE_c28390	PWY-7126	ethylene biosynthesis IV
ARUE_c28590	PWY-3461	L-tyrosine biosynthesis II
ARUE_c28590	PWY-3462	L-phenylalanine biosynthesis II
ARUE_c28590	PWY-6120	L-tyrosine biosynthesis III
ARUE_c28590	PWY-6627	salinosporamide A biosynthesis
ARUE_c28660	PWY-6823	molybdenum cofactor biosynthesis
ARUE_c28660	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c28660	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c28660	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
ARUE_c28750	PWY-5530	sorbitol biosynthesis II
ARUE_c28750	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c28900	PWY-5381	pyridine nucleotide cycling (plants)
ARUE_c29000	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ARUE_c29020	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ARUE_c29020	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ARUE_c29030	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ARUE_c29030	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ARUE_c29040	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ARUE_c29040	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
ARUE_c29070	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
ARUE_c29070	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
ARUE_c29080	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
ARUE_c29080	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
ARUE_c29090	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
ARUE_c29140	PWY-7158	L-phenylalanine degradation V
ARUE_c29150	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c29150	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c29180	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
ARUE_c29180	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
ARUE_c29180	PWY-6897	thiamin salvage II
ARUE_c29180	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
ARUE_c29180	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
ARUE_c29180	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
ARUE_c29180	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
ARUE_c29470	PWY-3821	galactose degradation III
ARUE_c29470	PWY-6317	galactose degradation I (Leloir pathway)
ARUE_c29470	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
ARUE_c29470	PWY-6527	stachyose degradation
ARUE_c29470	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
ARUE_c29470	PWY-7344	UDP-D-galactose biosynthesis
ARUE_c29620	PWY-7560	methylerythritol phosphate pathway II
ARUE_c29750	PWY-6807	xyloglucan degradation II (exoglucanase)
ARUE_c29780	PWY-723	alkylnitronates degradation
ARUE_c30050	PWY-3801	sucrose degradation II (sucrose synthase)
ARUE_c30050	PWY-6527	stachyose degradation
ARUE_c30050	PWY-6981	chitin biosynthesis
ARUE_c30050	PWY-7238	sucrose biosynthesis II
ARUE_c30050	PWY-7343	UDP-glucose biosynthesis
ARUE_c30100	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c30140	PWY-4261	glycerol degradation I
ARUE_c30140	PWY-6118	glycerol-3-phosphate shuttle
ARUE_c30140	PWY-6952	glycerophosphodiester degradation
ARUE_c30200	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
ARUE_c30200	PWY-6596	adenosine nucleotides degradation I
ARUE_c30200	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c30300	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c30320	PWY-6840	homoglutathione biosynthesis
ARUE_c30320	PWY-7255	ergothioneine biosynthesis I (bacteria)
ARUE_c30380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ARUE_c30430	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
ARUE_c30430	PWY-2161	folate polyglutamylation
ARUE_c30430	PWY-2201	folate transformations I
ARUE_c30430	PWY-3841	folate transformations II
ARUE_c30440	PWY-2301	<i>myo</i>-inositol biosynthesis
ARUE_c30440	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
ARUE_c30440	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
ARUE_c30440	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
ARUE_c30440	PWY-6664	di-myo-inositol phosphate biosynthesis
ARUE_c30460	PWY-2661	trehalose biosynthesis V
ARUE_c30470	PWY-2661	trehalose biosynthesis V
ARUE_c30490	PWY-6938	NADH repair
ARUE_c30500	PWY-6012	acyl carrier protein metabolism I
ARUE_c30500	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
ARUE_c30510	PWY-6749	CMP-legionaminate biosynthesis I
ARUE_c30520	PWY-3961	phosphopantothenate biosynthesis II
ARUE_c30540	PWY-6749	CMP-legionaminate biosynthesis I
ARUE_c30720	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c30770	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c30990	PWY-3121	linamarin degradation
ARUE_c30990	PWY-5176	coumarin biosynthesis (via 2-coumarate)
ARUE_c30990	PWY-6002	lotaustralin degradation
ARUE_c30990	PWY-6788	cellulose degradation II (fungi)
ARUE_c30990	PWY-7089	taxiphyllin bioactivation
ARUE_c30990	PWY-7091	linustatin bioactivation
ARUE_c30990	PWY-7092	neolinustatin bioactivation
ARUE_c31240	PWY-1042	glycolysis IV (plant cytosol)
ARUE_c31240	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c31240	PWY-5484	glycolysis II (from fructose 6-phosphate)
ARUE_c31240	PWY-7385	1,3-propanediol biosynthesis (engineered)
ARUE_c31400	PWY-3841	folate transformations II
ARUE_c31400	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
ARUE_c31400	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c31400	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
ARUE_c31400	PWY-7199	pyrimidine deoxyribonucleosides salvage
ARUE_c31400	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
ARUE_c31410	PWY-3841	folate transformations II
ARUE_c31410	PWY-6614	tetrahydrofolate biosynthesis
ARUE_c31430	PWY-2941	L-lysine biosynthesis II
ARUE_c31430	PWY-2942	L-lysine biosynthesis III
ARUE_c31430	PWY-5097	L-lysine biosynthesis VI
ARUE_c31430	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
ARUE_c31430	PWY-6559	spermidine biosynthesis II
ARUE_c31430	PWY-6562	norspermidine biosynthesis
ARUE_c31430	PWY-7153	grixazone biosynthesis
ARUE_c31430	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
ARUE_c31470	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c31470	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c31820	PWY-6807	xyloglucan degradation II (exoglucanase)
ARUE_c31870	PWY-801	L-homocysteine and L-cysteine interconversion
ARUE_c32080	PWY-5506	methanol oxidation to formaldehyde IV
ARUE_c32250	PWY-5194	siroheme biosynthesis
ARUE_c32250	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ARUE_c32380	PWY-5278	sulfite oxidation III
ARUE_c32380	PWY-5340	sulfate activation for sulfonation
ARUE_c32380	PWY-6683	sulfate reduction III (assimilatory)
ARUE_c32380	PWY-6932	selenate reduction
ARUE_c32390	PWY-5278	sulfite oxidation III
ARUE_c32390	PWY-5340	sulfate activation for sulfonation
ARUE_c32390	PWY-6683	sulfate reduction III (assimilatory)
ARUE_c32390	PWY-6932	selenate reduction
ARUE_c32410	PWY-6683	sulfate reduction III (assimilatory)
ARUE_c32490	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
ARUE_c32550	PWY-5839	menaquinol-7 biosynthesis
ARUE_c32550	PWY-5844	menaquinol-9 biosynthesis
ARUE_c32550	PWY-5849	menaquinol-6 biosynthesis
ARUE_c32550	PWY-5890	menaquinol-10 biosynthesis
ARUE_c32550	PWY-5891	menaquinol-11 biosynthesis
ARUE_c32550	PWY-5892	menaquinol-12 biosynthesis
ARUE_c32550	PWY-5895	menaquinol-13 biosynthesis
ARUE_c32560	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
ARUE_c32560	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
ARUE_c32560	PWY-5901	2,3-dihydroxybenzoate biosynthesis
ARUE_c32560	PWY-6406	salicylate biosynthesis I
ARUE_c32600	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
ARUE_c32600	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
ARUE_c32630	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
ARUE_c32630	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
ARUE_c32680	PWY-621	sucrose degradation III (sucrose invertase)
ARUE_c33120	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
ARUE_c33120	PWY-5739	GDP-D-perosamine biosynthesis
ARUE_c33120	PWY-5740	GDP-L-colitose biosynthesis
ARUE_c33120	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
ARUE_c33130	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
ARUE_c33150	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
ARUE_c33810	PWY-1341	phenylacetate degradation II (anaerobic)
ARUE_c33810	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
ARUE_c33960	PWY-1361	benzoyl-CoA degradation I (aerobic)
ARUE_c33960	PWY-5109	2-methylbutanoate biosynthesis
ARUE_c33960	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
ARUE_c33960	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
ARUE_c33960	PWY-5177	glutaryl-CoA degradation
ARUE_c33960	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
ARUE_c33960	PWY-6435	4-hydroxybenzoate biosynthesis V
ARUE_c33960	PWY-6583	pyruvate fermentation to butanol I
ARUE_c33960	PWY-6863	pyruvate fermentation to hexanol
ARUE_c33960	PWY-6883	pyruvate fermentation to butanol II
ARUE_c33960	PWY-6944	androstenedione degradation
ARUE_c33960	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ARUE_c33960	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ARUE_c33960	PWY-7007	methyl ketone biosynthesis
ARUE_c33960	PWY-7046	4-coumarate degradation (anaerobic)
ARUE_c33960	PWY-7094	fatty acid salvage
ARUE_c33960	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
ARUE_c33960	PWY-735	jasmonic acid biosynthesis
ARUE_c33960	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
ARUE_c34030	PWY-6683	sulfate reduction III (assimilatory)
ARUE_c34130	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
ARUE_c34130	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
ARUE_c34150	PWY-5839	menaquinol-7 biosynthesis
ARUE_c34150	PWY-5851	demethylmenaquinol-9 biosynthesis
ARUE_c34150	PWY-5852	demethylmenaquinol-8 biosynthesis I
ARUE_c34150	PWY-5853	demethylmenaquinol-6 biosynthesis I
ARUE_c34150	PWY-5890	menaquinol-10 biosynthesis
ARUE_c34150	PWY-5891	menaquinol-11 biosynthesis
ARUE_c34150	PWY-5892	menaquinol-12 biosynthesis
ARUE_c34150	PWY-5895	menaquinol-13 biosynthesis
ARUE_c34380	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
ARUE_c34380	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
ARUE_c34380	PWY-6164	3-dehydroquinate biosynthesis I
ARUE_c34460	PWY-6807	xyloglucan degradation II (exoglucanase)
ARUE_c34660	PWY-3341	L-proline biosynthesis III
ARUE_c34660	PWY-4981	L-proline biosynthesis II (from arginine)
ARUE_c34660	PWY-6344	L-ornithine degradation II (Stickland reaction)
ARUE_c34910	PWY-6672	<i>cis</i>-genanyl-CoA degradation
ARUE_c34910	PWY-7118	chitin degradation to ethanol
ARUE_c35000	PWY-6527	stachyose degradation
ARUE_c35010	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c35010	PWY-6416	quinate degradation II
ARUE_c35010	PWY-6707	gallate biosynthesis
ARUE_c35100	PWY-4381	fatty acid biosynthesis initiation I
ARUE_c35180	PWY-6123	inosine-5'-phosphate biosynthesis I
ARUE_c35180	PWY-6124	inosine-5'-phosphate biosynthesis II
ARUE_c35180	PWY-7234	inosine-5'-phosphate biosynthesis III
ARUE_c35190	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ARUE_c35190	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ARUE_c35190	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ARUE_c35240	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c35240	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c35260	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c35260	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c35260	PWY-7560	methylerythritol phosphate pathway II
ARUE_c35390	PWY-5691	urate degradation to allantoin I
ARUE_c35440	PWY-6728	methylaspartate cycle
ARUE_c35440	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c35440	PWY-7118	chitin degradation to ethanol
ARUE_c35440	PWY-7294	xylose degradation IV
ARUE_c35440	PWY-7295	L-arabinose degradation IV
ARUE_c35460	PWY-5692	allantoin degradation to glyoxylate II
ARUE_c35460	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
ARUE_c35510	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c35510	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c35580	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
ARUE_c35580	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
ARUE_c35580	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
ARUE_c35580	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
ARUE_c35630	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c35810	PWY-5506	methanol oxidation to formaldehyde IV
ARUE_c35980	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ARUE_c35980	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ARUE_c35980	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
ARUE_c36000	PWY-4041	&gamma;-glutamyl cycle
ARUE_c36000	PWY-5826	hypoglycin biosynthesis
ARUE_c36360	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
ARUE_c36360	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
ARUE_c36440	PWY-6832	2-aminoethylphosphonate degradation II
ARUE_c36480	PWY-5691	urate degradation to allantoin I
ARUE_c36480	PWY-7394	urate degradation to allantoin II
ARUE_c36490	PWY-5691	urate degradation to allantoin I
ARUE_c36490	PWY-7394	urate degradation to allantoin II
ARUE_c36510	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ARUE_c36510	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ARUE_c36510	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ARUE_c36510	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ARUE_c36520	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
ARUE_c36520	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
ARUE_c36520	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
ARUE_c36580	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
ARUE_c36580	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
ARUE_c36630	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c36630	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c37020	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
ARUE_c37030	PWY-43	putrescine biosynthesis II
ARUE_c37120	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c37120	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c37120	PWY-7560	methylerythritol phosphate pathway II
ARUE_c37380	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
ARUE_c37380	PWY-6855	chitin degradation I (archaea)
ARUE_c37380	PWY-6906	chitin derivatives degradation
ARUE_c37400	PWY-6825	phosphatidylcholine biosynthesis V
ARUE_c37610	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
ARUE_c37880	PWY-5958	acridone alkaloid biosynthesis
ARUE_c37880	PWY-6543	4-aminobenzoate biosynthesis
ARUE_c37880	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
ARUE_c37880	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
ARUE_c37880	PWY-6722	candicidin biosynthesis
ARUE_c38010	PWY-6840	homoglutathione biosynthesis
ARUE_c38010	PWY-7255	ergothioneine biosynthesis I (bacteria)
ARUE_c38020	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c38020	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c38200	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
ARUE_c38400	PWY-4261	glycerol degradation I
ARUE_c38420	PWY-4261	glycerol degradation I
ARUE_c38530	PWY-5155	&beta;-alanine biosynthesis III
ARUE_c39280	PWY-5392	reductive TCA cycle II
ARUE_c39280	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
ARUE_c39280	PWY-5690	TCA cycle II (plants and fungi)
ARUE_c39280	PWY-5913	TCA cycle VI (obligate autotrophs)
ARUE_c39280	PWY-6728	methylaspartate cycle
ARUE_c39280	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
ARUE_c39280	PWY-7254	TCA cycle VII (acetate-producers)
ARUE_c39280	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
ARUE_c39610	PWY-1622	formaldehyde assimilation I (serine pathway)
ARUE_c39610	PWY-181	photorespiration
ARUE_c39610	PWY-2161	folate polyglutamylation
ARUE_c39610	PWY-2201	folate transformations I
ARUE_c39610	PWY-3661	glycine betaine degradation I
ARUE_c39610	PWY-3661-1	glycine betaine degradation II (mammalian)
ARUE_c39610	PWY-3841	folate transformations II
ARUE_c39610	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c39620	PWY-3661	glycine betaine degradation I
ARUE_c39620	PWY-4722	creatinine degradation II
ARUE_c39630	PWY-3661	glycine betaine degradation I
ARUE_c39630	PWY-4722	creatinine degradation II
ARUE_c39640	PWY-3661	glycine betaine degradation I
ARUE_c39640	PWY-4722	creatinine degradation II
ARUE_c39650	PWY-3661	glycine betaine degradation I
ARUE_c39650	PWY-4722	creatinine degradation II
ARUE_c39670	PWY-2201	folate transformations I
ARUE_c39670	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c39790	PWY-5028	L-histidine degradation II
ARUE_c39790	PWY-5030	L-histidine degradation III
ARUE_c40020	PWY-7310	D-glucosaminate degradation
ARUE_c40410	PWY-6123	inosine-5'-phosphate biosynthesis I
ARUE_c40410	PWY-6124	inosine-5'-phosphate biosynthesis II
ARUE_c40410	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c40410	PWY-7234	inosine-5'-phosphate biosynthesis III
ARUE_c41120	PWY-4321	L-glutamate degradation IV
ARUE_c41420	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
ARUE_c41420	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
ARUE_c41420	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
ARUE_c41440	PWY-1622	formaldehyde assimilation I (serine pathway)
ARUE_c41440	PWY-181	photorespiration
ARUE_c41440	PWY-2161	folate polyglutamylation
ARUE_c41440	PWY-2201	folate transformations I
ARUE_c41440	PWY-3661	glycine betaine degradation I
ARUE_c41440	PWY-3661-1	glycine betaine degradation II (mammalian)
ARUE_c41440	PWY-3841	folate transformations II
ARUE_c41440	PWY-5497	purine nucleobases degradation II (anaerobic)
ARUE_c41490	PWY-40	putrescine biosynthesis I
ARUE_c41490	PWY-6305	putrescine biosynthesis IV
ARUE_c41520	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
ARUE_c41520	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
ARUE_c41850	PWY-6123	inosine-5'-phosphate biosynthesis I
ARUE_c41850	PWY-6124	inosine-5'-phosphate biosynthesis II
ARUE_c41850	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
ARUE_c41850	PWY-7234	inosine-5'-phosphate biosynthesis III
ARUE_c41890	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
ARUE_c42030	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
ARUE_c42030	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
ARUE_c42030	PWY-7242	D-fructuronate degradation
ARUE_c42030	PWY-7310	D-glucosaminate degradation
ARUE_c42050	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
ARUE_c42200	PWY-2582	brassinosteroid biosynthesis II
ARUE_c42200	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
ARUE_c42200	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
ARUE_c42200	PWY-6948	sitosterol degradation to androstenedione
ARUE_c42200	PWY-699	brassinosteroid biosynthesis I
ARUE_c42200	PWY-7299	progesterone biosynthesis
ARUE_c42250	PWY-6807	xyloglucan degradation II (exoglucanase)
ARUE_c42340	PWY-6902	chitin degradation II
ARUE_c42590	PWY-6891	thiazole biosynthesis II (Bacillus)
ARUE_c42590	PWY-6892	thiazole biosynthesis I (E. coli)
ARUE_c42590	PWY-7560	methylerythritol phosphate pathway II
ARUE_c42640	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
ARUE_c42640	PWY-5723	Rubisco shunt
ARUE_c43060	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
ARUE_c43060	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
ARUE_c43060	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
