NIES39_A00040	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
NIES39_A00040	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
NIES39_A00060	PWY-5162	2-oxopentenoate degradation
NIES39_A00300	PWY-5757	fosfomycin biosynthesis
NIES39_A00300	PWY-6322	phosphinothricin tripeptide biosynthesis
NIES39_A00300	PWY-6682	dehydrophos biosynthesis
NIES39_A00300	PWY-6839	2-aminoethylphosphonate biosynthesis
NIES39_A00300	PWY-7510	rhizocticin A and B biosynthesis
NIES39_A00310	PWY-5757	fosfomycin biosynthesis
NIES39_A00310	PWY-6322	phosphinothricin tripeptide biosynthesis
NIES39_A00310	PWY-6682	dehydrophos biosynthesis
NIES39_A00310	PWY-6839	2-aminoethylphosphonate biosynthesis
NIES39_A00310	PWY-7419	FR-900098 and FR-33289 antibiotics biosynthesis
NIES39_A00310	PWY-7510	rhizocticin A and B biosynthesis
NIES39_A00860	PWY-4921	protein citrullination
NIES39_A01060	PWY-6871	3-methylbutanol biosynthesis
NIES39_A01170	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_A01170	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_A01370	PWY-3461	L-tyrosine biosynthesis II
NIES39_A01370	PWY-3462	L-phenylalanine biosynthesis II
NIES39_A01370	PWY-6120	L-tyrosine biosynthesis III
NIES39_A01370	PWY-6627	salinosporamide A biosynthesis
NIES39_A01400	PWY-2661	trehalose biosynthesis V
NIES39_A01410	PWY-2661	trehalose biosynthesis V
NIES39_A01570	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
NIES39_A01570	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
NIES39_A01630	PWY-6519	8-amino-7-oxononanoate biosynthesis I
NIES39_A01630	PWY-6578	8-amino-7-oxononanoate biosynthesis III
NIES39_A01630	PWY-7147	8-amino-7-oxononanoate biosynthesis II
NIES39_A01770	PWY-5340	sulfate activation for sulfonation
NIES39_A01850	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
NIES39_A01860	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_A02060	PWY-6123	inosine-5'-phosphate biosynthesis I
NIES39_A02060	PWY-6124	inosine-5'-phosphate biosynthesis II
NIES39_A02060	PWY-7234	inosine-5'-phosphate biosynthesis III
NIES39_A02630	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
NIES39_A02970	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
NIES39_A03300	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NIES39_A03300	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
NIES39_A03300	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_A03300	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_A03300	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
NIES39_A03300	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NIES39_A03300	PWY-7205	CMP phosphorylation
NIES39_A03300	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NIES39_A03300	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_A03300	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_A03300	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_A03300	PWY-7224	purine deoxyribonucleosides salvage
NIES39_A03300	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_A03300	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
NIES39_A03410	PWY-622	starch biosynthesis
NIES39_A03510	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
NIES39_A03580	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
NIES39_A03580	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
NIES39_A03760	PWY-6502	oxidized GTP and dGTP detoxification
NIES39_A04050	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
NIES39_A04090	PWY-5686	UMP biosynthesis
NIES39_A04130	PWY-5480	pyruvate fermentation to ethanol I
NIES39_A04130	PWY-5485	pyruvate fermentation to acetate IV
NIES39_A04130	PWY-5493	reductive monocarboxylic acid cycle
NIES39_A04250	PWY-5941	glycogen degradation II (eukaryotic)
NIES39_A04250	PWY-6724	starch degradation II
NIES39_A04250	PWY-6737	starch degradation V
NIES39_A04250	PWY-7238	sucrose biosynthesis II
NIES39_A04300	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_A04860	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
NIES39_A04860	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
NIES39_A04890	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
NIES39_A04890	PWY-622	starch biosynthesis
NIES39_A05160	PWY-5316	nicotine biosynthesis
NIES39_A05160	PWY-7342	superpathway of nicotine biosynthesis
NIES39_A05310	PWY-5269	cardiolipin biosynthesis II
NIES39_A05310	PWY-5668	cardiolipin biosynthesis I
NIES39_A05350	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
NIES39_A05350	PWY-622	starch biosynthesis
NIES39_A05430	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NIES39_A05590	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_A05590	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_A06180	PWY-5659	GDP-mannose biosynthesis
NIES39_A06180	PWY-6073	alginate biosynthesis I (algal)
NIES39_A06180	PWY-6082	alginate biosynthesis II (bacterial)
NIES39_A06180	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
NIES39_A06450	PWY-6454	vancomycin resistance I
NIES39_A06450	PWY-6455	vancomycin resistance II
NIES39_A06520	PWY-3781	aerobic respiration I (cytochrome c)
NIES39_A06520	PWY-4302	aerobic respiration III (alternative oxidase pathway)
NIES39_A06520	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
NIES39_A06520	PWY-6692	Fe(II) oxidation
NIES39_A06600	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_A06600	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_A06770	PWY-5278	sulfite oxidation III
NIES39_A06770	PWY-5340	sulfate activation for sulfonation
NIES39_A06770	PWY-6683	sulfate reduction III (assimilatory)
NIES39_A06770	PWY-6932	selenate reduction
NIES39_A07250	PWY-6683	sulfate reduction III (assimilatory)
NIES39_A07360	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
NIES39_A07360	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
NIES39_A07360	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
NIES39_A07410	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_A07410	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_A07430	PWY-6823	molybdenum cofactor biosynthesis
NIES39_A07430	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_A07430	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_A07430	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
NIES39_A07560	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
NIES39_A07560	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
NIES39_A07560	PWY-6936	seleno-amino acid biosynthesis
NIES39_A07560	PWY-702	L-methionine biosynthesis II
NIES39_A07730	PWY-5686	UMP biosynthesis
NIES39_A07760	PWY-7560	methylerythritol phosphate pathway II
NIES39_A08180	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NIES39_A08180	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NIES39_A08180	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NIES39_A08190	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NIES39_A08190	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NIES39_A08190	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NIES39_A08190	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
NIES39_A08250	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_A08350	PWY-6823	molybdenum cofactor biosynthesis
NIES39_A08350	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_A08350	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_A08350	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
NIES39_A08370	PWY-5381	pyridine nucleotide cycling (plants)
NIES39_A08370	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
NIES39_B00170	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_B00580	PWY-5663	tetrahydrobiopterin biosynthesis I
NIES39_B00580	PWY-5664	tetrahydrobiopterin biosynthesis II
NIES39_B00580	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
NIES39_B00580	PWY-6703	preQ<sub>0</sub> biosynthesis
NIES39_B00580	PWY-6983	tetrahydrobiopterin biosynthesis III
NIES39_B00580	PWY-7442	drosopterin and aurodrosopterin biosynthesis
NIES39_B00750	PWY-5497	purine nucleobases degradation II (anaerobic)
NIES39_B00750	PWY-6606	guanosine nucleotides degradation II
NIES39_B00750	PWY-6608	guanosine nucleotides degradation III
NIES39_B00750	PWY-7442	drosopterin and aurodrosopterin biosynthesis
NIES39_B00800	PWY-5839	menaquinol-7 biosynthesis
NIES39_B00800	PWY-5844	menaquinol-9 biosynthesis
NIES39_B00800	PWY-5849	menaquinol-6 biosynthesis
NIES39_B00800	PWY-5890	menaquinol-10 biosynthesis
NIES39_B00800	PWY-5891	menaquinol-11 biosynthesis
NIES39_B00800	PWY-5892	menaquinol-12 biosynthesis
NIES39_B00800	PWY-5895	menaquinol-13 biosynthesis
NIES39_B00890	PWY-7396	butanol and isobutanol biosynthesis (engineered)
NIES39_B00940	PWY-5316	nicotine biosynthesis
NIES39_B00940	PWY-7342	superpathway of nicotine biosynthesis
NIES39_B01040	PWY-1042	glycolysis IV (plant cytosol)
NIES39_B01040	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
NIES39_B01040	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_B01040	PWY-5723	Rubisco shunt
NIES39_B01040	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NIES39_B01040	PWY-6886	1-butanol autotrophic biosynthesis
NIES39_B01040	PWY-6901	superpathway of glucose and xylose degradation
NIES39_B01040	PWY-7003	glycerol degradation to butanol
NIES39_B01040	PWY-7124	ethylene biosynthesis V (engineered)
NIES39_B01040	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
NIES39_C00110	PWY-6654	phosphopantothenate biosynthesis III
NIES39_C00120	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
NIES39_C00120	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
NIES39_C00250	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_C00250	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_C00260	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_C00260	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_C00270	PWY-1042	glycolysis IV (plant cytosol)
NIES39_C00270	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_C00270	PWY-6901	superpathway of glucose and xylose degradation
NIES39_C00270	PWY-7003	glycerol degradation to butanol
NIES39_C00280	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
NIES39_C00280	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
NIES39_C00280	PWY-6896	thiamin salvage I
NIES39_C00280	PWY-6897	thiamin salvage II
NIES39_C00290	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
NIES39_C00290	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
NIES39_C00290	PWY-5901	2,3-dihydroxybenzoate biosynthesis
NIES39_C00290	PWY-6406	salicylate biosynthesis I
NIES39_C00580	PWY-5101	L-isoleucine biosynthesis II
NIES39_C00580	PWY-5103	L-isoleucine biosynthesis III
NIES39_C00580	PWY-5104	L-isoleucine biosynthesis IV
NIES39_C00580	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
NIES39_C00580	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
NIES39_C00580	PWY-6389	(<i>S</i>)-acetoin biosynthesis
NIES39_C00580	PWY-7111	pyruvate fermentation to isobutanol (engineered)
NIES39_C00720	PWY-5686	UMP biosynthesis
NIES39_C00790	PWY-4983	L-citrulline-nitric oxide cycle
NIES39_C00790	PWY-4984	urea cycle
NIES39_C00790	PWY-5	canavanine biosynthesis
NIES39_C00790	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NIES39_C00790	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NIES39_C01150	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_C01150	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_C01300	PWY-5386	methylglyoxal degradation I
NIES39_C01770	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_C01770	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_C01820	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
NIES39_C01820	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
NIES39_C01820	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
NIES39_C02140	PWY-5068	chlorophyll cycle
NIES39_C02140	PWY-5086	chlorophyll <i>a</i> biosynthesis I
NIES39_C02370	PWY-2582	brassinosteroid biosynthesis II
NIES39_C02370	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
NIES39_C02370	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
NIES39_C02370	PWY-6948	sitosterol degradation to androstenedione
NIES39_C02370	PWY-699	brassinosteroid biosynthesis I
NIES39_C02370	PWY-7299	progesterone biosynthesis
NIES39_C02380	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
NIES39_C02380	PWY-6853	ethylene biosynthesis II (microbes)
NIES39_C02380	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
NIES39_C02430	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
NIES39_C02430	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
NIES39_C02510	PWY-6700	queuosine biosynthesis
NIES39_C02750	PWY-5971	palmitate biosynthesis II (bacteria and plants)
NIES39_C02750	PWY-5973	<i>cis</i>-vaccenate biosynthesis
NIES39_C02750	PWY-5989	stearate biosynthesis II (bacteria and plants)
NIES39_C02750	PWY-6113	superpathway of mycolate biosynthesis
NIES39_C02750	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
NIES39_C02750	PWY-6519	8-amino-7-oxononanoate biosynthesis I
NIES39_C02750	PWY-7096	triclosan resistance
NIES39_C02750	PWYG-321	mycolate biosynthesis
NIES39_C02820	PWY-6938	NADH repair
NIES39_C02880	PWY-5194	siroheme biosynthesis
NIES39_C02880	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_C03140	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
NIES39_C03140	PWY-5940	streptomycin biosynthesis
NIES39_C03380	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
NIES39_C03380	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
NIES39_C03400	PWY-40	putrescine biosynthesis I
NIES39_C03400	PWY-6305	putrescine biosynthesis IV
NIES39_C03550	PWY-5747	2-methylcitrate cycle II
NIES39_C04000	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
NIES39_C04000	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
NIES39_C04000	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
NIES39_C04240	PWY-5101	L-isoleucine biosynthesis II
NIES39_C04240	PWY-5103	L-isoleucine biosynthesis III
NIES39_C04240	PWY-5104	L-isoleucine biosynthesis IV
NIES39_C04240	PWY-7111	pyruvate fermentation to isobutanol (engineered)
NIES39_C04430	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NIES39_C04430	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NIES39_C04430	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NIES39_C04440	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NIES39_C04440	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NIES39_C04440	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NIES39_C04490	PWY-5917	phycocyanobilin biosynthesis
NIES39_C05040	PWY-6475	<i>trans</i>-lycopene biosynthesis II (plants)
NIES39_C05050	PWY-7183	pyrimidine nucleobases salvage I
NIES39_C05350	PWY-6823	molybdenum cofactor biosynthesis
NIES39_C05350	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_C05350	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_C05350	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
NIES39_D00150	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_D00230	PWY-2941	L-lysine biosynthesis II
NIES39_D00230	PWY-2942	L-lysine biosynthesis III
NIES39_D00230	PWY-5097	L-lysine biosynthesis VI
NIES39_D00310	PWY-5988	wound-induced proteolysis I
NIES39_D00310	PWY-6018	seed germination protein turnover
NIES39_D00420	PWY-6605	adenine and adenosine salvage II
NIES39_D00420	PWY-6610	adenine and adenosine salvage IV
NIES39_D00530	PWY-7158	L-phenylalanine degradation V
NIES39_D00640	PWY-2301	<i>myo</i>-inositol biosynthesis
NIES39_D00640	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
NIES39_D00640	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
NIES39_D00640	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
NIES39_D00640	PWY-6664	di-myo-inositol phosphate biosynthesis
NIES39_D00890	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
NIES39_D00890	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
NIES39_D00890	PWY-6269	adenosylcobalamin salvage from cobinamide II
NIES39_D00990	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
NIES39_D00990	PWY-5739	GDP-D-perosamine biosynthesis
NIES39_D00990	PWY-5740	GDP-L-colitose biosynthesis
NIES39_D00990	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
NIES39_D01000	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
NIES39_D01090	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_D01090	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_D02090	PWY-6749	CMP-legionaminate biosynthesis I
NIES39_D02270	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
NIES39_D02270	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
NIES39_D02570	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_D02570	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_D02700	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_D02700	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_D02980	PWY-6123	inosine-5'-phosphate biosynthesis I
NIES39_D02980	PWY-6124	inosine-5'-phosphate biosynthesis II
NIES39_D02980	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_D02980	PWY-7234	inosine-5'-phosphate biosynthesis III
NIES39_D02990	PWY-6454	vancomycin resistance I
NIES39_D02990	PWY-6455	vancomycin resistance II
NIES39_D03420	PWY-1042	glycolysis IV (plant cytosol)
NIES39_D03420	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_D03420	PWY-6901	superpathway of glucose and xylose degradation
NIES39_D03420	PWY-7003	glycerol degradation to butanol
NIES39_D03430	PWY-1042	glycolysis IV (plant cytosol)
NIES39_D03430	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NIES39_D03430	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_D03430	PWY-7385	1,3-propanediol biosynthesis (engineered)
NIES39_D03450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NIES39_D03450	PWY-5723	Rubisco shunt
NIES39_D03590	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
NIES39_D03590	PWY-5739	GDP-D-perosamine biosynthesis
NIES39_D03590	PWY-5740	GDP-L-colitose biosynthesis
NIES39_D03590	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
NIES39_D03780	PWY-101	photosynthesis light reactions
NIES39_D03780	PWY-6785	hydrogen production VIII
NIES39_D03930	PWY-6167	flavin biosynthesis II (archaea)
NIES39_D03930	PWY-6168	flavin biosynthesis III (fungi)
NIES39_D04040	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NIES39_D04040	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
NIES39_D04100	PWY-6123	inosine-5'-phosphate biosynthesis I
NIES39_D04100	PWY-7234	inosine-5'-phosphate biosynthesis III
NIES39_D04130	PWY-6906	chitin derivatives degradation
NIES39_D04130	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
NIES39_D04130	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
NIES39_D04230	PWY-5913	TCA cycle VI (obligate autotrophs)
NIES39_D04230	PWY-6549	L-glutamine biosynthesis III
NIES39_D04230	PWY-6728	methylaspartate cycle
NIES39_D04230	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NIES39_D04230	PWY-7124	ethylene biosynthesis V (engineered)
NIES39_D04230	PWY-7254	TCA cycle VII (acetate-producers)
NIES39_D04230	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
NIES39_D04240	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
NIES39_D04240	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
NIES39_D04260	PWY-6823	molybdenum cofactor biosynthesis
NIES39_D04270	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
NIES39_D04270	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
NIES39_D04270	PWY-6268	adenosylcobalamin salvage from cobalamin
NIES39_D04270	PWY-6269	adenosylcobalamin salvage from cobinamide II
NIES39_D04350	PWY-3821	galactose degradation III
NIES39_D04350	PWY-6317	galactose degradation I (Leloir pathway)
NIES39_D04350	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
NIES39_D04350	PWY-6527	stachyose degradation
NIES39_D04350	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
NIES39_D04350	PWY-7344	UDP-D-galactose biosynthesis
NIES39_D04400	PWY-5958	acridone alkaloid biosynthesis
NIES39_D04400	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
NIES39_D04400	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
NIES39_D04410	PWY-7039	phosphatidate metabolism, as a signaling molecule
NIES39_D05270	PWY-7052	cyanophycin metabolism
NIES39_D05280	PWY-7052	cyanophycin metabolism
NIES39_D05310	PWY-6829	tRNA methylation (yeast)
NIES39_D05310	PWY-7285	methylwyosine biosynthesis
NIES39_D05310	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
NIES39_D05340	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
NIES39_D05570	PWY-5392	reductive TCA cycle II
NIES39_D05570	PWY-5537	pyruvate fermentation to acetate V
NIES39_D05570	PWY-5538	pyruvate fermentation to acetate VI
NIES39_D05570	PWY-5690	TCA cycle II (plants and fungi)
NIES39_D05570	PWY-5913	TCA cycle VI (obligate autotrophs)
NIES39_D05570	PWY-6728	methylaspartate cycle
NIES39_D05570	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NIES39_D05570	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
NIES39_D05580	PWY-5392	reductive TCA cycle II
NIES39_D05580	PWY-5537	pyruvate fermentation to acetate V
NIES39_D05580	PWY-5538	pyruvate fermentation to acetate VI
NIES39_D05580	PWY-5690	TCA cycle II (plants and fungi)
NIES39_D05580	PWY-5913	TCA cycle VI (obligate autotrophs)
NIES39_D05580	PWY-6728	methylaspartate cycle
NIES39_D05580	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NIES39_D05580	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
NIES39_D05610	PWY-1281	sulfoacetaldehyde degradation I
NIES39_D05610	PWY-5482	pyruvate fermentation to acetate II
NIES39_D05610	PWY-5485	pyruvate fermentation to acetate IV
NIES39_D05610	PWY-5497	purine nucleobases degradation II (anaerobic)
NIES39_D05610	PWY-6637	sulfolactate degradation II
NIES39_D05970	PWY-101	photosynthesis light reactions
NIES39_D05970	PWY-6785	hydrogen production VIII
NIES39_D05980	PWY-101	photosynthesis light reactions
NIES39_D05980	PWY-6785	hydrogen production VIII
NIES39_D05990	PWY-6167	flavin biosynthesis II (archaea)
NIES39_D05990	PWY-6168	flavin biosynthesis III (fungi)
NIES39_D05990	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_D06140	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NIES39_D06140	PWY-5723	Rubisco shunt
NIES39_D06150	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NIES39_D06150	PWY-5723	Rubisco shunt
NIES39_D06150	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_D06150	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_D06150	PWY-6901	superpathway of glucose and xylose degradation
NIES39_D06150	PWY-7560	methylerythritol phosphate pathway II
NIES39_D06170	PWY-6123	inosine-5'-phosphate biosynthesis I
NIES39_D06170	PWY-6124	inosine-5'-phosphate biosynthesis II
NIES39_D06170	PWY-7234	inosine-5'-phosphate biosynthesis III
NIES39_D06180	PWY-6788	cellulose degradation II (fungi)
NIES39_D06230	PWY-5101	L-isoleucine biosynthesis II
NIES39_D06230	PWY-5103	L-isoleucine biosynthesis III
NIES39_D06230	PWY-5104	L-isoleucine biosynthesis IV
NIES39_D06230	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
NIES39_D06230	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
NIES39_D06230	PWY-6389	(<i>S</i>)-acetoin biosynthesis
NIES39_D06230	PWY-7111	pyruvate fermentation to isobutanol (engineered)
NIES39_D06240	PWY-5101	L-isoleucine biosynthesis II
NIES39_D06240	PWY-6871	3-methylbutanol biosynthesis
NIES39_D06580	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_D06800	PWY-622	starch biosynthesis
NIES39_D07280	PWY-6832	2-aminoethylphosphonate degradation II
NIES39_D07310	PWY-7560	methylerythritol phosphate pathway II
NIES39_D07330	PWY-1042	glycolysis IV (plant cytosol)
NIES39_D07330	PWY-1622	formaldehyde assimilation I (serine pathway)
NIES39_D07330	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
NIES39_D07330	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_D07330	PWY-5723	Rubisco shunt
NIES39_D07330	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NIES39_D07330	PWY-6886	1-butanol autotrophic biosynthesis
NIES39_D07330	PWY-6901	superpathway of glucose and xylose degradation
NIES39_D07330	PWY-7003	glycerol degradation to butanol
NIES39_D07330	PWY-7124	ethylene biosynthesis V (engineered)
NIES39_D07330	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
NIES39_E00230	PWY-5057	L-valine degradation II
NIES39_E00230	PWY-5076	L-leucine degradation III
NIES39_E00230	PWY-5078	L-isoleucine degradation II
NIES39_E00230	PWY-5101	L-isoleucine biosynthesis II
NIES39_E00230	PWY-5103	L-isoleucine biosynthesis III
NIES39_E00230	PWY-5104	L-isoleucine biosynthesis IV
NIES39_E00230	PWY-5108	L-isoleucine biosynthesis V
NIES39_E00250	PWY-2941	L-lysine biosynthesis II
NIES39_E00250	PWY-5097	L-lysine biosynthesis VI
NIES39_E00440	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
NIES39_E00440	PWY-6148	tetrahydromethanopterin biosynthesis
NIES39_E00440	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
NIES39_E00440	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
NIES39_E00460	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_E00460	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_E00460	PWY-7560	methylerythritol phosphate pathway II
NIES39_E00610	PWY-6936	seleno-amino acid biosynthesis
NIES39_E00610	PWY-7274	D-cycloserine biosynthesis
NIES39_E00620	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
NIES39_E00620	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
NIES39_E01380	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
NIES39_E01670	PWY-2301	<i>myo</i>-inositol biosynthesis
NIES39_E01670	PWY-4702	phytate degradation I
NIES39_E01670	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
NIES39_E01700	PWY-5097	L-lysine biosynthesis VI
NIES39_E02020	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_E02030	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NIES39_E02120	PWY-5532	adenosine nucleotides degradation IV
NIES39_E02120	PWY-5723	Rubisco shunt
NIES39_E02140	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
NIES39_E02210	PWY-2941	L-lysine biosynthesis II
NIES39_E02210	PWY-2942	L-lysine biosynthesis III
NIES39_E02210	PWY-5097	L-lysine biosynthesis VI
NIES39_E02360	PWY-5316	nicotine biosynthesis
NIES39_E02360	PWY-5381	pyridine nucleotide cycling (plants)
NIES39_E02360	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
NIES39_E02360	PWY-7342	superpathway of nicotine biosynthesis
NIES39_E02570	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NIES39_E02570	PWY-5723	Rubisco shunt
NIES39_E02670	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
NIES39_E02910	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
NIES39_E03110	PWY-1001	cellulose biosynthesis
NIES39_E03920	PWY-5386	methylglyoxal degradation I
NIES39_E04050	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NIES39_E04050	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NIES39_E04160	PWY-5958	acridone alkaloid biosynthesis
NIES39_E04160	PWY-6543	4-aminobenzoate biosynthesis
NIES39_E04160	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
NIES39_E04160	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
NIES39_E04160	PWY-6722	candicidin biosynthesis
NIES39_E04190	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
NIES39_E04190	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
NIES39_E04190	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
NIES39_F00010	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NIES39_F00570	PWY-7560	methylerythritol phosphate pathway II
NIES39_F00630	PWY-5386	methylglyoxal degradation I
NIES39_G00240	PWY-5958	acridone alkaloid biosynthesis
NIES39_G00240	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
NIES39_G00240	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
NIES39_G00570	PWY-5704	urea degradation II
NIES39_G00580	PWY-5704	urea degradation II
NIES39_G00590	PWY-5704	urea degradation II
NIES39_G00670	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_G00670	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_G00840	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_G00850	PWY-5194	siroheme biosynthesis
NIES39_G00850	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_G00870	PWY-6683	sulfate reduction III (assimilatory)
NIES39_G00880	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_G00900	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NIES39_G00980	PWY-5686	UMP biosynthesis
NIES39_G01090	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
NIES39_G01090	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
NIES39_G01090	PWY-7242	D-fructuronate degradation
NIES39_G01090	PWY-7310	D-glucosaminate degradation
NIES39_G01100	PWY-4061	glutathione-mediated detoxification I
NIES39_G01100	PWY-6842	glutathione-mediated detoxification II
NIES39_G01100	PWY-7112	4-hydroxy-2-nonenal detoxification
NIES39_G01100	PWY-7533	gliotoxin biosynthesis
NIES39_G01160	PWY-7560	methylerythritol phosphate pathway II
NIES39_H00140	PWY-2941	L-lysine biosynthesis II
NIES39_H00140	PWY-2942	L-lysine biosynthesis III
NIES39_H00140	PWY-5097	L-lysine biosynthesis VI
NIES39_H00140	PWY-6559	spermidine biosynthesis II
NIES39_H00140	PWY-6562	norspermidine biosynthesis
NIES39_H00140	PWY-7153	grixazone biosynthesis
NIES39_H00180	PWY-5194	siroheme biosynthesis
NIES39_H00180	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_H00190	PWY-6683	sulfate reduction III (assimilatory)
NIES39_H00600	PWY-5656	mannosylglycerate biosynthesis I
NIES39_H00650	PWY-101	photosynthesis light reactions
NIES39_H00650	PWY-6785	hydrogen production VIII
NIES39_H00710	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_H00850	PWY-3781	aerobic respiration I (cytochrome c)
NIES39_H00850	PWY-4302	aerobic respiration III (alternative oxidase pathway)
NIES39_H00850	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
NIES39_H00850	PWY-5690	TCA cycle II (plants and fungi)
NIES39_H00850	PWY-6728	methylaspartate cycle
NIES39_H00850	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NIES39_H00850	PWY-7254	TCA cycle VII (acetate-producers)
NIES39_H00850	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
NIES39_H00890	PWY-6610	adenine and adenosine salvage IV
NIES39_J00020	PWY-6349	CDP-archaeol biosynthesis
NIES39_J00200	PWY-4981	L-proline biosynthesis II (from arginine)
NIES39_J00200	PWY-4984	urea cycle
NIES39_J00200	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NIES39_J00350	PWY-4261	glycerol degradation I
NIES39_J00500	PWY-381	nitrate reduction II (assimilatory)
NIES39_J00500	PWY-5675	nitrate reduction V (assimilatory)
NIES39_J00500	PWY-6549	L-glutamine biosynthesis III
NIES39_J00500	PWY-6963	ammonia assimilation cycle I
NIES39_J00500	PWY-6964	ammonia assimilation cycle II
NIES39_J00530	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
NIES39_J00530	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
NIES39_J00560	PWY-6167	flavin biosynthesis II (archaea)
NIES39_J00560	PWY-6168	flavin biosynthesis III (fungi)
NIES39_J00560	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
NIES39_J00670	PWY-5686	UMP biosynthesis
NIES39_J00830	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
NIES39_J00830	PWY-2201	folate transformations I
NIES39_J00830	PWY-3841	folate transformations II
NIES39_J00830	PWY-5030	L-histidine degradation III
NIES39_J00830	PWY-5497	purine nucleobases degradation II (anaerobic)
NIES39_J00830	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
NIES39_J00870	PWY-1042	glycolysis IV (plant cytosol)
NIES39_J00870	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_J00870	PWY-6886	1-butanol autotrophic biosynthesis
NIES39_J00870	PWY-6901	superpathway of glucose and xylose degradation
NIES39_J00870	PWY-7003	glycerol degradation to butanol
NIES39_J00910	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
NIES39_J00910	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
NIES39_J01260	PWY-4202	arsenate detoxification I (glutaredoxin)
NIES39_J01270	PWY-6749	CMP-legionaminate biosynthesis I
NIES39_J01490	PWY-5941	glycogen degradation II (eukaryotic)
NIES39_J01490	PWY-622	starch biosynthesis
NIES39_J01490	PWY-6731	starch degradation III
NIES39_J01490	PWY-6737	starch degradation V
NIES39_J01490	PWY-7238	sucrose biosynthesis II
NIES39_J01670	PWY-2201	folate transformations I
NIES39_J01670	PWY-5497	purine nucleobases degradation II (anaerobic)
NIES39_J02310	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
NIES39_J02310	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
NIES39_J02310	PWY-6164	3-dehydroquinate biosynthesis I
NIES39_J03140	PWY-6164	3-dehydroquinate biosynthesis I
NIES39_J03300	PWY-5686	UMP biosynthesis
NIES39_J03810	PWY-6654	phosphopantothenate biosynthesis III
NIES39_J03840	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
NIES39_J03970	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
NIES39_J04000	PWY-6167	flavin biosynthesis II (archaea)
NIES39_J04110	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_J04110	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_J04390	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_J05350	PWY-5097	L-lysine biosynthesis VI
NIES39_J05430	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
NIES39_J05510	PWY-5659	GDP-mannose biosynthesis
NIES39_J05510	PWY-6073	alginate biosynthesis I (algal)
NIES39_J05510	PWY-6082	alginate biosynthesis II (bacterial)
NIES39_J05510	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
NIES39_J05830	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
NIES39_J05830	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
NIES39_J05830	PWY-5194	siroheme biosynthesis
NIES39_J05830	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_J05880	PWY-4381	fatty acid biosynthesis initiation I
NIES39_J05880	PWY-5743	3-hydroxypropanoate cycle
NIES39_J05880	PWY-5744	glyoxylate assimilation
NIES39_J05880	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
NIES39_J05880	PWY-6679	jadomycin biosynthesis
NIES39_J05880	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
NIES39_J05970	PWY-6672	<i>cis</i>-genanyl-CoA degradation
NIES39_J05970	PWY-7118	chitin degradation to ethanol
NIES39_K00540	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
NIES39_K00710	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
NIES39_K00710	PWY-6855	chitin degradation I (archaea)
NIES39_K00710	PWY-6906	chitin derivatives degradation
NIES39_K01490	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
NIES39_K01490	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
NIES39_K01490	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
NIES39_K02120	PWY-6749	CMP-legionaminate biosynthesis I
NIES39_K02140	PWY-5101	L-isoleucine biosynthesis II
NIES39_K02140	PWY-5103	L-isoleucine biosynthesis III
NIES39_K02140	PWY-5104	L-isoleucine biosynthesis IV
NIES39_K02140	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
NIES39_K02140	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
NIES39_K02140	PWY-6389	(<i>S</i>)-acetoin biosynthesis
NIES39_K02140	PWY-7111	pyruvate fermentation to isobutanol (engineered)
NIES39_K02160	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
NIES39_K02640	PWY-6167	flavin biosynthesis II (archaea)
NIES39_K02760	PWY-6012	acyl carrier protein metabolism I
NIES39_K02760	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
NIES39_K02830	PWY-5532	adenosine nucleotides degradation IV
NIES39_K02830	PWY-5723	Rubisco shunt
NIES39_K02850	PWY-5532	adenosine nucleotides degradation IV
NIES39_K02850	PWY-5723	Rubisco shunt
NIES39_K02910	PWY-5101	L-isoleucine biosynthesis II
NIES39_K02910	PWY-5103	L-isoleucine biosynthesis III
NIES39_K02910	PWY-5104	L-isoleucine biosynthesis IV
NIES39_K02910	PWY-7111	pyruvate fermentation to isobutanol (engineered)
NIES39_K03030	PWY-101	photosynthesis light reactions
NIES39_K03030	PWY-6785	hydrogen production VIII
NIES39_K03080	PWY-101	photosynthesis light reactions
NIES39_K03080	PWY-6785	hydrogen production VIII
NIES39_K03090	PWY-5198	factor 420 biosynthesis
NIES39_K03190	PWY-5839	menaquinol-7 biosynthesis
NIES39_K03190	PWY-5844	menaquinol-9 biosynthesis
NIES39_K03190	PWY-5849	menaquinol-6 biosynthesis
NIES39_K03190	PWY-5890	menaquinol-10 biosynthesis
NIES39_K03190	PWY-5891	menaquinol-11 biosynthesis
NIES39_K03190	PWY-5892	menaquinol-12 biosynthesis
NIES39_K03190	PWY-5895	menaquinol-13 biosynthesis
NIES39_K03250	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
NIES39_K03270	PWY-3341	L-proline biosynthesis III
NIES39_K03270	PWY-4981	L-proline biosynthesis II (from arginine)
NIES39_K03270	PWY-6344	L-ornithine degradation II (Stickland reaction)
NIES39_K03410	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_K03410	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_K03410	PWY-7560	methylerythritol phosphate pathway II
NIES39_K03590	PWY-5443	aminopropanol phosphate biosynthesis I
NIES39_K03650	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
NIES39_K03650	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
NIES39_K03650	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
NIES39_K03650	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
NIES39_K03890	PWY-4041	&gamma;-glutamyl cycle
NIES39_K04000	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
NIES39_K04020	PWY-4981	L-proline biosynthesis II (from arginine)
NIES39_K04090	PWY-40	putrescine biosynthesis I
NIES39_K04090	PWY-43	putrescine biosynthesis II
NIES39_K04090	PWY-6305	putrescine biosynthesis IV
NIES39_K04090	PWY-6834	spermidine biosynthesis III
NIES39_K04110	PWY-5941	glycogen degradation II (eukaryotic)
NIES39_K04110	PWY-6724	starch degradation II
NIES39_K04110	PWY-6737	starch degradation V
NIES39_K04110	PWY-7238	sucrose biosynthesis II
NIES39_K04130	PWY-5941	glycogen degradation II (eukaryotic)
NIES39_K04130	PWY-6724	starch degradation II
NIES39_K04130	PWY-6737	starch degradation V
NIES39_K04130	PWY-7238	sucrose biosynthesis II
NIES39_K04150	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_K04190	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
NIES39_K04190	PWY-5389	3-methylthiopropanoate biosynthesis
NIES39_K04530	PWY-6823	molybdenum cofactor biosynthesis
NIES39_K04530	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_K04530	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_K04530	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
NIES39_K04550	PWY-6703	preQ<sub>0</sub> biosynthesis
NIES39_K04660	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
NIES39_K04760	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_K04760	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_K04800	PWY-5532	adenosine nucleotides degradation IV
NIES39_K04800	PWY-5723	Rubisco shunt
NIES39_K04910	PWY-6834	spermidine biosynthesis III
NIES39_K04980	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
NIES39_K04980	PWY-6167	flavin biosynthesis II (archaea)
NIES39_K04980	PWY-6168	flavin biosynthesis III (fungi)
NIES39_K05040	PWY-7183	pyrimidine nucleobases salvage I
NIES39_K05050	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
NIES39_K05050	PWY-6174	mevalonate pathway II (archaea)
NIES39_K05050	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
NIES39_K05050	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
NIES39_K05050	PWY-7102	bisabolene biosynthesis
NIES39_K05050	PWY-7391	isoprene biosynthesis II (engineered)
NIES39_K05050	PWY-7524	mevalonate pathway III (archaea)
NIES39_K05050	PWY-7560	methylerythritol phosphate pathway II
NIES39_K05050	PWY-922	mevalonate pathway I
NIES39_L00020	PWY-2781	<i>cis</i>-zeatin biosynthesis
NIES39_L00080	PWY-2941	L-lysine biosynthesis II
NIES39_L00080	PWY-2942	L-lysine biosynthesis III
NIES39_L00080	PWY-5097	L-lysine biosynthesis VI
NIES39_L00080	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NIES39_L00080	PWY-6559	spermidine biosynthesis II
NIES39_L00080	PWY-6562	norspermidine biosynthesis
NIES39_L00080	PWY-7153	grixazone biosynthesis
NIES39_L00080	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NIES39_L00090	PWY-2941	L-lysine biosynthesis II
NIES39_L00090	PWY-2942	L-lysine biosynthesis III
NIES39_L00090	PWY-5097	L-lysine biosynthesis VI
NIES39_L00130	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
NIES39_L00130	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
NIES39_L00830	PWY-3162	L-tryptophan degradation V (side chain pathway)
NIES39_L00830	PWY-5057	L-valine degradation II
NIES39_L00830	PWY-5076	L-leucine degradation III
NIES39_L00830	PWY-5078	L-isoleucine degradation II
NIES39_L00830	PWY-5079	L-phenylalanine degradation III
NIES39_L00830	PWY-5082	L-methionine degradation III
NIES39_L00830	PWY-5162	2-oxopentenoate degradation
NIES39_L00830	PWY-5436	L-threonine degradation IV
NIES39_L00830	PWY-5480	pyruvate fermentation to ethanol I
NIES39_L00830	PWY-5486	pyruvate fermentation to ethanol II
NIES39_L00830	PWY-5751	phenylethanol biosynthesis
NIES39_L00830	PWY-6028	acetoin degradation
NIES39_L00830	PWY-6313	serotonin degradation
NIES39_L00830	PWY-6333	acetaldehyde biosynthesis I
NIES39_L00830	PWY-6342	noradrenaline and adrenaline degradation
NIES39_L00830	PWY-6587	pyruvate fermentation to ethanol III
NIES39_L00830	PWY-6802	salidroside biosynthesis
NIES39_L00830	PWY-6871	3-methylbutanol biosynthesis
NIES39_L00830	PWY-7013	L-1,2-propanediol degradation
NIES39_L00830	PWY-7085	triethylamine degradation
NIES39_L00830	PWY-7111	pyruvate fermentation to isobutanol (engineered)
NIES39_L00830	PWY-7118	chitin degradation to ethanol
NIES39_L00830	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
NIES39_L00830	PWY-7396	butanol and isobutanol biosynthesis (engineered)
NIES39_L00830	PWY-7557	dehydrodiconiferyl alcohol degradation
NIES39_L00870	PWY-4081	glutathione redox reactions I
NIES39_L00980	PWY-2201	folate transformations I
NIES39_L00980	PWY-3841	folate transformations II
NIES39_L01070	PWY-5199	factor 420 polyglutamylation
NIES39_L01300	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_L01300	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_L01350	PWY-5386	methylglyoxal degradation I
NIES39_L01410	PWY-4202	arsenate detoxification I (glutaredoxin)
NIES39_L01410	PWY-4621	arsenate detoxification II (glutaredoxin)
NIES39_L01750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NIES39_L01750	PWY-5686	UMP biosynthesis
NIES39_L01750	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NIES39_L01870	PWY-101	photosynthesis light reactions
NIES39_L01870	PWY-6785	hydrogen production VIII
NIES39_L02470	PWY-1042	glycolysis IV (plant cytosol)
NIES39_L02470	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NIES39_L02470	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_L02470	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NIES39_L02470	PWY-7385	1,3-propanediol biosynthesis (engineered)
NIES39_L02790	PWY-101	photosynthesis light reactions
NIES39_L02790	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
NIES39_L02960	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
NIES39_L02960	PWY-6148	tetrahydromethanopterin biosynthesis
NIES39_L02960	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
NIES39_L02960	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
NIES39_L02990	PWY-5198	factor 420 biosynthesis
NIES39_L03070	PWY-2723	trehalose degradation V
NIES39_L03070	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
NIES39_L03070	PWY-5661	GDP-glucose biosynthesis
NIES39_L03070	PWY-7238	sucrose biosynthesis II
NIES39_L03070	PWY-7385	1,3-propanediol biosynthesis (engineered)
NIES39_L03090	PWY-5482	pyruvate fermentation to acetate II
NIES39_L03090	PWY-5485	pyruvate fermentation to acetate IV
NIES39_L03090	PWY-5497	purine nucleobases degradation II (anaerobic)
NIES39_L03460	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
NIES39_L04040	PWY-5382	hydrogen oxidation II (aerobic, NAD)
NIES39_L04040	PWY-6758	hydrogen production II
NIES39_L04560	PWY-5971	palmitate biosynthesis II (bacteria and plants)
NIES39_L04560	PWY-5973	<i>cis</i>-vaccenate biosynthesis
NIES39_L04560	PWY-5989	stearate biosynthesis II (bacteria and plants)
NIES39_L04560	PWY-5994	palmitate biosynthesis I (animals and fungi)
NIES39_L04560	PWY-6113	superpathway of mycolate biosynthesis
NIES39_L04560	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
NIES39_L04560	PWY-6519	8-amino-7-oxononanoate biosynthesis I
NIES39_L04560	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
NIES39_L04560	PWYG-321	mycolate biosynthesis
NIES39_L04920	PWY-7560	methylerythritol phosphate pathway II
NIES39_L04930	PWY-622	starch biosynthesis
NIES39_L05610	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_L05610	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_L05630	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_L05630	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_L05710	PWY-2201	folate transformations I
NIES39_L05710	PWY-3841	folate transformations II
NIES39_L05960	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NIES39_L05960	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_L05960	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NIES39_L05960	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NIES39_L05960	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_L05960	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_L05960	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_L05960	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
NIES39_L05980	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NIES39_L05980	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_L05980	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NIES39_L05980	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NIES39_L05980	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_L05980	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_L05980	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_L05980	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
NIES39_L05990	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NIES39_L05990	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_L05990	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NIES39_L05990	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NIES39_L05990	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_L05990	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_L05990	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_L05990	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
NIES39_L06150	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
NIES39_L06160	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_L06220	PWY-2622	trehalose biosynthesis IV
NIES39_L06230	PWY-5686	UMP biosynthesis
NIES39_L06330	PWY-1622	formaldehyde assimilation I (serine pathway)
NIES39_L06330	PWY-181	photorespiration
NIES39_L06330	PWY-2161	folate polyglutamylation
NIES39_L06330	PWY-2201	folate transformations I
NIES39_L06330	PWY-3661	glycine betaine degradation I
NIES39_L06330	PWY-3661-1	glycine betaine degradation II (mammalian)
NIES39_L06330	PWY-3841	folate transformations II
NIES39_L06330	PWY-5497	purine nucleobases degradation II (anaerobic)
NIES39_L06340	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
NIES39_L06340	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
NIES39_L06340	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
NIES39_L06370	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
NIES39_L06370	PWY-6416	quinate degradation II
NIES39_L06370	PWY-6707	gallate biosynthesis
NIES39_L06780	PWY-6840	homoglutathione biosynthesis
NIES39_L06780	PWY-7255	ergothioneine biosynthesis I (bacteria)
NIES39_M00510	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
NIES39_M00510	PWY-7177	UTP and CTP dephosphorylation II
NIES39_M00510	PWY-7185	UTP and CTP dephosphorylation I
NIES39_M01090	PWY-1622	formaldehyde assimilation I (serine pathway)
NIES39_M01090	PWY-5392	reductive TCA cycle II
NIES39_M01090	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
NIES39_M01090	PWY-5690	TCA cycle II (plants and fungi)
NIES39_M01090	PWY-5913	TCA cycle VI (obligate autotrophs)
NIES39_M01090	PWY-6728	methylaspartate cycle
NIES39_M01090	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NIES39_M01090	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
NIES39_M01090	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
NIES39_M01450	PWY-6936	seleno-amino acid biosynthesis
NIES39_M01480	PWY-6823	molybdenum cofactor biosynthesis
NIES39_M01480	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_M01480	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_M01480	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
NIES39_M01500	PWY-5392	reductive TCA cycle II
NIES39_M01500	PWY-5537	pyruvate fermentation to acetate V
NIES39_M01500	PWY-5538	pyruvate fermentation to acetate VI
NIES39_M01500	PWY-5690	TCA cycle II (plants and fungi)
NIES39_M01500	PWY-5913	TCA cycle VI (obligate autotrophs)
NIES39_M01500	PWY-6728	methylaspartate cycle
NIES39_M01500	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NIES39_M01500	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
NIES39_M01570	PWY-5941	glycogen degradation II (eukaryotic)
NIES39_M01570	PWY-622	starch biosynthesis
NIES39_M01570	PWY-6731	starch degradation III
NIES39_M01570	PWY-6737	starch degradation V
NIES39_M01570	PWY-7238	sucrose biosynthesis II
NIES39_M01830	PWY-5941	glycogen degradation II (eukaryotic)
NIES39_M01830	PWY-6724	starch degradation II
NIES39_M01830	PWY-6737	starch degradation V
NIES39_M01830	PWY-7238	sucrose biosynthesis II
NIES39_M01900	PWY-4983	L-citrulline-nitric oxide cycle
NIES39_M01900	PWY-4984	urea cycle
NIES39_M01900	PWY-5	canavanine biosynthesis
NIES39_M01900	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NIES39_M01900	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NIES39_M01920	PWY-6622	heptadecane biosynthesis
NIES39_M01920	PWY-7032	alkane biosynthesis I
NIES39_M01940	PWY-282	cuticular wax biosynthesis
NIES39_M01940	PWY-6622	heptadecane biosynthesis
NIES39_M01940	PWY-7032	alkane biosynthesis I
NIES39_M01990	PWY-3162	L-tryptophan degradation V (side chain pathway)
NIES39_M01990	PWY-5057	L-valine degradation II
NIES39_M01990	PWY-5076	L-leucine degradation III
NIES39_M01990	PWY-5078	L-isoleucine degradation II
NIES39_M01990	PWY-5079	L-phenylalanine degradation III
NIES39_M01990	PWY-5082	L-methionine degradation III
NIES39_M01990	PWY-5162	2-oxopentenoate degradation
NIES39_M01990	PWY-5436	L-threonine degradation IV
NIES39_M01990	PWY-5480	pyruvate fermentation to ethanol I
NIES39_M01990	PWY-5486	pyruvate fermentation to ethanol II
NIES39_M01990	PWY-5751	phenylethanol biosynthesis
NIES39_M01990	PWY-6028	acetoin degradation
NIES39_M01990	PWY-6313	serotonin degradation
NIES39_M01990	PWY-6333	acetaldehyde biosynthesis I
NIES39_M01990	PWY-6342	noradrenaline and adrenaline degradation
NIES39_M01990	PWY-6587	pyruvate fermentation to ethanol III
NIES39_M01990	PWY-6802	salidroside biosynthesis
NIES39_M01990	PWY-6871	3-methylbutanol biosynthesis
NIES39_M01990	PWY-7013	L-1,2-propanediol degradation
NIES39_M01990	PWY-7085	triethylamine degradation
NIES39_M01990	PWY-7111	pyruvate fermentation to isobutanol (engineered)
NIES39_M01990	PWY-7118	chitin degradation to ethanol
NIES39_M01990	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
NIES39_M01990	PWY-7396	butanol and isobutanol biosynthesis (engineered)
NIES39_M01990	PWY-7557	dehydrodiconiferyl alcohol degradation
NIES39_M02130	PWY-4261	glycerol degradation I
NIES39_M02130	PWY-6118	glycerol-3-phosphate shuttle
NIES39_M02130	PWY-6952	glycerophosphodiester degradation
NIES39_M02140	PWY-5667	CDP-diacylglycerol biosynthesis I
NIES39_M02140	PWY-5981	CDP-diacylglycerol biosynthesis III
NIES39_M02310	PWY-1042	glycolysis IV (plant cytosol)
NIES39_M02310	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
NIES39_M02310	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_M02310	PWY-5723	Rubisco shunt
NIES39_M02310	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NIES39_M02310	PWY-6886	1-butanol autotrophic biosynthesis
NIES39_M02310	PWY-6901	superpathway of glucose and xylose degradation
NIES39_M02310	PWY-7003	glycerol degradation to butanol
NIES39_M02310	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
NIES39_M02310	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
NIES39_M02380	PWY-5381	pyridine nucleotide cycling (plants)
NIES39_M02380	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
NIES39_M02460	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
NIES39_M02460	PWY-3162	L-tryptophan degradation V (side chain pathway)
NIES39_M02460	PWY-5057	L-valine degradation II
NIES39_M02460	PWY-5076	L-leucine degradation III
NIES39_M02460	PWY-5078	L-isoleucine degradation II
NIES39_M02460	PWY-5079	L-phenylalanine degradation III
NIES39_M02460	PWY-5082	L-methionine degradation III
NIES39_M02460	PWY-5480	pyruvate fermentation to ethanol I
NIES39_M02460	PWY-5486	pyruvate fermentation to ethanol II
NIES39_M02460	PWY-5751	phenylethanol biosynthesis
NIES39_M02460	PWY-6028	acetoin degradation
NIES39_M02460	PWY-6313	serotonin degradation
NIES39_M02460	PWY-6333	acetaldehyde biosynthesis I
NIES39_M02460	PWY-6342	noradrenaline and adrenaline degradation
NIES39_M02460	PWY-6587	pyruvate fermentation to ethanol III
NIES39_M02460	PWY-6802	salidroside biosynthesis
NIES39_M02460	PWY-6871	3-methylbutanol biosynthesis
NIES39_M02460	PWY-7013	L-1,2-propanediol degradation
NIES39_M02460	PWY-7111	pyruvate fermentation to isobutanol (engineered)
NIES39_M02460	PWY-7118	chitin degradation to ethanol
NIES39_M02460	PWY-7396	butanol and isobutanol biosynthesis (engineered)
NIES39_M02460	PWY-7557	dehydrodiconiferyl alcohol degradation
NIES39_M02520	PWY-6749	CMP-legionaminate biosynthesis I
NIES39_M02530	PWY-5663	tetrahydrobiopterin biosynthesis I
NIES39_M02530	PWY-5664	tetrahydrobiopterin biosynthesis II
NIES39_M02530	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
NIES39_M02530	PWY-6703	preQ<sub>0</sub> biosynthesis
NIES39_M02530	PWY-6983	tetrahydrobiopterin biosynthesis III
NIES39_M02530	PWY-7442	drosopterin and aurodrosopterin biosynthesis
NIES39_M02550	PWY-4381	fatty acid biosynthesis initiation I
NIES39_M02550	PWY-5743	3-hydroxypropanoate cycle
NIES39_M02550	PWY-5744	glyoxylate assimilation
NIES39_M02550	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
NIES39_M02550	PWY-6679	jadomycin biosynthesis
NIES39_M02550	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
NIES39_M02720	PWY-1042	glycolysis IV (plant cytosol)
NIES39_M02720	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NIES39_M02720	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_M02720	PWY-7385	1,3-propanediol biosynthesis (engineered)
NIES39_M02750	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NIES39_M02750	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NIES39_M02750	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NIES39_M02780	PWY-2723	trehalose degradation V
NIES39_M02780	PWY-3801	sucrose degradation II (sucrose synthase)
NIES39_M02780	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
NIES39_M02780	PWY-5661	GDP-glucose biosynthesis
NIES39_M02780	PWY-5661-1	NIES39_M02780|NIES39_M02780|YP_005071653.1|GeneID:15165172
NIES39_M02780	PWY-5940	streptomycin biosynthesis
NIES39_M02780	PWY-5941	glycogen degradation II (eukaryotic)
NIES39_M02780	PWY-622	starch biosynthesis
NIES39_M02780	PWY-6731	starch degradation III
NIES39_M02780	PWY-6737	starch degradation V
NIES39_M02780	PWY-6749	CMP-legionaminate biosynthesis I
NIES39_M02780	PWY-7238	sucrose biosynthesis II
NIES39_M02780	PWY-7343	UDP-glucose biosynthesis
NIES39_N00260	PWY-5367	petroselinate biosynthesis
NIES39_N00260	PWY-5971	palmitate biosynthesis II (bacteria and plants)
NIES39_N00260	PWY-5973	<i>cis</i>-vaccenate biosynthesis
NIES39_N00260	PWY-5989	stearate biosynthesis II (bacteria and plants)
NIES39_N00260	PWY-5994	palmitate biosynthesis I (animals and fungi)
NIES39_N00260	PWY-6113	superpathway of mycolate biosynthesis
NIES39_N00260	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
NIES39_N00260	PWY-6519	8-amino-7-oxononanoate biosynthesis I
NIES39_N00260	PWY-6951	NIES39_N00260|fabG|YP_005071681.1|GeneID:15167188
NIES39_N00260	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
NIES39_N00260	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
NIES39_N00260	PWYG-321	mycolate biosynthesis
NIES39_N00470	PWY-6703	preQ<sub>0</sub> biosynthesis
NIES39_N00560	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
NIES39_N00560	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
NIES39_N00690	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
NIES39_N00990	PWY-5381	pyridine nucleotide cycling (plants)
NIES39_N00990	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
NIES39_N00990	PWY-6596	adenosine nucleotides degradation I
NIES39_N00990	PWY-6606	guanosine nucleotides degradation II
NIES39_N00990	PWY-6607	guanosine nucleotides degradation I
NIES39_N00990	PWY-6608	guanosine nucleotides degradation III
NIES39_N00990	PWY-7185	UTP and CTP dephosphorylation I
NIES39_N01160	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
NIES39_N01160	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
NIES39_N01190	PWY-4381	fatty acid biosynthesis initiation I
NIES39_N01200	PWY-4381	fatty acid biosynthesis initiation I
NIES39_N01200	PWY-6799	fatty acid biosynthesis (plant mitochondria)
NIES39_N01200	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
NIES39_O01350	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
NIES39_O01350	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
NIES39_O01350	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
NIES39_O01350	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
NIES39_O01620	PWY-3781	aerobic respiration I (cytochrome c)
NIES39_O01620	PWY-4302	aerobic respiration III (alternative oxidase pathway)
NIES39_O01620	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
NIES39_O01620	PWY-6692	Fe(II) oxidation
NIES39_O01630	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
NIES39_O01860	PWY-3801	sucrose degradation II (sucrose synthase)
NIES39_O03090	PWY-3781	aerobic respiration I (cytochrome c)
NIES39_O03090	PWY-4521	arsenite oxidation I (respiratory)
NIES39_O03090	PWY-6692	Fe(II) oxidation
NIES39_O03090	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
NIES39_O04040	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NIES39_O04040	PWY-5686	UMP biosynthesis
NIES39_O04040	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NIES39_O04200	PWY-6614	tetrahydrofolate biosynthesis
NIES39_O04210	PWY-1042	glycolysis IV (plant cytosol)
NIES39_O04210	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_O04210	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NIES39_O04210	PWY-7003	glycerol degradation to butanol
NIES39_O04220	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_O04220	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_O04290	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
NIES39_O04290	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
NIES39_O04290	PWY-6897	thiamin salvage II
NIES39_O04290	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
NIES39_O04290	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
NIES39_O04290	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
NIES39_O04290	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
NIES39_O04360	PWY-3221	dTDP-L-rhamnose biosynthesis II
NIES39_O04360	PWY-6808	dTDP-D-forosamine biosynthesis
NIES39_O04360	PWY-6942	dTDP-D-desosamine biosynthesis
NIES39_O04360	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
NIES39_O04360	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
NIES39_O04360	PWY-6974	dTDP-L-olivose biosynthesis
NIES39_O04360	PWY-6976	dTDP-L-mycarose biosynthesis
NIES39_O04360	PWY-7104	dTDP-L-megosamine biosynthesis
NIES39_O04360	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
NIES39_O04360	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
NIES39_O04360	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
NIES39_O04360	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
NIES39_O04360	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
NIES39_O04360	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
NIES39_O04360	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
NIES39_O04360	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
NIES39_O04550	PWY-5381	pyridine nucleotide cycling (plants)
NIES39_O04570	PWY-3781	aerobic respiration I (cytochrome c)
NIES39_O04570	PWY-4302	aerobic respiration III (alternative oxidase pathway)
NIES39_O04570	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
NIES39_O04570	PWY-5690	TCA cycle II (plants and fungi)
NIES39_O04570	PWY-6728	methylaspartate cycle
NIES39_O04570	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
NIES39_O04570	PWY-7254	TCA cycle VII (acetate-producers)
NIES39_O04570	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
NIES39_O04610	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
NIES39_O04610	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
NIES39_O04610	PWY-6269	adenosylcobalamin salvage from cobinamide II
NIES39_O04700	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NIES39_O04700	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_O04700	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_O04700	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
NIES39_O04700	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
NIES39_O04700	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NIES39_O04720	PWY-101	photosynthesis light reactions
NIES39_O04720	PWY-6785	hydrogen production VIII
NIES39_O04730	PWY-4041	&gamma;-glutamyl cycle
NIES39_O04730	PWY-5826	hypoglycin biosynthesis
NIES39_O04810	PWY-6700	queuosine biosynthesis
NIES39_O04830	PWY-6834	spermidine biosynthesis III
NIES39_O05140	PWY-5723	Rubisco shunt
NIES39_O05190	PWY-6823	molybdenum cofactor biosynthesis
NIES39_O05230	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
NIES39_O05230	PWY-5940	streptomycin biosynthesis
NIES39_O05290	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
NIES39_O05290	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
NIES39_O05290	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
NIES39_O06130	PWY-2161	folate polyglutamylation
NIES39_O06160	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
NIES39_O06160	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
NIES39_O06350	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
NIES39_O06350	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
NIES39_O06360	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NIES39_O06360	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
NIES39_O06360	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
NIES39_O06380	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
NIES39_O06380	PWY-7205	CMP phosphorylation
NIES39_O06400	PWY-6823	molybdenum cofactor biosynthesis
NIES39_O06460	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_O06460	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_O06660	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_O06660	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_O06690	PWY-7560	methylerythritol phosphate pathway II
NIES39_O06800	PWY-3961	phosphopantothenate biosynthesis II
NIES39_O06990	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
NIES39_O06990	PWY-5723	Rubisco shunt
NIES39_P00240	PWY-1042	glycolysis IV (plant cytosol)
NIES39_P00240	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
NIES39_P00240	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_P00240	PWY-5723	Rubisco shunt
NIES39_P00240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NIES39_P00240	PWY-6886	1-butanol autotrophic biosynthesis
NIES39_P00240	PWY-6901	superpathway of glucose and xylose degradation
NIES39_P00240	PWY-7003	glycerol degradation to butanol
NIES39_P00240	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
NIES39_P00240	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
NIES39_Q00120	PWY-842	starch degradation I
NIES39_Q00490	PWY-702	L-methionine biosynthesis II
NIES39_Q00590	PWY-3801	sucrose degradation II (sucrose synthase)
NIES39_Q00590	PWY-5054	sorbitol biosynthesis I
NIES39_Q00590	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
NIES39_Q00590	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
NIES39_Q00590	PWY-5659	GDP-mannose biosynthesis
NIES39_Q00590	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NIES39_Q00590	PWY-621	sucrose degradation III (sucrose invertase)
NIES39_Q00590	PWY-622	starch biosynthesis
NIES39_Q00590	PWY-6531	mannitol cycle
NIES39_Q00590	PWY-6981	chitin biosynthesis
NIES39_Q00590	PWY-7238	sucrose biosynthesis II
NIES39_Q00590	PWY-7347	sucrose biosynthesis III
NIES39_Q00590	PWY-7385	1,3-propanediol biosynthesis (engineered)
NIES39_Q00600	PWY-1281	sulfoacetaldehyde degradation I
NIES39_Q00600	PWY-5482	pyruvate fermentation to acetate II
NIES39_Q00600	PWY-5485	pyruvate fermentation to acetate IV
NIES39_Q00600	PWY-5497	purine nucleobases degradation II (anaerobic)
NIES39_Q00600	PWY-6637	sulfolactate degradation II
NIES39_Q00650	PWY-5484	glycolysis II (from fructose 6-phosphate)
NIES39_Q00930	PWY-5874	heme degradation
NIES39_Q00930	PWY-5915	phycoerythrobilin biosynthesis I
NIES39_Q00930	PWY-5917	phycocyanobilin biosynthesis
NIES39_Q00930	PWY-7170	phytochromobilin biosynthesis
NIES39_Q00940	PWY-5381	pyridine nucleotide cycling (plants)
NIES39_Q00940	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
NIES39_Q00940	PWY-6596	adenosine nucleotides degradation I
NIES39_Q00940	PWY-6606	guanosine nucleotides degradation II
NIES39_Q00940	PWY-6607	guanosine nucleotides degradation I
NIES39_Q00940	PWY-6608	guanosine nucleotides degradation III
NIES39_Q00940	PWY-7185	UTP and CTP dephosphorylation I
NIES39_Q01250	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
NIES39_Q01310	PWY-5964	guanylyl molybdenum cofactor biosynthesis
NIES39_Q01490	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NIES39_Q01500	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
NIES39_Q01500	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
NIES39_Q01500	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
NIES39_Q01500	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
NIES39_Q01510	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
NIES39_Q02090	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_Q02090	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_Q02250	PWY-6749	CMP-legionaminate biosynthesis I
NIES39_Q02290	PWY-101	photosynthesis light reactions
NIES39_Q02290	PWY-6785	hydrogen production VIII
NIES39_Q02330	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
NIES39_Q02330	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
NIES39_Q02700	PWY-6317	galactose degradation I (Leloir pathway)
NIES39_Q02700	PWY-6527	stachyose degradation
NIES39_Q02830	PWY-1622	formaldehyde assimilation I (serine pathway)
NIES39_Q02830	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
NIES39_Q02830	PWY-5913	TCA cycle VI (obligate autotrophs)
NIES39_Q02830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
NIES39_Q02830	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
NIES39_Q02830	PWY-6549	L-glutamine biosynthesis III
NIES39_Q02830	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
NIES39_Q02830	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
NIES39_Q02830	PWY-7124	ethylene biosynthesis V (engineered)
NIES39_Q02910	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
NIES39_Q02910	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
NIES39_Q02910	PWY-6269	adenosylcobalamin salvage from cobinamide II
NIES39_Q02930	PWY-6700	queuosine biosynthesis
NIES39_Q02980	PWY-6936	seleno-amino acid biosynthesis
NIES39_Q03010	PWY-101	photosynthesis light reactions
NIES39_Q03010	PWY-6785	hydrogen production VIII
NIES39_R00140	PWY-101	photosynthesis light reactions
NIES39_R00140	PWY-6785	hydrogen production VIII
NIES39_R00490	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
NIES39_R00630	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
NIES39_R00630	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
NIES39_R00640	PWY-6891	thiazole biosynthesis II (Bacillus)
NIES39_R00640	PWY-6892	thiazole biosynthesis I (E. coli)
NIES39_R00680	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
NIES39_R00680	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
NIES39_R00770	PWY-5667	CDP-diacylglycerol biosynthesis I
NIES39_R00770	PWY-5981	CDP-diacylglycerol biosynthesis III
NIES39_R00770	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
NIES39_R00770	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
NIES39_R01380	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
NIES39_R01380	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
