LL3_00001	SSF48295	TrpR-like
LL3_00001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00002	SSF55979	DNA clamp
LL3_00003	SSF55174	Alpha-L RNA-binding motif
LL3_00004	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00006	SSF54211	Ribosomal protein S5 domain 2-like
LL3_00006	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00006	SSF56719	Type II DNA topoisomerase
LL3_00007	SSF101904	GyrA/ParC C-terminal domain-like
LL3_00007	SSF56719	Type II DNA topoisomerase
LL3_00009	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
LL3_00009	SSF54631	CBS-domain pair
LL3_00010	SSF56601	beta-lactamase/transpeptidase-like
LL3_00010	SSF69189	Penicillin-binding protein associated domain
LL3_00011	SSF51366	Ribulose-phoshate binding barrel
LL3_00012	SSF52317	Class I glutamine amidotransferase-like
LL3_00013	SSF46589	tRNA-binding arm
LL3_00013	SSF55681	Class II aaRS and biotin synthetases
LL3_00014	SSF110738	Glycerate kinase I
LL3_00015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00016	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00017	SSF51445	(Trans)glycosidases
LL3_00017	SSF54106	LysM domain
LL3_00018	SSF52499	Isochorismatase-like hydrolases
LL3_00019	SSF53927	Cytidine deaminase-like
LL3_00021	SSF48019	post-AAA+ oligomerization domain-like
LL3_00021	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00022	SSF82607	YbaB-like
LL3_00023	SSF111304	Recombination protein RecR
LL3_00029	SSF53383	PLP-dependent transferases
LL3_00029	SSF55904	Ornithine decarboxylase C-terminal domain
LL3_00030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00031	SSF54913	GlnB-like
LL3_00032	SSF158397	TM1646-like
LL3_00033	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00036	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_00037	SSF82771	GIY-YIG endonuclease
LL3_00038	SSF53790	Tetrapyrrole methylase
LL3_00039	SSF89447	AbrB/MazE/MraZ-like
LL3_00040	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
LL3_00040	SSF50249	Nucleic acid-binding proteins
LL3_00040	SSF52374	Nucleotidylyl transferase
LL3_00041	SSF51556	Metallo-dependent hydrolases
LL3_00042	SSF50685	Barwin-like endoglucanases
LL3_00043	SSF110455	Toprim domain
LL3_00044	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_00048	SSF54211	Ribosomal protein S5 domain 2-like
LL3_00048	SSF55060	GHMP Kinase, C-terminal domain
LL3_00049	SSF46785	"Winged helix" DNA-binding domain
LL3_00049	SSF53271	PRTase-like
LL3_00050	SSF55298	YjgF-like
LL3_00051	SSF160537	SpoVG-like
LL3_00052	SSF51161	Trimeric LpxA-like enzymes
LL3_00052	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00053	SSF53271	PRTase-like
LL3_00054	SSF50715	Ribosomal protein L25-like
LL3_00055	SSF53178	Peptidyl-tRNA hydrolase-like
LL3_00057	SSF141259	CarD-like
LL3_00057	SSF143517	TRCF domain-like
LL3_00057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00058	SSF55781	GAF domain-like
LL3_00058	SSF89447	AbrB/MazE/MraZ-like
LL3_00060	SSF101386	all-alpha NTP pyrophosphatases
LL3_00060	SSF53790	Tetrapyrrole methylase
LL3_00061	SSF55174	Alpha-L RNA-binding motif
LL3_00065	SSF50249	Nucleic acid-binding proteins
LL3_00066	SSF81606	PP2C-like
LL3_00067	SSF53300	vWA-like
LL3_00068	SSF56112	Protein kinase-like (PK-like)
LL3_00069	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_00069	SSF56037	PheT/TilS domain
LL3_00069	SSF82829	MesJ substrate recognition domain-like
LL3_00070	SSF53271	PRTase-like
LL3_00071	SSF140990	FtsH protease domain-like
LL3_00071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00072	SSF53067	Actin-like ATPase domain
LL3_00073	SSF118352	HSP33 redox switch-like
LL3_00073	SSF64397	Hsp33 domain
LL3_00074	SSF109998	Triger factor/SurA peptide-binding domain-like
LL3_00074	SSF54534	FKBP-like
LL3_00075	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
LL3_00076	SSF56322	ADC synthase
LL3_00077	SSF52317	Class I glutamine amidotransferase-like
LL3_00078	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
LL3_00079	SSF51717	Dihydropteroate synthetase-like
LL3_00080	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
LL3_00081	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
LL3_00082	SSF47413	lambda repressor-like DNA-binding domains
LL3_00083	SSF51395	FMN-linked oxidoreductases
LL3_00084	SSF50249	Nucleic acid-binding proteins
LL3_00084	SSF55681	Class II aaRS and biotin synthetases
LL3_00086	SSF46600	C-terminal UvrC-binding domain of UvrB
LL3_00087	SSF55931	Glutamine synthetase/guanido kinase
LL3_00088	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00088	SSF81923	Double Clp-N motif
LL3_00089	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00089	SSF54211	Ribosomal protein S5 domain 2-like
LL3_00090	SSF143597	YojJ-like
LL3_00090	SSF47781	RuvA domain 2-like
LL3_00091	SSF88723	PIN domain-like
LL3_00092	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00093	SSF69765	IpsF-like
LL3_00094	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
LL3_00094	SSF52374	Nucleotidylyl transferase
LL3_00096	SSF51161	Trimeric LpxA-like enzymes
LL3_00097	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
LL3_00097	SSF52374	Nucleotidylyl transferase
LL3_00098	SSF69065	RNase III domain-like
LL3_00099	SSF55315	L30e-like
LL3_00099	SSF75217	alpha/beta knot
LL3_00101	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_00101	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_00102	SSF57829	Zn-binding ribosomal proteins
LL3_00104	SSF50104	Translation proteins SH3-like domain
LL3_00104	SSF82679	N-utilization substance G protein NusG, N-terminal domain
LL3_00105	SSF46906	Ribosomal protein L11, C-terminal domain
LL3_00105	SSF54747	Ribosomal L11/L12e N-terminal domain
LL3_00106	SSF56808	Ribosomal protein L1
LL3_00107	SSF160369	Ribosomal protein L10-like
LL3_00108	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
LL3_00108	SSF54736	ClpS-like
LL3_00109	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_00110	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
LL3_00111	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
LL3_00112	SSF55315	L30e-like
LL3_00113	SSF47973	Ribosomal protein S7
LL3_00114	SSF50447	Translation proteins
LL3_00114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00114	SSF54211	Ribosomal protein S5 domain 2-like
LL3_00114	SSF54980	EF-G C-terminal domain-like
LL3_00115	SSF50447	Translation proteins
LL3_00115	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
LL3_00115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00116	SSF53474	alpha/beta-Hydrolases
LL3_00118	SSF50447	Translation proteins
LL3_00119	SSF52166	Ribosomal protein L4
LL3_00120	SSF54189	Ribosomal proteins S24e, L23 and L15e
LL3_00121	SSF50104	Translation proteins SH3-like domain
LL3_00121	SSF50249	Nucleic acid-binding proteins
LL3_00122	SSF54570	Ribosomal protein S19
LL3_00123	SSF54814	Prokaryotic type KH domain (KH-domain type II)
LL3_00123	SSF54821	Ribosomal protein S3 C-terminal domain
LL3_00124	SSF54686	Ribosomal protein L16p/L10e
LL3_00125	SSF46561	Ribosomal protein L29 (L29p)
LL3_00126	SSF50249	Nucleic acid-binding proteins
LL3_00127	SSF50104	Translation proteins SH3-like domain
LL3_00128	SSF55282	RL5-like
LL3_00129	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
LL3_00130	SSF56047	Ribosomal protein S8
LL3_00131	SSF56053	Ribosomal protein L6
LL3_00132	SSF53137	Translational machinery components
LL3_00133	SSF54211	Ribosomal protein S5 domain 2-like
LL3_00133	SSF54768	dsRNA-binding domain-like
LL3_00134	SSF55129	Ribosomal protein L30p/L7e
LL3_00135	SSF52080	Ribosomal proteins L15p and L18e
LL3_00136	SSF103491	Preprotein translocase SecY subunit
LL3_00137	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00138	SSF55920	Creatinase/aminopeptidase
LL3_00139	SSF57840	Ribosomal protein L36
LL3_00140	SSF46946	S13-like H2TH domain
LL3_00141	SSF47789	C-terminal domain of RNA polymerase alpha subunit
LL3_00141	SSF55257	RBP11-like subunits of RNA polymerase
LL3_00141	SSF56553	Insert subdomain of RNA polymerase alpha subunit
LL3_00142	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00143	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00145	SSF55120	Pseudouridine synthase
LL3_00146	SSF52161	Ribosomal protein L13
LL3_00148	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_00150	SSF53187	Zn-dependent exopeptidases
LL3_00151	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00154	SSF88713	Glycoside hydrolase/deacetylase
LL3_00156	SSF103473	MFS general substrate transporter
LL3_00157	SSF53383	PLP-dependent transferases
LL3_00158	SSF56655	Carbohydrate phosphatase
LL3_00159	SSF50129	GroES-like
LL3_00159	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00161	SSF52091	SpoIIaa-like
LL3_00163	SSF53474	alpha/beta-Hydrolases
LL3_00164	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_00165	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_00166	SSF53807	"Helical backbone" metal receptor
LL3_00167	SSF46689	Homeodomain-like
LL3_00167	SSF53807	"Helical backbone" metal receptor
LL3_00169	SSF51445	(Trans)glycosidases
LL3_00169	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
LL3_00170	SSF56601	beta-lactamase/transpeptidase-like
LL3_00171	SSF55604	Glucose permease domain IIB
LL3_00173	SSF53697	SIS domain
LL3_00174	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00176	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_00176	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_00178	SSF143597	YojJ-like
LL3_00180	SSF53738	Phosphoglucomutase, first 3 domains
LL3_00180	SSF55957	Phosphoglucomutase, C-terminal domain
LL3_00183	SSF53697	SIS domain
LL3_00183	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_00189	SSF51430	NAD(P)-linked oxidoreductase
LL3_00192	SSF46785	"Winged helix" DNA-binding domain
LL3_00194	SSF56784	HAD-like
LL3_00195	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00196	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_00196	SSF52172	CheY-like
LL3_00197	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00207	SSF51695	PLC-like phosphodiesterases
LL3_00208	SSF103473	MFS general substrate transporter
LL3_00211	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
LL3_00211	SSF56645	Acyl-CoA dehydrogenase NM domain-like
LL3_00214	SSF47413	lambda repressor-like DNA-binding domains
LL3_00215	SSF56796	Dehydroquinate synthase-like
LL3_00216	SSF52440	PreATP-grasp domain
LL3_00216	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_00222	SSF52821	Rhodanese/Cell cycle control phosphatase
LL3_00223	SSF118215	Proton glutamate symport protein
LL3_00225	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
LL3_00227	SSF82282	Homocysteine S-methyltransferase
LL3_00229	SSF56601	beta-lactamase/transpeptidase-like
LL3_00231	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00232	SSF52172	CheY-like
LL3_00233	SSF56112	Protein kinase-like (PK-like)
LL3_00234	SSF57938	DnaJ/Hsp40 cysteine-rich domain
LL3_00237	SSF160240	Cation efflux protein cytoplasmic domain-like
LL3_00237	SSF161111	Cation efflux protein transmembrane domain-like
LL3_00238	SSF55469	FMN-dependent nitroreductase-like
LL3_00241	SSF52833	Thioredoxin-like
LL3_00247	SSF56300	Metallo-dependent phosphatases
LL3_00250	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
LL3_00251	SSF53383	PLP-dependent transferases
LL3_00252	SSF103473	MFS general substrate transporter
LL3_00253	SSF46689	Homeodomain-like
LL3_00253	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_00255	SSF53474	alpha/beta-Hydrolases
LL3_00256	SSF53474	alpha/beta-Hydrolases
LL3_00258	SSF103642	Sec-C motif
LL3_00258	SSF47954	Cyclin-like
LL3_00259	SSF51430	NAD(P)-linked oxidoreductase
LL3_00263	SSF55166	Hedgehog/DD-peptidase
LL3_00264	SSF48452	TPR-like
LL3_00265	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00266	SSF51011	Glycosyl hydrolase domain
LL3_00266	SSF51445	(Trans)glycosidases
LL3_00268	SSF46785	"Winged helix" DNA-binding domain
LL3_00269	SSF53807	"Helical backbone" metal receptor
LL3_00270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00271	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_00273	SSF51679	Bacterial luciferase-like
LL3_00280	SSF103473	MFS general substrate transporter
LL3_00281	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00281	SSF54631	CBS-domain pair
LL3_00282	SSF161098	MetI-like
LL3_00283	SSF53850	Periplasmic binding protein-like II
LL3_00284	SSF53187	Zn-dependent exopeptidases
LL3_00284	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_00288	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00288	SSF56327	LDH C-terminal domain-like
LL3_00289	SSF103473	MFS general substrate transporter
LL3_00290	SSF46785	"Winged helix" DNA-binding domain
LL3_00295	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_00296	SSF51658	Xylose isomerase-like
LL3_00297	SSF103473	MFS general substrate transporter
LL3_00298	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00299	SSF53474	alpha/beta-Hydrolases
LL3_00301	SSF51730	FAD-linked oxidoreductase
LL3_00302	SSF53720	ALDH-like
LL3_00305	SSF51905	FAD/NAD(P)-binding domain
LL3_00306	SSF53790	Tetrapyrrole methylase
LL3_00306	SSF69618	HemD-like
LL3_00307	SSF50022	ISP domain
LL3_00308	SSF51905	FAD/NAD(P)-binding domain
LL3_00308	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
LL3_00308	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
LL3_00309	SSF103473	MFS general substrate transporter
LL3_00310	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00311	SSF50129	GroES-like
LL3_00311	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00314	SSF51445	(Trans)glycosidases
LL3_00317	SSF53697	SIS domain
LL3_00318	SSF51366	Ribulose-phoshate binding barrel
LL3_00319	SSF46785	"Winged helix" DNA-binding domain
LL3_00321	SSF47336	ACP-like
LL3_00321	SSF52777	CoA-dependent acyltransferases
LL3_00321	SSF56801	Acetyl-CoA synthetase-like
LL3_00322	SSF47336	ACP-like
LL3_00322	SSF52777	CoA-dependent acyltransferases
LL3_00322	SSF56801	Acetyl-CoA synthetase-like
LL3_00323	SSF47336	ACP-like
LL3_00323	SSF52777	CoA-dependent acyltransferases
LL3_00323	SSF53474	alpha/beta-Hydrolases
LL3_00323	SSF56801	Acetyl-CoA synthetase-like
LL3_00324	SSF53474	alpha/beta-Hydrolases
LL3_00327	SSF56214	4'-phosphopantetheinyl transferase
LL3_00329	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00330	SSF161098	MetI-like
LL3_00331	SSF53850	Periplasmic binding protein-like II
LL3_00332	SSF46785	"Winged helix" DNA-binding domain
LL3_00332	SSF53850	Periplasmic binding protein-like II
LL3_00333	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
LL3_00334	SSF143968	UbiD C-terminal domain-like
LL3_00334	SSF50475	FMN-binding split barrel
LL3_00337	SSF103473	MFS general substrate transporter
LL3_00338	SSF51126	Pectin lyase-like
LL3_00344	SSF51679	Bacterial luciferase-like
LL3_00345	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00346	SSF53850	Periplasmic binding protein-like II
LL3_00348	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00349	SSF53187	Zn-dependent exopeptidases
LL3_00349	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_00350	SSF103378	2-methylcitrate dehydratase PrpD
LL3_00351	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00354	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_00354	SSF52172	CheY-like
LL3_00355	SSF158472	HAMP domain-like
LL3_00355	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_00355	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00357	SSF48452	TPR-like
LL3_00361	SSF53633	Carbamate kinase-like
LL3_00361	SSF55021	ACT-like
LL3_00363	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_00364	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_00365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00366	SSF53807	"Helical backbone" metal receptor
LL3_00367	SSF103473	MFS general substrate transporter
LL3_00368	SSF46689	Homeodomain-like
LL3_00369	SSF55469	FMN-dependent nitroreductase-like
LL3_00370	SSF54909	Dimeric alpha+beta barrel
LL3_00371	SSF46785	"Winged helix" DNA-binding domain
LL3_00372	SSF46785	"Winged helix" DNA-binding domain
LL3_00372	SSF53383	PLP-dependent transferases
LL3_00373	SSF53383	PLP-dependent transferases
LL3_00374	SSF53720	ALDH-like
LL3_00375	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_00376	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00378	SSF81296	E set domains
LL3_00379	SSF160387	NosL/MerB-like
LL3_00379	SSF46785	"Winged helix" DNA-binding domain
LL3_00382	SSF52794	PTS system IIB component-like
LL3_00383	SSF55804	Phoshotransferase/anion transport protein
LL3_00384	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_00384	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00385	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
LL3_00387	SSF56784	HAD-like
LL3_00388	SSF88713	Glycoside hydrolase/deacetylase
LL3_00390	SSF160920	PSTPO5379-like
LL3_00391	SSF160467	PH0987 N-terminal domain-like
LL3_00391	SSF50891	Cyclophilin-like
LL3_00392	SSF50891	Cyclophilin-like
LL3_00393	SSF46785	"Winged helix" DNA-binding domain
LL3_00393	SSF55781	GAF domain-like
LL3_00394	SSF52266	SGNH hydrolase
LL3_00396	SSF54909	Dimeric alpha+beta barrel
LL3_00397	SSF54427	NTF2-like
LL3_00397	SSF56519	Penicillin binding protein dimerisation domain
LL3_00397	SSF56601	beta-lactamase/transpeptidase-like
LL3_00398	SSF51430	NAD(P)-linked oxidoreductase
LL3_00400	SSF46785	"Winged helix" DNA-binding domain
LL3_00400	SSF52794	PTS system IIB component-like
LL3_00400	SSF55804	Phoshotransferase/anion transport protein
LL3_00400	SSF63520	PTS-regulatory domain, PRD
LL3_00401	SSF56801	Acetyl-CoA synthetase-like
LL3_00403	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00404	SSF51182	RmlC-like cupins
LL3_00405	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00406	SSF50475	FMN-binding split barrel
LL3_00409	SSF46785	"Winged helix" DNA-binding domain
LL3_00409	SSF54909	Dimeric alpha+beta barrel
LL3_00410	SSF56712	Prokaryotic type I DNA topoisomerase
LL3_00412	SSF48208	Six-hairpin glycosidases
LL3_00413	SSF55073	Nucleotide cyclase
LL3_00415	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00418	SSF52467	DHS-like NAD/FAD-binding domain
LL3_00418	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_00419	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00422	SSF54001	Cysteine proteinases
LL3_00423	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
LL3_00425	SSF48452	TPR-like
LL3_00436	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_00439	SSF51182	RmlC-like cupins
LL3_00440	SSF54909	Dimeric alpha+beta barrel
LL3_00441	SSF47240	Ferritin-like
LL3_00443	SSF103190	Sensory domain-like
LL3_00443	SSF55785	PYP-like sensor domain (PAS domain)
LL3_00443	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00443	SSF55890	Sporulation response regulatory protein Spo0B
LL3_00444	SSF46785	"Winged helix" DNA-binding domain
LL3_00444	SSF52172	CheY-like
LL3_00445	SSF118215	Proton glutamate symport protein
LL3_00447	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00453	SSF160240	Cation efflux protein cytoplasmic domain-like
LL3_00453	SSF161111	Cation efflux protein transmembrane domain-like
LL3_00454	SSF52833	Thioredoxin-like
LL3_00455	SSF52440	PreATP-grasp domain
LL3_00455	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_00456	SSF53244	MurD-like peptide ligases, peptide-binding domain
LL3_00456	SSF53623	MurD-like peptide ligases, catalytic domain
LL3_00456	SSF63418	MurE/MurF N-terminal domain
LL3_00458	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00461	SSF144091	Rhomboid-like
LL3_00462	SSF56214	4'-phosphopantetheinyl transferase
LL3_00463	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
LL3_00465	SSF50621	Alanine racemase C-terminal domain-like
LL3_00465	SSF51419	PLP-binding barrel
LL3_00466	SSF47598	Ribbon-helix-helix
LL3_00467	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
LL3_00468	SSF52091	SpoIIaa-like
LL3_00469	SSF52091	SpoIIaa-like
LL3_00470	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00471	SSF101215	KaiA/RbsU domain
LL3_00471	SSF81606	PP2C-like
LL3_00472	SSF52091	SpoIIaa-like
LL3_00473	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00474	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_00474	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_00475	SSF81606	PP2C-like
LL3_00476	SSF158832	Tex N-terminal region-like
LL3_00476	SSF47781	RuvA domain 2-like
LL3_00476	SSF50249	Nucleic acid-binding proteins
LL3_00476	SSF53098	Ribonuclease H-like
LL3_00479	SSF53474	alpha/beta-Hydrolases
LL3_00480	SSF82784	OsmC-like
LL3_00481	SSF46785	"Winged helix" DNA-binding domain
LL3_00485	SSF52218	Flavoproteins
LL3_00486	SSF50249	Nucleic acid-binding proteins
LL3_00490	SSF53681	Aspartate/glutamate racemase
LL3_00492	SSF46785	"Winged helix" DNA-binding domain
LL3_00494	SSF46785	"Winged helix" DNA-binding domain
LL3_00494	SSF53383	PLP-dependent transferases
LL3_00495	SSF103473	MFS general substrate transporter
LL3_00496	SSF52151	FabD/lysophospholipase-like
LL3_00498	SSF56176	FAD-binding/transporter-associated domain-like
LL3_00499	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_00501	SSF160240	Cation efflux protein cytoplasmic domain-like
LL3_00501	SSF161111	Cation efflux protein transmembrane domain-like
LL3_00503	SSF51182	RmlC-like cupins
LL3_00504	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00505	SSF46689	Homeodomain-like
LL3_00505	SSF55136	Probable bacterial effector-binding domain
LL3_00507	SSF102114	Radical SAM enzymes
LL3_00510	SSF50129	GroES-like
LL3_00510	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00512	SSF46955	Putative DNA-binding domain
LL3_00515	SSF46785	"Winged helix" DNA-binding domain
LL3_00515	SSF53383	PLP-dependent transferases
LL3_00516	SSF50475	FMN-binding split barrel
LL3_00517	SSF103473	MFS general substrate transporter
LL3_00518	SSF46689	Homeodomain-like
LL3_00518	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_00519	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_00520	SSF46785	"Winged helix" DNA-binding domain
LL3_00520	SSF53383	PLP-dependent transferases
LL3_00523	SSF50129	GroES-like
LL3_00523	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00526	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
LL3_00527	SSF52317	Class I glutamine amidotransferase-like
LL3_00528	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00529	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00531	SSF56796	Dehydroquinate synthase-like
LL3_00532	SSF103473	MFS general substrate transporter
LL3_00533	SSF53901	Thiolase-like
LL3_00534	SSF47413	lambda repressor-like DNA-binding domains
LL3_00536	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00537	SSF46955	Putative DNA-binding domain
LL3_00537	SSF55136	Probable bacterial effector-binding domain
LL3_00539	SSF55811	Nudix
LL3_00540	SSF53474	alpha/beta-Hydrolases
LL3_00541	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
LL3_00542	SSF46785	"Winged helix" DNA-binding domain
LL3_00542	SSF48008	GntR ligand-binding domain-like
LL3_00544	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_00548	SSF56601	beta-lactamase/transpeptidase-like
LL3_00552	SSF103473	MFS general substrate transporter
LL3_00553	SSF46785	"Winged helix" DNA-binding domain
LL3_00553	SSF64288	Chorismate lyase-like
LL3_00554	SSF46785	"Winged helix" DNA-binding domain
LL3_00554	SSF48008	GntR ligand-binding domain-like
LL3_00555	SSF103473	MFS general substrate transporter
LL3_00556	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_00557	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_00558	SSF46689	Homeodomain-like
LL3_00558	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_00560	SSF47240	Ferritin-like
LL3_00561	SSF55961	Bet v1-like
LL3_00562	SSF50129	GroES-like
LL3_00562	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00563	SSF103473	MFS general substrate transporter
LL3_00564	SSF55326	PurM N-terminal domain-like
LL3_00564	SSF56042	PurM C-terminal domain-like
LL3_00565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00566	SSF53067	Actin-like ATPase domain
LL3_00567	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00568	SSF53067	Actin-like ATPase domain
LL3_00569	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00570	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
LL3_00571	SSF46785	"Winged helix" DNA-binding domain
LL3_00571	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00576	SSF50129	GroES-like
LL3_00577	SSF48592	GroEL equatorial domain-like
LL3_00577	SSF52029	GroEL apical domain-like
LL3_00577	SSF54849	GroEL-intermediate domain like
LL3_00578	SSF56349	DNA breaking-rejoining enzymes
LL3_00581	SSF47413	lambda repressor-like DNA-binding domains
LL3_00588	SSF160713	YqaI-like
LL3_00590	SSF52980	Restriction endonuclease-like
LL3_00593	SSF158499	DnaD domain-like
LL3_00594	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00596	SSF159006	YopX-like
LL3_00602	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_00604	SSF101386	all-alpha NTP pyrophosphatases
LL3_00605	SSF159006	YopX-like
LL3_00611	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_00615	SSF50494	Trypsin-like serine proteases
LL3_00623	SSF49265	Fibronectin type III
LL3_00640	SSF47090	PGBD-like
LL3_00640	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
LL3_00645	SSF47090	PGBD-like
LL3_00645	SSF51445	(Trans)glycosidases
LL3_00647	SSF48452	TPR-like
LL3_00647	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00649	SSF50129	GroES-like
LL3_00649	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00650	SSF103473	MFS general substrate transporter
LL3_00651	SSF53613	Ribokinase-like
LL3_00656	SSF117892	Band 7/SPFH domain
LL3_00657	SSF52266	SGNH hydrolase
LL3_00660	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_00660	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_00661	SSF50129	GroES-like
LL3_00661	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00663	SSF69304	Tricorn protease N-terminal domain
LL3_00666	SSF49503	Cupredoxins
LL3_00669	SSF160240	Cation efflux protein cytoplasmic domain-like
LL3_00669	SSF161111	Cation efflux protein transmembrane domain-like
LL3_00670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00672	SSF54001	Cysteine proteinases
LL3_00674	SSF52317	Class I glutamine amidotransferase-like
LL3_00674	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_00674	SSF54810	GMP synthetase C-terminal dimerisation domain
LL3_00675	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_00675	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_00684	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
LL3_00685	SSF51246	Rudiment single hybrid motif
LL3_00685	SSF52440	PreATP-grasp domain
LL3_00685	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_00686	SSF48557	L-aspartase-like
LL3_00687	SSF56104	SAICAR synthase-like
LL3_00688	SSF82697	PurS-like
LL3_00689	SSF52317	Class I glutamine amidotransferase-like
LL3_00690	SSF55326	PurM N-terminal domain-like
LL3_00690	SSF56042	PurM C-terminal domain-like
LL3_00691	SSF53271	PRTase-like
LL3_00691	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_00692	SSF55326	PurM N-terminal domain-like
LL3_00692	SSF56042	PurM C-terminal domain-like
LL3_00693	SSF53328	Formyltransferase
LL3_00694	SSF52335	Methylglyoxal synthase-like
LL3_00694	SSF53927	Cytidine deaminase-like
LL3_00695	SSF51246	Rudiment single hybrid motif
LL3_00695	SSF52440	PreATP-grasp domain
LL3_00695	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_00696	SSF46785	"Winged helix" DNA-binding domain
LL3_00696	SSF54909	Dimeric alpha+beta barrel
LL3_00699	SSF51338	Composite domain of metallo-dependent hydrolases
LL3_00699	SSF51556	Metallo-dependent hydrolases
LL3_00700	SSF159774	YerB-like
LL3_00701	SSF48295	TrpR-like
LL3_00702	SSF51395	FMN-linked oxidoreductases
LL3_00704	SSF51395	FMN-linked oxidoreductases
LL3_00705	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00706	SSF47781	RuvA domain 2-like
LL3_00706	SSF50249	Nucleic acid-binding proteins
LL3_00706	SSF52113	BRCT domain
LL3_00706	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
LL3_00708	SSF56112	Protein kinase-like (PK-like)
LL3_00711	SSF141000	Glu-tRNAGln amidotransferase C subunit
LL3_00712	SSF75304	Amidase signature (AS) enzymes
LL3_00713	SSF55931	Glutamine synthetase/guanido kinase
LL3_00713	SSF89095	GatB/YqeY motif
LL3_00714	SSF46689	Homeodomain-like
LL3_00715	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
LL3_00715	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
LL3_00715	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
LL3_00716	SSF111331	NAD kinase/diacylglycerol kinase-like
LL3_00717	SSF50249	Nucleic acid-binding proteins
LL3_00717	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_00718	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00719	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00721	SSF160424	BH3703-like
LL3_00722	SSF160424	BH3703-like
LL3_00723	SSF160424	BH3703-like
LL3_00726	SSF75625	YebC-like
LL3_00728	SSF81301	Nucleotidyltransferase
LL3_00728	SSF81631	PAP/OAS1 substrate-binding domain
LL3_00731	SSF47240	Ferritin-like
LL3_00732	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00735	SSF54909	Dimeric alpha+beta barrel
LL3_00736	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_00742	SSF46785	"Winged helix" DNA-binding domain
LL3_00743	SSF51905	FAD/NAD(P)-binding domain
LL3_00745	SSF48264	Cytochrome P450
LL3_00745	SSF52218	Flavoproteins
LL3_00745	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
LL3_00745	SSF63380	Riboflavin synthase domain-like
LL3_00747	SSF53649	Alkaline phosphatase-like
LL3_00749	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00750	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00751	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00752	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00753	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00754	SSF103473	MFS general substrate transporter
LL3_00756	SSF53720	ALDH-like
LL3_00757	SSF103190	Sensory domain-like
LL3_00757	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_00758	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00759	SSF48452	TPR-like
LL3_00759	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00762	SSF46955	Putative DNA-binding domain
LL3_00763	SSF103473	MFS general substrate transporter
LL3_00764	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00766	SSF50129	GroES-like
LL3_00766	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00767	SSF140688	YfmB-like
LL3_00769	SSF51126	Pectin lyase-like
LL3_00776	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_00776	SSF49785	Galactose-binding domain-like
LL3_00776	SSF52172	CheY-like
LL3_00776	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00777	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_00777	SSF52172	CheY-like
LL3_00778	SSF49401	Bacterial adhesins
LL3_00778	SSF49478	Cna protein B-type domain
LL3_00779	SSF63817	Sortase
LL3_00781	SSF103190	Sensory domain-like
LL3_00781	SSF55785	PYP-like sensor domain (PAS domain)
LL3_00781	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_00781	SSF55890	Sporulation response regulatory protein Spo0B
LL3_00782	SSF52172	CheY-like
LL3_00783	SSF53850	Periplasmic binding protein-like II
LL3_00785	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_00786	SSF56512	Nitric oxide (NO) synthase oxygenase domain
LL3_00787	SSF54975	Acylphosphatase/BLUF domain-like
LL3_00788	SSF50800	PK beta-barrel domain-like
LL3_00792	SSF55920	Creatinase/aminopeptidase
LL3_00793	SSF55604	Glucose permease domain IIB
LL3_00795	SSF53649	Alkaline phosphatase-like
LL3_00797	SSF49764	HSP20-like chaperones
LL3_00800	SSF55604	Glucose permease domain IIB
LL3_00801	SSF51011	Glycosyl hydrolase domain
LL3_00801	SSF51445	(Trans)glycosidases
LL3_00802	SSF46785	"Winged helix" DNA-binding domain
LL3_00802	SSF64288	Chorismate lyase-like
LL3_00803	SSF55469	FMN-dependent nitroreductase-like
LL3_00806	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
LL3_00806	SSF56300	Metallo-dependent phosphatases
LL3_00807	SSF52317	Class I glutamine amidotransferase-like
LL3_00808	SSF47413	lambda repressor-like DNA-binding domains
LL3_00808	SSF53822	Periplasmic binding protein-like I
LL3_00809	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00809	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_00810	SSF51569	Aldolase
LL3_00811	SSF103473	MFS general substrate transporter
LL3_00813	SSF52788	Phosphotyrosine protein phosphatases I
LL3_00816	SSF103473	MFS general substrate transporter
LL3_00819	SSF50182	Sm-like ribonucleoproteins
LL3_00819	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
LL3_00820	SSF102114	Radical SAM enzymes
LL3_00822	SSF88713	Glycoside hydrolase/deacetylase
LL3_00823	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_00823	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00825	SSF143865	CorA soluble domain-like
LL3_00825	SSF144083	Magnesium transport protein CorA, transmembrane region
LL3_00826	SSF48150	DNA-glycosylase
LL3_00827	SSF50249	Nucleic acid-binding proteins
LL3_00827	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_00828	SSF52743	Subtilisin-like
LL3_00829	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00829	SSF90123	ABC transporter transmembrane region
LL3_00830	SSF158745	LanC-like
LL3_00830	SSF56112	Protein kinase-like (PK-like)
LL3_00834	SSF51395	FMN-linked oxidoreductases
LL3_00837	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_00838	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_00838	SSF52922	TK C-terminal domain-like
LL3_00839	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
LL3_00839	SSF51230	Single hybrid motif
LL3_00839	SSF52777	CoA-dependent acyltransferases
LL3_00840	SSF51905	FAD/NAD(P)-binding domain
LL3_00840	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
LL3_00841	SSF46689	Homeodomain-like
LL3_00841	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00843	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00843	SSF56327	LDH C-terminal domain-like
LL3_00844	SSF46689	Homeodomain-like
LL3_00844	SSF53697	SIS domain
LL3_00845	SSF55604	Glucose permease domain IIB
LL3_00846	SSF51126	Pectin lyase-like
LL3_00847	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00847	SSF90123	ABC transporter transmembrane region
LL3_00848	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00848	SSF90123	ABC transporter transmembrane region
LL3_00850	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_00854	SSF46785	"Winged helix" DNA-binding domain
LL3_00855	SSF52218	Flavoproteins
LL3_00858	SSF52038	Barstar-related
LL3_00859	SSF109854	DinB/YfiT-like putative metalloenzymes
LL3_00860	SSF103473	MFS general substrate transporter
LL3_00861	SSF46785	"Winged helix" DNA-binding domain
LL3_00862	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_00863	SSF54506	Diaminopimelate epimerase-like
LL3_00864	SSF55469	FMN-dependent nitroreductase-like
LL3_00867	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00869	SSF101697	Hypothetical protein YfhH
LL3_00873	SSF50494	Trypsin-like serine proteases
LL3_00879	SSF53474	alpha/beta-Hydrolases
LL3_00881	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_00886	SSF56349	DNA breaking-rejoining enzymes
LL3_00889	SSF47413	lambda repressor-like DNA-binding domains
LL3_00899	SSF48024	N-terminal domain of DnaB helicase
LL3_00899	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00902	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_00903	SSF46785	"Winged helix" DNA-binding domain
LL3_00910	SSF52096	ClpP/crotonase
LL3_00911	SSF56563	Major capsid protein gp5
LL3_00923	SSF52266	SGNH hydrolase
LL3_00924	SSF58100	Bacterial hemolysins
LL3_00929	SSF47090	PGBD-like
LL3_00929	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
LL3_00933	SSF48150	DNA-glycosylase
LL3_00933	SSF55811	Nudix
LL3_00935	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_00939	SSF159234	FomD-like
LL3_00940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00940	SSF90123	ABC transporter transmembrane region
LL3_00942	SSF53383	PLP-dependent transferases
LL3_00943	SSF52833	Thioredoxin-like
LL3_00944	SSF46785	"Winged helix" DNA-binding domain
LL3_00949	SSF52317	Class I glutamine amidotransferase-like
LL3_00954	SSF53850	Periplasmic binding protein-like II
LL3_00955	SSF161098	MetI-like
LL3_00956	SSF161098	MetI-like
LL3_00957	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00958	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00959	SSF56634	Heme-dependent catalase-like
LL3_00960	SSF51556	Metallo-dependent hydrolases
LL3_00962	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00963	SSF53850	Periplasmic binding protein-like II
LL3_00964	SSF161098	MetI-like
LL3_00965	SSF51679	Bacterial luciferase-like
LL3_00967	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
LL3_00969	SSF47413	lambda repressor-like DNA-binding domains
LL3_00970	SSF56037	PheT/TilS domain
LL3_00971	SSF48371	ARM repeat
LL3_00971	SSF54862	4Fe-4S ferredoxins
LL3_00973	SSF75217	alpha/beta knot
LL3_00978	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00981	SSF46785	"Winged helix" DNA-binding domain
LL3_00982	SSF51230	Single hybrid motif
LL3_00983	SSF103473	MFS general substrate transporter
LL3_00984	SSF52218	Flavoproteins
LL3_00987	SSF46785	"Winged helix" DNA-binding domain
LL3_00988	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00989	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_00991	SSF50249	Nucleic acid-binding proteins
LL3_00992	SSF53850	Periplasmic binding protein-like II
LL3_00993	SSF55073	Nucleotide cyclase
LL3_00994	SSF118215	Proton glutamate symport protein
LL3_00995	SSF53187	Zn-dependent exopeptidases
LL3_01000	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
LL3_01000	SSF56300	Metallo-dependent phosphatases
LL3_01001	SSF63817	Sortase
LL3_01002	SSF55120	Pseudouridine synthase
LL3_01004	SSF54631	CBS-domain pair
LL3_01005	SSF56784	HAD-like
LL3_01006	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01006	SSF56317	Carbon-nitrogen hydrolase
LL3_01007	SSF53383	PLP-dependent transferases
LL3_01008	SSF110391	GlpP-like
LL3_01009	SSF81338	Aquaporin-like
LL3_01010	SSF53067	Actin-like ATPase domain
LL3_01011	SSF51905	FAD/NAD(P)-binding domain
LL3_01011	SSF54373	FAD-linked reductases, C-terminal domain
LL3_01012	SSF53738	Phosphoglucomutase, first 3 domains
LL3_01012	SSF55957	Phosphoglucomutase, C-terminal domain
LL3_01013	SSF55781	GAF domain-like
LL3_01013	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01014	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_01014	SSF52172	CheY-like
LL3_01015	SSF52218	Flavoproteins
LL3_01018	SSF54001	Cysteine proteinases
LL3_01018	SSF54106	LysM domain
LL3_01019	SSF46785	"Winged helix" DNA-binding domain
LL3_01022	SSF53649	Alkaline phosphatase-like
LL3_01024	SSF54001	Cysteine proteinases
LL3_01024	SSF54106	LysM domain
LL3_01025	SSF46785	"Winged helix" DNA-binding domain
LL3_01025	SSF53850	Periplasmic binding protein-like II
LL3_01026	SSF48256	Citrate synthase
LL3_01027	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01029	SSF161070	SNF-like
LL3_01032	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_01032	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_01033	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
LL3_01034	SSF54631	CBS-domain pair
LL3_01034	SSF56176	FAD-binding/transporter-associated domain-like
LL3_01035	SSF46955	Putative DNA-binding domain
LL3_01036	SSF53383	PLP-dependent transferases
LL3_01037	SSF53901	Thiolase-like
LL3_01039	SSF54631	CBS-domain pair
LL3_01039	SSF56176	FAD-binding/transporter-associated domain-like
LL3_01042	SSF51695	PLC-like phosphodiesterases
LL3_01044	SSF50182	Sm-like ribonucleoproteins
LL3_01044	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
LL3_01044	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
LL3_01045	SSF52467	DHS-like NAD/FAD-binding domain
LL3_01046	SSF88713	Glycoside hydrolase/deacetylase
LL3_01047	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
LL3_01048	SSF46689	Homeodomain-like
LL3_01048	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_01051	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_01054	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01054	SSF90123	ABC transporter transmembrane region
LL3_01055	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01055	SSF90123	ABC transporter transmembrane region
LL3_01056	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01061	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_01062	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_01065	SSF158622	YheA/YmcA-like
LL3_01067	SSF56784	HAD-like
LL3_01068	SSF102114	Radical SAM enzymes
LL3_01069	SSF51905	FAD/NAD(P)-binding domain
LL3_01071	SSF116726	TrkA C-terminal domain-like
LL3_01073	SSF52096	ClpP/crotonase
LL3_01075	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01077	SSF56300	Metallo-dependent phosphatases
LL3_01078	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01079	SSF109604	HD-domain/PDEase-like
LL3_01081	SSF109998	Triger factor/SurA peptide-binding domain-like
LL3_01081	SSF54534	FKBP-like
LL3_01086	SSF109915	Hypothetical protein YhaI
LL3_01087	SSF46785	"Winged helix" DNA-binding domain
LL3_01089	SSF55194	Ribosome recycling factor, RRF
LL3_01092	SSF53383	PLP-dependent transferases
LL3_01093	SSF54197	HIT-like
LL3_01094	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01097	SSF53187	Zn-dependent exopeptidases
LL3_01097	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_01099	SSF54909	Dimeric alpha+beta barrel
LL3_01100	SSF53955	Lysozyme-like
LL3_01100	SSF56601	beta-lactamase/transpeptidase-like
LL3_01101	SSF51726	UROD/MetE-like
LL3_01102	SSF53800	Chelatase
LL3_01103	SSF51905	FAD/NAD(P)-binding domain
LL3_01103	SSF54373	FAD-linked reductases, C-terminal domain
LL3_01104	SSF46689	Homeodomain-like
LL3_01104	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_01105	SSF57997	Tropomyosin
LL3_01107	SSF53901	Thiolase-like
LL3_01109	SSF101821	Aminopeptidase/glucanase lid domain
LL3_01109	SSF53187	Zn-dependent exopeptidases
LL3_01110	SSF118215	Proton glutamate symport protein
LL3_01112	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_01113	SSF55681	Class II aaRS and biotin synthetases
LL3_01113	SSF82649	SufE/NifU
LL3_01114	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01115	SSF56801	Acetyl-CoA synthetase-like
LL3_01118	SSF52743	Subtilisin-like
LL3_01118	SSF54897	Protease propeptides/inhibitors
LL3_01119	SSF53807	"Helical backbone" metal receptor
LL3_01120	SSF53254	Phosphoglycerate mutase-like
LL3_01121	SSF53901	Thiolase-like
LL3_01122	SSF56801	Acetyl-CoA synthetase-like
LL3_01124	SSF46458	Globin-like
LL3_01124	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_01125	SSF50022	ISP domain
LL3_01125	SSF51905	FAD/NAD(P)-binding domain
LL3_01126	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01129	SSF159888	YdhG-like
LL3_01130	SSF55718	SCP-like
LL3_01130	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01133	SSF117782	YbjQ-like
LL3_01138	SSF51306	LexA/Signal peptidase
LL3_01140	SSF51905	FAD/NAD(P)-binding domain
LL3_01141	SSF46785	"Winged helix" DNA-binding domain
LL3_01143	SSF103473	MFS general substrate transporter
LL3_01144	SSF46689	Homeodomain-like
LL3_01144	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_01146	SSF47240	Ferritin-like
LL3_01148	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01149	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01149	SSF52980	Restriction endonuclease-like
LL3_01150	SSF56300	Metallo-dependent phosphatases
LL3_01151	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01160	SSF140500	BAS1536-like
LL3_01162	SSF56529	FAH
LL3_01165	SSF52743	Subtilisin-like
LL3_01167	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_01167	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_01168	SSF48576	Terpenoid synthases
LL3_01170	SSF46689	Homeodomain-like
LL3_01170	SSF51215	Regulatory protein AraC
LL3_01171	SSF47413	lambda repressor-like DNA-binding domains
LL3_01171	SSF53822	Periplasmic binding protein-like I
LL3_01173	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01173	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_01174	SSF109854	DinB/YfiT-like putative metalloenzymes
LL3_01176	SSF46785	"Winged helix" DNA-binding domain
LL3_01176	SSF53383	PLP-dependent transferases
LL3_01177	SSF141571	Pentapeptide repeat-like
LL3_01178	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01179	SSF51730	FAD-linked oxidoreductase
LL3_01179	SSF82282	Homocysteine S-methyltransferase
LL3_01181	SSF89963	YajQ-like
LL3_01182	SSF50249	Nucleic acid-binding proteins
LL3_01183	SSF53822	Periplasmic binding protein-like I
LL3_01184	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_01185	SSF48264	Cytochrome P450
LL3_01187	SSF82549	DAK1/DegV-like
LL3_01192	SSF56784	HAD-like
LL3_01193	SSF53474	alpha/beta-Hydrolases
LL3_01194	SSF117916	Fe-S cluster assembly (FSCA) domain-like
LL3_01195	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_01196	SSF55103	FAD-linked oxidases, C-terminal domain
LL3_01196	SSF56176	FAD-binding/transporter-associated domain-like
LL3_01197	SSF103473	MFS general substrate transporter
LL3_01198	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01198	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_01199	SSF56266	DmpA/ArgJ-like
LL3_01200	SSF53633	Carbamate kinase-like
LL3_01201	SSF53383	PLP-dependent transferases
LL3_01202	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
LL3_01202	SSF52317	Class I glutamine amidotransferase-like
LL3_01203	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
LL3_01203	SSF52440	PreATP-grasp domain
LL3_01203	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_01204	SSF53671	Aspartate/ornithine carbamoyltransferase
LL3_01207	SSF53474	alpha/beta-Hydrolases
LL3_01209	SSF53822	Periplasmic binding protein-like I
LL3_01212	SSF53901	Thiolase-like
LL3_01213	SSF53901	Thiolase-like
LL3_01215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01216	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01217	SSF53850	Periplasmic binding protein-like II
LL3_01218	SSF161098	MetI-like
LL3_01219	SSF161098	MetI-like
LL3_01221	SSF52374	Nucleotidylyl transferase
LL3_01222	SSF53850	Periplasmic binding protein-like II
LL3_01223	SSF161098	MetI-like
LL3_01224	SSF161098	MetI-like
LL3_01225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01226	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01227	SSF51445	(Trans)glycosidases
LL3_01228	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01229	SSF52833	Thioredoxin-like
LL3_01233	SSF55486	Metalloproteases ("zincins"), catalytic domain
LL3_01235	SSF52833	Thioredoxin-like
LL3_01236	SSF46458	Globin-like
LL3_01237	SSF53955	Lysozyme-like
LL3_01238	SSF55154	CYTH-like phosphatases
LL3_01240	SSF81301	Nucleotidyltransferase
LL3_01241	SSF111331	NAD kinase/diacylglycerol kinase-like
LL3_01242	SSF55120	Pseudouridine synthase
LL3_01243	SSF56300	Metallo-dependent phosphatases
LL3_01245	SSF116726	TrkA C-terminal domain-like
LL3_01245	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01246	SSF48613	Heme oxygenase-like
LL3_01247	SSF51391	Thiamin phosphate synthase
LL3_01248	SSF51905	FAD/NAD(P)-binding domain
LL3_01248	SSF54373	FAD-linked reductases, C-terminal domain
LL3_01249	SSF54285	MoaD/ThiS
LL3_01250	SSF110399	ThiG-like
LL3_01251	SSF69572	Activating enzymes of the ubiquitin-like proteins
LL3_01252	SSF53613	Ribokinase-like
LL3_01253	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01266	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01268	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_01270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01271	SSF89447	AbrB/MazE/MraZ-like
LL3_01272	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01273	SSF55144	LigT-like
LL3_01274	SSF53474	alpha/beta-Hydrolases
LL3_01275	SSF53383	PLP-dependent transferases
LL3_01276	SSF53383	PLP-dependent transferases
LL3_01279	SSF56349	DNA breaking-rejoining enzymes
LL3_01280	SSF160631	SMI1/KNR4-like
LL3_01281	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01282	SSF160631	SMI1/KNR4-like
LL3_01283	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01285	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01297	SSF56601	beta-lactamase/transpeptidase-like
LL3_01298	SSF54909	Dimeric alpha+beta barrel
LL3_01299	SSF103473	MFS general substrate transporter
LL3_01300	SSF46785	"Winged helix" DNA-binding domain
LL3_01301	SSF51445	(Trans)glycosidases
LL3_01303	SSF52794	PTS system IIB component-like
LL3_01304	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
LL3_01305	SSF51445	(Trans)glycosidases
LL3_01306	SSF100950	NagB/RpiA/CoA transferase-like
LL3_01306	SSF46785	"Winged helix" DNA-binding domain
LL3_01307	SSF56784	HAD-like
LL3_01309	SSF46785	"Winged helix" DNA-binding domain
LL3_01314	SSF50692	ADC-like
LL3_01314	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
LL3_01314	SSF54292	2Fe-2S ferredoxin-like
LL3_01314	SSF54862	4Fe-4S ferredoxins
LL3_01316	SSF48264	Cytochrome P450
LL3_01317	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_01319	SSF69618	HemD-like
LL3_01321	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01323	SSF51182	RmlC-like cupins
LL3_01326	SSF51905	FAD/NAD(P)-binding domain
LL3_01327	SSF51556	Metallo-dependent hydrolases
LL3_01328	SSF47413	lambda repressor-like DNA-binding domains
LL3_01328	SSF53822	Periplasmic binding protein-like I
LL3_01331	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_01331	SSF52172	CheY-like
LL3_01332	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_01332	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01336	SSF109854	DinB/YfiT-like putative metalloenzymes
LL3_01337	SSF48452	TPR-like
LL3_01339	SSF47090	PGBD-like
LL3_01339	SSF54106	LysM domain
LL3_01339	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
LL3_01340	SSF50729	PH domain-like
LL3_01344	SSF47413	lambda repressor-like DNA-binding domains
LL3_01346	SSF46785	"Winged helix" DNA-binding domain
LL3_01347	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01352	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_01357	SSF56563	Major capsid protein gp5
LL3_01358	SSF116915	Hypothetical protein YqbG
LL3_01364	SSF69279	Phage tail proteins
LL3_01367	SSF53955	Lysozyme-like
LL3_01368	SSF54106	LysM domain
LL3_01369	SSF69279	Phage tail proteins
LL3_01371	SSF160719	gpW/gp25-like
LL3_01375	SSF49842	TNF-like
LL3_01376	SSF159865	XkdW-like
LL3_01381	SSF47090	PGBD-like
LL3_01381	SSF54106	LysM domain
LL3_01381	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
LL3_01386	SSF109755	PhoU-like
LL3_01388	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_01390	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_01392	SSF50156	PDZ domain-like
LL3_01392	SSF50494	Trypsin-like serine proteases
LL3_01393	SSF103473	MFS general substrate transporter
LL3_01394	SSF63992	Dipeptide transport protein
LL3_01395	SSF161098	MetI-like
LL3_01396	SSF161098	MetI-like
LL3_01397	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01398	SSF53850	Periplasmic binding protein-like II
LL3_01399	SSF141986	LD-carboxypeptidase A C-terminal domain-like
LL3_01399	SSF52317	Class I glutamine amidotransferase-like
LL3_01400	SSF51604	Enolase C-terminal domain-like
LL3_01400	SSF54826	Enolase N-terminal domain-like
LL3_01401	SSF54001	Cysteine proteinases
LL3_01402	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01403	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
LL3_01404	SSF55909	Pentein
LL3_01406	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
LL3_01407	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01408	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_01409	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_01410	SSF53328	Formyltransferase
LL3_01410	SSF55021	ACT-like
LL3_01411	SSF53633	Carbamate kinase-like
LL3_01411	SSF88697	PUA domain-like
LL3_01412	SSF53720	ALDH-like
LL3_01413	SSF82784	OsmC-like
LL3_01414	SSF46785	"Winged helix" DNA-binding domain
LL3_01415	SSF82784	OsmC-like
LL3_01418	SSF48452	TPR-like
LL3_01418	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_01421	SSF103473	MFS general substrate transporter
LL3_01422	SSF46785	"Winged helix" DNA-binding domain
LL3_01422	SSF51206	cAMP-binding domain-like
LL3_01423	SSF51726	UROD/MetE-like
LL3_01424	SSF52743	Subtilisin-like
LL3_01425	SSF52091	SpoIIaa-like
LL3_01427	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01430	SSF51445	(Trans)glycosidases
LL3_01430	SSF54106	LysM domain
LL3_01432	SSF158791	MgtE N-terminal domain-like
LL3_01432	SSF161093	MgtE membrane domain-like
LL3_01432	SSF54631	CBS-domain pair
LL3_01433	SSF46955	Putative DNA-binding domain
LL3_01437	SSF46785	"Winged helix" DNA-binding domain
LL3_01440	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
LL3_01441	SSF100939	SPOC domain-like
LL3_01442	SSF141868	EAL domain-like
LL3_01442	SSF55073	Nucleotide cyclase
LL3_01442	SSF55785	PYP-like sensor domain (PAS domain)
LL3_01445	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_01454	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_01454	SSF55785	PYP-like sensor domain (PAS domain)
LL3_01454	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01455	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
LL3_01455	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
LL3_01457	SSF100950	NagB/RpiA/CoA transferase-like
LL3_01458	SSF56112	Protein kinase-like (PK-like)
LL3_01459	SSF56317	Carbon-nitrogen hydrolase
LL3_01460	SSF53383	PLP-dependent transferases
LL3_01461	SSF51649	RuBisCo, C-terminal domain
LL3_01461	SSF54966	RuBisCO, large subunit, small (N-terminal) domain
LL3_01462	SSF56784	HAD-like
LL3_01463	SSF53639	AraD/HMP-PK domain-like
LL3_01464	SSF51182	RmlC-like cupins
LL3_01465	SSF140500	BAS1536-like
LL3_01466	SSF103190	Sensory domain-like
LL3_01466	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_01466	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01468	SSF46785	"Winged helix" DNA-binding domain
LL3_01469	SSF103088	OmpA-like
LL3_01472	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01476	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_01477	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
LL3_01478	SSF102114	Radical SAM enzymes
LL3_01479	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
LL3_01482	SSF159173	YkvR-like
LL3_01487	SSF52833	Thioredoxin-like
LL3_01488	SSF56784	HAD-like
LL3_01488	SSF81653	Calcium ATPase, transduction domain A
LL3_01488	SSF81665	Calcium ATPase, transmembrane domain M
LL3_01489	SSF53092	Creatinase/prolidase N-terminal domain
LL3_01489	SSF55920	Creatinase/aminopeptidase
LL3_01491	SSF47413	lambda repressor-like DNA-binding domains
LL3_01491	SSF53822	Periplasmic binding protein-like I
LL3_01492	SSF50151	SacY-like RNA-binding domain
LL3_01492	SSF63520	PTS-regulatory domain, PRD
LL3_01493	SSF51261	Duplicated hybrid motif
LL3_01493	SSF55604	Glucose permease domain IIB
LL3_01494	SSF55594	HPr-like
LL3_01495	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
LL3_01495	SSF51621	Phosphoenolpyruvate/pyruvate domain
LL3_01495	SSF52009	Phosphohistidine domain
LL3_01497	SSF102114	Radical SAM enzymes
LL3_01498	SSF103190	Sensory domain-like
LL3_01498	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_01499	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_01499	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01500	SSF55797	PR-1-like
LL3_01501	SSF56519	Penicillin binding protein dimerisation domain
LL3_01501	SSF56601	beta-lactamase/transpeptidase-like
LL3_01502	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_01502	SSF55785	PYP-like sensor domain (PAS domain)
LL3_01502	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01503	SSF53383	PLP-dependent transferases
LL3_01506	SSF50341	CheW-like
LL3_01506	SSF52172	CheY-like
LL3_01508	SSF103473	MFS general substrate transporter
LL3_01509	SSF141523	L,D-transpeptidase catalytic domain-like
LL3_01509	SSF54106	LysM domain
LL3_01510	SSF56300	Metallo-dependent phosphatases
LL3_01511	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01513	SSF103190	Sensory domain-like
LL3_01513	SSF141868	EAL domain-like
LL3_01514	SSF143567	YkuJ-like
LL3_01517	SSF54631	CBS-domain pair
LL3_01518	SSF46785	"Winged helix" DNA-binding domain
LL3_01518	SSF53850	Periplasmic binding protein-like II
LL3_01519	SSF52218	Flavoproteins
LL3_01520	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
LL3_01521	SSF52218	Flavoproteins
LL3_01522	SSF51161	Trimeric LpxA-like enzymes
LL3_01523	SSF53187	Zn-dependent exopeptidases
LL3_01523	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_01525	SSF50182	Sm-like ribonucleoproteins
LL3_01525	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
LL3_01525	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
LL3_01527	SSF52833	Thioredoxin-like
LL3_01531	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_01532	SSF69572	Activating enzymes of the ubiquitin-like proteins
LL3_01533	SSF53218	Molybdenum cofactor biosynthesis proteins
LL3_01533	SSF63867	MoeA C-terminal domain-like
LL3_01533	SSF63882	MoeA N-terminal region -like
LL3_01534	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01535	SSF54690	Molybdopterin synthase subunit MoaE
LL3_01536	SSF54285	MoaD/ThiS
LL3_01540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01542	SSF100950	NagB/RpiA/CoA transferase-like
LL3_01542	SSF46785	"Winged helix" DNA-binding domain
LL3_01543	SSF53613	Ribokinase-like
LL3_01544	SSF52794	PTS system IIB component-like
LL3_01544	SSF55804	Phoshotransferase/anion transport protein
LL3_01545	SSF51306	LexA/Signal peptidase
LL3_01547	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01548	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_01548	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01549	SSF144052	Thermophilic metalloprotease-like
LL3_01551	SSF53067	Actin-like ATPase domain
LL3_01552	SSF89447	AbrB/MazE/MraZ-like
LL3_01553	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_01553	SSF55785	PYP-like sensor domain (PAS domain)
LL3_01553	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01554	SSF110857	Gamma-glutamyl cyclotransferase-like
LL3_01555	SSF116726	TrkA C-terminal domain-like
LL3_01555	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01556	SSF51338	Composite domain of metallo-dependent hydrolases
LL3_01556	SSF51556	Metallo-dependent hydrolases
LL3_01557	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_01560	SSF56784	HAD-like
LL3_01561	SSF56420	Peptide deformylase
LL3_01563	SSF140423	MW0975(SA0943)-like
LL3_01564	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_01565	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_01565	SSF52922	TK C-terminal domain-like
LL3_01566	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
LL3_01566	SSF51230	Single hybrid motif
LL3_01566	SSF52777	CoA-dependent acyltransferases
LL3_01567	SSF51905	FAD/NAD(P)-binding domain
LL3_01567	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
LL3_01569	SSF88713	Glycoside hydrolase/deacetylase
LL3_01571	SSF53383	PLP-dependent transferases
LL3_01571	SSF55904	Ornithine decarboxylase C-terminal domain
LL3_01573	SSF158504	BH2638-like
LL3_01574	SSF142913	YktB/PF0168-like
LL3_01576	SSF56655	Carbohydrate phosphatase
LL3_01577	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01578	SSF55486	Metalloproteases ("zincins"), catalytic domain
LL3_01583	SSF50447	Translation proteins
LL3_01583	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01583	SSF54980	EF-G C-terminal domain-like
LL3_01587	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01589	SSF56601	beta-lactamase/transpeptidase-like
LL3_01600	SSF47661	t-snare proteins
LL3_01606	SSF53474	alpha/beta-Hydrolases
LL3_01608	SSF48452	TPR-like
LL3_01611	SSF49265	Fibronectin type III
LL3_01613	SSF82771	GIY-YIG endonuclease
LL3_01614	SSF56349	DNA breaking-rejoining enzymes
LL3_01622	SSF54060	His-Me finger endonucleases
LL3_01623	SSF47413	lambda repressor-like DNA-binding domains
LL3_01637	SSF53041	Resolvase-like
LL3_01638	SSF56601	beta-lactamase/transpeptidase-like
LL3_01639	SSF140404	EF2458-like
LL3_01641	SSF51230	Single hybrid motif
LL3_01641	SSF51246	Rudiment single hybrid motif
LL3_01641	SSF51569	Aldolase
LL3_01641	SSF52440	PreATP-grasp domain
LL3_01641	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_01641	SSF89000	post-HMGL domain-like
LL3_01645	SSF46626	Cytochrome c
LL3_01645	SSF49503	Cupredoxins
LL3_01645	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
LL3_01646	SSF81442	Cytochrome c oxidase subunit I-like
LL3_01647	SSF81452	Cytochrome c oxidase subunit III-like
LL3_01650	SSF160755	YugN-like
LL3_01651	SSF54631	CBS-domain pair
LL3_01652	SSF55797	PR-1-like
LL3_01655	SSF158622	YheA/YmcA-like
LL3_01658	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_01659	SSF52374	Nucleotidylyl transferase
LL3_01661	SSF52151	FabD/lysophospholipase-like
LL3_01662	SSF50156	PDZ domain-like
LL3_01662	SSF54211	Ribosomal protein S5 domain 2-like
LL3_01663	SSF52374	Nucleotidylyl transferase
LL3_01665	SSF57829	Zn-binding ribosomal proteins
LL3_01666	SSF46689	Homeodomain-like
LL3_01667	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01668	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_01668	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01670	SSF89447	AbrB/MazE/MraZ-like
LL3_01671	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_01671	SSF81799	Putative methyltransferase TM0872, insert domain
LL3_01673	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
LL3_01673	SSF56519	Penicillin binding protein dimerisation domain
LL3_01673	SSF56601	beta-lactamase/transpeptidase-like
LL3_01674	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
LL3_01674	SSF56519	Penicillin binding protein dimerisation domain
LL3_01674	SSF56601	beta-lactamase/transpeptidase-like
LL3_01675	SSF53244	MurD-like peptide ligases, peptide-binding domain
LL3_01675	SSF53623	MurD-like peptide ligases, catalytic domain
LL3_01675	SSF63418	MurE/MurF N-terminal domain
LL3_01677	SSF51984	MurCD N-terminal domain
LL3_01677	SSF53244	MurD-like peptide ligases, peptide-binding domain
LL3_01677	SSF53623	MurD-like peptide ligases, catalytic domain
LL3_01679	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_01680	SSF56176	FAD-binding/transporter-associated domain-like
LL3_01680	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
LL3_01683	SSF53067	Actin-like ATPase domain
LL3_01684	SSF52490	Tubulin nucleotide-binding domain-like
LL3_01684	SSF55307	Tubulin C-terminal domain-like
LL3_01685	SSF49464	Carboxypeptidase regulatory domain-like
LL3_01685	SSF49899	Concanavalin A-like lectins/glucanases
LL3_01685	SSF52743	Subtilisin-like
LL3_01687	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_01687	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_01688	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_01688	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_01690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01692	SSF53187	Zn-dependent exopeptidases
LL3_01692	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_01693	SSF50346	PRC-barrel domain
LL3_01694	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
LL3_01695	SSF51419	PLP-binding barrel
LL3_01698	SSF55174	Alpha-L RNA-binding motif
LL3_01700	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
LL3_01700	SSF50677	ValRS/IleRS/LeuRS editing domain
LL3_01700	SSF52374	Nucleotidylyl transferase
LL3_01703	SSF55120	Pseudouridine synthase
LL3_01703	SSF55174	Alpha-L RNA-binding motif
LL3_01704	SSF53271	PRTase-like
LL3_01707	SSF53671	Aspartate/ornithine carbamoyltransferase
LL3_01708	SSF51338	Composite domain of metallo-dependent hydrolases
LL3_01708	SSF51556	Metallo-dependent hydrolases
LL3_01709	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
LL3_01709	SSF52317	Class I glutamine amidotransferase-like
LL3_01710	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
LL3_01710	SSF52335	Methylglyoxal synthase-like
LL3_01710	SSF52440	PreATP-grasp domain
LL3_01710	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_01711	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
LL3_01711	SSF63380	Riboflavin synthase domain-like
LL3_01712	SSF51395	FMN-linked oxidoreductases
LL3_01713	SSF51366	Ribulose-phoshate binding barrel
LL3_01714	SSF53271	PRTase-like
LL3_01716	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_01718	SSF52374	Nucleotidylyl transferase
LL3_01718	SSF88697	PUA domain-like
LL3_01719	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01720	SSF53790	Tetrapyrrole methylase
LL3_01721	SSF53800	Chelatase
LL3_01722	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01722	SSF75615	Siroheme synthase middle domains-like
LL3_01723	SSF51011	Glycosyl hydrolase domain
LL3_01723	SSF51445	(Trans)glycosidases
LL3_01725	SSF56784	HAD-like
LL3_01725	SSF81653	Calcium ATPase, transduction domain A
LL3_01725	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
LL3_01725	SSF81665	Calcium ATPase, transmembrane domain M
LL3_01728	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01729	SSF63562	RPB6/omega subunit-like
LL3_01730	SSF102645	CoaB-like
LL3_01730	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
LL3_01731	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01732	SSF56420	Peptide deformylase
LL3_01733	SSF50486	FMT C-terminal domain-like
LL3_01733	SSF53328	Formyltransferase
LL3_01734	SSF48013	NusB-like
LL3_01734	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_01735	SSF102114	Radical SAM enzymes
LL3_01736	SSF81606	PP2C-like
LL3_01737	SSF56112	Protein kinase-like (PK-like)
LL3_01738	SSF50249	Nucleic acid-binding proteins
LL3_01738	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01739	SSF51366	Ribulose-phoshate binding barrel
LL3_01740	SSF63862	Thiamin pyrophosphokinase, substrate-binding domain
LL3_01740	SSF63999	Thiamin pyrophosphokinase, catalytic domain
LL3_01742	SSF143800	L28p-like
LL3_01744	SSF101473	DhaL-like
LL3_01745	SSF143548	Serine metabolism enzymes domain
LL3_01745	SSF55021	ACT-like
LL3_01747	SSF50249	Nucleic acid-binding proteins
LL3_01747	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01748	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
LL3_01749	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
LL3_01750	SSF52151	FabD/lysophospholipase-like
LL3_01750	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
LL3_01751	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01752	SSF47336	ACP-like
LL3_01753	SSF54768	dsRNA-binding domain-like
LL3_01753	SSF69065	RNase III domain-like
LL3_01754	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01754	SSF57997	Tropomyosin
LL3_01754	SSF75553	Smc hinge domain
LL3_01755	SSF47364	Domain of the SRP/SRP receptor G-proteins
LL3_01755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01756	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_01757	SSF47446	Signal peptide-binding domain
LL3_01757	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01758	SSF54565	Ribosomal protein S16
LL3_01759	SSF54814	Prokaryotic type KH domain (KH-domain type II)
LL3_01761	SSF50346	PRC-barrel domain
LL3_01761	SSF50447	Translation proteins
LL3_01762	SSF75217	alpha/beta knot
LL3_01764	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01765	SSF53098	Ribonuclease H-like
LL3_01767	SSF160544	EscU C-terminal domain-like
LL3_01768	SSF52210	Succinyl-CoA synthetase domains
LL3_01768	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_01769	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01769	SSF52210	Succinyl-CoA synthetase domains
LL3_01770	SSF102405	MCP/YpsA-like
LL3_01771	SSF56712	Prokaryotic type I DNA topoisomerase
LL3_01771	SSF57783	Zinc beta-ribbon
LL3_01772	SSF51905	FAD/NAD(P)-binding domain
LL3_01773	SSF56349	DNA breaking-rejoining enzymes
LL3_01774	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_01775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01776	SSF46785	"Winged helix" DNA-binding domain
LL3_01781	SSF48029	FliG
LL3_01783	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01785	SSF158791	MgtE N-terminal domain-like
LL3_01788	SSF117143	Flagellar hook protein flgE
LL3_01791	SSF101801	Surface presentation of antigens (SPOA)
LL3_01791	SSF103039	CheC-like
LL3_01792	SSF101801	Surface presentation of antigens (SPOA)
LL3_01792	SSF103039	CheC-like
LL3_01793	SSF52172	CheY-like
LL3_01798	SSF160544	EscU C-terminal domain-like
LL3_01800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01801	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01802	SSF52172	CheY-like
LL3_01802	SSF52738	Methylesterase CheB, C-terminal domain
LL3_01803	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
LL3_01803	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_01803	SSF50341	CheW-like
LL3_01803	SSF55052	CheY-binding domain of CheA
LL3_01803	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01804	SSF50341	CheW-like
LL3_01805	SSF103039	CheC-like
LL3_01806	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
LL3_01807	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_01807	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_01809	SSF52313	Ribosomal protein S2
LL3_01810	SSF46934	UBA-like
LL3_01810	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
LL3_01811	SSF53633	Carbamate kinase-like
LL3_01812	SSF55194	Ribosome recycling factor, RRF
LL3_01813	SSF64005	Undecaprenyl diphosphate synthase
LL3_01815	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01815	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_01815	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
LL3_01816	SSF50156	PDZ domain-like
LL3_01817	SSF52954	Class II aaRS ABD-related
LL3_01817	SSF55681	Class II aaRS and biotin synthetases
LL3_01817	SSF55826	YbaK/ProRS associated domain
LL3_01818	SSF50249	Nucleic acid-binding proteins
LL3_01818	SSF53098	Ribonuclease H-like
LL3_01819	SSF74942	YhbC-like, C-terminal domain
LL3_01819	SSF75420	YhbC-like, N-terminal domain
LL3_01820	SSF50249	Nucleic acid-binding proteins
LL3_01820	SSF54814	Prokaryotic type KH domain (KH-domain type II)
LL3_01820	SSF69705	Transcription factor NusA, N-terminal domain
LL3_01821	SSF64376	YlxR-like
LL3_01822	SSF55315	L30e-like
LL3_01823	SSF50447	Translation proteins
LL3_01823	SSF52156	Initiation factor IF2/eIF5b, domain 3
LL3_01823	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01824	SSF103007	Hypothetical protein TT1725
LL3_01825	SSF89919	Ribosome-binding factor A, RbfA
LL3_01826	SSF55120	Pseudouridine synthase
LL3_01827	SSF52374	Nucleotidylyl transferase
LL3_01827	SSF82114	Riboflavin kinase-like
LL3_01828	SSF50249	Nucleic acid-binding proteins
LL3_01828	SSF54211	Ribosomal protein S5 domain 2-like
LL3_01828	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
LL3_01828	SSF55666	Ribonuclease PH domain 2-like
LL3_01829	SSF88713	Glycoside hydrolase/deacetylase
LL3_01830	SSF63411	LuxS/MPP-like metallohydrolase
LL3_01831	SSF50346	PRC-barrel domain
LL3_01832	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01833	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
LL3_01834	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01834	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_01835	SSF53633	Carbamate kinase-like
LL3_01835	SSF55021	ACT-like
LL3_01836	SSF51569	Aldolase
LL3_01837	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_01838	SSF52096	ClpP/crotonase
LL3_01840	SSF46785	"Winged helix" DNA-binding domain
LL3_01840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01841	SSF46785	"Winged helix" DNA-binding domain
LL3_01841	SSF64288	Chorismate lyase-like
LL3_01842	SSF103473	MFS general substrate transporter
LL3_01843	SSF46785	"Winged helix" DNA-binding domain
LL3_01844	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_01844	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
LL3_01845	SSF63411	LuxS/MPP-like metallohydrolase
LL3_01846	SSF63411	LuxS/MPP-like metallohydrolase
LL3_01847	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01849	SSF55021	ACT-like
LL3_01850	SSF47413	lambda repressor-like DNA-binding domains
LL3_01852	SSF142433	CinA-like
LL3_01852	SSF53218	Molybdenum cofactor biosynthesis proteins
LL3_01853	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01853	SSF54752	RecA protein, C-terminal domain
LL3_01854	SSF56601	beta-lactamase/transpeptidase-like
LL3_01855	SSF109604	HD-domain/PDEase-like
LL3_01855	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
LL3_01856	SSF56300	Metallo-dependent phosphatases
LL3_01858	SSF50129	GroES-like
LL3_01858	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01859	SSF53383	PLP-dependent transferases
LL3_01860	SSF102114	Radical SAM enzymes
LL3_01861	SSF158622	YheA/YmcA-like
LL3_01863	SSF48334	DNA repair protein MutS, domain III
LL3_01863	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01863	SSF53150	DNA repair protein MutS, domain II
LL3_01863	SSF55271	DNA repair protein MutS, domain I
LL3_01864	SSF118116	DNA mismatch repair protein MutL
LL3_01864	SSF54211	Ribosomal protein S5 domain 2-like
LL3_01864	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01865	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_01866	SSF52151	FabD/lysophospholipase-like
LL3_01866	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
LL3_01867	SSF52151	FabD/lysophospholipase-like
LL3_01867	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
LL3_01868	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
LL3_01868	SSF52151	FabD/lysophospholipase-like
LL3_01868	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
LL3_01869	SSF47336	ACP-like
LL3_01870	SSF53901	Thiolase-like
LL3_01871	SSF52096	ClpP/crotonase
LL3_01872	SSF52096	ClpP/crotonase
LL3_01873	SSF47336	ACP-like
LL3_01873	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01873	SSF52777	CoA-dependent acyltransferases
LL3_01873	SSF53901	Thiolase-like
LL3_01873	SSF56801	Acetyl-CoA synthetase-like
LL3_01874	SSF47336	ACP-like
LL3_01874	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01874	SSF53901	Thiolase-like
LL3_01875	SSF47336	ACP-like
LL3_01875	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01875	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_01875	SSF53901	Thiolase-like
LL3_01876	SSF47336	ACP-like
LL3_01876	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01876	SSF52777	CoA-dependent acyltransferases
LL3_01876	SSF53901	Thiolase-like
LL3_01876	SSF56801	Acetyl-CoA synthetase-like
LL3_01877	SSF47336	ACP-like
LL3_01877	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_01877	SSF53474	alpha/beta-Hydrolases
LL3_01877	SSF53901	Thiolase-like
LL3_01878	SSF48264	Cytochrome P450
LL3_01883	SSF52743	Subtilisin-like
LL3_01888	SSF82784	OsmC-like
LL3_01889	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_01890	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_01893	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01894	SSF50182	Sm-like ribonucleoproteins
LL3_01897	SSF52218	Flavoproteins
LL3_01898	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
LL3_01898	SSF51998	PFL-like glycyl radical enzymes
LL3_01899	SSF47240	Ferritin-like
LL3_01900	SSF55811	Nudix
LL3_01903	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01904	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_01905	SSF53383	PLP-dependent transferases
LL3_01906	SSF46955	Putative DNA-binding domain
LL3_01907	SSF54368	Glutamine synthetase, N-terminal domain
LL3_01907	SSF55931	Glutamine synthetase/guanido kinase
LL3_01914	SSF48264	Cytochrome P450
LL3_01916	SSF103473	MFS general substrate transporter
LL3_01917	SSF49899	Concanavalin A-like lectins/glucanases
LL3_01917	SSF75005	Arabinanase/levansucrase/invertase
LL3_01918	SSF46785	"Winged helix" DNA-binding domain
LL3_01918	SSF53067	Actin-like ATPase domain
LL3_01919	SSF51658	Xylose isomerase-like
LL3_01920	SSF53067	Actin-like ATPase domain
LL3_01921	SSF49899	Concanavalin A-like lectins/glucanases
LL3_01922	SSF52009	Phosphohistidine domain
LL3_01922	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_01923	SSF46689	Homeodomain-like
LL3_01924	SSF50129	GroES-like
LL3_01924	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01926	SSF48452	TPR-like
LL3_01929	SSF109854	DinB/YfiT-like putative metalloenzymes
LL3_01930	SSF50129	GroES-like
LL3_01930	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01935	SSF52833	Thioredoxin-like
LL3_01935	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01936	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_01941	SSF51679	Bacterial luciferase-like
LL3_01943	SSF81296	E set domains
LL3_01948	SSF51126	Pectin lyase-like
LL3_01950	SSF51283	dUTPase-like
LL3_01954	SSF117892	Band 7/SPFH domain
LL3_01957	SSF46785	"Winged helix" DNA-binding domain
LL3_01957	SSF51306	LexA/Signal peptidase
LL3_01959	SSF53041	Resolvase-like
LL3_01960	SSF158221	YnzC-like
LL3_01961	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_01961	SSF52922	TK C-terminal domain-like
LL3_01964	SSF140500	BAS1536-like
LL3_01966	SSF52172	CheY-like
LL3_01972	SSF52016	LeuD/IlvD-like
LL3_01972	SSF53732	Aconitase iron-sulfur domain
LL3_01973	SSF52833	Thioredoxin-like
LL3_01977	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
LL3_01979	SSF89360	HesB-like domain
LL3_01981	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_01982	SSF54211	Ribosomal protein S5 domain 2-like
LL3_01982	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01982	SSF56719	Type II DNA topoisomerase
LL3_01983	SSF101904	GyrA/ParC C-terminal domain-like
LL3_01983	SSF56719	Type II DNA topoisomerase
LL3_01995	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_01995	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_01996	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_01996	SSF52172	CheY-like
LL3_01997	SSF51011	Glycosyl hydrolase domain
LL3_01997	SSF51445	(Trans)glycosidases
LL3_01998	SSF49785	Galactose-binding domain-like
LL3_01998	SSF75005	Arabinanase/levansucrase/invertase
LL3_02000	SSF47336	ACP-like
LL3_02000	SSF52777	CoA-dependent acyltransferases
LL3_02000	SSF53474	alpha/beta-Hydrolases
LL3_02000	SSF56801	Acetyl-CoA synthetase-like
LL3_02001	SSF47336	ACP-like
LL3_02001	SSF52777	CoA-dependent acyltransferases
LL3_02001	SSF56801	Acetyl-CoA synthetase-like
LL3_02002	SSF47336	ACP-like
LL3_02002	SSF52777	CoA-dependent acyltransferases
LL3_02002	SSF53383	PLP-dependent transferases
LL3_02002	SSF53901	Thiolase-like
LL3_02002	SSF56801	Acetyl-CoA synthetase-like
LL3_02003	SSF52151	FabD/lysophospholipase-like
LL3_02003	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
LL3_02006	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02007	SSF100950	NagB/RpiA/CoA transferase-like
LL3_02008	SSF100950	NagB/RpiA/CoA transferase-like
LL3_02009	SSF48264	Cytochrome P450
LL3_02010	SSF102114	Radical SAM enzymes
LL3_02011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02012	SSF53383	PLP-dependent transferases
LL3_02013	SSF53383	PLP-dependent transferases
LL3_02016	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_02018	SSF52096	ClpP/crotonase
LL3_02019	SSF52096	ClpP/crotonase
LL3_02020	SSF51569	Aldolase
LL3_02021	SSF51230	Single hybrid motif
LL3_02022	SSF51246	Rudiment single hybrid motif
LL3_02022	SSF52440	PreATP-grasp domain
LL3_02022	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_02023	SSF56801	Acetyl-CoA synthetase-like
LL3_02024	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
LL3_02024	SSF56645	Acyl-CoA dehydrogenase NM domain-like
LL3_02025	SSF51445	(Trans)glycosidases
LL3_02027	SSF47336	ACP-like
LL3_02027	SSF52777	CoA-dependent acyltransferases
LL3_02027	SSF53474	alpha/beta-Hydrolases
LL3_02027	SSF56801	Acetyl-CoA synthetase-like
LL3_02028	SSF47336	ACP-like
LL3_02028	SSF52777	CoA-dependent acyltransferases
LL3_02028	SSF56801	Acetyl-CoA synthetase-like
LL3_02030	SSF56601	beta-lactamase/transpeptidase-like
LL3_02031	SSF74650	Galactose mutarotase-like
LL3_02035	SSF56349	DNA breaking-rejoining enzymes
LL3_02037	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_02038	SSF103473	MFS general substrate transporter
LL3_02039	SSF46785	"Winged helix" DNA-binding domain
LL3_02043	SSF46548	alpha-helical ferredoxin
LL3_02043	SSF51971	Nucleotide-binding domain
LL3_02044	SSF51395	FMN-linked oxidoreductases
LL3_02044	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_02044	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
LL3_02045	SSF46785	"Winged helix" DNA-binding domain
LL3_02045	SSF53850	Periplasmic binding protein-like II
LL3_02046	SSF53633	Carbamate kinase-like
LL3_02046	SSF88697	PUA domain-like
LL3_02047	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_02047	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02048	SSF46785	"Winged helix" DNA-binding domain
LL3_02049	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02052	SSF56024	Phospholipase D/nuclease
LL3_02056	SSF53901	Thiolase-like
LL3_02062	SSF53041	Resolvase-like
LL3_02064	SSF103473	MFS general substrate transporter
LL3_02065	SSF53067	Actin-like ATPase domain
LL3_02066	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02066	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
LL3_02070	SSF46785	"Winged helix" DNA-binding domain
LL3_02072	SSF159121	BC4932-like
LL3_02073	SSF50249	Nucleic acid-binding proteins
LL3_02074	SSF46689	Homeodomain-like
LL3_02074	SSF51182	RmlC-like cupins
LL3_02075	SSF46689	Homeodomain-like
LL3_02075	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_02076	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_02079	SSF46785	"Winged helix" DNA-binding domain
LL3_02080	SSF53955	Lysozyme-like
LL3_02084	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_02085	SSF141986	LD-carboxypeptidase A C-terminal domain-like
LL3_02085	SSF52317	Class I glutamine amidotransferase-like
LL3_02088	SSF50685	Barwin-like endoglucanases
LL3_02088	SSF54106	LysM domain
LL3_02090	SSF46785	"Winged helix" DNA-binding domain
LL3_02090	SSF47819	HRDC-like
LL3_02090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02092	SSF52218	Flavoproteins
LL3_02093	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
LL3_02093	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
LL3_02096	SSF49764	HSP20-like chaperones
LL3_02099	SSF50729	PH domain-like
LL3_02102	SSF53720	ALDH-like
LL3_02103	SSF48239	Terpenoid cyclases/Protein prenyltransferases
LL3_02104	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
LL3_02104	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
LL3_02105	SSF161070	SNF-like
LL3_02107	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_02108	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
LL3_02108	SSF51230	Single hybrid motif
LL3_02108	SSF52777	CoA-dependent acyltransferases
LL3_02109	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_02110	SSF53300	vWA-like
LL3_02111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02112	SSF49329	Cu,Zn superoxide dismutase-like
LL3_02113	SSF54001	Cysteine proteinases
LL3_02113	SSF54106	LysM domain
LL3_02115	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_02116	SSF143597	YojJ-like
LL3_02119	SSF52091	SpoIIaa-like
LL3_02120	SSF102588	LmbE-like
LL3_02121	SSF89442	Hypothetical protein YojF
LL3_02123	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_02124	SSF49764	HSP20-like chaperones
LL3_02126	SSF55331	Tautomerase/MIF
LL3_02128	SSF46785	"Winged helix" DNA-binding domain
LL3_02129	SSF55469	FMN-dependent nitroreductase-like
LL3_02130	SSF53474	alpha/beta-Hydrolases
LL3_02131	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_02134	SSF51445	(Trans)glycosidases
LL3_02135	SSF51445	(Trans)glycosidases
LL3_02136	SSF46785	"Winged helix" DNA-binding domain
LL3_02136	SSF64288	Chorismate lyase-like
LL3_02137	SSF47090	PGBD-like
LL3_02137	SSF50156	PDZ domain-like
LL3_02137	SSF52096	ClpP/crotonase
LL3_02138	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02140	SSF55166	Hedgehog/DD-peptidase
LL3_02141	SSF53167	Purine and uridine phosphorylases
LL3_02144	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
LL3_02148	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_02149	SSF140652	YozE-like
LL3_02151	SSF102114	Radical SAM enzymes
LL3_02152	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_02153	SSF53187	Zn-dependent exopeptidases
LL3_02153	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_02154	SSF100950	NagB/RpiA/CoA transferase-like
LL3_02155	SSF100950	NagB/RpiA/CoA transferase-like
LL3_02156	SSF53383	PLP-dependent transferases
LL3_02158	SSF55136	Probable bacterial effector-binding domain
LL3_02161	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_02162	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_02165	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_02166	SSF50956	Thermostable phytase (3-phytase)
LL3_02167	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02170	SSF51395	FMN-linked oxidoreductases
LL3_02173	SSF53041	Resolvase-like
LL3_02174	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02175	SSF51316	Mss4-like
LL3_02176	SSF55068	Peptide methionine sulfoxide reductase
LL3_02177	SSF46785	"Winged helix" DNA-binding domain
LL3_02179	SSF52266	SGNH hydrolase
LL3_02180	SSF52833	Thioredoxin-like
LL3_02182	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
LL3_02183	SSF46785	"Winged helix" DNA-binding domain
LL3_02183	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02185	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
LL3_02186	SSF53597	Dihydrofolate reductase-like
LL3_02187	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
LL3_02189	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02191	SSF143975	IlvD/EDD N-terminal domain-like
LL3_02191	SSF52016	LeuD/IlvD-like
LL3_02192	SSF110836	Hypothetical protein SAV1430
LL3_02192	SSF48371	ARM repeat
LL3_02193	SSF109604	HD-domain/PDEase-like
LL3_02194	SSF52833	Thioredoxin-like
LL3_02196	SSF52317	Class I glutamine amidotransferase-like
LL3_02197	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_02198	SSF50249	Nucleic acid-binding proteins
LL3_02202	SSF53098	Ribonuclease H-like
LL3_02204	SSF53098	Ribonuclease H-like
LL3_02206	SSF47807	5' to 3' exonuclease, C-terminal subdomain
LL3_02206	SSF88723	PIN domain-like
LL3_02209	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02213	SSF53901	Thiolase-like
LL3_02215	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_02216	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
LL3_02220	SSF52980	Restriction endonuclease-like
LL3_02225	SSF56300	Metallo-dependent phosphatases
LL3_02232	SSF53597	Dihydrofolate reductase-like
LL3_02233	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
LL3_02239	SSF51283	dUTPase-like
LL3_02241	SSF52833	Thioredoxin-like
LL3_02243	SSF47240	Ferritin-like
LL3_02245	SSF64496	DNA-binding domain of intron-encoded endonucleases
LL3_02245	SSF82771	GIY-YIG endonuclease
LL3_02246	SSF54060	His-Me finger endonucleases
LL3_02247	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
LL3_02247	SSF51998	PFL-like glycyl radical enzymes
LL3_02261	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02262	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02263	SSF56784	HAD-like
LL3_02264	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02266	SSF159038	YorP-like
LL3_02267	SSF50685	Barwin-like endoglucanases
LL3_02268	SSF89550	PHP domain-like
LL3_02269	SSF64182	DHH phosphoesterases
LL3_02270	SSF56731	DNA primase core
LL3_02270	SSF57783	Zinc beta-ribbon
LL3_02271	SSF48024	N-terminal domain of DnaB helicase
LL3_02271	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02277	SSF51126	Pectin lyase-like
LL3_02281	SSF159006	YopX-like
LL3_02284	SSF143081	BB1717-like
LL3_02285	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
LL3_02301	SSF159006	YopX-like
LL3_02306	SSF47413	lambda repressor-like DNA-binding domains
LL3_02307	SSF56349	DNA breaking-rejoining enzymes
LL3_02309	SSF56349	DNA breaking-rejoining enzymes
LL3_02315	SSF81901	HCP-like
LL3_02319	SSF47413	lambda repressor-like DNA-binding domains
LL3_02325	SSF47413	lambda repressor-like DNA-binding domains
LL3_02330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02337	SSF52490	Tubulin nucleotide-binding domain-like
LL3_02340	SSF47729	IHF-like DNA-binding proteins
LL3_02341	SSF160570	YonK-like
LL3_02345	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02362	SSF51695	PLC-like phosphodiesterases
LL3_02365	SSF56349	DNA breaking-rejoining enzymes
LL3_02375	SSF51126	Pectin lyase-like
LL3_02376	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
LL3_02380	SSF48452	TPR-like
LL3_02381	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
LL3_02382	SSF56672	DNA/RNA polymerases
LL3_02383	SSF56672	DNA/RNA polymerases
LL3_02388	SSF160631	SMI1/KNR4-like
LL3_02390	SSF50199	Staphylococcal nuclease
LL3_02391	SSF53041	Resolvase-like
LL3_02393	SSF53271	PRTase-like
LL3_02394	SSF55486	Metalloproteases ("zincins"), catalytic domain
LL3_02395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02399	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02401	SSF102405	MCP/YpsA-like
LL3_02402	SSF53098	Ribonuclease H-like
LL3_02403	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02404	SSF51261	Duplicated hybrid motif
LL3_02405	SSF49764	HSP20-like chaperones
LL3_02408	SSF140415	YppE-like
LL3_02412	SSF52980	Restriction endonuclease-like
LL3_02413	SSF49265	Fibronectin type III
LL3_02413	SSF53955	Lysozyme-like
LL3_02413	SSF56601	beta-lactamase/transpeptidase-like
LL3_02415	SSF48150	DNA-glycosylase
LL3_02416	SSF158499	DnaD domain-like
LL3_02417	SSF50249	Nucleic acid-binding proteins
LL3_02417	SSF55681	Class II aaRS and biotin synthetases
LL3_02418	SSF53383	PLP-dependent transferases
LL3_02419	SSF54403	Cystatin/monellin
LL3_02422	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02422	SSF53098	Ribonuclease H-like
LL3_02424	SSF50692	ADC-like
LL3_02425	SSF52374	Nucleotidylyl transferase
LL3_02426	SSF51621	Phosphoenolpyruvate/pyruvate domain
LL3_02427	SSF46785	"Winged helix" DNA-binding domain
LL3_02427	SSF50037	C-terminal domain of transcriptional repressors
LL3_02427	SSF55681	Class II aaRS and biotin synthetases
LL3_02428	SSF81301	Nucleotidyltransferase
LL3_02428	SSF81891	Poly A polymerase C-terminal region-like
LL3_02429	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_02430	SSF102588	LmbE-like
LL3_02431	SSF52335	Methylglyoxal synthase-like
LL3_02432	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02432	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_02433	SSF101386	all-alpha NTP pyrophosphatases
LL3_02435	SSF51182	RmlC-like cupins
LL3_02438	SSF46626	Cytochrome c
LL3_02438	SSF81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
LL3_02439	SSF81342	Transmembrane di-heme cytochromes
LL3_02440	SSF50022	ISP domain
LL3_02443	SSF48452	TPR-like
LL3_02445	SSF55205	EPT/RTPC-like
LL3_02446	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_02446	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02446	SSF55021	ACT-like
LL3_02447	SSF53383	PLP-dependent transferases
LL3_02448	SSF51366	Ribulose-phoshate binding barrel
LL3_02449	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
LL3_02450	SSF51366	Ribulose-phoshate binding barrel
LL3_02451	SSF51366	Ribulose-phoshate binding barrel
LL3_02452	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
LL3_02452	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
LL3_02453	SSF56322	ADC synthase
LL3_02454	SSF55298	YjgF-like
LL3_02455	SSF56796	Dehydroquinate synthase-like
LL3_02456	SSF103263	Chorismate synthase, AroC
LL3_02457	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
LL3_02457	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02458	SSF54919	Nucleoside diphosphate kinase, NDK
LL3_02459	SSF48576	Terpenoid synthases
LL3_02460	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02462	SSF51219	TRAP-like
LL3_02463	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
LL3_02464	SSF47729	IHF-like DNA-binding proteins
LL3_02465	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02468	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_02468	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02469	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02471	SSF51395	FMN-linked oxidoreductases
LL3_02472	SSF50249	Nucleic acid-binding proteins
LL3_02473	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02475	SSF141371	PilZ domain-like
LL3_02477	SSF47090	PGBD-like
LL3_02479	SSF51905	FAD/NAD(P)-binding domain
LL3_02480	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02480	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_02482	SSF56300	Metallo-dependent phosphatases
LL3_02484	SSF54106	LysM domain
LL3_02486	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02488	SSF54862	4Fe-4S ferredoxins
LL3_02492	SSF143548	Serine metabolism enzymes domain
LL3_02492	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02492	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
LL3_02492	SSF55021	ACT-like
LL3_02494	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_02494	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_02495	SSF158472	HAMP domain-like
LL3_02495	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_02495	SSF55785	PYP-like sensor domain (PAS domain)
LL3_02495	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_02496	SSF52172	CheY-like
LL3_02499	SSF52833	Thioredoxin-like
LL3_02500	SSF55120	Pseudouridine synthase
LL3_02500	SSF55174	Alpha-L RNA-binding motif
LL3_02503	SSF56601	beta-lactamase/transpeptidase-like
LL3_02505	SSF46785	"Winged helix" DNA-binding domain
LL3_02507	SSF140663	TTHA0068-like
LL3_02508	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_02509	SSF52121	Lumazine synthase
LL3_02510	SSF142695	RibA-like
LL3_02510	SSF55821	YrdC/RibB
LL3_02511	SSF63380	Riboflavin synthase domain-like
LL3_02512	SSF53597	Dihydrofolate reductase-like
LL3_02512	SSF53927	Cytidine deaminase-like
LL3_02515	SSF51306	LexA/Signal peptidase
LL3_02518	SSF50891	Cyclophilin-like
LL3_02521	SSF50621	Alanine racemase C-terminal domain-like
LL3_02521	SSF51419	PLP-binding barrel
LL3_02525	SSF53901	Thiolase-like
LL3_02529	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_02529	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_02530	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_02531	SSF52091	SpoIIaa-like
LL3_02532	SSF56601	beta-lactamase/transpeptidase-like
LL3_02532	SSF69189	Penicillin-binding protein associated domain
LL3_02533	SSF53167	Purine and uridine phosphorylases
LL3_02534	SSF143856	DeoB insert domain-like
LL3_02534	SSF53649	Alkaline phosphatase-like
LL3_02535	SSF47823	lambda integrase-like, N-terminal domain
LL3_02535	SSF56349	DNA breaking-rejoining enzymes
LL3_02537	SSF46785	"Winged helix" DNA-binding domain
LL3_02541	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02541	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_02543	SSF48557	L-aspartase-like
LL3_02544	SSF53774	Glutaminase/Asparaginase
LL3_02545	SSF47413	lambda repressor-like DNA-binding domains
LL3_02546	SSF47781	RuvA domain 2-like
LL3_02546	SSF89550	PHP domain-like
LL3_02547	SSF55811	Nudix
LL3_02549	SSF51430	NAD(P)-linked oxidoreductase
LL3_02551	SSF53474	alpha/beta-Hydrolases
LL3_02553	SSF89360	HesB-like domain
LL3_02554	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_02554	SSF81301	Nucleotidyltransferase
LL3_02556	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_02557	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
LL3_02557	SSF56672	DNA/RNA polymerases
LL3_02562	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02563	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
LL3_02564	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02565	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_02566	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_02566	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02568	SSF46785	"Winged helix" DNA-binding domain
LL3_02568	SSF53850	Periplasmic binding protein-like II
LL3_02570	SSF51395	FMN-linked oxidoreductases
LL3_02571	SSF53474	alpha/beta-Hydrolases
LL3_02572	SSF57829	Zn-binding ribosomal proteins
LL3_02573	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_02574	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02574	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_02575	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_02575	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02576	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
LL3_02576	SSF56672	DNA/RNA polymerases
LL3_02579	SSF53187	Zn-dependent exopeptidases
LL3_02579	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_02580	SSF52096	ClpP/crotonase
LL3_02581	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_02582	SSF141523	L,D-transpeptidase catalytic domain-like
LL3_02584	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02585	SSF161098	MetI-like
LL3_02586	SSF53850	Periplasmic binding protein-like II
LL3_02588	SSF111331	NAD kinase/diacylglycerol kinase-like
LL3_02589	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
LL3_02589	SSF51230	Single hybrid motif
LL3_02589	SSF52777	CoA-dependent acyltransferases
LL3_02590	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_02590	SSF52922	TK C-terminal domain-like
LL3_02591	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_02592	SSF51905	FAD/NAD(P)-binding domain
LL3_02592	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
LL3_02593	SSF53067	Actin-like ATPase domain
LL3_02594	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02594	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_02595	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
LL3_02596	SSF46689	Homeodomain-like
LL3_02596	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02596	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02596	SSF55785	PYP-like sensor domain (PAS domain)
LL3_02598	SSF51621	Phosphoenolpyruvate/pyruvate domain
LL3_02599	SSF103378	2-methylcitrate dehydratase PrpD
LL3_02600	SSF48256	Citrate synthase
LL3_02601	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
LL3_02601	SSF56645	Acyl-CoA dehydrogenase NM domain-like
LL3_02602	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_02602	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02603	SSF53901	Thiolase-like
LL3_02604	SSF51695	PLC-like phosphodiesterases
LL3_02605	SSF53187	Zn-dependent exopeptidases
LL3_02609	SSF47413	lambda repressor-like DNA-binding domains
LL3_02612	SSF51395	FMN-linked oxidoreductases
LL3_02615	SSF50621	Alanine racemase C-terminal domain-like
LL3_02615	SSF51419	PLP-binding barrel
LL3_02617	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_02617	SSF52172	CheY-like
LL3_02618	SSF50156	PDZ domain-like
LL3_02618	SSF50494	Trypsin-like serine proteases
LL3_02619	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02620	SSF46785	"Winged helix" DNA-binding domain
LL3_02620	SSF55252	C-terminal domain of arginine repressor
LL3_02621	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02621	SSF55174	Alpha-L RNA-binding motif
LL3_02622	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_02622	SSF52922	TK C-terminal domain-like
LL3_02623	SSF48576	Terpenoid synthases
LL3_02624	SSF116842	XseB-like
LL3_02626	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02626	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_02627	SSF48013	NusB-like
LL3_02630	SSF51246	Rudiment single hybrid motif
LL3_02630	SSF52440	PreATP-grasp domain
LL3_02630	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_02631	SSF51230	Single hybrid motif
LL3_02639	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02641	SSF50104	Translation proteins SH3-like domain
LL3_02641	SSF50249	Nucleic acid-binding proteins
LL3_02642	SSF55920	Creatinase/aminopeptidase
LL3_02646	SSF52151	FabD/lysophospholipase-like
LL3_02647	SSF46785	"Winged helix" DNA-binding domain
LL3_02647	SSF47979	Iron-dependent repressor protein, dimerization domain
LL3_02648	SSF55681	Class II aaRS and biotin synthetases
LL3_02650	SSF52821	Rhodanese/Cell cycle control phosphatase
LL3_02651	SSF53383	PLP-dependent transferases
LL3_02652	SSF53383	PLP-dependent transferases
LL3_02653	SSF101790	Aminomethyltransferase beta-barrel domain
LL3_02653	SSF103025	Folate-binding domain
LL3_02654	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02657	SSF47406	SinR repressor dimerisation domain-like
LL3_02658	SSF47406	SinR repressor dimerisation domain-like
LL3_02658	SSF47413	lambda repressor-like DNA-binding domains
LL3_02660	SSF51306	LexA/Signal peptidase
LL3_02667	SSF54523	Pili subunits
LL3_02668	SSF54523	Pili subunits
LL3_02670	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02672	SSF143865	CorA soluble domain-like
LL3_02672	SSF144083	Magnesium transport protein CorA, transmembrane region
LL3_02673	SSF54631	CBS-domain pair
LL3_02673	SSF56176	FAD-binding/transporter-associated domain-like
LL3_02674	SSF52091	SpoIIaa-like
LL3_02675	SSF52833	Thioredoxin-like
LL3_02677	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_02679	SSF89957	MTH1187/YkoF-like
LL3_02680	SSF82171	DPP6 N-terminal domain-like
LL3_02681	SSF53187	Zn-dependent exopeptidases
LL3_02682	SSF53067	Actin-like ATPase domain
LL3_02683	SSF158379	YqgQ-like
LL3_02686	SSF100950	NagB/RpiA/CoA transferase-like
LL3_02691	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02692	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02693	SSF161098	MetI-like
LL3_02694	SSF161098	MetI-like
LL3_02695	SSF53850	Periplasmic binding protein-like II
LL3_02696	SSF56519	Penicillin binding protein dimerisation domain
LL3_02696	SSF56601	beta-lactamase/transpeptidase-like
LL3_02697	SSF103473	MFS general substrate transporter
LL3_02698	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
LL3_02698	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
LL3_02702	SSF51717	Dihydropteroate synthetase-like
LL3_02702	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
LL3_02704	SSF56784	HAD-like
LL3_02705	SSF46785	"Winged helix" DNA-binding domain
LL3_02708	SSF51658	Xylose isomerase-like
LL3_02709	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02712	SSF102705	NIF3 (NGG1p interacting factor 3)-like
LL3_02713	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02714	SSF46626	Cytochrome c
LL3_02715	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_02715	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_02716	SSF48024	N-terminal domain of DnaB helicase
LL3_02716	SSF56731	DNA primase core
LL3_02716	SSF57783	Zinc beta-ribbon
LL3_02719	SSF46785	"Winged helix" DNA-binding domain
LL3_02719	SSF54631	CBS-domain pair
LL3_02720	SSF109604	HD-domain/PDEase-like
LL3_02721	SSF55681	Class II aaRS and biotin synthetases
LL3_02722	SSF50249	Nucleic acid-binding proteins
LL3_02722	SSF57863	ArfGap/RecO-like zinc finger
LL3_02724	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02724	SSF54814	Prokaryotic type KH domain (KH-domain type II)
LL3_02725	SSF53927	Cytidine deaminase-like
LL3_02727	SSF55486	Metalloproteases ("zincins"), catalytic domain
LL3_02728	SSF109604	HD-domain/PDEase-like
LL3_02729	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02734	SSF141322	NfeD domain-like
LL3_02734	SSF52096	ClpP/crotonase
LL3_02735	SSF89095	GatB/YqeY motif
LL3_02738	SSF102114	Radical SAM enzymes
LL3_02739	SSF75217	alpha/beta knot
LL3_02739	SSF88697	PUA domain-like
LL3_02740	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02741	SSF46565	Chaperone J-domain
LL3_02741	SSF49493	HSP40/DnaJ peptide-binding domain
LL3_02741	SSF57938	DnaJ/Hsp40 cysteine-rich domain
LL3_02742	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
LL3_02742	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
LL3_02742	SSF53067	Actin-like ATPase domain
LL3_02743	SSF51064	Head domain of nucleotide exchange factor GrpE
LL3_02743	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
LL3_02744	SSF46785	"Winged helix" DNA-binding domain
LL3_02744	SSF55781	GAF domain-like
LL3_02745	SSF102114	Radical SAM enzymes
LL3_02746	SSF50447	Translation proteins
LL3_02746	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02746	SSF54980	EF-G C-terminal domain-like
LL3_02748	SSF53187	Zn-dependent exopeptidases
LL3_02749	SSF53163	HybD-like
LL3_02750	SSF46992	Ribosomal protein S20
LL3_02751	SSF48019	post-AAA+ oligomerization domain-like
LL3_02751	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02754	SSF53927	Cytidine deaminase-like
LL3_02755	SSF47781	RuvA domain 2-like
LL3_02756	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_02756	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02757	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02758	SSF81301	Nucleotidyltransferase
LL3_02759	SSF109604	HD-domain/PDEase-like
LL3_02760	SSF52374	Nucleotidylyl transferase
LL3_02761	SSF75471	YhbY-like
LL3_02762	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02762	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_02763	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02764	SSF56784	HAD-like
LL3_02765	SSF100985	Sporulation inhibitor Sda
LL3_02767	SSF52266	SGNH hydrolase
LL3_02768	SSF88713	Glycoside hydrolase/deacetylase
LL3_02769	SSF47090	PGBD-like
LL3_02769	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
LL3_02771	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_02772	SSF103473	MFS general substrate transporter
LL3_02774	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_02774	SSF88946	Sigma2 domain of RNA polymerase sigma factors
LL3_02775	SSF52266	SGNH hydrolase
LL3_02776	SSF46785	"Winged helix" DNA-binding domain
LL3_02777	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_02779	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02782	SSF103473	MFS general substrate transporter
LL3_02784	SSF109854	DinB/YfiT-like putative metalloenzymes
LL3_02786	SSF56784	HAD-like
LL3_02787	SSF56784	HAD-like
LL3_02789	SSF46689	Homeodomain-like
LL3_02789	SSF53697	SIS domain
LL3_02790	SSF51182	RmlC-like cupins
LL3_02791	SSF52794	PTS system IIB component-like
LL3_02791	SSF55804	Phoshotransferase/anion transport protein
LL3_02792	SSF52794	PTS system IIB component-like
LL3_02792	SSF55804	Phoshotransferase/anion transport protein
LL3_02792	SSF63520	PTS-regulatory domain, PRD
LL3_02794	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_02795	SSF55826	YbaK/ProRS associated domain
LL3_02798	SSF46785	"Winged helix" DNA-binding domain
LL3_02798	SSF53850	Periplasmic binding protein-like II
LL3_02799	SSF103473	MFS general substrate transporter
LL3_02800	SSF48264	Cytochrome P450
LL3_02800	SSF52218	Flavoproteins
LL3_02800	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
LL3_02800	SSF63380	Riboflavin synthase domain-like
LL3_02801	SSF46689	Homeodomain-like
LL3_02801	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_02803	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02808	SSF50692	ADC-like
LL3_02808	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
LL3_02808	SSF54292	2Fe-2S ferredoxin-like
LL3_02808	SSF54862	4Fe-4S ferredoxins
LL3_02811	SSF53383	PLP-dependent transferases
LL3_02812	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
LL3_02813	SSF53167	Purine and uridine phosphorylases
LL3_02814	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02817	SSF56519	Penicillin binding protein dimerisation domain
LL3_02817	SSF56601	beta-lactamase/transpeptidase-like
LL3_02818	SSF46557	GreA transcript cleavage protein, N-terminal domain
LL3_02818	SSF54534	FKBP-like
LL3_02819	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02822	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_02825	SSF53098	Ribonuclease H-like
LL3_02827	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
LL3_02827	SSF50447	Translation proteins
LL3_02827	SSF55186	ThrRS/AlaRS common domain
LL3_02827	SSF55681	Class II aaRS and biotin synthetases
LL3_02829	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02830	SSF53850	Periplasmic binding protein-like II
LL3_02831	SSF161098	MetI-like
LL3_02832	SSF161098	MetI-like
LL3_02835	SSF50346	PRC-barrel domain
LL3_02836	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02837	SSF81901	HCP-like
LL3_02838	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_02839	SSF53383	PLP-dependent transferases
LL3_02840	SSF46785	"Winged helix" DNA-binding domain
LL3_02841	SSF48019	post-AAA+ oligomerization domain-like
LL3_02841	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02843	SSF69572	Activating enzymes of the ubiquitin-like proteins
LL3_02844	SSF50249	Nucleic acid-binding proteins
LL3_02844	SSF55261	GAD domain-like
LL3_02844	SSF55681	Class II aaRS and biotin synthetases
LL3_02845	SSF52954	Class II aaRS ABD-related
LL3_02845	SSF55681	Class II aaRS and biotin synthetases
LL3_02848	SSF53187	Zn-dependent exopeptidases
LL3_02849	SSF69500	DTD-like
LL3_02850	SSF109604	HD-domain/PDEase-like
LL3_02850	SSF55021	ACT-like
LL3_02850	SSF81271	TGS-like
LL3_02850	SSF81301	Nucleotidyltransferase
LL3_02851	SSF53271	PRTase-like
LL3_02852	SSF64182	DHH phosphoesterases
LL3_02854	SSF116726	TrkA C-terminal domain-like
LL3_02855	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
LL3_02861	SSF51713	tRNA-guanine transglycosylase
LL3_02862	SSF111337	QueA-like
LL3_02864	SSF46785	"Winged helix" DNA-binding domain
LL3_02864	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02865	SSF46929	DNA helicase RuvA subunit, C-terminal domain
LL3_02865	SSF47781	RuvA domain 2-like
LL3_02865	SSF50249	Nucleic acid-binding proteins
LL3_02869	SSF54106	LysM domain
LL3_02870	SSF142754	NadA-like
LL3_02871	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
LL3_02871	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
LL3_02872	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
LL3_02872	SSF51905	FAD/NAD(P)-binding domain
LL3_02872	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
LL3_02873	SSF53383	PLP-dependent transferases
LL3_02874	SSF46785	"Winged helix" DNA-binding domain
LL3_02874	SSF75500	Putative transcriptional regulator TM1602, C-terminal domain
LL3_02875	SSF53850	Periplasmic binding protein-like II
LL3_02875	SSF55021	ACT-like
LL3_02876	SSF55021	ACT-like
LL3_02877	SSF102741	Obg GTP-binding protein C-terminal domain
LL3_02877	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02877	SSF82051	Obg GTP-binding protein N-terminal domain
LL3_02878	SSF55890	Sporulation response regulatory protein Spo0B
LL3_02879	SSF110324	Ribosomal L27 protein-like
LL3_02880	SSF118010	TM1457-like
LL3_02881	SSF141091	L21p-like
LL3_02883	SSF51261	Duplicated hybrid motif
LL3_02884	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02885	SSF63848	Cell-division inhibitor MinC, C-terminal domain
LL3_02888	SSF53067	Actin-like ATPase domain
LL3_02889	SSF102712	JAB1/MPN domain
LL3_02889	SSF47781	RuvA domain 2-like
LL3_02890	SSF52972	ITPase-like
LL3_02891	SSF110997	Sporulation related repeat
LL3_02893	SSF53244	MurD-like peptide ligases, peptide-binding domain
LL3_02893	SSF53623	MurD-like peptide ligases, catalytic domain
LL3_02894	SSF46589	tRNA-binding arm
LL3_02894	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
LL3_02894	SSF50677	ValRS/IleRS/LeuRS editing domain
LL3_02894	SSF52374	Nucleotidylyl transferase
LL3_02896	SSF56112	Protein kinase-like (PK-like)
LL3_02897	SSF54106	LysM domain
LL3_02898	SSF53383	PLP-dependent transferases
LL3_02899	SSF51569	Aldolase
LL3_02900	SSF69618	HemD-like
LL3_02901	SSF53850	Periplasmic binding protein-like II
LL3_02901	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
LL3_02903	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02903	SSF69075	Glutamyl tRNA-reductase dimerization domain
LL3_02903	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
LL3_02905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02906	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02906	SSF54211	Ribosomal protein S5 domain 2-like
LL3_02906	SSF88697	PUA domain-like
LL3_02907	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02907	SSF54211	Ribosomal protein S5 domain 2-like
LL3_02908	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02908	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
LL3_02909	SSF102735	Trigger factor ribosome-binding domain
LL3_02909	SSF109998	Triger factor/SurA peptide-binding domain-like
LL3_02909	SSF54534	FKBP-like
LL3_02910	SSF116965	Hypothetical protein MPN330
LL3_02910	SSF48452	TPR-like
LL3_02912	SSF52016	LeuD/IlvD-like
LL3_02913	SSF53732	Aconitase iron-sulfur domain
LL3_02914	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
LL3_02915	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
LL3_02915	SSF51569	Aldolase
LL3_02916	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_02916	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02917	SSF55021	ACT-like
LL3_02918	SSF52467	DHS-like NAD/FAD-binding domain
LL3_02918	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_02922	SSF56300	Metallo-dependent phosphatases
LL3_02923	SSF52972	ITPase-like
LL3_02924	SSF54211	Ribosomal protein S5 domain 2-like
LL3_02924	SSF55666	Ribonuclease PH domain 2-like
LL3_02926	SSF53681	Aspartate/glutamate racemase
LL3_02927	SSF46785	"Winged helix" DNA-binding domain
LL3_02929	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_02930	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
LL3_02931	SSF46548	alpha-helical ferredoxin
LL3_02931	SSF54292	2Fe-2S ferredoxin-like
LL3_02932	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
LL3_02932	SSF51905	FAD/NAD(P)-binding domain
LL3_02932	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
LL3_02933	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
LL3_02934	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
LL3_02935	SSF53633	Carbamate kinase-like
LL3_02935	SSF55021	ACT-like
LL3_02936	SSF46600	C-terminal UvrC-binding domain of UvrB
LL3_02936	SSF47781	RuvA domain 2-like
LL3_02936	SSF82771	GIY-YIG endonuclease
LL3_02937	SSF52833	Thioredoxin-like
LL3_02938	SSF51011	Glycosyl hydrolase domain
LL3_02938	SSF51445	(Trans)glycosidases
LL3_02939	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_02939	SSF52467	DHS-like NAD/FAD-binding domain
LL3_02940	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_02941	SSF52096	ClpP/crotonase
LL3_02942	SSF46689	Homeodomain-like
LL3_02942	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_02943	SSF56801	Acetyl-CoA synthetase-like
LL3_02947	SSF160443	SMR domain-like
LL3_02947	SSF48334	DNA repair protein MutS, domain III
LL3_02947	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02948	SSF47802	DNA polymerase beta, N-terminal domain-like
LL3_02948	SSF81301	Nucleotidyltransferase
LL3_02948	SSF89550	PHP domain-like
LL3_02950	SSF102829	Cell division protein ZapA-like
LL3_02951	SSF53098	Ribonuclease H-like
LL3_02952	SSF46955	Putative DNA-binding domain
LL3_02952	SSF50249	Nucleic acid-binding proteins
LL3_02952	SSF54991	Anticodon-binding domain of PheRS
LL3_02952	SSF55681	Class II aaRS and biotin synthetases
LL3_02952	SSF56037	PheT/TilS domain
LL3_02953	SSF46589	tRNA-binding arm
LL3_02953	SSF55681	Class II aaRS and biotin synthetases
LL3_02955	SSF55315	L30e-like
LL3_02955	SSF75217	alpha/beta knot
LL3_02958	SSF55103	FAD-linked oxidases, C-terminal domain
LL3_02958	SSF56176	FAD-binding/transporter-associated domain-like
LL3_02959	SSF46548	alpha-helical ferredoxin
LL3_02961	SSF51011	Glycosyl hydrolase domain
LL3_02961	SSF51445	(Trans)glycosidases
LL3_02962	SSF161098	MetI-like
LL3_02963	SSF161098	MetI-like
LL3_02964	SSF53850	Periplasmic binding protein-like II
LL3_02965	SSF56796	Dehydroquinate synthase-like
LL3_02966	SSF56784	HAD-like
LL3_02967	SSF53639	AraD/HMP-PK domain-like
LL3_02968	SSF53067	Actin-like ATPase domain
LL3_02969	SSF50443	FucI/AraA C-terminal domain-like
LL3_02969	SSF53743	FucI/AraA N-terminal and middle domains
LL3_02970	SSF75005	Arabinanase/levansucrase/invertase
LL3_02971	SSF101821	Aminopeptidase/glucanase lid domain
LL3_02971	SSF53187	Zn-dependent exopeptidases
LL3_02974	SSF74731	Ribosomal protein L20
LL3_02975	SSF54364	Translation initiation factor IF3, N-terminal domain
LL3_02975	SSF55200	Translation initiation factor IF3, C-terminal domain
LL3_02977	SSF90123	ABC transporter transmembrane region
LL3_02978	SSF52172	CheY-like
LL3_02979	SSF55781	GAF domain-like
LL3_02979	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_02981	SSF56784	HAD-like
LL3_02982	SSF52954	Class II aaRS ABD-related
LL3_02982	SSF55186	ThrRS/AlaRS common domain
LL3_02982	SSF55681	Class II aaRS and biotin synthetases
LL3_02982	SSF81271	TGS-like
LL3_02986	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02989	SSF56276	S-adenosylmethionine decarboxylase
LL3_02990	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_02990	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_02991	SSF46785	"Winged helix" DNA-binding domain
LL3_02992	SSF103473	MFS general substrate transporter
LL3_02993	SSF51430	NAD(P)-linked oxidoreductase
LL3_02994	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_02996	SSF46946	S13-like H2TH domain
LL3_02996	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
LL3_02996	SSF81624	N-terminal domain of MutM-like DNA repair proteins
LL3_02997	SSF47807	5' to 3' exonuclease, C-terminal subdomain
LL3_02997	SSF53098	Ribonuclease H-like
LL3_02997	SSF56672	DNA/RNA polymerases
LL3_02997	SSF88723	PIN domain-like
LL3_02998	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_02998	SSF55785	PYP-like sensor domain (PAS domain)
LL3_02998	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_02999	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_02999	SSF52172	CheY-like
LL3_03000	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03000	SSF56327	LDH C-terminal domain-like
LL3_03001	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
LL3_03002	SSF48256	Citrate synthase
LL3_03006	SSF50800	PK beta-barrel domain-like
LL3_03006	SSF51621	Phosphoenolpyruvate/pyruvate domain
LL3_03006	SSF52009	Phosphohistidine domain
LL3_03006	SSF52935	PK C-terminal domain-like
LL3_03007	SSF53784	Phosphofructokinase
LL3_03008	SSF52096	ClpP/crotonase
LL3_03009	SSF52096	ClpP/crotonase
LL3_03011	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03011	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_03012	SSF89550	PHP domain-like
LL3_03016	SSF64182	DHH phosphoesterases
LL3_03018	SSF46785	"Winged helix" DNA-binding domain
LL3_03018	SSF54631	CBS-domain pair
LL3_03018	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
LL3_03018	SSF75138	HprK N-terminal domain-like
LL3_03019	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_03020	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03022	SSF48557	L-aspartase-like
LL3_03023	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_03023	SSF69864	Argininosuccinate synthetase, C-terminal domain
LL3_03024	SSF53218	Molybdenum cofactor biosynthesis proteins
LL3_03025	SSF53067	Actin-like ATPase domain
LL3_03026	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03027	SSF52833	Thioredoxin-like
LL3_03031	SSF52096	ClpP/crotonase
LL3_03032	SSF111331	NAD kinase/diacylglycerol kinase-like
LL3_03033	SSF51338	Composite domain of metallo-dependent hydrolases
LL3_03033	SSF51556	Metallo-dependent hydrolases
LL3_03034	SSF56801	Acetyl-CoA synthetase-like
LL3_03036	SSF143437	THUMP domain-like
LL3_03036	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_03037	SSF53383	PLP-dependent transferases
LL3_03041	SSF89550	PHP domain-like
LL3_03042	SSF46689	Homeodomain-like
LL3_03043	SSF55781	GAF domain-like
LL3_03044	SSF55073	Nucleotide cyclase
LL3_03044	SSF55781	GAF domain-like
LL3_03046	SSF55174	Alpha-L RNA-binding motif
LL3_03047	SSF46458	Globin-like
LL3_03047	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
LL3_03047	SSF63380	Riboflavin synthase domain-like
LL3_03050	SSF52266	SGNH hydrolase
LL3_03052	SSF160240	Cation efflux protein cytoplasmic domain-like
LL3_03052	SSF161111	Cation efflux protein transmembrane domain-like
LL3_03053	SSF46785	"Winged helix" DNA-binding domain
LL3_03057	SSF52374	Nucleotidylyl transferase
LL3_03057	SSF55174	Alpha-L RNA-binding motif
LL3_03058	SSF56801	Acetyl-CoA synthetase-like
LL3_03059	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03060	SSF54631	CBS-domain pair
LL3_03061	SSF52768	Arginase/deacetylase
LL3_03062	SSF103088	OmpA-like
LL3_03064	SSF47413	lambda repressor-like DNA-binding domains
LL3_03064	SSF53822	Periplasmic binding protein-like I
LL3_03066	SSF51569	Aldolase
LL3_03067	SSF52833	Thioredoxin-like
LL3_03069	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_03070	SSF51984	MurCD N-terminal domain
LL3_03070	SSF53244	MurD-like peptide ligases, peptide-binding domain
LL3_03070	SSF53623	MurD-like peptide ligases, catalytic domain
LL3_03072	SSF46785	"Winged helix" DNA-binding domain
LL3_03072	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03073	SSF50249	Nucleic acid-binding proteins
LL3_03075	SSF52833	Thioredoxin-like
LL3_03076	SSF52309	N-(deoxy)ribosyltransferase-like
LL3_03077	SSF101821	Aminopeptidase/glucanase lid domain
LL3_03077	SSF53187	Zn-dependent exopeptidases
LL3_03079	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03079	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_03080	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_03081	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03083	SSF56112	Protein kinase-like (PK-like)
LL3_03084	SSF111331	NAD kinase/diacylglycerol kinase-like
LL3_03086	SSF55144	LigT-like
LL3_03087	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
LL3_03088	SSF53187	Zn-dependent exopeptidases
LL3_03088	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_03091	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03092	SSF46785	"Winged helix" DNA-binding domain
LL3_03093	SSF55120	Pseudouridine synthase
LL3_03093	SSF55174	Alpha-L RNA-binding motif
LL3_03095	SSF160996	HI0933 insert domain-like
LL3_03095	SSF51905	FAD/NAD(P)-binding domain
LL3_03100	SSF47413	lambda repressor-like DNA-binding domains
LL3_03100	SSF53822	Periplasmic binding protein-like I
LL3_03101	SSF53850	Periplasmic binding protein-like II
LL3_03102	SSF160964	MalF N-terminal region-like
LL3_03102	SSF161098	MetI-like
LL3_03103	SSF161098	MetI-like
LL3_03104	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03104	SSF56327	LDH C-terminal domain-like
LL3_03105	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03106	SSF52821	Rhodanese/Cell cycle control phosphatase
LL3_03107	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
LL3_03107	SSF50677	ValRS/IleRS/LeuRS editing domain
LL3_03107	SSF52374	Nucleotidylyl transferase
LL3_03110	SSF52091	SpoIIaa-like
LL3_03110	SSF55785	PYP-like sensor domain (PAS domain)
LL3_03111	SSF103473	MFS general substrate transporter
LL3_03114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03115	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03116	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_03116	SSF52172	CheY-like
LL3_03118	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03122	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03123	SSF46785	"Winged helix" DNA-binding domain
LL3_03126	SSF102114	Radical SAM enzymes
LL3_03127	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03130	SSF53474	alpha/beta-Hydrolases
LL3_03131	SSF51161	Trimeric LpxA-like enzymes
LL3_03133	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_03133	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_03134	SSF55973	S-adenosylmethionine synthetase
LL3_03135	SSF53795	PEP carboxykinase-like
LL3_03135	SSF68923	PEP carboxykinase N-terminal domain
LL3_03136	SSF88697	PUA domain-like
LL3_03137	SSF53474	alpha/beta-Hydrolases
LL3_03138	SSF53850	Periplasmic binding protein-like II
LL3_03139	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03140	SSF161098	MetI-like
LL3_03141	SSF55811	Nudix
LL3_03143	SSF47240	Ferritin-like
LL3_03146	SSF63411	LuxS/MPP-like metallohydrolase
LL3_03148	SSF53056	beta-carbonic anhydrase, cab
LL3_03149	SSF143800	L28p-like
LL3_03154	SSF51604	Enolase C-terminal domain-like
LL3_03154	SSF54826	Enolase N-terminal domain-like
LL3_03155	SSF56801	Acetyl-CoA synthetase-like
LL3_03156	SSF52096	ClpP/crotonase
LL3_03157	SSF53474	alpha/beta-Hydrolases
LL3_03158	SSF52467	DHS-like NAD/FAD-binding domain
LL3_03158	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_03159	SSF56322	ADC synthase
LL3_03160	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
LL3_03164	SSF117892	Band 7/SPFH domain
LL3_03166	SSF109854	DinB/YfiT-like putative metalloenzymes
LL3_03167	SSF50800	PK beta-barrel domain-like
LL3_03168	SSF56796	Dehydroquinate synthase-like
LL3_03169	SSF53720	ALDH-like
LL3_03170	SSF46785	"Winged helix" DNA-binding domain
LL3_03172	SSF116726	TrkA C-terminal domain-like
LL3_03172	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03173	SSF82057	Prokaryotic SH3-related domain
LL3_03175	SSF46458	Globin-like
LL3_03175	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
LL3_03175	SSF63380	Riboflavin synthase domain-like
LL3_03180	SSF48452	TPR-like
LL3_03184	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03184	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_03185	SSF52317	Class I glutamine amidotransferase-like
LL3_03186	SSF103190	Sensory domain-like
LL3_03186	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_03187	SSF103190	Sensory domain-like
LL3_03187	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_03188	SSF103190	Sensory domain-like
LL3_03188	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_03189	SSF103190	Sensory domain-like
LL3_03189	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
LL3_03192	SSF111038	YjbQ-like
LL3_03192	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
LL3_03193	SSF51011	Glycosyl hydrolase domain
LL3_03193	SSF51445	(Trans)glycosidases
LL3_03195	SSF54631	CBS-domain pair
LL3_03195	SSF56176	FAD-binding/transporter-associated domain-like
LL3_03199	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03199	SSF81324	Voltage-gated potassium channels
LL3_03200	SSF160755	YugN-like
LL3_03202	SSF53697	SIS domain
LL3_03204	SSF56796	Dehydroquinate synthase-like
LL3_03205	SSF56796	Dehydroquinate synthase-like
LL3_03208	SSF50249	Nucleic acid-binding proteins
LL3_03209	SSF53383	PLP-dependent transferases
LL3_03210	SSF46785	"Winged helix" DNA-binding domain
LL3_03210	SSF54909	Dimeric alpha+beta barrel
LL3_03211	SSF53474	alpha/beta-Hydrolases
LL3_03212	SSF116922	YugE-like
LL3_03213	SSF53383	PLP-dependent transferases
LL3_03214	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_03214	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03215	SSF141251	Kinase-associated protein B-like
LL3_03216	SSF53098	Ribonuclease H-like
LL3_03217	SSF103473	MFS general substrate transporter
LL3_03218	SSF53955	Lysozyme-like
LL3_03218	SSF56601	beta-lactamase/transpeptidase-like
LL3_03221	SSF103190	Sensory domain-like
LL3_03221	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03221	SSF55890	Sporulation response regulatory protein Spo0B
LL3_03222	SSF52172	CheY-like
LL3_03223	SSF53822	Periplasmic binding protein-like I
LL3_03225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03236	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
LL3_03237	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_03237	SSF52172	CheY-like
LL3_03238	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03240	SSF48576	Terpenoid synthases
LL3_03244	SSF109604	HD-domain/PDEase-like
LL3_03244	SSF141868	EAL domain-like
LL3_03245	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
LL3_03245	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
LL3_03246	SSF52499	Isochorismatase-like hydrolases
LL3_03247	SSF160515	YueI-like
LL3_03252	SSF109604	HD-domain/PDEase-like
LL3_03253	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03255	SSF57997	Tropomyosin
LL3_03256	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03258	SSF54236	Ubiquitin-like
LL3_03259	SSF140453	EsxAB dimer-like
LL3_03262	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03262	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
LL3_03264	SSF160582	MbtH-like
LL3_03265	SSF47336	ACP-like
LL3_03265	SSF52777	CoA-dependent acyltransferases
LL3_03265	SSF53474	alpha/beta-Hydrolases
LL3_03265	SSF56801	Acetyl-CoA synthetase-like
LL3_03266	SSF47336	ACP-like
LL3_03266	SSF52499	Isochorismatase-like hydrolases
LL3_03267	SSF56801	Acetyl-CoA synthetase-like
LL3_03268	SSF56322	ADC synthase
LL3_03269	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03270	SSF53474	alpha/beta-Hydrolases
LL3_03271	SSF56524	Oxidoreductase molybdopterin-binding domain
LL3_03274	SSF52949	Macro domain-like
LL3_03274	SSF53187	Zn-dependent exopeptidases
LL3_03276	SSF50685	Barwin-like endoglucanases
LL3_03279	SSF51905	FAD/NAD(P)-binding domain
LL3_03281	SSF51905	FAD/NAD(P)-binding domain
LL3_03283	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
LL3_03286	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03291	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03292	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03293	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03294	SSF89360	HesB-like domain
LL3_03295	SSF54506	Diaminopimelate epimerase-like
LL3_03298	SSF51905	FAD/NAD(P)-binding domain
LL3_03299	SSF52833	Thioredoxin-like
LL3_03300	SSF117916	Fe-S cluster assembly (FSCA) domain-like
LL3_03301	SSF53474	alpha/beta-Hydrolases
LL3_03301	SSF82171	DPP6 N-terminal domain-like
LL3_03302	SSF54211	Ribosomal protein S5 domain 2-like
LL3_03302	SSF55060	GHMP Kinase, C-terminal domain
LL3_03303	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
LL3_03304	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03304	SSF55021	ACT-like
LL3_03304	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_03306	SSF56112	Protein kinase-like (PK-like)
LL3_03307	SSF101307	YutG-like
LL3_03308	SSF56784	HAD-like
LL3_03311	SSF102114	Radical SAM enzymes
LL3_03312	SSF51261	Duplicated hybrid motif
LL3_03314	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
LL3_03314	SSF56300	Metallo-dependent phosphatases
LL3_03316	SSF117396	TM1631-like
LL3_03318	SSF51338	Composite domain of metallo-dependent hydrolases
LL3_03318	SSF51556	Metallo-dependent hydrolases
LL3_03323	SSF103473	MFS general substrate transporter
LL3_03324	SSF53383	PLP-dependent transferases
LL3_03325	SSF53187	Zn-dependent exopeptidases
LL3_03325	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_03326	SSF54060	His-Me finger endonucleases
LL3_03327	SSF50331	MOP-like
LL3_03327	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03328	SSF46785	"Winged helix" DNA-binding domain
LL3_03328	SSF64288	Chorismate lyase-like
LL3_03329	SSF53613	Ribokinase-like
LL3_03330	SSF161098	MetI-like
LL3_03331	SSF161098	MetI-like
LL3_03332	SSF53850	Periplasmic binding protein-like II
LL3_03333	SSF53697	SIS domain
LL3_03334	SSF46955	Putative DNA-binding domain
LL3_03339	SSF82771	GIY-YIG endonuclease
LL3_03340	SSF51905	FAD/NAD(P)-binding domain
LL3_03340	SSF54373	FAD-linked reductases, C-terminal domain
LL3_03341	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03344	SSF53955	Lysozyme-like
LL3_03346	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
LL3_03351	SSF51126	Pectin lyase-like
LL3_03354	SSF53955	Lysozyme-like
LL3_03363	SSF56563	Major capsid protein gp5
LL3_03371	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03374	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03375	SSF56672	DNA/RNA polymerases
LL3_03376	SSF50249	Nucleic acid-binding proteins
LL3_03381	SSF47413	lambda repressor-like DNA-binding domains
LL3_03382	SSF47413	lambda repressor-like DNA-binding domains
LL3_03384	SSF56349	DNA breaking-rejoining enzymes
LL3_03385	SSF101960	Stabilizer of iron transporter SufD
LL3_03386	SSF82649	SufE/NifU
LL3_03387	SSF53383	PLP-dependent transferases
LL3_03388	SSF101960	Stabilizer of iron transporter SufD
LL3_03389	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03391	SSF69118	AhpD-like
LL3_03392	SSF53850	Periplasmic binding protein-like II
LL3_03393	SSF161098	MetI-like
LL3_03394	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03394	SSF55021	ACT-like
LL3_03396	SSF55718	SCP-like
LL3_03397	SSF52833	Thioredoxin-like
LL3_03398	SSF110455	Toprim domain
LL3_03400	SSF51230	Single hybrid motif
LL3_03401	SSF52833	Thioredoxin-like
LL3_03402	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
LL3_03402	SSF56645	Acyl-CoA dehydrogenase NM domain-like
LL3_03403	SSF53901	Thiolase-like
LL3_03404	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_03404	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03404	SSF52096	ClpP/crotonase
LL3_03406	SSF51730	FAD-linked oxidoreductase
LL3_03409	SSF46785	"Winged helix" DNA-binding domain
LL3_03410	SSF103473	MFS general substrate transporter
LL3_03411	SSF52980	Restriction endonuclease-like
LL3_03412	SSF47413	lambda repressor-like DNA-binding domains
LL3_03413	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03415	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03417	SSF55486	Metalloproteases ("zincins"), catalytic domain
LL3_03418	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03419	SSF47240	Ferritin-like
LL3_03420	SSF50156	PDZ domain-like
LL3_03420	SSF50494	Trypsin-like serine proteases
LL3_03422	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_03422	SSF52172	CheY-like
LL3_03423	SSF158472	HAMP domain-like
LL3_03423	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_03423	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03425	SSF46689	Homeodomain-like
LL3_03426	SSF48557	L-aspartase-like
LL3_03431	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_03431	SSF52172	CheY-like
LL3_03432	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03437	SSF103473	MFS general substrate transporter
LL3_03438	SSF89028	Cobalamin adenosyltransferase-like
LL3_03439	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03440	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_03441	SSF53807	"Helical backbone" metal receptor
LL3_03442	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03443	SSF63829	Calcium-dependent phosphotriesterase
LL3_03444	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_03444	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03445	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_03445	SSF52172	CheY-like
LL3_03448	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_03450	SSF51182	RmlC-like cupins
LL3_03452	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03453	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_03454	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_03455	SSF53807	"Helical backbone" metal receptor
LL3_03456	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03460	SSF53649	Alkaline phosphatase-like
LL3_03461	SSF53649	Alkaline phosphatase-like
LL3_03462	SSF46955	Putative DNA-binding domain
LL3_03462	SSF53850	Periplasmic binding protein-like II
LL3_03463	SSF53850	Periplasmic binding protein-like II
LL3_03464	SSF161098	MetI-like
LL3_03465	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_03465	SSF52172	CheY-like
LL3_03466	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03467	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03470	SSF51430	NAD(P)-linked oxidoreductase
LL3_03473	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
LL3_03473	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
LL3_03474	SSF52218	Flavoproteins
LL3_03474	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
LL3_03474	SSF63380	Riboflavin synthase domain-like
LL3_03475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03477	SSF55486	Metalloproteases ("zincins"), catalytic domain
LL3_03478	SSF158442	DsbB-like
LL3_03479	SSF52833	Thioredoxin-like
LL3_03480	SSF55008	HMA, heavy metal-associated domain
LL3_03480	SSF56784	HAD-like
LL3_03480	SSF81653	Calcium ATPase, transduction domain A
LL3_03480	SSF81665	Calcium ATPase, transmembrane domain M
LL3_03481	SSF55008	HMA, heavy metal-associated domain
LL3_03481	SSF56784	HAD-like
LL3_03481	SSF81653	Calcium ATPase, transduction domain A
LL3_03481	SSF81665	Calcium ATPase, transmembrane domain M
LL3_03482	SSF55008	HMA, heavy metal-associated domain
LL3_03484	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03485	SSF52218	Flavoproteins
LL3_03486	SSF51679	Bacterial luciferase-like
LL3_03487	SSF52833	Thioredoxin-like
LL3_03488	SSF51679	Bacterial luciferase-like
LL3_03489	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03490	SSF161098	MetI-like
LL3_03491	SSF161098	MetI-like
LL3_03493	SSF53850	Periplasmic binding protein-like II
LL3_03494	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03495	SSF46785	"Winged helix" DNA-binding domain
LL3_03495	SSF53850	Periplasmic binding protein-like II
LL3_03496	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03497	SSF52038	Barstar-related
LL3_03498	SSF74982	Small protein B (SmpB)
LL3_03499	SSF50249	Nucleic acid-binding proteins
LL3_03500	SSF53474	alpha/beta-Hydrolases
LL3_03502	SSF47413	lambda repressor-like DNA-binding domains
LL3_03503	SSF47413	lambda repressor-like DNA-binding domains
LL3_03504	SSF47413	lambda repressor-like DNA-binding domains
LL3_03505	SSF46785	"Winged helix" DNA-binding domain
LL3_03506	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_03506	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03507	SSF52172	CheY-like
LL3_03510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03511	SSF161098	MetI-like
LL3_03512	SSF53850	Periplasmic binding protein-like II
LL3_03513	SSF161098	MetI-like
LL3_03514	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03514	SSF54631	CBS-domain pair
LL3_03515	SSF46785	"Winged helix" DNA-binding domain
LL3_03516	SSF161098	MetI-like
LL3_03517	SSF53850	Periplasmic binding protein-like II
LL3_03518	SSF161098	MetI-like
LL3_03519	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03519	SSF54631	CBS-domain pair
LL3_03520	SSF46785	"Winged helix" DNA-binding domain
LL3_03524	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03525	SSF103473	MFS general substrate transporter
LL3_03526	SSF51658	Xylose isomerase-like
LL3_03527	SSF102588	LmbE-like
LL3_03529	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03530	SSF53383	PLP-dependent transferases
LL3_03531	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03532	SSF53383	PLP-dependent transferases
LL3_03533	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_03533	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03533	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
LL3_03534	SSF52025	PA domain
LL3_03534	SSF53187	Zn-dependent exopeptidases
LL3_03536	SSF51604	Enolase C-terminal domain-like
LL3_03536	SSF54826	Enolase N-terminal domain-like
LL3_03537	SSF53649	Alkaline phosphatase-like
LL3_03537	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
LL3_03538	SSF51351	Triosephosphate isomerase (TIM)
LL3_03539	SSF53748	Phosphoglycerate kinase
LL3_03541	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03541	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_03542	SSF100950	NagB/RpiA/CoA transferase-like
LL3_03542	SSF46785	"Winged helix" DNA-binding domain
LL3_03543	SSF103473	MFS general substrate transporter
LL3_03544	SSF103473	MFS general substrate transporter
LL3_03545	SSF46785	"Winged helix" DNA-binding domain
LL3_03545	SSF53822	Periplasmic binding protein-like I
LL3_03546	SSF51679	Bacterial luciferase-like
LL3_03547	SSF46785	"Winged helix" DNA-binding domain
LL3_03547	SSF53850	Periplasmic binding protein-like II
LL3_03548	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_03553	SSF46689	Homeodomain-like
LL3_03553	SSF53697	SIS domain
LL3_03554	SSF53067	Actin-like ATPase domain
LL3_03556	SSF100950	NagB/RpiA/CoA transferase-like
LL3_03557	SSF100950	NagB/RpiA/CoA transferase-like
LL3_03557	SSF46548	alpha-helical ferredoxin
LL3_03560	SSF46785	"Winged helix" DNA-binding domain
LL3_03560	SSF48008	GntR ligand-binding domain-like
LL3_03563	SSF158388	YvfG-like
LL3_03565	SSF53383	PLP-dependent transferases
LL3_03566	SSF51161	Trimeric LpxA-like enzymes
LL3_03569	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03571	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03573	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03574	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03575	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03576	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03577	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03579	SSF47406	SinR repressor dimerisation domain-like
LL3_03579	SSF47413	lambda repressor-like DNA-binding domains
LL3_03580	SSF53474	alpha/beta-Hydrolases
LL3_03582	SSF53597	Dihydrofolate reductase-like
LL3_03583	SSF51905	FAD/NAD(P)-binding domain
LL3_03584	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_03586	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03587	SSF50814	Lipocalins
LL3_03592	SSF53474	alpha/beta-Hydrolases
LL3_03594	SSF49899	Concanavalin A-like lectins/glucanases
LL3_03594	SSF75005	Arabinanase/levansucrase/invertase
LL3_03595	SSF103473	MFS general substrate transporter
LL3_03597	SSF47413	lambda repressor-like DNA-binding domains
LL3_03597	SSF53822	Periplasmic binding protein-like I
LL3_03598	SSF52096	ClpP/crotonase
LL3_03599	SSF46785	"Winged helix" DNA-binding domain
LL3_03599	SSF53850	Periplasmic binding protein-like II
LL3_03600	SSF54506	Diaminopimelate epimerase-like
LL3_03601	SSF103473	MFS general substrate transporter
LL3_03603	SSF102405	MCP/YpsA-like
LL3_03604	SSF101386	all-alpha NTP pyrophosphatases
LL3_03605	SSF52091	SpoIIaa-like
LL3_03606	SSF53056	beta-carbonic anhydrase, cab
LL3_03608	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03608	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
LL3_03609	SSF53933	Microbial ribonucleases
LL3_03610	SSF54001	Cysteine proteinases
LL3_03611	SSF55594	HPr-like
LL3_03612	SSF55608	Homing endonucleases
LL3_03613	SSF142338	CofD-like
LL3_03614	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03615	SSF55811	Nudix
LL3_03617	SSF51905	FAD/NAD(P)-binding domain
LL3_03618	SSF54001	Cysteine proteinases
LL3_03621	SSF48452	TPR-like
LL3_03622	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_03622	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03623	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_03623	SSF52172	CheY-like
LL3_03624	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03624	SSF90123	ABC transporter transmembrane region
LL3_03625	SSF101386	all-alpha NTP pyrophosphatases
LL3_03625	SSF141734	HisI-like
LL3_03626	SSF51366	Ribulose-phoshate binding barrel
LL3_03627	SSF51366	Ribulose-phoshate binding barrel
LL3_03628	SSF52317	Class I glutamine amidotransferase-like
LL3_03629	SSF54211	Ribosomal protein S5 domain 2-like
LL3_03630	SSF53720	ALDH-like
LL3_03631	SSF53850	Periplasmic binding protein-like II
LL3_03632	SSF55681	Class II aaRS and biotin synthetases
LL3_03633	SSF54001	Cysteine proteinases
LL3_03634	SSF51161	Trimeric LpxA-like enzymes
LL3_03635	SSF56784	HAD-like
LL3_03637	SSF53795	PEP carboxykinase-like
LL3_03637	SSF75138	HprK N-terminal domain-like
LL3_03638	SSF51338	Composite domain of metallo-dependent hydrolases
LL3_03638	SSF51556	Metallo-dependent hydrolases
LL3_03639	SSF100950	NagB/RpiA/CoA transferase-like
LL3_03640	SSF46785	"Winged helix" DNA-binding domain
LL3_03640	SSF64288	Chorismate lyase-like
LL3_03641	SSF46689	Homeodomain-like
LL3_03641	SSF48498	Tetracyclin repressor-like, C-terminal domain
LL3_03642	SSF56300	Metallo-dependent phosphatases
LL3_03648	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03649	SSF46600	C-terminal UvrC-binding domain of UvrB
LL3_03649	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03651	SSF52009	Phosphohistidine domain
LL3_03651	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_03652	SSF46689	Homeodomain-like
LL3_03653	SSF103473	MFS general substrate transporter
LL3_03654	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
LL3_03655	SSF50974	Nitrous oxide reductase, N-terminal domain
LL3_03656	SSF50156	PDZ domain-like
LL3_03658	SSF47090	PGBD-like
LL3_03658	SSF50156	PDZ domain-like
LL3_03658	SSF52096	ClpP/crotonase
LL3_03659	SSF51126	Pectin lyase-like
LL3_03661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03662	SSF46626	Cytochrome c
LL3_03664	SSF75620	Release factor
LL3_03665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03665	SSF81767	Pre-protein crosslinking domain of SecA
LL3_03665	SSF81886	Helical scaffold and wing domains of SecA
LL3_03666	SSF69754	Ribosome binding protein Y (YfiA homologue)
LL3_03669	SSF101116	Flagellar export chaperone FliS
LL3_03671	SSF64518	Phase 1 flagellin
LL3_03672	SSF117130	CsrA-like
LL3_03673	SSF141457	BH3618-like
LL3_03675	SSF64518	Phase 1 flagellin
LL3_03676	SSF64518	Phase 1 flagellin
LL3_03677	SSF140566	FlgN-like
LL3_03678	SSF101498	Anti-sigma factor FlgM
LL3_03680	SSF53271	PRTase-like
LL3_03682	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03683	SSF82549	DAK1/DegV-like
LL3_03684	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_03684	SSF52172	CheY-like
LL3_03685	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_03686	SSF54211	Ribosomal protein S5 domain 2-like
LL3_03686	SSF54980	EF-G C-terminal domain-like
LL3_03689	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03690	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03693	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_03693	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03693	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
LL3_03694	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03697	SSF53187	Zn-dependent exopeptidases
LL3_03701	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03703	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03704	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03706	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03707	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03708	SSF52374	Nucleotidylyl transferase
LL3_03710	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03712	SSF51182	RmlC-like cupins
LL3_03717	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03717	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03718	SSF103473	MFS general substrate transporter
LL3_03721	SSF56784	HAD-like
LL3_03723	SSF54001	Cysteine proteinases
LL3_03725	SSF56300	Metallo-dependent phosphatases
LL3_03727	SSF53623	MurD-like peptide ligases, catalytic domain
LL3_03733	SSF47413	lambda repressor-like DNA-binding domains
LL3_03733	SSF53822	Periplasmic binding protein-like I
LL3_03734	SSF53613	Ribokinase-like
LL3_03735	SSF102546	RbsD-like
LL3_03736	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03738	SSF53822	Periplasmic binding protein-like I
LL3_03740	SSF52218	Flavoproteins
LL3_03741	SSF117856	AF0104/ALDC/Ptd012-like
LL3_03742	SSF52467	DHS-like NAD/FAD-binding domain
LL3_03742	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_03743	SSF46785	"Winged helix" DNA-binding domain
LL3_03743	SSF53850	Periplasmic binding protein-like II
LL3_03751	SSF50475	FMN-binding split barrel
LL3_03753	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_03755	SSF46785	"Winged helix" DNA-binding domain
LL3_03755	SSF54909	Dimeric alpha+beta barrel
LL3_03760	SSF160631	SMI1/KNR4-like
LL3_03768	SSF103032	Hypothetical protein YwqG
LL3_03769	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
LL3_03769	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03769	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
LL3_03771	SSF89550	PHP domain-like
LL3_03772	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03776	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03777	SSF56784	HAD-like
LL3_03778	SSF100950	NagB/RpiA/CoA transferase-like
LL3_03778	SSF46785	"Winged helix" DNA-binding domain
LL3_03779	SSF50249	Nucleic acid-binding proteins
LL3_03782	SSF81330	Gated mechanosensitive channel
LL3_03783	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
LL3_03784	SSF48452	TPR-like
LL3_03785	SSF117143	Flagellar hook protein flgE
LL3_03786	SSF117143	Flagellar hook protein flgE
LL3_03788	SSF53067	Actin-like ATPase domain
LL3_03790	SSF46785	"Winged helix" DNA-binding domain
LL3_03791	SSF103473	MFS general substrate transporter
LL3_03793	SSF103473	MFS general substrate transporter
LL3_03794	SSF52499	Isochorismatase-like hydrolases
LL3_03795	SSF111352	Ammonium transporter
LL3_03796	SSF54913	GlnB-like
LL3_03798	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
LL3_03800	SSF51261	Duplicated hybrid motif
LL3_03801	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03805	SSF56024	Phospholipase D/nuclease
LL3_03808	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03809	SSF46785	"Winged helix" DNA-binding domain
LL3_03810	SSF51338	Composite domain of metallo-dependent hydrolases
LL3_03810	SSF51556	Metallo-dependent hydrolases
LL3_03811	SSF51278	Urease, beta-subunit
LL3_03812	SSF54111	Urease, gamma-subunit
LL3_03814	SSF69047	Hypothetical protein YjbJ
LL3_03816	SSF48452	TPR-like
LL3_03817	SSF102114	Radical SAM enzymes
LL3_03818	SSF53927	Cytidine deaminase-like
LL3_03820	SSF53300	vWA-like
LL3_03821	SSF53300	vWA-like
LL3_03823	SSF55205	EPT/RTPC-like
LL3_03824	SSF143842	YwmB-like
LL3_03827	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
LL3_03827	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
LL3_03828	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
LL3_03828	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
LL3_03828	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03829	SSF52943	ATP synthase (F1-ATPase), gamma subunit
LL3_03830	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
LL3_03830	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
LL3_03830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03831	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
LL3_03832	SSF81573	F1F0 ATP synthase subunit B, membrane domain
LL3_03833	SSF81333	F1F0 ATP synthase subunit C
LL3_03834	SSF81336	F1F0 ATP synthase subunit A
LL3_03837	SSF53271	PRTase-like
LL3_03838	SSF53383	PLP-dependent transferases
LL3_03839	SSF110710	TTHA0583/YokD-like
LL3_03840	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
LL3_03841	SSF52788	Phosphotyrosine protein phosphatases I
LL3_03843	SSF55821	YrdC/RibB
LL3_03848	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03849	SSF75620	Release factor
LL3_03850	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_03851	SSF46955	Putative DNA-binding domain
LL3_03853	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03853	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_03854	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03854	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
LL3_03855	SSF143800	L28p-like
LL3_03856	SSF50249	Nucleic acid-binding proteins
LL3_03856	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03856	SSF68912	Rho N-terminal domain-like
LL3_03857	SSF56655	Carbohydrate phosphatase
LL3_03858	SSF55205	EPT/RTPC-like
LL3_03859	SSF51569	Aldolase
LL3_03860	SSF51569	Aldolase
LL3_03861	SSF52172	CheY-like
LL3_03862	SSF53697	SIS domain
LL3_03863	SSF52317	Class I glutamine amidotransferase-like
LL3_03863	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03865	SSF103501	Respiratory nitrate reductase 1 gamma chain
LL3_03865	SSF46548	alpha-helical ferredoxin
LL3_03866	SSF56024	Phospholipase D/nuclease
LL3_03867	SSF51658	Xylose isomerase-like
LL3_03869	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_03869	SSF90123	ABC transporter transmembrane region
LL3_03870	SSF56024	Phospholipase D/nuclease
LL3_03871	SSF103501	Respiratory nitrate reductase 1 gamma chain
LL3_03872	SSF89155	TorD-like
LL3_03873	SSF54862	4Fe-4S ferredoxins
LL3_03874	SSF50692	ADC-like
LL3_03874	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
LL3_03875	SSF51206	cAMP-binding domain-like
LL3_03877	SSF46785	"Winged helix" DNA-binding domain
LL3_03877	SSF51206	cAMP-binding domain-like
LL3_03878	SSF103473	MFS general substrate transporter
LL3_03879	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
LL3_03879	SSF52374	Nucleotidylyl transferase
LL3_03879	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
LL3_03880	SSF50814	Lipocalins
LL3_03882	SSF50974	Nitrous oxide reductase, N-terminal domain
LL3_03883	SSF48452	TPR-like
LL3_03885	SSF52768	Arginase/deacetylase
LL3_03886	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03887	SSF53955	Lysozyme-like
LL3_03887	SSF56601	beta-lactamase/transpeptidase-like
LL3_03891	SSF55331	Tautomerase/MIF
LL3_03892	SSF46785	"Winged helix" DNA-binding domain
LL3_03895	SSF109604	HD-domain/PDEase-like
LL3_03899	SSF46785	"Winged helix" DNA-binding domain
LL3_03907	SSF55681	Class II aaRS and biotin synthetases
LL3_03908	SSF46785	"Winged helix" DNA-binding domain
LL3_03908	SSF53850	Periplasmic binding protein-like II
LL3_03910	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
LL3_03911	SSF54909	Dimeric alpha+beta barrel
LL3_03912	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03913	SSF53383	PLP-dependent transferases
LL3_03914	SSF103473	MFS general substrate transporter
LL3_03915	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_03916	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03917	SSF51182	RmlC-like cupins
LL3_03918	SSF53850	Periplasmic binding protein-like II
LL3_03919	SSF103473	MFS general substrate transporter
LL3_03920	SSF103473	MFS general substrate transporter
LL3_03922	SSF53187	Zn-dependent exopeptidases
LL3_03923	SSF53720	ALDH-like
LL3_03925	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03925	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
LL3_03927	SSF51182	RmlC-like cupins
LL3_03928	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03929	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03930	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03931	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03932	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03933	SSF51269	AFP III-like domain
LL3_03933	SSF51569	Aldolase
LL3_03934	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03935	SSF53383	PLP-dependent transferases
LL3_03936	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_03937	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03942	SSF52141	Uracil-DNA glycosylase-like
LL3_03943	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03945	SSF53613	Ribokinase-like
LL3_03947	SSF49899	Concanavalin A-like lectins/glucanases
LL3_03947	SSF75005	Arabinanase/levansucrase/invertase
LL3_03948	SSF55604	Glucose permease domain IIB
LL3_03949	SSF50151	SacY-like RNA-binding domain
LL3_03949	SSF63520	PTS-regulatory domain, PRD
LL3_03951	SSF52025	PA domain
LL3_03951	SSF52743	Subtilisin-like
LL3_03952	SSF51679	Bacterial luciferase-like
LL3_03953	SSF46785	"Winged helix" DNA-binding domain
LL3_03954	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_03955	SSF54427	NTF2-like
LL3_03956	SSF54909	Dimeric alpha+beta barrel
LL3_03957	SSF55469	FMN-dependent nitroreductase-like
LL3_03959	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_03963	SSF81452	Cytochrome c oxidase subunit III-like
LL3_03964	SSF81442	Cytochrome c oxidase subunit I-like
LL3_03965	SSF49503	Cupredoxins
LL3_03965	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
LL3_03968	SSF54211	Ribosomal protein S5 domain 2-like
LL3_03968	SSF55060	GHMP Kinase, C-terminal domain
LL3_03970	SSF46689	Homeodomain-like
LL3_03971	SSF47406	SinR repressor dimerisation domain-like
LL3_03973	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03975	SSF52833	Thioredoxin-like
LL3_03976	SSF54909	Dimeric alpha+beta barrel
LL3_03979	SSF51391	Thiamin phosphate synthase
LL3_03980	SSF53613	Ribokinase-like
LL3_03981	SSF46785	"Winged helix" DNA-binding domain
LL3_03981	SSF53850	Periplasmic binding protein-like II
LL3_03986	SSF46955	Putative DNA-binding domain
LL3_03986	SSF89082	Antibiotic binding domain of TipA-like multidrug resistance regulators
LL3_03988	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_03988	SSF88697	PUA domain-like
LL3_03989	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_03991	SSF52743	Subtilisin-like
LL3_03991	SSF54897	Protease propeptides/inhibitors
LL3_03992	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_03995	SSF81301	Nucleotidyltransferase
LL3_03999	SSF56801	Acetyl-CoA synthetase-like
LL3_04001	SSF47336	ACP-like
LL3_04002	SSF52266	SGNH hydrolase
LL3_04003	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
LL3_04004	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_04004	SSF56327	LDH C-terminal domain-like
LL3_04005	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
LL3_04007	SSF52794	PTS system IIB component-like
LL3_04010	SSF50486	FMT C-terminal domain-like
LL3_04012	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_04013	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
LL3_04014	SSF53807	"Helical backbone" metal receptor
LL3_04015	SSF46785	"Winged helix" DNA-binding domain
LL3_04017	SSF52794	PTS system IIB component-like
LL3_04018	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
LL3_04020	SSF51445	(Trans)glycosidases
LL3_04021	SSF53067	Actin-like ATPase domain
LL3_04022	SSF51182	RmlC-like cupins
LL3_04023	SSF51445	(Trans)glycosidases
LL3_04024	SSF56634	Heme-dependent catalase-like
LL3_04025	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
LL3_04027	SSF53613	Ribokinase-like
LL3_04028	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04028	SSF90123	ABC transporter transmembrane region
LL3_04029	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04029	SSF90123	ABC transporter transmembrane region
LL3_04033	SSF88713	Glycoside hydrolase/deacetylase
LL3_04034	SSF50331	MOP-like
LL3_04034	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04035	SSF46689	Homeodomain-like
LL3_04038	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_04040	SSF53187	Zn-dependent exopeptidases
LL3_04040	SSF55031	Bacterial exopeptidase dimerisation domain
LL3_04044	SSF54518	Tubby C-terminal domain-like
LL3_04045	SSF51726	UROD/MetE-like
LL3_04046	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_04051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04052	SSF52317	Class I glutamine amidotransferase-like
LL3_04052	SSF56634	Heme-dependent catalase-like
LL3_04054	SSF49899	Concanavalin A-like lectins/glucanases
LL3_04055	SSF50151	SacY-like RNA-binding domain
LL3_04055	SSF63520	PTS-regulatory domain, PRD
LL3_04056	SSF103473	MFS general substrate transporter
LL3_04057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04061	SSF63829	Calcium-dependent phosphotriesterase
LL3_04068	SSF51126	Pectin lyase-like
LL3_04069	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_04070	SSF52402	Adenine nucleotide alpha hydrolases-like
LL3_04071	SSF51445	(Trans)glycosidases
LL3_04072	SSF51261	Duplicated hybrid motif
LL3_04072	SSF55604	Glucose permease domain IIB
LL3_04073	SSF52980	Restriction endonuclease-like
LL3_04074	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_04075	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_04076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04079	SSF75005	Arabinanase/levansucrase/invertase
LL3_04080	SSF111064	Hut operon positive regulatory protein HutP
LL3_04081	SSF48557	L-aspartase-like
LL3_04082	SSF111326	Urocanase
LL3_04083	SSF51338	Composite domain of metallo-dependent hydrolases
LL3_04083	SSF51556	Metallo-dependent hydrolases
LL3_04084	SSF52768	Arginase/deacetylase
LL3_04086	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
LL3_04086	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
LL3_04086	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
LL3_04088	SSF51569	Aldolase
LL3_04089	SSF100950	NagB/RpiA/CoA transferase-like
LL3_04089	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
LL3_04090	SSF56784	HAD-like
LL3_04092	SSF50814	Lipocalins
LL3_04096	SSF53807	"Helical backbone" metal receptor
LL3_04097	SSF159121	BC4932-like
LL3_04099	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04100	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_04101	SSF52172	CheY-like
LL3_04102	SSF51569	Aldolase
LL3_04103	SSF51658	Xylose isomerase-like
LL3_04104	SSF51658	Xylose isomerase-like
LL3_04105	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_04105	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
LL3_04106	SSF103473	MFS general substrate transporter
LL3_04107	SSF51658	Xylose isomerase-like
LL3_04108	SSF52467	DHS-like NAD/FAD-binding domain
LL3_04108	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
LL3_04109	SSF53613	Ribokinase-like
LL3_04110	SSF51182	RmlC-like cupins
LL3_04111	SSF53720	ALDH-like
LL3_04112	SSF100950	NagB/RpiA/CoA transferase-like
LL3_04112	SSF46785	"Winged helix" DNA-binding domain
LL3_04113	SSF51430	NAD(P)-linked oxidoreductase
LL3_04114	SSF103473	MFS general substrate transporter
LL3_04115	SSF110942	HSP90 C-terminal domain
LL3_04115	SSF54211	Ribosomal protein S5 domain 2-like
LL3_04115	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_04116	SSF51735	NAD(P)-binding Rossmann-fold domains
LL3_04117	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_04117	SSF52172	CheY-like
LL3_04118	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_04120	SSF46689	Homeodomain-like
LL3_04121	SSF53720	ALDH-like
LL3_04122	SSF50998	Quinoprotein alcohol dehydrogenase-like
LL3_04124	SSF46785	"Winged helix" DNA-binding domain
LL3_04125	SSF103473	MFS general substrate transporter
LL3_04127	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_04128	SSF52833	Thioredoxin-like
LL3_04129	SSF51905	FAD/NAD(P)-binding domain
LL3_04129	SSF52833	Thioredoxin-like
LL3_04130	SSF63829	Calcium-dependent phosphotriesterase
LL3_04132	SSF46785	"Winged helix" DNA-binding domain
LL3_04136	SSF53041	Resolvase-like
LL3_04142	SSF53901	Thiolase-like
LL3_04146	SSF56024	Phospholipase D/nuclease
LL3_04147	SSF56300	Metallo-dependent phosphatases
LL3_04148	SSF47741	CO dehydrogenase ISP C-domain like
LL3_04148	SSF54292	2Fe-2S ferredoxin-like
LL3_04149	SSF55447	CO dehydrogenase flavoprotein C-terminal domain-like
LL3_04149	SSF56176	FAD-binding/transporter-associated domain-like
LL3_04150	SSF54665	CO dehydrogenase molybdoprotein N-domain-like
LL3_04150	SSF56003	Molybdenum cofactor-binding domain
LL3_04151	SSF53448	Nucleotide-diphospho-sugar transferases
LL3_04155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04156	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04157	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04158	SSF75217	alpha/beta knot
LL3_04161	SSF50998	Quinoprotein alcohol dehydrogenase-like
LL3_04162	SSF54001	Cysteine proteinases
LL3_04163	SSF51430	NAD(P)-linked oxidoreductase
LL3_04164	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_04166	SSF48452	TPR-like
LL3_04167	SSF52768	Arginase/deacetylase
LL3_04169	SSF53383	PLP-dependent transferases
LL3_04171	SSF46785	"Winged helix" DNA-binding domain
LL3_04172	SSF46689	Homeodomain-like
LL3_04172	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04172	SSF55785	PYP-like sensor domain (PAS domain)
LL3_04173	SSF103473	MFS general substrate transporter
LL3_04175	SSF158472	HAMP domain-like
LL3_04175	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_04175	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_04176	SSF52172	CheY-like
LL3_04178	SSF50156	PDZ domain-like
LL3_04178	SSF50494	Trypsin-like serine proteases
LL3_04179	SSF56281	Metallo-hydrolase/oxidoreductase
LL3_04182	SSF103190	Sensory domain-like
LL3_04182	SSF158472	HAMP domain-like
LL3_04182	SSF47384	Homodimeric domain of signal transducing histidine kinase
LL3_04182	SSF55785	PYP-like sensor domain (PAS domain)
LL3_04182	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
LL3_04183	SSF46894	C-terminal effector domain of the bipartite response regulators
LL3_04183	SSF52172	CheY-like
LL3_04186	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04187	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_04189	SSF48024	N-terminal domain of DnaB helicase
LL3_04189	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04194	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_04195	SSF56112	Protein kinase-like (PK-like)
LL3_04196	SSF56059	Glutathione synthetase ATP-binding domain-like
LL3_04197	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
LL3_04198	SSF102588	LmbE-like
LL3_04199	SSF56112	Protein kinase-like (PK-like)
LL3_04200	SSF55653	Ribosomal protein L9 C-domain
LL3_04200	SSF55658	L9 N-domain-like
LL3_04201	SSF64182	DHH phosphoesterases
LL3_04205	SSF46785	"Winged helix" DNA-binding domain
LL3_04206	SSF64182	DHH phosphoesterases
LL3_04207	SSF103481	Multidrug resistance efflux transporter EmrE
LL3_04208	SSF75005	Arabinanase/levansucrase/invertase
LL3_04209	SSF49899	Concanavalin A-like lectins/glucanases
LL3_04209	SSF75005	Arabinanase/levansucrase/invertase
LL3_04210	SSF46785	"Winged helix" DNA-binding domain
LL3_04210	SSF48008	GntR ligand-binding domain-like
LL3_04211	SSF109854	DinB/YfiT-like putative metalloenzymes
LL3_04212	SSF103473	MFS general substrate transporter
LL3_04215	SSF55469	FMN-dependent nitroreductase-like
LL3_04216	SSF46785	"Winged helix" DNA-binding domain
LL3_04219	SSF46785	"Winged helix" DNA-binding domain
LL3_04220	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_04221	SSF53474	alpha/beta-Hydrolases
LL3_04228	SSF103473	MFS general substrate transporter
LL3_04229	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
LL3_04230	SSF47413	lambda repressor-like DNA-binding domains
LL3_04230	SSF53822	Periplasmic binding protein-like I
LL3_04231	SSF56219	DNase I-like
LL3_04232	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
LL3_04232	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
LL3_04233	SSF46689	Homeodomain-like
LL3_04233	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
LL3_04235	SSF50249	Nucleic acid-binding proteins
LL3_04236	SSF54995	Ribosomal protein S6
LL3_04237	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04237	SSF81271	TGS-like
LL3_04238	SSF50692	ADC-like
LL3_04238	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
LL3_04241	SSF55729	Acyl-CoA N-acyltransferases (Nat)
LL3_04242	SSF53163	HybD-like
LL3_04243	SSF109709	KorB DNA-binding domain-like
LL3_04243	SSF110849	ParB/Sulfiredoxin
LL3_04244	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04245	SSF109709	KorB DNA-binding domain-like
LL3_04245	SSF110849	ParB/Sulfiredoxin
LL3_04246	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
LL3_04247	SSF51905	FAD/NAD(P)-binding domain
LL3_04248	SSF116878	TrmE connector domain
LL3_04248	SSF52540	P-loop containing nucleoside triphosphate hydrolases
LL3_04249	SSF54814	Prokaryotic type KH domain (KH-domain type II)
LL3_04249	SSF82708	R3H domain
LL3_04251	SSF54211	Ribosomal protein S5 domain 2-like