BAA_0014	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BAA_0014	PWY-6596	adenosine nucleotides degradation I
BAA_0014	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BAA_0015	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_0015	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_0016	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
BAA_0017	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
BAA_0018	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
BAA_0039	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BAA_0039	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_0039	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_0039	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BAA_0039	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BAA_0039	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BAA_0054	PWY-7560	methylerythritol phosphate pathway II
BAA_0059	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BAA_0076	PWY-6599	guanine and guanosine salvage II
BAA_0076	PWY-6609	adenine and adenosine salvage III
BAA_0076	PWY-6610	adenine and adenosine salvage IV
BAA_0076	PWY-6620	guanine and guanosine salvage
BAA_0078	PWY-3961	phosphopantothenate biosynthesis II
BAA_0080	PWY-6936	seleno-amino acid biosynthesis
BAA_0081	PWY-5958	acridone alkaloid biosynthesis
BAA_0081	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BAA_0081	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BAA_0082	PWY-5958	acridone alkaloid biosynthesis
BAA_0082	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BAA_0082	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BAA_0084	PWY-6614	tetrahydrofolate biosynthesis
BAA_0085	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BAA_0085	PWY-6148	tetrahydromethanopterin biosynthesis
BAA_0085	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BAA_0085	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BAA_0086	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BAA_0086	PWY-6148	tetrahydromethanopterin biosynthesis
BAA_0086	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BAA_0086	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BAA_0101	PWY-7560	methylerythritol phosphate pathway II
BAA_0102	PWY-7560	methylerythritol phosphate pathway II
BAA_0103	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BAA_0104	PWY-6936	seleno-amino acid biosynthesis
BAA_0104	PWY-7274	D-cycloserine biosynthesis
BAA_0147	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BAA_0184	PWY-31	canavanine degradation
BAA_0184	PWY-4984	urea cycle
BAA_0184	PWY-6305	putrescine biosynthesis IV
BAA_0184	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BAA_0187	PWY-6749	CMP-legionaminate biosynthesis I
BAA_0189	PWY-6749	CMP-legionaminate biosynthesis I
BAA_0192	PWY-5530	sorbitol biosynthesis II
BAA_0193	PWY-4261	glycerol degradation I
BAA_0193	PWY-5530	sorbitol biosynthesis II
BAA_0199	PWY-6167	flavin biosynthesis II (archaea)
BAA_0199	PWY-6168	flavin biosynthesis III (fungi)
BAA_0211	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_0211	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_0231	PWY-3341	L-proline biosynthesis III
BAA_0231	PWY-4981	L-proline biosynthesis II (from arginine)
BAA_0231	PWY-6344	L-ornithine degradation II (Stickland reaction)
BAA_0271	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_0271	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_0272	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_0272	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_0273	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_0273	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_0277	PWY-6012	acyl carrier protein metabolism I
BAA_0277	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BAA_0279	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BAA_0311	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BAA_0343	PWY-6123	inosine-5'-phosphate biosynthesis I
BAA_0343	PWY-7234	inosine-5'-phosphate biosynthesis III
BAA_0345	PWY-6123	inosine-5'-phosphate biosynthesis I
BAA_0345	PWY-6124	inosine-5'-phosphate biosynthesis II
BAA_0345	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BAA_0345	PWY-7234	inosine-5'-phosphate biosynthesis III
BAA_0346	PWY-6123	inosine-5'-phosphate biosynthesis I
BAA_0346	PWY-6124	inosine-5'-phosphate biosynthesis II
BAA_0346	PWY-7234	inosine-5'-phosphate biosynthesis III
BAA_0347	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BAA_0347	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BAA_0347	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BAA_0348	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BAA_0348	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BAA_0348	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BAA_0349	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BAA_0349	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BAA_0349	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BAA_0350	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BAA_0350	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BAA_0350	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BAA_0350	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BAA_0351	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BAA_0351	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BAA_0351	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BAA_0352	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BAA_0352	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BAA_0353	PWY-6123	inosine-5'-phosphate biosynthesis I
BAA_0353	PWY-6124	inosine-5'-phosphate biosynthesis II
BAA_0353	PWY-7234	inosine-5'-phosphate biosynthesis III
BAA_0354	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BAA_0354	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BAA_0354	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BAA_0363	PWY-6853	ethylene biosynthesis II (microbes)
BAA_0377	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BAA_0379	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BAA_0379	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BAA_0379	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BAA_0390	PWY-6829	tRNA methylation (yeast)
BAA_0390	PWY-7285	methylwyosine biosynthesis
BAA_0390	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
BAA_0403	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
BAA_0404	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BAA_0404	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
BAA_0409	PWY-101	photosynthesis light reactions
BAA_0409	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
BAA_0420	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BAA_0420	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BAA_0433	PWY-7310	D-glucosaminate degradation
BAA_0439	PWY-6897	thiamin salvage II
BAA_0439	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
BAA_0439	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BAA_0440	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BAA_0440	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BAA_0440	PWY-6897	thiamin salvage II
BAA_0440	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BAA_0440	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BAA_0440	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
BAA_0440	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BAA_0449	PWY-6902	chitin degradation II
BAA_0483	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BAA_0483	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BAA_0488	PWY-5392	reductive TCA cycle II
BAA_0488	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_0488	PWY-5690	TCA cycle II (plants and fungi)
BAA_0488	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_0488	PWY-6728	methylaspartate cycle
BAA_0488	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_0488	PWY-7254	TCA cycle VII (acetate-producers)
BAA_0488	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BAA_0561	PWY-7310	D-glucosaminate degradation
BAA_0570	PWY-5480	pyruvate fermentation to ethanol I
BAA_0570	PWY-5485	pyruvate fermentation to acetate IV
BAA_0570	PWY-5493	reductive monocarboxylic acid cycle
BAA_0572	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_0572	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BAA_0572	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BAA_0572	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_0593	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BAA_0672	PWY-1881	formate oxidation to CO<sub>2</sub>
BAA_0672	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_0672	PWY-6696	oxalate degradation III
BAA_0680	PWY-5381	pyridine nucleotide cycling (plants)
BAA_0692	PWY-5392	reductive TCA cycle II
BAA_0692	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_0692	PWY-5690	TCA cycle II (plants and fungi)
BAA_0692	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_0692	PWY-6728	methylaspartate cycle
BAA_0692	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_0692	PWY-7254	TCA cycle VII (acetate-producers)
BAA_0692	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BAA_0713	PWY-7310	D-glucosaminate degradation
BAA_0754	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BAA_0754	PWY-5723	Rubisco shunt
BAA_0762	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BAA_0763	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_0763	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_0785	PWY-3781	aerobic respiration I (cytochrome c)
BAA_0785	PWY-4521	arsenite oxidation I (respiratory)
BAA_0785	PWY-6692	Fe(II) oxidation
BAA_0785	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BAA_0832	PWY-6899	base-degraded thiamin salvage
BAA_0832	PWY-7356	thiamin salvage IV (yeast)
BAA_0836	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BAA_0836	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BAA_0836	PWY-6897	thiamin salvage II
BAA_0836	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BAA_0836	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BAA_0836	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
BAA_0836	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BAA_0839	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_0839	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_0840	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_0840	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_0841	PWY-6910	hydroxymethylpyrimidine salvage
BAA_0841	PWY-7356	thiamin salvage IV (yeast)
BAA_0841	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BAA_0861	PWY-621	sucrose degradation III (sucrose invertase)
BAA_0862	PWY-7310	D-glucosaminate degradation
BAA_0878	PWY-6483	ceramide degradation
BAA_0878	PWY-7119	sphingolipid recycling and degradation (yeast)
BAA_0898	PWY-7310	D-glucosaminate degradation
BAA_0900	PWY-7310	D-glucosaminate degradation
BAA_0901	PWY-7310	D-glucosaminate degradation
BAA_0932	PWY-7310	D-glucosaminate degradation
BAA_0951	PWY-5506	methanol oxidation to formaldehyde IV
BAA_0955	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_0955	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_0972	PWY-5101	L-isoleucine biosynthesis II
BAA_0972	PWY-5103	L-isoleucine biosynthesis III
BAA_0972	PWY-5104	L-isoleucine biosynthesis IV
BAA_0972	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BAA_0972	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BAA_0972	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BAA_0972	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BAA_0973	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BAA_1057	PWY-5669	phosphatidylethanolamine biosynthesis I
BAA_1120	PWY-4261	glycerol degradation I
BAA_1121	PWY-4261	glycerol degradation I
BAA_1121	PWY-6118	glycerol-3-phosphate shuttle
BAA_1121	PWY-6952	glycerophosphodiester degradation
BAA_1159	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
BAA_1159	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BAA_1161	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
BAA_1161	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BAA_1177	PWY-6984	lipoate salvage II
BAA_1177	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BAA_1177	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BAA_1215	PWY-6728	methylaspartate cycle
BAA_1215	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_1215	PWY-7118	chitin degradation to ethanol
BAA_1215	PWY-7294	xylose degradation IV
BAA_1215	PWY-7295	L-arabinose degradation IV
BAA_1216	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_1236	PWY-3341	L-proline biosynthesis III
BAA_1236	PWY-4981	L-proline biosynthesis II (from arginine)
BAA_1236	PWY-6344	L-ornithine degradation II (Stickland reaction)
BAA_1236	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BAA_1241	PWY-5506	methanol oxidation to formaldehyde IV
BAA_1261	PWY-4381	fatty acid biosynthesis initiation I
BAA_1288	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BAA_1288	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BAA_1288	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BAA_1304	PWY-3221	dTDP-L-rhamnose biosynthesis II
BAA_1304	PWY-6808	dTDP-D-forosamine biosynthesis
BAA_1304	PWY-6942	dTDP-D-desosamine biosynthesis
BAA_1304	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BAA_1304	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
BAA_1304	PWY-6974	dTDP-L-olivose biosynthesis
BAA_1304	PWY-6976	dTDP-L-mycarose biosynthesis
BAA_1304	PWY-7104	dTDP-L-megosamine biosynthesis
BAA_1304	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
BAA_1304	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
BAA_1304	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
BAA_1304	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
BAA_1304	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
BAA_1304	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
BAA_1304	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
BAA_1304	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
BAA_1306	PWY-3221	dTDP-L-rhamnose biosynthesis II
BAA_1306	PWY-6808	dTDP-D-forosamine biosynthesis
BAA_1306	PWY-6942	dTDP-D-desosamine biosynthesis
BAA_1306	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BAA_1306	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
BAA_1306	PWY-6974	dTDP-L-olivose biosynthesis
BAA_1306	PWY-6976	dTDP-L-mycarose biosynthesis
BAA_1306	PWY-7104	dTDP-L-megosamine biosynthesis
BAA_1306	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
BAA_1306	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
BAA_1306	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
BAA_1306	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
BAA_1306	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
BAA_1306	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
BAA_1306	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
BAA_1306	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
BAA_1308	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BAA_1308	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BAA_1308	PWY-5989	stearate biosynthesis II (bacteria and plants)
BAA_1308	PWY-6113	superpathway of mycolate biosynthesis
BAA_1308	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BAA_1308	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BAA_1308	PWY-7096	triclosan resistance
BAA_1308	PWYG-321	mycolate biosynthesis
BAA_1324	PWY-5958	acridone alkaloid biosynthesis
BAA_1324	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BAA_1324	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BAA_1325	PWY-5958	acridone alkaloid biosynthesis
BAA_1325	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BAA_1325	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BAA_1343	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BAA_1344	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BAA_1357	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_1357	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_1376	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_1376	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_1397	PWY-5676	acetyl-CoA fermentation to butanoate II
BAA_1397	PWY-5741	ethylmalonyl-CoA pathway
BAA_1397	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BAA_1408	PWY-6832	2-aminoethylphosphonate degradation II
BAA_1427	PWY-6703	preQ<sub>0</sub> biosynthesis
BAA_1429	PWY-6703	preQ<sub>0</sub> biosynthesis
BAA_1430	PWY-6700	queuosine biosynthesis
BAA_1438	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BAA_1438	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_1438	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BAA_1438	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BAA_1438	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1438	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1438	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_1438	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BAA_1440	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BAA_1440	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_1440	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BAA_1440	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BAA_1440	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1440	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1440	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_1440	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BAA_1441	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BAA_1441	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_1441	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BAA_1441	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BAA_1441	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1441	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1441	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_1441	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BAA_1454	PWY-723	alkylnitronates degradation
BAA_1483	PWY-5057	L-valine degradation II
BAA_1483	PWY-5076	L-leucine degradation III
BAA_1483	PWY-5078	L-isoleucine degradation II
BAA_1483	PWY-5101	L-isoleucine biosynthesis II
BAA_1483	PWY-5103	L-isoleucine biosynthesis III
BAA_1483	PWY-5104	L-isoleucine biosynthesis IV
BAA_1483	PWY-5108	L-isoleucine biosynthesis V
BAA_1484	PWY-5101	L-isoleucine biosynthesis II
BAA_1484	PWY-5103	L-isoleucine biosynthesis III
BAA_1484	PWY-5104	L-isoleucine biosynthesis IV
BAA_1484	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BAA_1484	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BAA_1484	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BAA_1484	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BAA_1485	PWY-5101	L-isoleucine biosynthesis II
BAA_1485	PWY-5103	L-isoleucine biosynthesis III
BAA_1485	PWY-5104	L-isoleucine biosynthesis IV
BAA_1485	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BAA_1485	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BAA_1485	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BAA_1485	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BAA_1486	PWY-5101	L-isoleucine biosynthesis II
BAA_1486	PWY-5103	L-isoleucine biosynthesis III
BAA_1486	PWY-5104	L-isoleucine biosynthesis IV
BAA_1486	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BAA_1487	PWY-6871	3-methylbutanol biosynthesis
BAA_1488	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BAA_1503	PWY-5669	phosphatidylethanolamine biosynthesis I
BAA_1507	PWY-2941	L-lysine biosynthesis II
BAA_1507	PWY-2942	L-lysine biosynthesis III
BAA_1507	PWY-5097	L-lysine biosynthesis VI
BAA_1511	PWY-5278	sulfite oxidation III
BAA_1511	PWY-5340	sulfate activation for sulfonation
BAA_1511	PWY-6683	sulfate reduction III (assimilatory)
BAA_1511	PWY-6932	selenate reduction
BAA_1512	PWY-5340	sulfate activation for sulfonation
BAA_1513	PWY-6683	sulfate reduction III (assimilatory)
BAA_1515	PWY-5194	siroheme biosynthesis
BAA_1515	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BAA_1516	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BAA_1517	PWY-5194	siroheme biosynthesis
BAA_1517	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BAA_1551	PWY-4202	arsenate detoxification I (glutaredoxin)
BAA_1551	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BAA_1551	PWY-6608	guanosine nucleotides degradation III
BAA_1551	PWY-6609	adenine and adenosine salvage III
BAA_1551	PWY-6611	adenine and adenosine salvage V
BAA_1551	PWY-6620	guanine and guanosine salvage
BAA_1551	PWY-6627	salinosporamide A biosynthesis
BAA_1551	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
BAA_1551	PWY-7179	purine deoxyribonucleosides degradation I
BAA_1551	PWY-7179-1	purine deoxyribonucleosides degradation
BAA_1557	PWY-6854	ethylene biosynthesis III (microbes)
BAA_1558	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_1558	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_1567	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BAA_1567	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BAA_1567	PWY-6268	adenosylcobalamin salvage from cobalamin
BAA_1567	PWY-6269	adenosylcobalamin salvage from cobinamide II
BAA_1587	PWY-7205	CMP phosphorylation
BAA_1589	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
BAA_1589	PWY-6174	mevalonate pathway II (archaea)
BAA_1589	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
BAA_1589	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
BAA_1589	PWY-7102	bisabolene biosynthesis
BAA_1589	PWY-7391	isoprene biosynthesis II (engineered)
BAA_1589	PWY-7524	mevalonate pathway III (archaea)
BAA_1589	PWY-7560	methylerythritol phosphate pathway II
BAA_1589	PWY-922	mevalonate pathway I
BAA_1595	PWY-5667	CDP-diacylglycerol biosynthesis I
BAA_1595	PWY-5981	CDP-diacylglycerol biosynthesis III
BAA_1601	PWY-5663	tetrahydrobiopterin biosynthesis I
BAA_1601	PWY-5664	tetrahydrobiopterin biosynthesis II
BAA_1601	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BAA_1601	PWY-6703	preQ<sub>0</sub> biosynthesis
BAA_1601	PWY-6983	tetrahydrobiopterin biosynthesis III
BAA_1601	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BAA_1602	PWY-5807	heptaprenyl diphosphate biosynthesis
BAA_1603	PWY-5839	menaquinol-7 biosynthesis
BAA_1603	PWY-5844	menaquinol-9 biosynthesis
BAA_1603	PWY-5849	menaquinol-6 biosynthesis
BAA_1603	PWY-5890	menaquinol-10 biosynthesis
BAA_1603	PWY-5891	menaquinol-11 biosynthesis
BAA_1603	PWY-5892	menaquinol-12 biosynthesis
BAA_1603	PWY-5895	menaquinol-13 biosynthesis
BAA_1604	PWY-5807	heptaprenyl diphosphate biosynthesis
BAA_1605	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BAA_1605	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BAA_1605	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_1605	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1605	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BAA_1605	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BAA_1605	PWY-7205	CMP phosphorylation
BAA_1605	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BAA_1605	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1605	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BAA_1605	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_1605	PWY-7224	purine deoxyribonucleosides salvage
BAA_1605	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_1605	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BAA_1606	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BAA_1607	PWY-6164	3-dehydroquinate biosynthesis I
BAA_1622	PWY-2941	L-lysine biosynthesis II
BAA_1622	PWY-2942	L-lysine biosynthesis III
BAA_1622	PWY-5097	L-lysine biosynthesis VI
BAA_1627	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BAA_1627	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BAA_1629	PWY-6654	phosphopantothenate biosynthesis III
BAA_1631	PWY-5155	&beta;-alanine biosynthesis III
BAA_1755	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BAA_1840	PWY-5392	reductive TCA cycle II
BAA_1840	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_1840	PWY-5690	TCA cycle II (plants and fungi)
BAA_1840	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_1840	PWY-6728	methylaspartate cycle
BAA_1840	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_1840	PWY-7254	TCA cycle VII (acetate-producers)
BAA_1840	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BAA_1870	PWY-5392	reductive TCA cycle II
BAA_1870	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_1870	PWY-5690	TCA cycle II (plants and fungi)
BAA_1870	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_1870	PWY-6728	methylaspartate cycle
BAA_1870	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_1870	PWY-7254	TCA cycle VII (acetate-producers)
BAA_1870	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BAA_1880	PWY-2941	L-lysine biosynthesis II
BAA_1880	PWY-2942	L-lysine biosynthesis III
BAA_1880	PWY-5097	L-lysine biosynthesis VI
BAA_1880	PWY-6559	spermidine biosynthesis II
BAA_1880	PWY-6562	norspermidine biosynthesis
BAA_1880	PWY-7153	grixazone biosynthesis
BAA_1896	PWY-4381	fatty acid biosynthesis initiation I
BAA_1902	PWY-6936	seleno-amino acid biosynthesis
BAA_1918	PWY-5057	L-valine degradation II
BAA_1918	PWY-5076	L-leucine degradation III
BAA_1918	PWY-5078	L-isoleucine degradation II
BAA_1918	PWY-5101	L-isoleucine biosynthesis II
BAA_1918	PWY-5103	L-isoleucine biosynthesis III
BAA_1918	PWY-5104	L-isoleucine biosynthesis IV
BAA_1918	PWY-5108	L-isoleucine biosynthesis V
BAA_1919	PWY-5101	L-isoleucine biosynthesis II
BAA_1919	PWY-5103	L-isoleucine biosynthesis III
BAA_1919	PWY-5104	L-isoleucine biosynthesis IV
BAA_1919	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BAA_1919	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BAA_1919	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BAA_1919	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BAA_1921	PWY-5101	L-isoleucine biosynthesis II
BAA_1921	PWY-5103	L-isoleucine biosynthesis III
BAA_1921	PWY-5104	L-isoleucine biosynthesis IV
BAA_1921	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BAA_1922	PWY-5101	L-isoleucine biosynthesis II
BAA_1922	PWY-5103	L-isoleucine biosynthesis III
BAA_1922	PWY-5104	L-isoleucine biosynthesis IV
BAA_1922	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BAA_1950	PWY-6654	phosphopantothenate biosynthesis III
BAA_1960	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
BAA_1962	PWY-7181	pyrimidine deoxyribonucleosides degradation
BAA_1963	PWY-6556	pyrimidine ribonucleosides salvage II
BAA_1963	PWY-7181	pyrimidine deoxyribonucleosides degradation
BAA_1963	PWY-7193	pyrimidine ribonucleosides salvage I
BAA_1963	PWY-7199	pyrimidine deoxyribonucleosides salvage
BAA_1991	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BAA_1993	PWY-5481	pyruvate fermentation to lactate
BAA_1993	PWY-6901	superpathway of glucose and xylose degradation
BAA_1998	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BAA_1998	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BAA_2000	PWY-4381	fatty acid biosynthesis initiation I
BAA_2035	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BAA_2035	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BAA_2038	PWY-702	L-methionine biosynthesis II
BAA_2093	PWY-0	putrescine degradation III
BAA_2093	PWY-6117	spermine and spermidine degradation I
BAA_2138	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BAA_2145	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BAA_2173	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
BAA_2173	PWY-2161	folate polyglutamylation
BAA_2173	PWY-2201	folate transformations I
BAA_2173	PWY-3841	folate transformations II
BAA_2199	PWY-6823	molybdenum cofactor biosynthesis
BAA_2201	PWY-6823	molybdenum cofactor biosynthesis
BAA_2202	PWY-6823	molybdenum cofactor biosynthesis
BAA_2207	PWY-5194	siroheme biosynthesis
BAA_2207	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BAA_2208	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BAA_2209	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BAA_2209	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BAA_2209	PWY-5194	siroheme biosynthesis
BAA_2209	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BAA_2211	PWY-6683	sulfate reduction III (assimilatory)
BAA_2217	PWY-7153	grixazone biosynthesis
BAA_2285	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_2285	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_2300	PWY-3841	folate transformations II
BAA_2300	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_2300	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_2300	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BAA_2300	PWY-7199	pyrimidine deoxyribonucleosides salvage
BAA_2300	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BAA_2301	PWY-3841	folate transformations II
BAA_2301	PWY-6614	tetrahydrofolate biosynthesis
BAA_2304	PWY-5667	CDP-diacylglycerol biosynthesis I
BAA_2304	PWY-5981	CDP-diacylglycerol biosynthesis III
BAA_2304	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
BAA_2304	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
BAA_2408	PWY-5747	2-methylcitrate cycle II
BAA_2412	PWY-5642	2,4-dinitrotoluene degradation
BAA_2412	PWY-6373	acrylate degradation
BAA_2426	PWY-5901	2,3-dihydroxybenzoate biosynthesis
BAA_2427	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BAA_2427	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BAA_2427	PWY-5901	2,3-dihydroxybenzoate biosynthesis
BAA_2427	PWY-6406	salicylate biosynthesis I
BAA_2429	PWY-5901	2,3-dihydroxybenzoate biosynthesis
BAA_2433	PWY-6012	acyl carrier protein metabolism I
BAA_2433	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BAA_2477	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
BAA_2477	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BAA_2494	PWY-2941	L-lysine biosynthesis II
BAA_2494	PWY-2942	L-lysine biosynthesis III
BAA_2494	PWY-5097	L-lysine biosynthesis VI
BAA_2494	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_2494	PWY-6559	spermidine biosynthesis II
BAA_2494	PWY-6562	norspermidine biosynthesis
BAA_2494	PWY-7153	grixazone biosynthesis
BAA_2494	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_2519	PWY-7310	D-glucosaminate degradation
BAA_2520	PWY-7310	D-glucosaminate degradation
BAA_2544	PWY-1622	formaldehyde assimilation I (serine pathway)
BAA_2544	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_2569	PWY-5642	2,4-dinitrotoluene degradation
BAA_2569	PWY-6373	acrylate degradation
BAA_2575	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BAA_2611	PWY-4381	fatty acid biosynthesis initiation I
BAA_2611	PWY-5743	3-hydroxypropanoate cycle
BAA_2611	PWY-5744	glyoxylate assimilation
BAA_2611	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BAA_2611	PWY-6679	jadomycin biosynthesis
BAA_2611	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BAA_2623	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BAA_2623	PWY-6153	autoinducer AI-2 biosynthesis I
BAA_2623	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
BAA_2673	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_2673	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_2675	PWY-6899	base-degraded thiamin salvage
BAA_2675	PWY-7356	thiamin salvage IV (yeast)
BAA_2699	PWY-5331	taurine biosynthesis
BAA_2705	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_2705	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_2737	PWY-6788	cellulose degradation II (fungi)
BAA_2781	PWY-7153	grixazone biosynthesis
BAA_2793	PWY-842	starch degradation I
BAA_2816	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BAA_2816	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BAA_2817	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BAA_2817	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BAA_2820	PWY-7153	grixazone biosynthesis
BAA_2836	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BAA_2836	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BAA_2854	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BAA_2854	PWY-5723	Rubisco shunt
BAA_2894	PWY-2941	L-lysine biosynthesis II
BAA_2894	PWY-2942	L-lysine biosynthesis III
BAA_2894	PWY-5097	L-lysine biosynthesis VI
BAA_2897	PWY-4261	glycerol degradation I
BAA_2897	PWY-6118	glycerol-3-phosphate shuttle
BAA_2897	PWY-6952	glycerophosphodiester degradation
BAA_2926	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BAA_2926	PWY-6153	autoinducer AI-2 biosynthesis I
BAA_2926	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
BAA_2956	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BAA_2956	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BAA_2956	PWY-5989	stearate biosynthesis II (bacteria and plants)
BAA_2956	PWY-5994	palmitate biosynthesis I (animals and fungi)
BAA_2956	PWY-6113	superpathway of mycolate biosynthesis
BAA_2956	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BAA_2956	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BAA_2956	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BAA_2956	PWYG-321	mycolate biosynthesis
BAA_2957	PWY-3961	phosphopantothenate biosynthesis II
BAA_3008	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BAA_3011	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BAA_3012	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BAA_3012	PWY-3461	L-tyrosine biosynthesis II
BAA_3012	PWY-3462	L-phenylalanine biosynthesis II
BAA_3012	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BAA_3012	PWY-6120	L-tyrosine biosynthesis III
BAA_3012	PWY-6164	3-dehydroquinate biosynthesis I
BAA_3012	PWY-6627	salinosporamide A biosynthesis
BAA_3026	PWY-7254	TCA cycle VII (acetate-producers)
BAA_3048	PWY-3341	L-proline biosynthesis III
BAA_3048	PWY-4981	L-proline biosynthesis II (from arginine)
BAA_3048	PWY-6344	L-ornithine degradation II (Stickland reaction)
BAA_3054	PWY-5491	diethylphosphate degradation
BAA_3080	PWY-5506	methanol oxidation to formaldehyde IV
BAA_3082	PWY-6610	adenine and adenosine salvage IV
BAA_3181	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_3181	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_3183	PWY-5392	reductive TCA cycle II
BAA_3183	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_3183	PWY-5690	TCA cycle II (plants and fungi)
BAA_3183	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_3183	PWY-6728	methylaspartate cycle
BAA_3183	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_3183	PWY-7254	TCA cycle VII (acetate-producers)
BAA_3183	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BAA_3190	PWY-3341	L-proline biosynthesis III
BAA_3190	PWY-4981	L-proline biosynthesis II (from arginine)
BAA_3190	PWY-6344	L-ornithine degradation II (Stickland reaction)
BAA_3214	PWY-5506	methanol oxidation to formaldehyde IV
BAA_3231	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BAA_3231	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_3231	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BAA_3231	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BAA_3236	PWY-5839	menaquinol-7 biosynthesis
BAA_3236	PWY-5851	demethylmenaquinol-9 biosynthesis
BAA_3236	PWY-5852	demethylmenaquinol-8 biosynthesis I
BAA_3236	PWY-5853	demethylmenaquinol-6 biosynthesis I
BAA_3236	PWY-5890	menaquinol-10 biosynthesis
BAA_3236	PWY-5891	menaquinol-11 biosynthesis
BAA_3236	PWY-5892	menaquinol-12 biosynthesis
BAA_3236	PWY-5895	menaquinol-13 biosynthesis
BAA_3269	PWY-5451	acetone degradation I (to methylglyoxal)
BAA_3269	PWY-5665	vanillin biosynthesis I
BAA_3269	PWY-6398	melatonin degradation I
BAA_3269	PWY-6992	1,5-anhydrofructose degradation
BAA_3269	PWY-7466	acetone degradation III (to propane-1,2-diol)
BAA_3294	PWY-4381	fatty acid biosynthesis initiation I
BAA_3335	PWY-0	putrescine degradation III
BAA_3335	PWY-6117	spermine and spermidine degradation I
BAA_3347	PWY-6409	pyoverdine I biosynthesis
BAA_3347	PWY-6562	norspermidine biosynthesis
BAA_3347	PWY-761	rhizobactin 1021 biosynthesis
BAA_3417	PWY-1042	glycolysis IV (plant cytosol)
BAA_3417	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BAA_3417	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_3417	PWY-5723	Rubisco shunt
BAA_3417	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_3417	PWY-6886	1-butanol autotrophic biosynthesis
BAA_3417	PWY-6901	superpathway of glucose and xylose degradation
BAA_3417	PWY-7003	glycerol degradation to butanol
BAA_3417	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BAA_3417	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BAA_3442	PWY-7560	methylerythritol phosphate pathway II
BAA_3462	PWY-4261	glycerol degradation I
BAA_3462	PWY-5530	sorbitol biosynthesis II
BAA_3464	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BAA_3464	PWY-5723	Rubisco shunt
BAA_3466	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BAA_3466	PWY-5723	Rubisco shunt
BAA_3466	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_3466	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_3466	PWY-6901	superpathway of glucose and xylose degradation
BAA_3466	PWY-7560	methylerythritol phosphate pathway II
BAA_3467	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BAA_3468	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BAA_3581	PWY-842	starch degradation I
BAA_3582	PWY-7153	grixazone biosynthesis
BAA_3604	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_3604	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_3633	PWY-4983	L-citrulline-nitric oxide cycle
BAA_3633	PWY-4984	urea cycle
BAA_3633	PWY-5	canavanine biosynthesis
BAA_3633	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_3633	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_3649	PWY-6823	molybdenum cofactor biosynthesis
BAA_3650	PWY-6823	molybdenum cofactor biosynthesis
BAA_3653	PWY-6823	molybdenum cofactor biosynthesis
BAA_3657	PWY-1881	formate oxidation to CO<sub>2</sub>
BAA_3657	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_3657	PWY-6696	oxalate degradation III
BAA_3692	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_3692	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_3692	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_3737	PWY-5028	L-histidine degradation II
BAA_3737	PWY-5030	L-histidine degradation III
BAA_3738	PWY-5028	L-histidine degradation II
BAA_3738	PWY-5030	L-histidine degradation III
BAA_3739	PWY-5028	L-histidine degradation II
BAA_3739	PWY-5030	L-histidine degradation III
BAA_3769	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BAA_3769	PWY-5723	Rubisco shunt
BAA_3769	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_3769	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_3769	PWY-6901	superpathway of glucose and xylose degradation
BAA_3769	PWY-7560	methylerythritol phosphate pathway II
BAA_3835	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BAA_3856	PWY-381	nitrate reduction II (assimilatory)
BAA_3856	PWY-5675	nitrate reduction V (assimilatory)
BAA_3856	PWY-6549	L-glutamine biosynthesis III
BAA_3856	PWY-6963	ammonia assimilation cycle I
BAA_3856	PWY-6964	ammonia assimilation cycle II
BAA_3866	PWY-2781	<i>cis</i>-zeatin biosynthesis
BAA_3869	PWY-7310	D-glucosaminate degradation
BAA_3878	PWY-6902	chitin degradation II
BAA_3936	PWY-7533	gliotoxin biosynthesis
BAA_3943	PWY-5269	cardiolipin biosynthesis II
BAA_3943	PWY-5668	cardiolipin biosynthesis I
BAA_3961	PWY-2941	L-lysine biosynthesis II
BAA_3961	PWY-2942	L-lysine biosynthesis III
BAA_3961	PWY-5097	L-lysine biosynthesis VI
BAA_3962	PWY-2941	L-lysine biosynthesis II
BAA_3962	PWY-2942	L-lysine biosynthesis III
BAA_3962	PWY-5097	L-lysine biosynthesis VI
BAA_3962	PWY-6559	spermidine biosynthesis II
BAA_3962	PWY-6562	norspermidine biosynthesis
BAA_3962	PWY-7153	grixazone biosynthesis
BAA_3963	PWY-2941	L-lysine biosynthesis II
BAA_3963	PWY-2942	L-lysine biosynthesis III
BAA_3963	PWY-5097	L-lysine biosynthesis VI
BAA_3963	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_3963	PWY-6559	spermidine biosynthesis II
BAA_3963	PWY-6562	norspermidine biosynthesis
BAA_3963	PWY-7153	grixazone biosynthesis
BAA_3963	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_3970	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
BAA_3970	PWY-6167	flavin biosynthesis II (archaea)
BAA_3970	PWY-6168	flavin biosynthesis III (fungi)
BAA_3982	PWY-7560	methylerythritol phosphate pathway II
BAA_3996	PWY-5392	reductive TCA cycle II
BAA_3996	PWY-5537	pyruvate fermentation to acetate V
BAA_3996	PWY-5538	pyruvate fermentation to acetate VI
BAA_3996	PWY-5690	TCA cycle II (plants and fungi)
BAA_3996	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_3996	PWY-6728	methylaspartate cycle
BAA_3996	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_3996	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BAA_3997	PWY-5392	reductive TCA cycle II
BAA_3997	PWY-5537	pyruvate fermentation to acetate V
BAA_3997	PWY-5538	pyruvate fermentation to acetate VI
BAA_3997	PWY-5690	TCA cycle II (plants and fungi)
BAA_3997	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_3997	PWY-6728	methylaspartate cycle
BAA_3997	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_3997	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BAA_4003	PWY-6829	tRNA methylation (yeast)
BAA_4003	PWY-7285	methylwyosine biosynthesis
BAA_4003	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
BAA_4013	PWY-5367	petroselinate biosynthesis
BAA_4013	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BAA_4013	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BAA_4013	PWY-5989	stearate biosynthesis II (bacteria and plants)
BAA_4013	PWY-5994	palmitate biosynthesis I (animals and fungi)
BAA_4013	PWY-6113	superpathway of mycolate biosynthesis
BAA_4013	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BAA_4013	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BAA_4013	PWY-6951	BAA_4013
BAA_4013	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
BAA_4013	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BAA_4013	PWYG-321	mycolate biosynthesis
BAA_4014	PWY-4381	fatty acid biosynthesis initiation I
BAA_4014	PWY-6799	fatty acid biosynthesis (plant mitochondria)
BAA_4014	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BAA_4021	PWY-6898	thiamin salvage III
BAA_4021	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BAA_4021	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BAA_4022	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BAA_4022	PWY-5723	Rubisco shunt
BAA_4033	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BAA_4044	PWY-5686	UMP biosynthesis
BAA_4045	PWY-5686	UMP biosynthesis
BAA_4048	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_4048	PWY-5686	UMP biosynthesis
BAA_4048	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_4049	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_4049	PWY-5686	UMP biosynthesis
BAA_4049	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_4050	PWY-5686	UMP biosynthesis
BAA_4051	PWY-5686	UMP biosynthesis
BAA_4055	PWY-7183	pyrimidine nucleobases salvage I
BAA_4065	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BAA_4074	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_4074	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_4075	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_4075	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BAA_4075	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BAA_4075	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_4077	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_4077	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_4078	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_4078	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BAA_4078	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_4085	PWY-6654	phosphopantothenate biosynthesis III
BAA_4136	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BAA_4136	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BAA_4136	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BAA_4136	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
BAA_4174	PWY-7142	cyanide detoxification II
BAA_4176	PWY-3781	aerobic respiration I (cytochrome c)
BAA_4176	PWY-4521	arsenite oxidation I (respiratory)
BAA_4176	PWY-6692	Fe(II) oxidation
BAA_4176	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BAA_4178	PWY-3781	aerobic respiration I (cytochrome c)
BAA_4178	PWY-4521	arsenite oxidation I (respiratory)
BAA_4178	PWY-6692	Fe(II) oxidation
BAA_4178	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BAA_4182	PWY-5750	itaconate biosynthesis
BAA_4182	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_4182	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
BAA_4187	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BAA_4187	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BAA_4204	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BAA_4204	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BAA_4215	PWY-2941	L-lysine biosynthesis II
BAA_4216	PWY-2941	L-lysine biosynthesis II
BAA_4241	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BAA_4241	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BAA_4241	PWY-6936	seleno-amino acid biosynthesis
BAA_4241	PWY-702	L-methionine biosynthesis II
BAA_4272	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BAA_4272	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
BAA_4273	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
BAA_4278	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BAA_4278	PWY-5532	adenosine nucleotides degradation IV
BAA_4278	PWY-5723	Rubisco shunt
BAA_4279	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BAA_4280	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BAA_4281	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BAA_4281	PWY-5389	3-methylthiopropanoate biosynthesis
BAA_4292	PWY-7310	D-glucosaminate degradation
BAA_4296	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BAA_4296	PWY-6855	chitin degradation I (archaea)
BAA_4296	PWY-6906	chitin derivatives degradation
BAA_4297	PWY-6906	chitin derivatives degradation
BAA_4297	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
BAA_4297	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
BAA_4319	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_4319	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_4328	PWY-7181	pyrimidine deoxyribonucleosides degradation
BAA_4329	PWY-4202	arsenate detoxification I (glutaredoxin)
BAA_4329	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BAA_4329	PWY-6608	guanosine nucleotides degradation III
BAA_4329	PWY-6609	adenine and adenosine salvage III
BAA_4329	PWY-6611	adenine and adenosine salvage V
BAA_4329	PWY-6620	guanine and guanosine salvage
BAA_4329	PWY-6627	salinosporamide A biosynthesis
BAA_4329	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
BAA_4329	PWY-7179	purine deoxyribonucleosides degradation I
BAA_4329	PWY-7179-1	purine deoxyribonucleosides degradation
BAA_4330	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
BAA_4354	PWY-6167	flavin biosynthesis II (archaea)
BAA_4354	PWY-6168	flavin biosynthesis III (fungi)
BAA_4354	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BAA_4355	PWY-6167	flavin biosynthesis II (archaea)
BAA_4355	PWY-6168	flavin biosynthesis III (fungi)
BAA_4355	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BAA_4357	PWY-6167	flavin biosynthesis II (archaea)
BAA_4357	PWY-6168	flavin biosynthesis III (fungi)
BAA_4358	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
BAA_4359	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BAA_4361	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BAA_4361	PWY-6578	8-amino-7-oxononanoate biosynthesis III
BAA_4361	PWY-7147	8-amino-7-oxononanoate biosynthesis II
BAA_4362	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
BAA_4372	PWY-4981	L-proline biosynthesis II (from arginine)
BAA_4372	PWY-4984	urea cycle
BAA_4372	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_4374	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_4374	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_4375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_4376	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_4376	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_4381	PWY-3341	L-proline biosynthesis III
BAA_4381	PWY-4981	L-proline biosynthesis II (from arginine)
BAA_4381	PWY-6344	L-ornithine degradation II (Stickland reaction)
BAA_4404	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BAA_4404	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BAA_4405	PWY-5482	pyruvate fermentation to acetate II
BAA_4405	PWY-5485	pyruvate fermentation to acetate IV
BAA_4405	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_4407	PWY-1281	sulfoacetaldehyde degradation I
BAA_4407	PWY-5482	pyruvate fermentation to acetate II
BAA_4407	PWY-5485	pyruvate fermentation to acetate IV
BAA_4407	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_4407	PWY-6637	sulfolactate degradation II
BAA_4418	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_4418	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_4418	PWY-7560	methylerythritol phosphate pathway II
BAA_4422	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
BAA_4422	PWY-2201	folate transformations I
BAA_4422	PWY-3841	folate transformations II
BAA_4422	PWY-5030	L-histidine degradation III
BAA_4422	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_4422	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BAA_4439	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BAA_4439	PWY-6416	quinate degradation II
BAA_4439	PWY-6707	gallate biosynthesis
BAA_4448	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BAA_4448	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BAA_4475	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BAA_4494	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_4494	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BAA_4494	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BAA_4494	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_4495	PWY-2201	folate transformations I
BAA_4495	PWY-3841	folate transformations II
BAA_4496	PWY-2201	folate transformations I
BAA_4496	PWY-3841	folate transformations II
BAA_4506	PWY-2723	trehalose degradation V
BAA_4506	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BAA_4506	PWY-5661	GDP-glucose biosynthesis
BAA_4506	PWY-7238	sucrose biosynthesis II
BAA_4506	PWY-7385	1,3-propanediol biosynthesis (engineered)
BAA_4510	PWY-6749	CMP-legionaminate biosynthesis I
BAA_4518	PWY-6854	ethylene biosynthesis III (microbes)
BAA_4522	PWY-7560	methylerythritol phosphate pathway II
BAA_4532	PWY-7560	methylerythritol phosphate pathway II
BAA_4533	PWY-5663	tetrahydrobiopterin biosynthesis I
BAA_4533	PWY-5664	tetrahydrobiopterin biosynthesis II
BAA_4533	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BAA_4533	PWY-6703	preQ<sub>0</sub> biosynthesis
BAA_4533	PWY-6983	tetrahydrobiopterin biosynthesis III
BAA_4533	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BAA_4545	PWY-6556	pyrimidine ribonucleosides salvage II
BAA_4545	PWY-7181	pyrimidine deoxyribonucleosides degradation
BAA_4545	PWY-7193	pyrimidine ribonucleosides salvage I
BAA_4545	PWY-7199	pyrimidine deoxyribonucleosides salvage
BAA_4546	PWY-7039	phosphatidate metabolism, as a signaling molecule
BAA_4573	PWY-3341	L-proline biosynthesis III
BAA_4573	PWY-4981	L-proline biosynthesis II (from arginine)
BAA_4573	PWY-6344	L-ornithine degradation II (Stickland reaction)
BAA_4577	PWY-5381	pyridine nucleotide cycling (plants)
BAA_4577	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BAA_4579	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BAA_4583	PWY-5669	phosphatidylethanolamine biosynthesis I
BAA_4593	PWY-5491	diethylphosphate degradation
BAA_4606	PWY-7158	L-phenylalanine degradation V
BAA_4619	PWY-3162	L-tryptophan degradation V (side chain pathway)
BAA_4619	PWY-5057	L-valine degradation II
BAA_4619	PWY-5076	L-leucine degradation III
BAA_4619	PWY-5078	L-isoleucine degradation II
BAA_4619	PWY-5079	L-phenylalanine degradation III
BAA_4619	PWY-5082	L-methionine degradation III
BAA_4619	PWY-5162	2-oxopentenoate degradation
BAA_4619	PWY-5436	L-threonine degradation IV
BAA_4619	PWY-5480	pyruvate fermentation to ethanol I
BAA_4619	PWY-5486	pyruvate fermentation to ethanol II
BAA_4619	PWY-5751	phenylethanol biosynthesis
BAA_4619	PWY-6028	acetoin degradation
BAA_4619	PWY-6313	serotonin degradation
BAA_4619	PWY-6333	acetaldehyde biosynthesis I
BAA_4619	PWY-6342	noradrenaline and adrenaline degradation
BAA_4619	PWY-6587	pyruvate fermentation to ethanol III
BAA_4619	PWY-6802	salidroside biosynthesis
BAA_4619	PWY-6871	3-methylbutanol biosynthesis
BAA_4619	PWY-7013	L-1,2-propanediol degradation
BAA_4619	PWY-7085	triethylamine degradation
BAA_4619	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BAA_4619	PWY-7118	chitin degradation to ethanol
BAA_4619	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
BAA_4619	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BAA_4619	PWY-7557	dehydrodiconiferyl alcohol degradation
BAA_4622	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BAA_4622	PWY-6153	autoinducer AI-2 biosynthesis I
BAA_4622	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
BAA_4628	PWY-7193	pyrimidine ribonucleosides salvage I
BAA_4645	PWY-6823	molybdenum cofactor biosynthesis
BAA_4645	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_4645	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_4645	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BAA_4655	PWY-6605	adenine and adenosine salvage II
BAA_4655	PWY-6610	adenine and adenosine salvage IV
BAA_4664	PWY-6700	queuosine biosynthesis
BAA_4665	PWY-6700	queuosine biosynthesis
BAA_4677	PWY-5316	nicotine biosynthesis
BAA_4677	PWY-7342	superpathway of nicotine biosynthesis
BAA_4678	PWY-5316	nicotine biosynthesis
BAA_4678	PWY-5381	pyridine nucleotide cycling (plants)
BAA_4678	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BAA_4678	PWY-7342	superpathway of nicotine biosynthesis
BAA_4679	PWY-5316	nicotine biosynthesis
BAA_4679	PWY-7342	superpathway of nicotine biosynthesis
BAA_4680	PWY-6823	molybdenum cofactor biosynthesis
BAA_4680	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_4680	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_4680	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BAA_4683	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
BAA_4707	PWY-2161	folate polyglutamylation
BAA_4711	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BAA_4712	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BAA_4712	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BAA_4713	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BAA_4713	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BAA_4714	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BAA_4714	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BAA_4716	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BAA_4731	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
BAA_4734	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_4734	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_4768	PWY-3781	aerobic respiration I (cytochrome c)
BAA_4768	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BAA_4768	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_4768	PWY-5690	TCA cycle II (plants and fungi)
BAA_4768	PWY-6728	methylaspartate cycle
BAA_4768	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_4768	PWY-7254	TCA cycle VII (acetate-producers)
BAA_4768	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BAA_4769	PWY-3781	aerobic respiration I (cytochrome c)
BAA_4769	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BAA_4769	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_4769	PWY-5690	TCA cycle II (plants and fungi)
BAA_4769	PWY-6728	methylaspartate cycle
BAA_4769	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_4769	PWY-7254	TCA cycle VII (acetate-producers)
BAA_4769	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BAA_4836	PWY-6834	spermidine biosynthesis III
BAA_4838	PWY-1042	glycolysis IV (plant cytosol)
BAA_4838	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_4838	PWY-6901	superpathway of glucose and xylose degradation
BAA_4838	PWY-7003	glycerol degradation to butanol
BAA_4848	PWY-1622	formaldehyde assimilation I (serine pathway)
BAA_4848	PWY-5392	reductive TCA cycle II
BAA_4848	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_4848	PWY-5690	TCA cycle II (plants and fungi)
BAA_4848	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_4848	PWY-6728	methylaspartate cycle
BAA_4848	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_4848	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BAA_4848	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BAA_4849	PWY-5913	TCA cycle VI (obligate autotrophs)
BAA_4849	PWY-6549	L-glutamine biosynthesis III
BAA_4849	PWY-6728	methylaspartate cycle
BAA_4849	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BAA_4849	PWY-7124	ethylene biosynthesis V (engineered)
BAA_4849	PWY-7254	TCA cycle VII (acetate-producers)
BAA_4849	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BAA_4854	PWY-1042	glycolysis IV (plant cytosol)
BAA_4854	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BAA_4854	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_4854	PWY-5723	Rubisco shunt
BAA_4854	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_4854	PWY-6886	1-butanol autotrophic biosynthesis
BAA_4854	PWY-6901	superpathway of glucose and xylose degradation
BAA_4854	PWY-7003	glycerol degradation to butanol
BAA_4854	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BAA_4854	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BAA_4855	PWY-1042	glycolysis IV (plant cytosol)
BAA_4855	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BAA_4855	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_4855	PWY-7385	1,3-propanediol biosynthesis (engineered)
BAA_4856	PWY-4381	fatty acid biosynthesis initiation I
BAA_4856	PWY-5743	3-hydroxypropanoate cycle
BAA_4856	PWY-5744	glyoxylate assimilation
BAA_4856	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BAA_4856	PWY-6679	jadomycin biosynthesis
BAA_4856	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BAA_4857	PWY-4381	fatty acid biosynthesis initiation I
BAA_4857	PWY-5743	3-hydroxypropanoate cycle
BAA_4857	PWY-5744	glyoxylate assimilation
BAA_4857	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BAA_4857	PWY-6679	jadomycin biosynthesis
BAA_4857	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BAA_4869	PWY-1281	sulfoacetaldehyde degradation I
BAA_4869	PWY-5482	pyruvate fermentation to acetate II
BAA_4869	PWY-5485	pyruvate fermentation to acetate IV
BAA_4869	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_4869	PWY-6637	sulfolactate degradation II
BAA_4890	PWY-4983	L-citrulline-nitric oxide cycle
BAA_4890	PWY-4984	urea cycle
BAA_4890	PWY-5	canavanine biosynthesis
BAA_4890	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_4890	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_4891	PWY-4983	L-citrulline-nitric oxide cycle
BAA_4891	PWY-4984	urea cycle
BAA_4891	PWY-5	canavanine biosynthesis
BAA_4891	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BAA_4891	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BAA_4899	PWY-5482	pyruvate fermentation to acetate II
BAA_4899	PWY-5485	pyruvate fermentation to acetate IV
BAA_4899	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_4904	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BAA_4904	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BAA_4904	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BAA_4910	PWY-6823	molybdenum cofactor biosynthesis
BAA_4910	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_4910	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_4910	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BAA_4948	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_4948	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_4949	PWY-5381	pyridine nucleotide cycling (plants)
BAA_4962	PWY-842	starch degradation I
BAA_4982	PWY-6823	molybdenum cofactor biosynthesis
BAA_4984	PWY-6823	molybdenum cofactor biosynthesis
BAA_4988	PWY-6823	molybdenum cofactor biosynthesis
BAA_4994	PWY-5344	L-homocysteine biosynthesis
BAA_5018	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_5018	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_5027	PWY-5964	guanylyl molybdenum cofactor biosynthesis
BAA_5031	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BAA_5031	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
BAA_5034	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BAA_5034	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BAA_5039	PWY-5663	tetrahydrobiopterin biosynthesis I
BAA_5039	PWY-5664	tetrahydrobiopterin biosynthesis II
BAA_5039	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BAA_5039	PWY-6703	preQ<sub>0</sub> biosynthesis
BAA_5039	PWY-6983	tetrahydrobiopterin biosynthesis III
BAA_5039	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BAA_5054	PWY-6502	oxidized GTP and dGTP detoxification
BAA_5058	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BAA_5058	PWY-6153	autoinducer AI-2 biosynthesis I
BAA_5058	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
BAA_5059	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BAA_5059	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_5059	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BAA_5059	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BAA_5085	PWY-6599	guanine and guanosine salvage II
BAA_5085	PWY-6609	adenine and adenosine salvage III
BAA_5085	PWY-6610	adenine and adenosine salvage IV
BAA_5085	PWY-6620	guanine and guanosine salvage
BAA_5086	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BAA_5086	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BAA_5086	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BAA_5111	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BAA_5111	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BAA_5111	PWY-7242	D-fructuronate degradation
BAA_5111	PWY-7310	D-glucosaminate degradation
BAA_5112	PWY-7310	D-glucosaminate degradation
BAA_5119	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BAA_5119	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BAA_5120	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BAA_5120	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BAA_5121	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BAA_5121	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BAA_5122	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BAA_5122	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BAA_5123	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BAA_5123	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BAA_5124	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BAA_5124	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BAA_5124	PWY-5901	2,3-dihydroxybenzoate biosynthesis
BAA_5124	PWY-6406	salicylate biosynthesis I
BAA_5125	PWY-5839	menaquinol-7 biosynthesis
BAA_5125	PWY-5851	demethylmenaquinol-9 biosynthesis
BAA_5125	PWY-5852	demethylmenaquinol-8 biosynthesis I
BAA_5125	PWY-5853	demethylmenaquinol-6 biosynthesis I
BAA_5125	PWY-5890	menaquinol-10 biosynthesis
BAA_5125	PWY-5891	menaquinol-11 biosynthesis
BAA_5125	PWY-5892	menaquinol-12 biosynthesis
BAA_5125	PWY-5895	menaquinol-13 biosynthesis
BAA_5131	PWY-5941	glycogen degradation II (eukaryotic)
BAA_5131	PWY-622	starch biosynthesis
BAA_5131	PWY-6731	starch degradation III
BAA_5131	PWY-6737	starch degradation V
BAA_5131	PWY-7238	sucrose biosynthesis II
BAA_5132	PWY-622	starch biosynthesis
BAA_5134	PWY-622	starch biosynthesis
BAA_5135	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BAA_5135	PWY-622	starch biosynthesis
BAA_5136	PWY-5481	pyruvate fermentation to lactate
BAA_5136	PWY-6901	superpathway of glucose and xylose degradation
BAA_5166	PWY-3801	sucrose degradation II (sucrose synthase)
BAA_5166	PWY-5054	sorbitol biosynthesis I
BAA_5166	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
BAA_5166	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BAA_5166	PWY-5659	GDP-mannose biosynthesis
BAA_5166	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_5166	PWY-621	sucrose degradation III (sucrose invertase)
BAA_5166	PWY-622	starch biosynthesis
BAA_5166	PWY-6531	mannitol cycle
BAA_5166	PWY-6981	chitin biosynthesis
BAA_5166	PWY-7238	sucrose biosynthesis II
BAA_5166	PWY-7347	sucrose biosynthesis III
BAA_5166	PWY-7385	1,3-propanediol biosynthesis (engineered)
BAA_5174	PWY-6936	seleno-amino acid biosynthesis
BAA_5175	PWY-6854	ethylene biosynthesis III (microbes)
BAA_5188	PWY-3801	sucrose degradation II (sucrose synthase)
BAA_5188	PWY-6527	stachyose degradation
BAA_5188	PWY-6981	chitin biosynthesis
BAA_5188	PWY-7238	sucrose biosynthesis II
BAA_5188	PWY-7343	UDP-glucose biosynthesis
BAA_5189	PWY-6749	CMP-legionaminate biosynthesis I
BAA_5191	PWY-5988	wound-induced proteolysis I
BAA_5191	PWY-6018	seed germination protein turnover
BAA_5196	PWY-101	photosynthesis light reactions
BAA_5196	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
BAA_5207	PWY-2941	L-lysine biosynthesis II
BAA_5207	PWY-5097	L-lysine biosynthesis VI
BAA_5231	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_5241	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BAA_5241	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BAA_5241	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
BAA_5251	PWY-6823	molybdenum cofactor biosynthesis
BAA_5251	PWY-6891	thiazole biosynthesis II (Bacillus)
BAA_5251	PWY-6892	thiazole biosynthesis I (E. coli)
BAA_5251	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BAA_5271	PWY-7310	D-glucosaminate degradation
BAA_5272	PWY-5481	pyruvate fermentation to lactate
BAA_5272	PWY-6901	superpathway of glucose and xylose degradation
BAA_5281	PWY-1361	benzoyl-CoA degradation I (aerobic)
BAA_5281	PWY-5109	2-methylbutanoate biosynthesis
BAA_5281	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BAA_5281	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BAA_5281	PWY-5177	glutaryl-CoA degradation
BAA_5281	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BAA_5281	PWY-6435	4-hydroxybenzoate biosynthesis V
BAA_5281	PWY-6583	pyruvate fermentation to butanol I
BAA_5281	PWY-6863	pyruvate fermentation to hexanol
BAA_5281	PWY-6883	pyruvate fermentation to butanol II
BAA_5281	PWY-6944	androstenedione degradation
BAA_5281	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BAA_5281	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BAA_5281	PWY-7007	methyl ketone biosynthesis
BAA_5281	PWY-7046	4-coumarate degradation (anaerobic)
BAA_5281	PWY-7094	fatty acid salvage
BAA_5281	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BAA_5281	PWY-735	jasmonic acid biosynthesis
BAA_5281	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BAA_5284	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
BAA_5284	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BAA_5344	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_5344	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_5345	PWY-6424	BAA_5345
BAA_5394	PWY-1042	glycolysis IV (plant cytosol)
BAA_5394	PWY-1622	formaldehyde assimilation I (serine pathway)
BAA_5394	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BAA_5394	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_5394	PWY-5723	Rubisco shunt
BAA_5394	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_5394	PWY-6886	1-butanol autotrophic biosynthesis
BAA_5394	PWY-6901	superpathway of glucose and xylose degradation
BAA_5394	PWY-7003	glycerol degradation to butanol
BAA_5394	PWY-7124	ethylene biosynthesis V (engineered)
BAA_5394	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BAA_5395	PWY-1042	glycolysis IV (plant cytosol)
BAA_5395	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BAA_5395	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_5395	PWY-5723	Rubisco shunt
BAA_5395	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_5395	PWY-6886	1-butanol autotrophic biosynthesis
BAA_5395	PWY-6901	superpathway of glucose and xylose degradation
BAA_5395	PWY-7003	glycerol degradation to butanol
BAA_5395	PWY-7124	ethylene biosynthesis V (engineered)
BAA_5395	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BAA_5396	PWY-1042	glycolysis IV (plant cytosol)
BAA_5396	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_5396	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_5396	PWY-7003	glycerol degradation to butanol
BAA_5397	PWY-1042	glycolysis IV (plant cytosol)
BAA_5397	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_5397	PWY-6886	1-butanol autotrophic biosynthesis
BAA_5397	PWY-6901	superpathway of glucose and xylose degradation
BAA_5397	PWY-7003	glycerol degradation to butanol
BAA_5398	PWY-1042	glycolysis IV (plant cytosol)
BAA_5398	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_5398	PWY-6901	superpathway of glucose and xylose degradation
BAA_5398	PWY-7003	glycerol degradation to butanol
BAA_5408	PWY-1081	homogalacturonan degradation
BAA_5408	PWY-7246	pectin degradation II
BAA_5408	PWY-7248	pectin degradation III
BAA_5461	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
BAA_5462	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
BAA_5463	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_5463	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BAA_5463	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_5471	PWY-7310	D-glucosaminate degradation
BAA_5472	PWY-7310	D-glucosaminate degradation
BAA_5474	PWY-6834	spermidine biosynthesis III
BAA_5476	PWY-7310	D-glucosaminate degradation
BAA_5477	PWY-7310	D-glucosaminate degradation
BAA_5491	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
BAA_5532	PWY-3821	galactose degradation III
BAA_5532	PWY-6317	galactose degradation I (Leloir pathway)
BAA_5532	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
BAA_5532	PWY-6527	stachyose degradation
BAA_5532	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
BAA_5532	PWY-7344	UDP-D-galactose biosynthesis
BAA_5534	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BAA_5534	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BAA_5534	PWY-5989	stearate biosynthesis II (bacteria and plants)
BAA_5534	PWY-5994	palmitate biosynthesis I (animals and fungi)
BAA_5534	PWY-6113	superpathway of mycolate biosynthesis
BAA_5534	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BAA_5534	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BAA_5534	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BAA_5534	PWYG-321	mycolate biosynthesis
BAA_5536	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
BAA_5540	PWY-6986	alginate degradation
BAA_5557	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_5557	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_5575	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BAA_5577	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BAA_5585	PWY-7183	pyrimidine nucleobases salvage I
BAA_5586	PWY-1622	formaldehyde assimilation I (serine pathway)
BAA_5586	PWY-181	photorespiration
BAA_5586	PWY-2161	folate polyglutamylation
BAA_5586	PWY-2201	folate transformations I
BAA_5586	PWY-3661	glycine betaine degradation I
BAA_5586	PWY-3661-1	glycine betaine degradation II (mammalian)
BAA_5586	PWY-3841	folate transformations II
BAA_5586	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_5600	PWY-7199	pyrimidine deoxyribonucleosides salvage
BAA_5602	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BAA_5603	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_5604	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BAA_5604	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BAA_5605	PWY-1042	glycolysis IV (plant cytosol)
BAA_5605	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BAA_5605	PWY-5484	glycolysis II (from fructose 6-phosphate)
BAA_5605	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BAA_5605	PWY-7385	1,3-propanediol biosynthesis (engineered)
BAA_5608	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BAA_5608	PWY-7177	UTP and CTP dephosphorylation II
BAA_5608	PWY-7185	UTP and CTP dephosphorylation I
BAA_5613	PWY-1361	benzoyl-CoA degradation I (aerobic)
BAA_5613	PWY-5109	2-methylbutanoate biosynthesis
BAA_5613	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BAA_5613	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BAA_5613	PWY-5177	glutaryl-CoA degradation
BAA_5613	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BAA_5613	PWY-6435	4-hydroxybenzoate biosynthesis V
BAA_5613	PWY-6583	pyruvate fermentation to butanol I
BAA_5613	PWY-6863	pyruvate fermentation to hexanol
BAA_5613	PWY-6883	pyruvate fermentation to butanol II
BAA_5613	PWY-6944	androstenedione degradation
BAA_5613	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BAA_5613	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BAA_5613	PWY-7007	methyl ketone biosynthesis
BAA_5613	PWY-7046	4-coumarate degradation (anaerobic)
BAA_5613	PWY-7094	fatty acid salvage
BAA_5613	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BAA_5613	PWY-735	jasmonic acid biosynthesis
BAA_5613	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BAA_5641	PWY-7310	D-glucosaminate degradation
BAA_5643	PWY-40	putrescine biosynthesis I
BAA_5643	PWY-6305	putrescine biosynthesis IV
BAA_5662	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BAA_5662	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BAA_5663	PWY-1281	sulfoacetaldehyde degradation I
BAA_5663	PWY-5482	pyruvate fermentation to acetate II
BAA_5663	PWY-5485	pyruvate fermentation to acetate IV
BAA_5663	PWY-5497	purine nucleobases degradation II (anaerobic)
BAA_5663	PWY-6637	sulfolactate degradation II
BAA_5665	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BAA_5665	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BAA_5683	PWY-5344	L-homocysteine biosynthesis
BAA_5683	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
BAA_5692	PWY-6910	hydroxymethylpyrimidine salvage
BAA_5692	PWY-7356	thiamin salvage IV (yeast)
BAA_5692	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BAA_5727	PWY-6854	ethylene biosynthesis III (microbes)
BAA_5731	PWY-3821	galactose degradation III
BAA_5731	PWY-6317	galactose degradation I (Leloir pathway)
BAA_5731	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
BAA_5731	PWY-6527	stachyose degradation
BAA_5731	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
BAA_5731	PWY-7344	UDP-D-galactose biosynthesis
BAA_5751	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
