BGIGA_006	PWY-6938	NADH repair
BGIGA_014	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BGIGA_014	PWY-6148	tetrahydromethanopterin biosynthesis
BGIGA_014	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BGIGA_014	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BGIGA_023	PWY-6898	thiamin salvage III
BGIGA_023	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BGIGA_023	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BGIGA_024	PWY-1622	formaldehyde assimilation I (serine pathway)
BGIGA_024	PWY-5392	reductive TCA cycle II
BGIGA_024	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BGIGA_024	PWY-5690	TCA cycle II (plants and fungi)
BGIGA_024	PWY-5913	TCA cycle VI (obligate autotrophs)
BGIGA_024	PWY-6728	methylaspartate cycle
BGIGA_024	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BGIGA_024	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BGIGA_024	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BGIGA_044	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BGIGA_045	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BGIGA_050	PWY-5392	reductive TCA cycle II
BGIGA_050	PWY-5537	pyruvate fermentation to acetate V
BGIGA_050	PWY-5538	pyruvate fermentation to acetate VI
BGIGA_050	PWY-5690	TCA cycle II (plants and fungi)
BGIGA_050	PWY-5913	TCA cycle VI (obligate autotrophs)
BGIGA_050	PWY-6728	methylaspartate cycle
BGIGA_050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BGIGA_050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BGIGA_069	PWY-5663	tetrahydrobiopterin biosynthesis I
BGIGA_069	PWY-5664	tetrahydrobiopterin biosynthesis II
BGIGA_069	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BGIGA_069	PWY-6703	preQ<sub>0</sub> biosynthesis
BGIGA_069	PWY-6983	tetrahydrobiopterin biosynthesis III
BGIGA_069	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BGIGA_076	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_082	PWY-5101	L-isoleucine biosynthesis II
BGIGA_082	PWY-5103	L-isoleucine biosynthesis III
BGIGA_082	PWY-5104	L-isoleucine biosynthesis IV
BGIGA_082	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BGIGA_083	PWY-5101	L-isoleucine biosynthesis II
BGIGA_083	PWY-5103	L-isoleucine biosynthesis III
BGIGA_083	PWY-5104	L-isoleucine biosynthesis IV
BGIGA_083	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BGIGA_083	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BGIGA_083	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BGIGA_083	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BGIGA_085	PWY-5101	L-isoleucine biosynthesis II
BGIGA_085	PWY-5103	L-isoleucine biosynthesis III
BGIGA_085	PWY-5104	L-isoleucine biosynthesis IV
BGIGA_085	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BGIGA_088	PWY-2941	L-lysine biosynthesis II
BGIGA_088	PWY-2942	L-lysine biosynthesis III
BGIGA_088	PWY-5097	L-lysine biosynthesis VI
BGIGA_092	PWY-6167	flavin biosynthesis II (archaea)
BGIGA_092	PWY-6168	flavin biosynthesis III (fungi)
BGIGA_101	PWY-4381	fatty acid biosynthesis initiation I
BGIGA_101	PWY-6799	fatty acid biosynthesis (plant mitochondria)
BGIGA_101	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BGIGA_103	PWY-5392	reductive TCA cycle II
BGIGA_103	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BGIGA_103	PWY-5690	TCA cycle II (plants and fungi)
BGIGA_103	PWY-5913	TCA cycle VI (obligate autotrophs)
BGIGA_103	PWY-6728	methylaspartate cycle
BGIGA_103	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BGIGA_103	PWY-7254	TCA cycle VII (acetate-producers)
BGIGA_103	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BGIGA_118	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_125	PWY-5686	UMP biosynthesis
BGIGA_127	PWY-5484	glycolysis II (from fructose 6-phosphate)
BGIGA_131	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BGIGA_133	PWY-5704	urea degradation II
BGIGA_134	PWY-5704	urea degradation II
BGIGA_135	PWY-2941	L-lysine biosynthesis II
BGIGA_135	PWY-2942	L-lysine biosynthesis III
BGIGA_135	PWY-5097	L-lysine biosynthesis VI
BGIGA_135	PWY-6559	spermidine biosynthesis II
BGIGA_135	PWY-6562	norspermidine biosynthesis
BGIGA_135	PWY-7153	grixazone biosynthesis
BGIGA_136	PWY-702	L-methionine biosynthesis II
BGIGA_138	PWY-3841	folate transformations II
BGIGA_138	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BGIGA_138	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BGIGA_138	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BGIGA_138	PWY-7199	pyrimidine deoxyribonucleosides salvage
BGIGA_138	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BGIGA_143	PWY-6164	3-dehydroquinate biosynthesis I
BGIGA_146	PWY-5381	pyridine nucleotide cycling (plants)
BGIGA_146	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BGIGA_146	PWY-6596	adenosine nucleotides degradation I
BGIGA_146	PWY-6606	guanosine nucleotides degradation II
BGIGA_146	PWY-6607	guanosine nucleotides degradation I
BGIGA_146	PWY-6608	guanosine nucleotides degradation III
BGIGA_146	PWY-7185	UTP and CTP dephosphorylation I
BGIGA_148	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_149	PWY-6123	inosine-5'-phosphate biosynthesis I
BGIGA_149	PWY-6124	inosine-5'-phosphate biosynthesis II
BGIGA_149	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_149	PWY-7234	inosine-5'-phosphate biosynthesis III
BGIGA_151	PWY-6123	inosine-5'-phosphate biosynthesis I
BGIGA_151	PWY-7234	inosine-5'-phosphate biosynthesis III
BGIGA_152	PWY-6123	inosine-5'-phosphate biosynthesis I
BGIGA_152	PWY-6124	inosine-5'-phosphate biosynthesis II
BGIGA_152	PWY-7234	inosine-5'-phosphate biosynthesis III
BGIGA_153	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BGIGA_153	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BGIGA_153	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BGIGA_153	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BGIGA_154	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BGIGA_154	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BGIGA_154	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BGIGA_156	PWY-6123	inosine-5'-phosphate biosynthesis I
BGIGA_156	PWY-6124	inosine-5'-phosphate biosynthesis II
BGIGA_156	PWY-7234	inosine-5'-phosphate biosynthesis III
BGIGA_157	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BGIGA_157	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BGIGA_157	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BGIGA_158	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_159	PWY-4381	fatty acid biosynthesis initiation I
BGIGA_159	PWY-5743	3-hydroxypropanoate cycle
BGIGA_159	PWY-5744	glyoxylate assimilation
BGIGA_159	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BGIGA_159	PWY-6679	jadomycin biosynthesis
BGIGA_159	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BGIGA_160	PWY-1042	glycolysis IV (plant cytosol)
BGIGA_160	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BGIGA_160	PWY-5484	glycolysis II (from fructose 6-phosphate)
BGIGA_160	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BGIGA_160	PWY-7385	1,3-propanediol biosynthesis (engineered)
BGIGA_162	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BGIGA_162	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BGIGA_162	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
BGIGA_163	PWY-5663	tetrahydrobiopterin biosynthesis I
BGIGA_163	PWY-5664	tetrahydrobiopterin biosynthesis II
BGIGA_163	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BGIGA_163	PWY-6703	preQ<sub>0</sub> biosynthesis
BGIGA_163	PWY-6983	tetrahydrobiopterin biosynthesis III
BGIGA_163	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BGIGA_177	PWY-4261	glycerol degradation I
BGIGA_178	PWY-4261	glycerol degradation I
BGIGA_178	PWY-6118	glycerol-3-phosphate shuttle
BGIGA_178	PWY-6952	glycerophosphodiester degradation
BGIGA_181	PWY-5057	L-valine degradation II
BGIGA_181	PWY-5076	L-leucine degradation III
BGIGA_181	PWY-5078	L-isoleucine degradation II
BGIGA_181	PWY-5101	L-isoleucine biosynthesis II
BGIGA_181	PWY-5103	L-isoleucine biosynthesis III
BGIGA_181	PWY-5104	L-isoleucine biosynthesis IV
BGIGA_181	PWY-5108	L-isoleucine biosynthesis V
BGIGA_183	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BGIGA_183	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BGIGA_183	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BGIGA_183	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BGIGA_183	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BGIGA_183	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BGIGA_183	PWY-7205	CMP phosphorylation
BGIGA_183	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BGIGA_183	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BGIGA_183	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_183	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BGIGA_183	PWY-7224	purine deoxyribonucleosides salvage
BGIGA_183	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BGIGA_183	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BGIGA_187	PWY-3841	folate transformations II
BGIGA_187	PWY-6614	tetrahydrofolate biosynthesis
BGIGA_191	PWY-2201	folate transformations I
BGIGA_191	PWY-3841	folate transformations II
BGIGA_192	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
BGIGA_194	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
BGIGA_194	PWY-2201	folate transformations I
BGIGA_194	PWY-3841	folate transformations II
BGIGA_194	PWY-5030	L-histidine degradation III
BGIGA_194	PWY-5497	purine nucleobases degradation II (anaerobic)
BGIGA_194	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BGIGA_195	PWY-6703	preQ<sub>0</sub> biosynthesis
BGIGA_206	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BGIGA_209	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BGIGA_215	PWY-5958	acridone alkaloid biosynthesis
BGIGA_215	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BGIGA_215	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BGIGA_216	PWY-5958	acridone alkaloid biosynthesis
BGIGA_216	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BGIGA_216	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BGIGA_221	PWY-3781	aerobic respiration I (cytochrome c)
BGIGA_221	PWY-4521	arsenite oxidation I (respiratory)
BGIGA_221	PWY-6692	Fe(II) oxidation
BGIGA_221	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BGIGA_224	PWY-1281	sulfoacetaldehyde degradation I
BGIGA_224	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BGIGA_224	PWY-5482	pyruvate fermentation to acetate II
BGIGA_224	PWY-5485	pyruvate fermentation to acetate IV
BGIGA_224	PWY-5497	purine nucleobases degradation II (anaerobic)
BGIGA_224	PWY-6637	sulfolactate degradation II
BGIGA_224	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BGIGA_225	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BGIGA_225	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BGIGA_229	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BGIGA_232	PWY-6891	thiazole biosynthesis II (Bacillus)
BGIGA_232	PWY-6892	thiazole biosynthesis I (E. coli)
BGIGA_232	PWY-7560	methylerythritol phosphate pathway II
BGIGA_238	PWY-2941	L-lysine biosynthesis II
BGIGA_238	PWY-5097	L-lysine biosynthesis VI
BGIGA_241	PWY-6700	queuosine biosynthesis
BGIGA_246	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BGIGA_246	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BGIGA_246	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BGIGA_247	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BGIGA_247	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BGIGA_249	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BGIGA_249	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BGIGA_249	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BGIGA_249	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BGIGA_250	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BGIGA_250	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BGIGA_256	PWY-6012	acyl carrier protein metabolism I
BGIGA_256	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BGIGA_258	PWY-4202	arsenate detoxification I (glutaredoxin)
BGIGA_258	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BGIGA_258	PWY-6608	guanosine nucleotides degradation III
BGIGA_258	PWY-6609	adenine and adenosine salvage III
BGIGA_258	PWY-6611	adenine and adenosine salvage V
BGIGA_258	PWY-6620	guanine and guanosine salvage
BGIGA_258	PWY-6627	salinosporamide A biosynthesis
BGIGA_258	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
BGIGA_258	PWY-7179	purine deoxyribonucleosides degradation I
BGIGA_258	PWY-7179-1	purine deoxyribonucleosides degradation
BGIGA_259	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BGIGA_259	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BGIGA_270	PWY-6829	tRNA methylation (yeast)
BGIGA_270	PWY-7285	methylwyosine biosynthesis
BGIGA_270	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
BGIGA_271	PWY-4983	L-citrulline-nitric oxide cycle
BGIGA_271	PWY-4984	urea cycle
BGIGA_271	PWY-5	canavanine biosynthesis
BGIGA_271	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BGIGA_271	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BGIGA_277	PWY-7391	isoprene biosynthesis II (engineered)
BGIGA_277	PWY-922	mevalonate pathway I
BGIGA_283	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BGIGA_283	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BGIGA_287	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BGIGA_287	PWY-5723	Rubisco shunt
BGIGA_289	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BGIGA_289	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
BGIGA_290	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BGIGA_290	PWY-3461	L-tyrosine biosynthesis II
BGIGA_290	PWY-3462	L-phenylalanine biosynthesis II
BGIGA_290	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BGIGA_290	PWY-6120	L-tyrosine biosynthesis III
BGIGA_290	PWY-6627	salinosporamide A biosynthesis
BGIGA_291	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
BGIGA_293	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
BGIGA_298	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BGIGA_303	PWY-2941	L-lysine biosynthesis II
BGIGA_303	PWY-2942	L-lysine biosynthesis III
BGIGA_303	PWY-5097	L-lysine biosynthesis VI
BGIGA_307	PWY-5381	pyridine nucleotide cycling (plants)
BGIGA_307	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BGIGA_310	PWY-6167	flavin biosynthesis II (archaea)
BGIGA_310	PWY-6168	flavin biosynthesis III (fungi)
BGIGA_314	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BGIGA_314	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BGIGA_315	PWY-5686	UMP biosynthesis
BGIGA_316	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BGIGA_316	PWY-5686	UMP biosynthesis
BGIGA_316	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BGIGA_317	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BGIGA_317	PWY-5686	UMP biosynthesis
BGIGA_317	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BGIGA_319	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BGIGA_319	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BGIGA_320	PWY-4983	L-citrulline-nitric oxide cycle
BGIGA_320	PWY-4984	urea cycle
BGIGA_320	PWY-5	canavanine biosynthesis
BGIGA_320	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BGIGA_320	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BGIGA_323	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BGIGA_323	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BGIGA_323	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BGIGA_323	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BGIGA_323	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BGIGA_323	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BGIGA_323	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BGIGA_323	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BGIGA_330	PWY-6700	queuosine biosynthesis
BGIGA_335	PWY-2941	L-lysine biosynthesis II
BGIGA_335	PWY-2942	L-lysine biosynthesis III
BGIGA_335	PWY-5097	L-lysine biosynthesis VI
BGIGA_335	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BGIGA_335	PWY-6559	spermidine biosynthesis II
BGIGA_335	PWY-6562	norspermidine biosynthesis
BGIGA_335	PWY-7153	grixazone biosynthesis
BGIGA_335	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BGIGA_336	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_339	PWY-1042	glycolysis IV (plant cytosol)
BGIGA_339	PWY-5484	glycolysis II (from fructose 6-phosphate)
BGIGA_339	PWY-6886	1-butanol autotrophic biosynthesis
BGIGA_339	PWY-6901	superpathway of glucose and xylose degradation
BGIGA_339	PWY-7003	glycerol degradation to butanol
BGIGA_340	PWY-6854	ethylene biosynthesis III (microbes)
BGIGA_341	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BGIGA_341	PWY-6148	tetrahydromethanopterin biosynthesis
BGIGA_341	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BGIGA_341	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BGIGA_343	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BGIGA_343	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BGIGA_345	PWY-6749	CMP-legionaminate biosynthesis I
BGIGA_346	PWY-622	starch biosynthesis
BGIGA_353	PWY-6936	seleno-amino acid biosynthesis
BGIGA_355	PWY-5913	TCA cycle VI (obligate autotrophs)
BGIGA_355	PWY-6549	L-glutamine biosynthesis III
BGIGA_355	PWY-6728	methylaspartate cycle
BGIGA_355	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BGIGA_355	PWY-7124	ethylene biosynthesis V (engineered)
BGIGA_355	PWY-7254	TCA cycle VII (acetate-producers)
BGIGA_355	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BGIGA_359	PWY-5839	menaquinol-7 biosynthesis
BGIGA_359	PWY-5851	demethylmenaquinol-9 biosynthesis
BGIGA_359	PWY-5852	demethylmenaquinol-8 biosynthesis I
BGIGA_359	PWY-5853	demethylmenaquinol-6 biosynthesis I
BGIGA_359	PWY-5890	menaquinol-10 biosynthesis
BGIGA_359	PWY-5891	menaquinol-11 biosynthesis
BGIGA_359	PWY-5892	menaquinol-12 biosynthesis
BGIGA_359	PWY-5895	menaquinol-13 biosynthesis
BGIGA_360	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BGIGA_360	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BGIGA_363	PWY-1042	glycolysis IV (plant cytosol)
BGIGA_363	PWY-1622	formaldehyde assimilation I (serine pathway)
BGIGA_363	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BGIGA_363	PWY-5484	glycolysis II (from fructose 6-phosphate)
BGIGA_363	PWY-5723	Rubisco shunt
BGIGA_363	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BGIGA_363	PWY-6886	1-butanol autotrophic biosynthesis
BGIGA_363	PWY-6901	superpathway of glucose and xylose degradation
BGIGA_363	PWY-7003	glycerol degradation to butanol
BGIGA_363	PWY-7124	ethylene biosynthesis V (engineered)
BGIGA_363	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BGIGA_396	PWY-1042	glycolysis IV (plant cytosol)
BGIGA_396	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BGIGA_396	PWY-5484	glycolysis II (from fructose 6-phosphate)
BGIGA_396	PWY-5723	Rubisco shunt
BGIGA_396	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BGIGA_396	PWY-6886	1-butanol autotrophic biosynthesis
BGIGA_396	PWY-6901	superpathway of glucose and xylose degradation
BGIGA_396	PWY-7003	glycerol degradation to butanol
BGIGA_396	PWY-7124	ethylene biosynthesis V (engineered)
BGIGA_396	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BGIGA_402	PWY-5669	phosphatidylethanolamine biosynthesis I
BGIGA_406	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BGIGA_406	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BGIGA_408	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BGIGA_408	PWY-7177	UTP and CTP dephosphorylation II
BGIGA_408	PWY-7185	UTP and CTP dephosphorylation I
BGIGA_411	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_412	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BGIGA_412	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BGIGA_413	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BGIGA_413	PWY-5723	Rubisco shunt
BGIGA_416	PWY-2941	L-lysine biosynthesis II
BGIGA_416	PWY-2942	L-lysine biosynthesis III
BGIGA_416	PWY-5097	L-lysine biosynthesis VI
BGIGA_418	PWY-5381	pyridine nucleotide cycling (plants)
BGIGA_425	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BGIGA_425	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BGIGA_434	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BGIGA_434	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BGIGA_434	PWY-5901	2,3-dihydroxybenzoate biosynthesis
BGIGA_434	PWY-6406	salicylate biosynthesis I
BGIGA_436	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
BGIGA_436	PWY-6174	mevalonate pathway II (archaea)
BGIGA_436	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
BGIGA_436	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
BGIGA_436	PWY-7102	bisabolene biosynthesis
BGIGA_436	PWY-7391	isoprene biosynthesis II (engineered)
BGIGA_436	PWY-7524	mevalonate pathway III (archaea)
BGIGA_436	PWY-7560	methylerythritol phosphate pathway II
BGIGA_436	PWY-922	mevalonate pathway I
BGIGA_441	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BGIGA_442	PWY-2781	<i>cis</i>-zeatin biosynthesis
BGIGA_444	PWY-2161	folate polyglutamylation
BGIGA_445	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BGIGA_466	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BGIGA_466	PWY-6596	adenosine nucleotides degradation I
BGIGA_466	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_469	PWY-6749	CMP-legionaminate biosynthesis I
BGIGA_472	PWY-4381	fatty acid biosynthesis initiation I
BGIGA_472	PWY-5743	3-hydroxypropanoate cycle
BGIGA_472	PWY-5744	glyoxylate assimilation
BGIGA_472	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BGIGA_472	PWY-6679	jadomycin biosynthesis
BGIGA_472	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BGIGA_473	PWY-3781	aerobic respiration I (cytochrome c)
BGIGA_473	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BGIGA_473	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BGIGA_473	PWY-5690	TCA cycle II (plants and fungi)
BGIGA_473	PWY-6728	methylaspartate cycle
BGIGA_473	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BGIGA_473	PWY-7254	TCA cycle VII (acetate-producers)
BGIGA_473	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BGIGA_474	PWY-3781	aerobic respiration I (cytochrome c)
BGIGA_474	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BGIGA_474	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BGIGA_474	PWY-5690	TCA cycle II (plants and fungi)
BGIGA_474	PWY-6728	methylaspartate cycle
BGIGA_474	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BGIGA_474	PWY-7254	TCA cycle VII (acetate-producers)
BGIGA_474	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BGIGA_476	PWY-6823	molybdenum cofactor biosynthesis
BGIGA_476	PWY-6891	thiazole biosynthesis II (Bacillus)
BGIGA_476	PWY-6892	thiazole biosynthesis I (E. coli)
BGIGA_476	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BGIGA_479	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BGIGA_479	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BGIGA_482	PWY-282	cuticular wax biosynthesis
BGIGA_484	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BGIGA_491	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BGIGA_491	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BGIGA_494	PWY-3961	phosphopantothenate biosynthesis II
BGIGA_500	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BGIGA_500	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BGIGA_512	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BGIGA_512	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BGIGA_512	PWY-6936	seleno-amino acid biosynthesis
BGIGA_512	PWY-702	L-methionine biosynthesis II
BGIGA_515	PWY-4381	fatty acid biosynthesis initiation I
BGIGA_516	PWY-5839	menaquinol-7 biosynthesis
BGIGA_516	PWY-5844	menaquinol-9 biosynthesis
BGIGA_516	PWY-5849	menaquinol-6 biosynthesis
BGIGA_516	PWY-5890	menaquinol-10 biosynthesis
BGIGA_516	PWY-5891	menaquinol-11 biosynthesis
BGIGA_516	PWY-5892	menaquinol-12 biosynthesis
BGIGA_516	PWY-5895	menaquinol-13 biosynthesis
BGIGA_522	PWY-1042	glycolysis IV (plant cytosol)
BGIGA_522	PWY-5484	glycolysis II (from fructose 6-phosphate)
BGIGA_522	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BGIGA_522	PWY-7003	glycerol degradation to butanol
BGIGA_524	PWY-6614	tetrahydrofolate biosynthesis
BGIGA_526	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BGIGA_526	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BGIGA_540	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BGIGA_540	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BGIGA_540	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BGIGA_541	PWY-3821	galactose degradation III
BGIGA_541	PWY-6317	galactose degradation I (Leloir pathway)
BGIGA_541	PWY-6527	stachyose degradation
BGIGA_543	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BGIGA_543	PWY-6416	quinate degradation II
BGIGA_543	PWY-6707	gallate biosynthesis
BGIGA_549	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BGIGA_549	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BGIGA_550	PWY-6167	flavin biosynthesis II (archaea)
BGIGA_550	PWY-6168	flavin biosynthesis III (fungi)
BGIGA_550	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_553	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BGIGA_554	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
BGIGA_554	PWY-6167	flavin biosynthesis II (archaea)
BGIGA_554	PWY-6168	flavin biosynthesis III (fungi)
BGIGA_556	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BGIGA_559	PWY-6871	3-methylbutanol biosynthesis
BGIGA_567	PWY-40	putrescine biosynthesis I
BGIGA_567	PWY-6305	putrescine biosynthesis IV
BGIGA_568	PWY-7205	CMP phosphorylation
BGIGA_569	PWY-5367	petroselinate biosynthesis
BGIGA_569	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BGIGA_569	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BGIGA_569	PWY-5989	stearate biosynthesis II (bacteria and plants)
BGIGA_569	PWY-5994	palmitate biosynthesis I (animals and fungi)
BGIGA_569	PWY-6113	superpathway of mycolate biosynthesis
BGIGA_569	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BGIGA_569	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BGIGA_569	PWY-6951	BGIGA_569|fabG|YP_006337660.1|GeneID:12973577
BGIGA_569	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
BGIGA_569	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BGIGA_569	PWYG-321	mycolate biosynthesis
BGIGA_570	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
BGIGA_570	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
BGIGA_576	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BGIGA_576	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BGIGA_583	PWY-1042	glycolysis IV (plant cytosol)
BGIGA_583	PWY-5484	glycolysis II (from fructose 6-phosphate)
BGIGA_583	PWY-6901	superpathway of glucose and xylose degradation
BGIGA_583	PWY-7003	glycerol degradation to butanol
BGIGA_587	PWY-5392	reductive TCA cycle II
BGIGA_587	PWY-5537	pyruvate fermentation to acetate V
BGIGA_587	PWY-5538	pyruvate fermentation to acetate VI
BGIGA_587	PWY-5690	TCA cycle II (plants and fungi)
BGIGA_587	PWY-5913	TCA cycle VI (obligate autotrophs)
BGIGA_587	PWY-6728	methylaspartate cycle
BGIGA_587	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BGIGA_587	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BGIGA_589	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BGIGA_589	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BGIGA_589	PWY-5989	stearate biosynthesis II (bacteria and plants)
BGIGA_589	PWY-5994	palmitate biosynthesis I (animals and fungi)
BGIGA_589	PWY-6113	superpathway of mycolate biosynthesis
BGIGA_589	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BGIGA_589	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BGIGA_589	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BGIGA_589	PWYG-321	mycolate biosynthesis
BGIGA_600	PWY-6823	molybdenum cofactor biosynthesis
BGIGA_600	PWY-6891	thiazole biosynthesis II (Bacillus)
BGIGA_600	PWY-6892	thiazole biosynthesis I (E. coli)
BGIGA_600	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
