BbuJD1_0002	SSF51445	(Trans)glycosidases
BbuJD1_0003	SSF53448	Nucleotide-diphospho-sugar transferases
BbuJD1_0004	SSF53738	Phosphoglucomutase, first 3 domains
BbuJD1_0005	SSF52374	Nucleotidylyl transferase
BbuJD1_0007	SSF56784	HAD-like
BbuJD1_0008	SSF143597	YojJ-like
BbuJD1_0010	SSF56214	4'-phosphopantetheinyl transferase
BbuJD1_0012	SSF55120	Pseudouridine synthase
BbuJD1_0013	SSF52141	Uracil-DNA glycosylase-like
BbuJD1_0014	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0016	SSF52821	Rhodanese/Cell cycle control phosphatase
BbuJD1_0018	SSF55120	Pseudouridine synthase
BbuJD1_0020	SSF53784	Phosphofructokinase
BbuJD1_0021	SSF111337	QueA-like
BbuJD1_0022	SSF46785	"Winged helix" DNA-binding domain
BbuJD1_0022	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0023	SSF47781	RuvA domain 2-like
BbuJD1_0023	SSF50249	Nucleic acid-binding proteins
BbuJD1_0024	SSF50952	Soluble quinoprotein glucose dehydrogenase
BbuJD1_0025	SSF75625	YebC-like
BbuJD1_0026	SSF51735	NAD(P)-binding Rossmann-fold domains
BbuJD1_0026	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
BbuJD1_0030	SSF51306	LexA/Signal peptidase
BbuJD1_0031	SSF51306	LexA/Signal peptidase
BbuJD1_0032	SSF56436	C-type lectin-like
BbuJD1_0033	SSF74982	Small protein B (SmpB)
BbuJD1_0035	SSF56719	Type II DNA topoisomerase
BbuJD1_0036	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0036	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BbuJD1_0036	SSF56719	Type II DNA topoisomerase
BbuJD1_0037	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BbuJD1_0039	SSF54534	FKBP-like
BbuJD1_0040	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
BbuJD1_0040	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0042	SSF109755	PhoU-like
BbuJD1_0045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0046	SSF53098	Ribonuclease H-like
BbuJD1_0053	SSF52141	Uracil-DNA glycosylase-like
BbuJD1_0055	SSF51351	Triosephosphate isomerase (TIM)
BbuJD1_0056	SSF53748	Phosphoglycerate kinase
BbuJD1_0057	SSF51735	NAD(P)-binding Rossmann-fold domains
BbuJD1_0057	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BbuJD1_0058	SSF48452	TPR-like
BbuJD1_0059	SSF54631	CBS-domain pair
BbuJD1_0059	SSF56176	FAD-binding/transporter-associated domain-like
BbuJD1_0060	SSF55486	Metalloproteases ("zincins"), catalytic domain
BbuJD1_0061	SSF52833	Thioredoxin-like
BbuJD1_0062	SSF75217	alpha/beta knot
BbuJD1_0064	SSF50486	FMT C-terminal domain-like
BbuJD1_0064	SSF53328	Formyltransferase
BbuJD1_0065	SSF56420	Peptide deformylase
BbuJD1_0066	SSF52833	Thioredoxin-like
BbuJD1_0067	SSF53092	Creatinase/prolidase N-terminal domain
BbuJD1_0067	SSF55920	Creatinase/aminopeptidase
BbuJD1_0068	SSF56784	HAD-like
BbuJD1_0069	SSF144052	Thermophilic metalloprotease-like
BbuJD1_0074	SSF75620	Release factor
BbuJD1_0076	SSF47364	Domain of the SRP/SRP receptor G-proteins
BbuJD1_0076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0084	SSF53383	PLP-dependent transferases
BbuJD1_0085	SSF82649	SufE/NifU
BbuJD1_0086	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0086	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0087	SSF51735	NAD(P)-binding Rossmann-fold domains
BbuJD1_0087	SSF56327	LDH C-terminal domain-like
BbuJD1_0088	SSF50447	Translation proteins
BbuJD1_0088	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0088	SSF54980	EF-G C-terminal domain-like
BbuJD1_0090	SSF81333	F1F0 ATP synthase subunit C
BbuJD1_0093	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0094	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
BbuJD1_0094	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0098	SSF160443	SMR domain-like
BbuJD1_0098	SSF48334	DNA repair protein MutS, domain III
BbuJD1_0098	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0099	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0100	SSF53681	Aspartate/glutamate racemase
BbuJD1_0101	SSF50249	Nucleic acid-binding proteins
BbuJD1_0101	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0103	SSF53271	PRTase-like
BbuJD1_0104	SSF50156	PDZ domain-like
BbuJD1_0104	SSF50494	Trypsin-like serine proteases
BbuJD1_0105	SSF55920	Creatinase/aminopeptidase
BbuJD1_0106	SSF48452	TPR-like
BbuJD1_0107	SSF48013	NusB-like
BbuJD1_0108	SSF109998	Triger factor/SurA peptide-binding domain-like
BbuJD1_0108	SSF54534	FKBP-like
BbuJD1_0109	SSF53901	Thiolase-like
BbuJD1_0111	SSF48024	N-terminal domain of DnaB helicase
BbuJD1_0111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0112	SSF55653	Ribosomal protein L9 C-domain
BbuJD1_0112	SSF55658	L9 N-domain-like
BbuJD1_0113	SSF46911	Ribosomal protein S18
BbuJD1_0114	SSF50249	Nucleic acid-binding proteins
BbuJD1_0115	SSF54995	Ribosomal protein S6
BbuJD1_0116	SSF47240	Ferritin-like
BbuJD1_0116	SSF55604	Glucose permease domain IIB
BbuJD1_0118	SSF50156	PDZ domain-like
BbuJD1_0120	SSF64005	Undecaprenyl diphosphate synthase
BbuJD1_0121	SSF55194	Ribosome recycling factor, RRF
BbuJD1_0122	SSF46934	UBA-like
BbuJD1_0122	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
BbuJD1_0123	SSF52313	Ribosomal protein S2
BbuJD1_0126	SSF48452	TPR-like
BbuJD1_0127	SSF50249	Nucleic acid-binding proteins
BbuJD1_0128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0129	SSF55120	Pseudouridine synthase
BbuJD1_0129	SSF55174	Alpha-L RNA-binding motif
BbuJD1_0131	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0131	SSF54752	RecA protein, C-terminal domain
BbuJD1_0132	SSF46557	GreA transcript cleavage protein, N-terminal domain
BbuJD1_0132	SSF54534	FKBP-like
BbuJD1_0133	SSF48452	TPR-like
BbuJD1_0134	SSF48452	TPR-like
BbuJD1_0135	SSF52954	Class II aaRS ABD-related
BbuJD1_0135	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0136	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
BbuJD1_0136	SSF56519	Penicillin binding protein dimerisation domain
BbuJD1_0136	SSF56601	beta-lactamase/transpeptidase-like
BbuJD1_0137	SSF56801	Acetyl-CoA synthetase-like
BbuJD1_0141	SSF51230	Single hybrid motif
BbuJD1_0142	SSF56954	Outer membrane efflux proteins (OEP)
BbuJD1_0144	SSF53850	Periplasmic binding protein-like II
BbuJD1_0145	SSF161098	MetI-like
BbuJD1_0146	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0147	SSF64518	Phase 1 flagellin
BbuJD1_0151	SSF51338	Composite domain of metallo-dependent hydrolases
BbuJD1_0151	SSF51556	Metallo-dependent hydrolases
BbuJD1_0152	SSF100950	NagB/RpiA/CoA transferase-like
BbuJD1_0153	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
BbuJD1_0153	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
BbuJD1_0154	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0154	SSF81767	Pre-protein crosslinking domain of SecA
BbuJD1_0154	SSF81886	Helical scaffold and wing domains of SecA
BbuJD1_0160	SSF50621	Alanine racemase C-terminal domain-like
BbuJD1_0160	SSF51419	PLP-binding barrel
BbuJD1_0165	SSF110296	Oligoxyloglucan reducing end-specific cellobiohydrolase
BbuJD1_0165	SSF51445	(Trans)glycosidases
BbuJD1_0166	SSF51445	(Trans)glycosidases
BbuJD1_0167	SSF103088	OmpA-like
BbuJD1_0168	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
BbuJD1_0168	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BbuJD1_0169	SSF50249	Nucleic acid-binding proteins
BbuJD1_0170	SSF48439	Protein prenylyltransferase
BbuJD1_0171	SSF48452	TPR-like
BbuJD1_0172	SSF53300	vWA-like
BbuJD1_0173	SSF53300	vWA-like
BbuJD1_0175	SSF53300	vWA-like
BbuJD1_0176	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0177	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0178	SSF51905	FAD/NAD(P)-binding domain
BbuJD1_0179	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0181	SSF64518	Phase 1 flagellin
BbuJD1_0182	SSF64518	Phase 1 flagellin
BbuJD1_0183	SSF141457	BH3618-like
BbuJD1_0184	SSF117130	CsrA-like
BbuJD1_0185	SSF53067	Actin-like ATPase domain
BbuJD1_0186	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0188	SSF74731	Ribosomal protein L20
BbuJD1_0189	SSF143034	L35p-like
BbuJD1_0190	SSF54364	Translation initiation factor IF3, N-terminal domain
BbuJD1_0190	SSF55200	Translation initiation factor IF3, C-terminal domain
BbuJD1_0194	SSF51556	Metallo-dependent hydrolases
BbuJD1_0195	SSF48452	TPR-like
BbuJD1_0196	SSF75620	Release factor
BbuJD1_0197	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0198	SSF109604	HD-domain/PDEase-like
BbuJD1_0198	SSF81271	TGS-like
BbuJD1_0198	SSF81301	Nucleotidyltransferase
BbuJD1_0200	SSF52440	PreATP-grasp domain
BbuJD1_0200	SSF56059	Glutathione synthetase ATP-binding domain-like
BbuJD1_0201	SSF53244	MurD-like peptide ligases, peptide-binding domain
BbuJD1_0201	SSF53623	MurD-like peptide ligases, catalytic domain
BbuJD1_0201	SSF63418	MurE/MurF N-terminal domain
BbuJD1_0202	SSF54631	CBS-domain pair
BbuJD1_0202	SSF56176	FAD-binding/transporter-associated domain-like
BbuJD1_0203	SSF117892	Band 7/SPFH domain
BbuJD1_0204	SSF117892	Band 7/SPFH domain
BbuJD1_0206	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0207	SSF53448	Nucleotide-diphospho-sugar transferases
BbuJD1_0209	SSF48452	TPR-like
BbuJD1_0210	SSF48452	TPR-like
BbuJD1_0210	SSF81901	HCP-like
BbuJD1_0211	SSF118116	DNA mismatch repair protein MutL
BbuJD1_0211	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0211	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BbuJD1_0214	SSF50104	Translation proteins SH3-like domain
BbuJD1_0214	SSF50249	Nucleic acid-binding proteins
BbuJD1_0215	SSF53850	Periplasmic binding protein-like II
BbuJD1_0216	SSF161098	MetI-like
BbuJD1_0217	SSF161098	MetI-like
BbuJD1_0217	SSF53850	Periplasmic binding protein-like II
BbuJD1_0218	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0220	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
BbuJD1_0220	SSF55186	ThrRS/AlaRS common domain
BbuJD1_0220	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0221	SSF48029	FliG
BbuJD1_0222	SSF100950	NagB/RpiA/CoA transferase-like
BbuJD1_0225	SSF51395	FMN-linked oxidoreductases
BbuJD1_0226	SSF46589	tRNA-binding arm
BbuJD1_0226	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0228	SSF63411	LuxS/MPP-like metallohydrolase
BbuJD1_0229	SSF143800	L28p-like
BbuJD1_0230	SSF50249	Nucleic acid-binding proteins
BbuJD1_0230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0231	SSF51161	Trimeric LpxA-like enzymes
BbuJD1_0232	SSF47729	IHF-like DNA-binding proteins
BbuJD1_0233	SSF46992	Ribosomal protein S20
BbuJD1_0235	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0235	SSF81271	TGS-like
BbuJD1_0236	SSF101898	NHL repeat
BbuJD1_0236	SSF48452	TPR-like
BbuJD1_0236	SSF53300	vWA-like
BbuJD1_0237	SSF56317	Carbon-nitrogen hydrolase
BbuJD1_0239	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0240	SSF81338	Aquaporin-like
BbuJD1_0241	SSF53067	Actin-like ATPase domain
BbuJD1_0243	SSF51905	FAD/NAD(P)-binding domain
BbuJD1_0244	SSF158397	TM1646-like
BbuJD1_0246	SSF51261	Duplicated hybrid motif
BbuJD1_0247	SSF52972	ITPase-like
BbuJD1_0248	SSF55486	Metalloproteases ("zincins"), catalytic domain
BbuJD1_0251	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BbuJD1_0251	SSF50677	ValRS/IleRS/LeuRS editing domain
BbuJD1_0251	SSF52374	Nucleotidylyl transferase
BbuJD1_0252	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BbuJD1_0253	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0253	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0253	SSF88697	PUA domain-like
BbuJD1_0254	SSF64182	DHH phosphoesterases
BbuJD1_0255	SSF51261	Duplicated hybrid motif
BbuJD1_0257	SSF46785	"Winged helix" DNA-binding domain
BbuJD1_0257	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0259	SSF53955	Lysozyme-like
BbuJD1_0261	SSF48452	TPR-like
BbuJD1_0262	SSF51261	Duplicated hybrid motif
BbuJD1_0263	SSF51306	LexA/Signal peptidase
BbuJD1_0264	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
BbuJD1_0264	SSF53067	Actin-like ATPase domain
BbuJD1_0269	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0272	SSF160544	EscU C-terminal domain-like
BbuJD1_0277	SSF101801	Surface presentation of antigens (SPOA)
BbuJD1_0278	SSF101801	Surface presentation of antigens (SPOA)
BbuJD1_0278	SSF103039	CheC-like
BbuJD1_0280	SSF103088	OmpA-like
BbuJD1_0283	SSF117143	Flagellar hook protein flgE
BbuJD1_0288	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0290	SSF48029	FliG
BbuJD1_0295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0296	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
BbuJD1_0297	SSF102405	MCP/YpsA-like
BbuJD1_0298	SSF48452	TPR-like
BbuJD1_0299	SSF52490	Tubulin nucleotide-binding domain-like
BbuJD1_0299	SSF55307	Tubulin C-terminal domain-like
BbuJD1_0300	SSF53067	Actin-like ATPase domain
BbuJD1_0304	SSF53244	MurD-like peptide ligases, peptide-binding domain
BbuJD1_0304	SSF53623	MurD-like peptide ligases, catalytic domain
BbuJD1_0304	SSF63418	MurE/MurF N-terminal domain
BbuJD1_0306	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0306	SSF81799	Putative methyltransferase TM0872, insert domain
BbuJD1_0308	SSF50978	WD40 repeat-like
BbuJD1_0311	SSF111331	NAD kinase/diacylglycerol kinase-like
BbuJD1_0312	SSF50341	CheW-like
BbuJD1_0313	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0314	SSF48576	Terpenoid synthases
BbuJD1_0315	SSF48452	TPR-like
BbuJD1_0318	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0319	SSF53822	Periplasmic binding protein-like I
BbuJD1_0324	SSF48452	TPR-like
BbuJD1_0325	SSF53300	vWA-like
BbuJD1_0326	SSF48452	TPR-like
BbuJD1_0327	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
BbuJD1_0328	SSF53850	Periplasmic binding protein-like II
BbuJD1_0329	SSF53850	Periplasmic binding protein-like II
BbuJD1_0330	SSF53850	Periplasmic binding protein-like II
BbuJD1_0332	SSF161098	MetI-like
BbuJD1_0333	SSF161098	MetI-like
BbuJD1_0334	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0336	SSF81296	E set domains
BbuJD1_0337	SSF51604	Enolase C-terminal domain-like
BbuJD1_0337	SSF54826	Enolase N-terminal domain-like
BbuJD1_0338	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0339	SSF52161	Ribosomal protein L13
BbuJD1_0340	SSF53383	PLP-dependent transferases
BbuJD1_0341	SSF55931	Glutamine synthetase/guanido kinase
BbuJD1_0341	SSF89095	GatB/YqeY motif
BbuJD1_0342	SSF75304	Amidase signature (AS) enzymes
BbuJD1_0343	SSF141000	Glu-tRNAGln amidotransferase C subunit
BbuJD1_0344	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0346	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
BbuJD1_0348	SSF50800	PK beta-barrel domain-like
BbuJD1_0348	SSF51621	Phosphoenolpyruvate/pyruvate domain
BbuJD1_0348	SSF52935	PK C-terminal domain-like
BbuJD1_0350	SSF143800	L28p-like
BbuJD1_0355	SSF141259	CarD-like
BbuJD1_0358	SSF75217	alpha/beta knot
BbuJD1_0358	SSF88697	PUA domain-like
BbuJD1_0359	SSF50156	PDZ domain-like
BbuJD1_0359	SSF52096	ClpP/crotonase
BbuJD1_0361	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0363	SSF141868	EAL domain-like
BbuJD1_0364	SSF52335	Methylglyoxal synthase-like
BbuJD1_0366	SSF101821	Aminopeptidase/glucanase lid domain
BbuJD1_0366	SSF53187	Zn-dependent exopeptidases
BbuJD1_0367	SSF55604	Glucose permease domain IIB
BbuJD1_0368	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BbuJD1_0368	SSF51735	NAD(P)-binding Rossmann-fold domains
BbuJD1_0369	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0370	SSF52374	Nucleotidylyl transferase
BbuJD1_0370	SSF55174	Alpha-L RNA-binding motif
BbuJD1_0371	SSF52954	Class II aaRS ABD-related
BbuJD1_0371	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0372	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
BbuJD1_0372	SSF52374	Nucleotidylyl transferase
BbuJD1_0374	SSF109604	HD-domain/PDEase-like
BbuJD1_0375	SSF53167	Purine and uridine phosphorylases
BbuJD1_0376	SSF55973	S-adenosylmethionine synthetase
BbuJD1_0377	SSF63411	LuxS/MPP-like metallohydrolase
BbuJD1_0379	SSF54197	HIT-like
BbuJD1_0380	SSF158791	MgtE N-terminal domain-like
BbuJD1_0380	SSF161093	MgtE membrane domain-like
BbuJD1_0380	SSF54631	CBS-domain pair
BbuJD1_0381	SSF48208	Six-hairpin glycosidases
BbuJD1_0382	SSF53822	Periplasmic binding protein-like I
BbuJD1_0383	SSF53822	Periplasmic binding protein-like I
BbuJD1_0384	SSF53822	Periplasmic binding protein-like I
BbuJD1_0385	SSF53822	Periplasmic binding protein-like I
BbuJD1_0386	SSF47973	Ribosomal protein S7
BbuJD1_0387	SSF50249	Nucleic acid-binding proteins
BbuJD1_0388	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
BbuJD1_0389	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
BbuJD1_0390	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
BbuJD1_0390	SSF54736	ClpS-like
BbuJD1_0391	SSF160369	Ribosomal protein L10-like
BbuJD1_0392	SSF56808	Ribosomal protein L1
BbuJD1_0393	SSF46906	Ribosomal protein L11, C-terminal domain
BbuJD1_0393	SSF54747	Ribosomal L11/L12e N-terminal domain
BbuJD1_0394	SSF50104	Translation proteins SH3-like domain
BbuJD1_0394	SSF82679	N-utilization substance G protein NusG, N-terminal domain
BbuJD1_0396	SSF57829	Zn-binding ribosomal proteins
BbuJD1_0398	SSF48452	TPR-like
BbuJD1_0399	SSF48403	Ankyrin repeat
BbuJD1_0401	SSF118215	Proton glutamate symport protein
BbuJD1_0402	SSF52954	Class II aaRS ABD-related
BbuJD1_0402	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0402	SSF64586	C-terminal domain of ProRS
BbuJD1_0407	SSF51182	RmlC-like cupins
BbuJD1_0408	SSF52794	PTS system IIB component-like
BbuJD1_0408	SSF55804	Phoshotransferase/anion transport protein
BbuJD1_0411	SSF54060	His-Me finger endonucleases
BbuJD1_0414	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
BbuJD1_0414	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0415	SSF52172	CheY-like
BbuJD1_0415	SSF52738	Methylesterase CheB, C-terminal domain
BbuJD1_0417	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0417	SSF57774	Microbial and mitochondrial ADK, insert "zinc finger" domain
BbuJD1_0419	SSF52172	CheY-like
BbuJD1_0419	SSF55073	Nucleotide cyclase
BbuJD1_0420	SSF47384	Homodimeric domain of signal transducing histidine kinase
BbuJD1_0420	SSF52172	CheY-like
BbuJD1_0420	SSF53850	Periplasmic binding protein-like II
BbuJD1_0420	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BbuJD1_0421	SSF56784	HAD-like
BbuJD1_0422	SSF50486	FMT C-terminal domain-like
BbuJD1_0426	SSF52309	N-(deoxy)ribosyltransferase-like
BbuJD1_0429	SSF53927	Cytidine deaminase-like
BbuJD1_0430	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0431	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0434	SSF109709	KorB DNA-binding domain-like
BbuJD1_0434	SSF110849	ParB/Sulfiredoxin
BbuJD1_0435	SSF101904	GyrA/ParC C-terminal domain-like
BbuJD1_0435	SSF56719	Type II DNA topoisomerase
BbuJD1_0436	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0436	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BbuJD1_0436	SSF56719	Type II DNA topoisomerase
BbuJD1_0437	SSF48295	TrpR-like
BbuJD1_0437	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0438	SSF55979	DNA clamp
BbuJD1_0441	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0443	SSF82708	R3H domain
BbuJD1_0444	SSF51735	NAD(P)-binding Rossmann-fold domains
BbuJD1_0445	SSF51569	Aldolase
BbuJD1_0446	SSF50249	Nucleic acid-binding proteins
BbuJD1_0446	SSF55261	GAD domain-like
BbuJD1_0446	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0447	SSF55804	Phoshotransferase/anion transport protein
BbuJD1_0448	SSF55594	HPr-like
BbuJD1_0449	SSF69754	Ribosome binding protein Y (YfiA homologue)
BbuJD1_0453	SSF50182	Sm-like ribonucleoproteins
BbuJD1_0453	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
BbuJD1_0453	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
BbuJD1_0454	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BbuJD1_0455	SSF48019	post-AAA+ oligomerization domain-like
BbuJD1_0457	SSF47781	RuvA domain 2-like
BbuJD1_0457	SSF82771	GIY-YIG endonuclease
BbuJD1_0458	SSF49265	Fibronectin type III
BbuJD1_0458	SSF49899	Concanavalin A-like lectins/glucanases
BbuJD1_0459	SSF48452	TPR-like
BbuJD1_0461	SSF48019	post-AAA+ oligomerization domain-like
BbuJD1_0461	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0462	SSF82607	YbaB-like
BbuJD1_0463	SSF54919	Nucleoside diphosphate kinase, NDK
BbuJD1_0466	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0467	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
BbuJD1_0468	SSF102705	NIF3 (NGG1p interacting factor 3)-like
BbuJD1_0471	SSF56300	Metallo-dependent phosphatases
BbuJD1_0472	SSF55205	EPT/RTPC-like
BbuJD1_0476	SSF50447	Translation proteins
BbuJD1_0476	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
BbuJD1_0476	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0477	SSF54999	Ribosomal protein S10
BbuJD1_0478	SSF50447	Translation proteins
BbuJD1_0479	SSF52166	Ribosomal protein L4
BbuJD1_0480	SSF54189	Ribosomal proteins S24e, L23 and L15e
BbuJD1_0481	SSF50104	Translation proteins SH3-like domain
BbuJD1_0481	SSF50249	Nucleic acid-binding proteins
BbuJD1_0482	SSF54570	Ribosomal protein S19
BbuJD1_0483	SSF54843	Ribosomal protein L22
BbuJD1_0484	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BbuJD1_0484	SSF54821	Ribosomal protein S3 C-terminal domain
BbuJD1_0485	SSF54686	Ribosomal protein L16p/L10e
BbuJD1_0486	SSF46561	Ribosomal protein L29 (L29p)
BbuJD1_0487	SSF50249	Nucleic acid-binding proteins
BbuJD1_0488	SSF50193	Ribosomal protein L14
BbuJD1_0489	SSF50104	Translation proteins SH3-like domain
BbuJD1_0490	SSF55282	RL5-like
BbuJD1_0491	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
BbuJD1_0492	SSF56047	Ribosomal protein S8
BbuJD1_0493	SSF56053	Ribosomal protein L6
BbuJD1_0494	SSF53137	Translational machinery components
BbuJD1_0495	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0495	SSF54768	dsRNA-binding domain-like
BbuJD1_0496	SSF55129	Ribosomal protein L30p/L7e
BbuJD1_0497	SSF52080	Ribosomal proteins L15p and L18e
BbuJD1_0498	SSF103491	Preprotein translocase SecY subunit
BbuJD1_0499	SSF57840	Ribosomal protein L36
BbuJD1_0500	SSF46946	S13-like H2TH domain
BbuJD1_0501	SSF53137	Translational machinery components
BbuJD1_0502	SSF47789	C-terminal domain of RNA polymerase alpha subunit
BbuJD1_0502	SSF55257	RBP11-like subunits of RNA polymerase
BbuJD1_0502	SSF56553	Insert subdomain of RNA polymerase alpha subunit
BbuJD1_0503	SSF64263	Prokaryotic ribosomal protein L17
BbuJD1_0504	SSF109604	HD-domain/PDEase-like
BbuJD1_0504	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
BbuJD1_0505	SSF56300	Metallo-dependent phosphatases
BbuJD1_0506	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0508	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0511	SSF56784	HAD-like
BbuJD1_0512	SSF58113	Apolipoprotein A-I
BbuJD1_0513	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0514	SSF46955	Putative DNA-binding domain
BbuJD1_0514	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0515	SSF51905	FAD/NAD(P)-binding domain
BbuJD1_0516	SSF55315	L30e-like
BbuJD1_0516	SSF75217	alpha/beta knot
BbuJD1_0517	SSF46565	Chaperone J-domain
BbuJD1_0517	SSF49493	HSP40/DnaJ peptide-binding domain
BbuJD1_0517	SSF57938	DnaJ/Hsp40 cysteine-rich domain
BbuJD1_0518	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
BbuJD1_0518	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
BbuJD1_0518	SSF53067	Actin-like ATPase domain
BbuJD1_0519	SSF51064	Head domain of nucleotide exchange factor GrpE
BbuJD1_0519	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
BbuJD1_052	SSF75217	alpha/beta knot
BbuJD1_0522	SSF52402	Adenine nucleotide alpha hydrolases-like
BbuJD1_0522	SSF56317	Carbon-nitrogen hydrolase
BbuJD1_0527	SSF53067	Actin-like ATPase domain
BbuJD1_0528	SSF51430	NAD(P)-linked oxidoreductase
BbuJD1_0533	SSF56281	Metallo-hydrolase/oxidoreductase
BbuJD1_0534	SSF56219	DNase I-like
BbuJD1_0536	SSF63411	LuxS/MPP-like metallohydrolase
BbuJD1_0537	SSF48452	TPR-like
BbuJD1_0540	SSF50447	Translation proteins
BbuJD1_0540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0540	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0540	SSF54980	EF-G C-terminal domain-like
BbuJD1_0542	SSF48452	TPR-like
BbuJD1_0544	SSF53271	PRTase-like
BbuJD1_0545	SSF53067	Actin-like ATPase domain
BbuJD1_0546	SSF110997	Sporulation related repeat
BbuJD1_0547	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0548	SSF47807	5' to 3' exonuclease, C-terminal subdomain
BbuJD1_0548	SSF53098	Ribonuclease H-like
BbuJD1_0548	SSF56672	DNA/RNA polymerases
BbuJD1_0548	SSF88723	PIN domain-like
BbuJD1_0550	SSF101116	Flagellar export chaperone FliS
BbuJD1_0551	SSF52172	CheY-like
BbuJD1_0552	SSF47781	RuvA domain 2-like
BbuJD1_0552	SSF50249	Nucleic acid-binding proteins
BbuJD1_0552	SSF52113	BRCT domain
BbuJD1_0552	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
BbuJD1_0557	SSF55594	HPr-like
BbuJD1_0558	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
BbuJD1_0558	SSF51621	Phosphoenolpyruvate/pyruvate domain
BbuJD1_0558	SSF52009	Phosphohistidine domain
BbuJD1_0559	SSF51261	Duplicated hybrid motif
BbuJD1_0560	SSF110942	HSP90 C-terminal domain
BbuJD1_0560	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0560	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BbuJD1_0561	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
BbuJD1_0561	SSF51735	NAD(P)-binding Rossmann-fold domains
BbuJD1_0565	SSF50341	CheW-like
BbuJD1_0566	SSF52091	SpoIIaa-like
BbuJD1_0567	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BbuJD1_0567	SSF47384	Homodimeric domain of signal transducing histidine kinase
BbuJD1_0567	SSF50341	CheW-like
BbuJD1_0567	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BbuJD1_0568	SSF52738	Methylesterase CheB, C-terminal domain
BbuJD1_0569	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BbuJD1_0570	SSF52172	CheY-like
BbuJD1_0571	SSF53633	Carbamate kinase-like
BbuJD1_0572	SSF53448	Nucleotide-diphospho-sugar transferases
BbuJD1_0573	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0575	SSF52317	Class I glutamine amidotransferase-like
BbuJD1_0575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0578	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BbuJD1_0579	SSF89550	PHP domain-like
BbuJD1_0581	SSF50249	Nucleic acid-binding proteins
BbuJD1_0581	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0582	SSF55166	Hedgehog/DD-peptidase
BbuJD1_0585	SSF51984	MurCD N-terminal domain
BbuJD1_0585	SSF53244	MurD-like peptide ligases, peptide-binding domain
BbuJD1_0585	SSF53623	MurD-like peptide ligases, catalytic domain
BbuJD1_0586	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BbuJD1_0587	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BbuJD1_0587	SSF50249	Nucleic acid-binding proteins
BbuJD1_0587	SSF52374	Nucleotidylyl transferase
BbuJD1_0587	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
BbuJD1_0588	SSF53167	Purine and uridine phosphorylases
BbuJD1_0589	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
BbuJD1_0590	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0593	SSF56801	Acetyl-CoA synthetase-like
BbuJD1_0594	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BbuJD1_0594	SSF52374	Nucleotidylyl transferase
BbuJD1_0594	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
BbuJD1_0596	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BbuJD1_0597	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BbuJD1_0598	SSF56176	FAD-binding/transporter-associated domain-like
BbuJD1_0598	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
BbuJD1_0599	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BbuJD1_0599	SSF52374	Nucleotidylyl transferase
BbuJD1_0600	SSF54001	Cysteine proteinases
BbuJD1_0600	SSF81296	E set domains
BbuJD1_0601	SSF53383	PLP-dependent transferases
BbuJD1_0602	SSF46565	Chaperone J-domain
BbuJD1_0605	SSF56601	beta-lactamase/transpeptidase-like
BbuJD1_0605	SSF69189	Penicillin-binding protein associated domain
BbuJD1_0606	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
BbuJD1_0607	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0608	SSF53187	Zn-dependent exopeptidases
BbuJD1_0610	SSF102735	Trigger factor ribosome-binding domain
BbuJD1_0610	SSF109998	Triger factor/SurA peptide-binding domain-like
BbuJD1_0610	SSF54534	FKBP-like
BbuJD1_0611	SSF52096	ClpP/crotonase
BbuJD1_0612	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0613	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0613	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0613	SSF88697	PUA domain-like
BbuJD1_0615	SSF55174	Alpha-L RNA-binding motif
BbuJD1_0616	SSF161111	Cation efflux protein transmembrane domain-like
BbuJD1_0616	SSF55729	Acyl-CoA N-acyltransferases (Nat)
BbuJD1_0618	SSF53927	Cytidine deaminase-like
BbuJD1_0619	SSF64182	DHH phosphoesterases
BbuJD1_0620	SSF51445	(Trans)glycosidases
BbuJD1_0621	SSF52317	Class I glutamine amidotransferase-like
BbuJD1_0622	SSF53067	Actin-like ATPase domain
BbuJD1_0623	SSF141259	CarD-like
BbuJD1_0623	SSF143517	TRCF domain-like
BbuJD1_0623	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0625	SSF53187	Zn-dependent exopeptidases
BbuJD1_0625	SSF54106	LysM domain
BbuJD1_0626	SSF110455	Toprim domain
BbuJD1_0627	SSF101821	Aminopeptidase/glucanase lid domain
BbuJD1_0627	SSF53187	Zn-dependent exopeptidases
BbuJD1_0629	SSF52794	PTS system IIB component-like
BbuJD1_0629	SSF55804	Phoshotransferase/anion transport protein
BbuJD1_0630	SSF53613	Ribokinase-like
BbuJD1_0632	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0633	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0633	SSF52980	Restriction endonuclease-like
BbuJD1_0634	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0635	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
BbuJD1_0635	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
BbuJD1_0636	SSF51735	NAD(P)-binding Rossmann-fold domains
BbuJD1_0636	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
BbuJD1_0639	SSF53850	Periplasmic binding protein-like II
BbuJD1_0640	SSF161098	MetI-like
BbuJD1_0641	SSF161098	MetI-like
BbuJD1_0642	SSF50331	MOP-like
BbuJD1_0642	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0643	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0644	SSF51366	Ribulose-phoshate binding barrel
BbuJD1_0645	SSF55604	Glucose permease domain IIB
BbuJD1_0646	SSF53474	alpha/beta-Hydrolases
BbuJD1_0647	SSF46785	"Winged helix" DNA-binding domain
BbuJD1_0649	SSF48592	GroEL equatorial domain-like
BbuJD1_0649	SSF52029	GroEL apical domain-like
BbuJD1_0649	SSF54849	GroEL-intermediate domain like
BbuJD1_0652	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BbuJD1_0653	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
BbuJD1_0655	SSF46565	Chaperone J-domain
BbuJD1_0655	SSF49493	HSP40/DnaJ peptide-binding domain
BbuJD1_0656	SSF102114	Radical SAM enzymes
BbuJD1_0657	SSF100950	NagB/RpiA/CoA transferase-like
BbuJD1_0657	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
BbuJD1_0658	SSF53254	Phosphoglycerate mutase-like
BbuJD1_0659	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
BbuJD1_0659	SSF52374	Nucleotidylyl transferase
BbuJD1_0660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0660	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BbuJD1_0665	SSF53448	Nucleotide-diphospho-sugar transferases
BbuJD1_0666	SSF53187	Zn-dependent exopeptidases
BbuJD1_0669	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
BbuJD1_0669	SSF50341	CheW-like
BbuJD1_0669	SSF55052	CheY-binding domain of CheA
BbuJD1_0669	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BbuJD1_0670	SSF50341	CheW-like
BbuJD1_0670	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
BbuJD1_0671	SSF103039	CheC-like
BbuJD1_0672	SSF52172	CheY-like
BbuJD1_0676	SSF56784	HAD-like
BbuJD1_0677	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0680	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BbuJD1_0681	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
BbuJD1_0682	SSF52402	Adenine nucleotide alpha hydrolases-like
BbuJD1_0683	SSF53901	Thiolase-like
BbuJD1_0684	SSF51395	FMN-linked oxidoreductases
BbuJD1_0685	SSF55035	NAD-binding domain of HMG-CoA reductase
BbuJD1_0685	SSF56542	Substrate-binding domain of HMG-CoA reductase
BbuJD1_0686	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0686	SSF55060	GHMP Kinase, C-terminal domain
BbuJD1_0687	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0688	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0688	SSF55060	GHMP Kinase, C-terminal domain
BbuJD1_0689	SSF55797	PR-1-like
BbuJD1_0690	SSF47240	Ferritin-like
BbuJD1_0691	SSF50447	Translation proteins
BbuJD1_0691	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0691	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0691	SSF54980	EF-G C-terminal domain-like
BbuJD1_0693	SSF46785	"Winged helix" DNA-binding domain
BbuJD1_0693	SSF53067	Actin-like ATPase domain
BbuJD1_0694	SSF47364	Domain of the SRP/SRP receptor G-proteins
BbuJD1_0694	SSF47446	Signal peptide-binding domain
BbuJD1_0694	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0695	SSF54565	Ribosomal protein S16
BbuJD1_0696	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BbuJD1_0697	SSF50346	PRC-barrel domain
BbuJD1_0697	SSF50447	Translation proteins
BbuJD1_0698	SSF75217	alpha/beta knot
BbuJD1_0699	SSF50104	Translation proteins SH3-like domain
BbuJD1_0702	SSF52374	Nucleotidylyl transferase
BbuJD1_0703	SSF57829	Zn-binding ribosomal proteins
BbuJD1_0704	SSF47336	ACP-like
BbuJD1_0705	SSF54768	dsRNA-binding domain-like
BbuJD1_0705	SSF69065	RNase III domain-like
BbuJD1_0706	SSF81301	Nucleotidyltransferase
BbuJD1_0706	SSF81891	Poly A polymerase C-terminal region-like
BbuJD1_0710	SSF56731	DNA primase core
BbuJD1_0710	SSF57783	Zinc beta-ribbon
BbuJD1_0712	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BbuJD1_0712	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BbuJD1_0714	SSF81901	HCP-like
BbuJD1_0715	SSF53067	Actin-like ATPase domain
BbuJD1_0718	SSF56519	Penicillin binding protein dimerisation domain
BbuJD1_0718	SSF56601	beta-lactamase/transpeptidase-like
BbuJD1_0720	SSF52954	Class II aaRS ABD-related
BbuJD1_0720	SSF55186	ThrRS/AlaRS common domain
BbuJD1_0720	SSF55681	Class II aaRS and biotin synthetases
BbuJD1_0723	SSF55154	CYTH-like phosphatases
BbuJD1_0725	SSF116726	TrkA C-terminal domain-like
BbuJD1_0725	SSF51735	NAD(P)-binding Rossmann-fold domains
BbuJD1_0726	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0727	SSF53784	Phosphofructokinase
BbuJD1_0728	SSF51905	FAD/NAD(P)-binding domain
BbuJD1_0728	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
BbuJD1_0729	SSF118215	Proton glutamate symport protein
BbuJD1_0730	SSF53697	SIS domain
BbuJD1_0731	SSF110849	ParB/Sulfiredoxin
BbuJD1_0732	SSF53955	Lysozyme-like
BbuJD1_0732	SSF56601	beta-lactamase/transpeptidase-like
BbuJD1_0734	SSF55821	YrdC/RibB
BbuJD1_0735	SSF110997	Sporulation related repeat
BbuJD1_0735	SSF50685	Barwin-like endoglucanases
BbuJD1_0737	SSF51395	FMN-linked oxidoreductases
BbuJD1_0738	SSF46589	tRNA-binding arm
BbuJD1_0738	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BbuJD1_0738	SSF50677	ValRS/IleRS/LeuRS editing domain
BbuJD1_0738	SSF52374	Nucleotidylyl transferase
BbuJD1_0741	SSF50129	GroES-like
BbuJD1_0742	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0743	SSF50998	Quinoprotein alcohol dehydrogenase-like
BbuJD1_0745	SSF48150	DNA-glycosylase
BbuJD1_0746	SSF161098	MetI-like
BbuJD1_0747	SSF161098	MetI-like
BbuJD1_0754	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0755	SSF56281	Metallo-hydrolase/oxidoreductase
BbuJD1_0756	SSF51905	FAD/NAD(P)-binding domain
BbuJD1_0757	SSF52096	ClpP/crotonase
BbuJD1_0760	SSF101386	all-alpha NTP pyrophosphatases
BbuJD1_0761	SSF51261	Duplicated hybrid motif
BbuJD1_0763	SSF46689	Homeodomain-like
BbuJD1_0763	SSF52172	CheY-like
BbuJD1_0763	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0764	SSF47384	Homodimeric domain of signal transducing histidine kinase
BbuJD1_0764	SSF55785	PYP-like sensor domain (PAS domain)
BbuJD1_0764	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
BbuJD1_0765	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0767	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
BbuJD1_0768	SSF53613	Ribokinase-like
BbuJD1_0769	SSF53067	Actin-like ATPase domain
BbuJD1_0770	SSF88713	Glycoside hydrolase/deacetylase
BbuJD1_0771	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
BbuJD1_0771	SSF88946	Sigma2 domain of RNA polymerase sigma factors
BbuJD1_0774	SSF117143	Flagellar hook protein flgE
BbuJD1_0775	SSF117143	Flagellar hook protein flgE
BbuJD1_0777	SSF53271	PRTase-like
BbuJD1_0778	SSF141091	L21p-like
BbuJD1_0779	SSF118010	TM1457-like
BbuJD1_0780	SSF110324	Ribosomal L27 protein-like
BbuJD1_0781	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0781	SSF82051	Obg GTP-binding protein N-terminal domain
BbuJD1_0782	SSF52374	Nucleotidylyl transferase
BbuJD1_0784	SSF81301	Nucleotidyltransferase
BbuJD1_0785	SSF160537	SpoVG-like
BbuJD1_0786	SSF50715	Ribosomal protein L25-like
BbuJD1_0787	SSF53178	Peptidyl-tRNA hydrolase-like
BbuJD1_0788	SSF52402	Adenine nucleotide alpha hydrolases-like
BbuJD1_0789	SSF140990	FtsH protease domain-like
BbuJD1_0789	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0793	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0796	SSF111384	OmpH-like
BbuJD1_0797	SSF48334	DNA repair protein MutS, domain III
BbuJD1_0797	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0797	SSF53150	DNA repair protein MutS, domain II
BbuJD1_0797	SSF55271	DNA repair protein MutS, domain I
BbuJD1_0798	SSF53271	PRTase-like
BbuJD1_0800	SSF50249	Nucleic acid-binding proteins
BbuJD1_0800	SSF54814	Prokaryotic type KH domain (KH-domain type II)
BbuJD1_0800	SSF69705	Transcription factor NusA, N-terminal domain
BbuJD1_0801	SSF50447	Translation proteins
BbuJD1_0801	SSF52156	Initiation factor IF2/eIF5b, domain 3
BbuJD1_0801	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0802	SSF89919	Ribosome-binding factor A, RbfA
BbuJD1_0803	SSF55120	Pseudouridine synthase
BbuJD1_0804	SSF47060	S15/NS1 RNA-binding domain
BbuJD1_0805	SSF50249	Nucleic acid-binding proteins
BbuJD1_0805	SSF54211	Ribosomal protein S5 domain 2-like
BbuJD1_0805	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
BbuJD1_0805	SSF55666	Ribonuclease PH domain 2-like
BbuJD1_0806	SSF50998	Quinoprotein alcohol dehydrogenase-like
BbuJD1_0809	SSF51713	tRNA-guanine transglycosylase
BbuJD1_0811	SSF48371	ARM repeat
BbuJD1_0812	SSF102645	CoaB-like
BbuJD1_0812	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
BbuJD1_0815	SSF55120	Pseudouridine synthase
BbuJD1_0816	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0817	SSF51984	MurCD N-terminal domain
BbuJD1_0817	SSF53244	MurD-like peptide ligases, peptide-binding domain
BbuJD1_0817	SSF53623	MurD-like peptide ligases, catalytic domain
BbuJD1_0819	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0820	SSF63562	RPB6/omega subunit-like
BbuJD1_0821	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0827	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0828	SSF56712	Prokaryotic type I DNA topoisomerase
BbuJD1_0829	SSF56300	Metallo-dependent phosphatases
BbuJD1_0830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0831	SSF53067	Actin-like ATPase domain
BbuJD1_0833	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
BbuJD1_0833	SSF50677	ValRS/IleRS/LeuRS editing domain
BbuJD1_0833	SSF52374	Nucleotidylyl transferase
BbuJD1_0834	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0835	SSF53738	Phosphoglucomutase, first 3 domains
BbuJD1_0835	SSF55957	Phosphoglucomutase, C-terminal domain
BbuJD1_0836	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0837	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0839	SSF53098	Ribonuclease H-like
BbuJD1_0841	SSF55909	Pentein
BbuJD1_0842	SSF53671	Aspartate/ornithine carbamoyltransferase
BbuJD1_0902	SSF52540	P-loop containing nucleoside triphosphate hydrolases
BbuJD1_0905	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases