LOCUS       NC_017809               5850 bp    DNA     linear   CON 11-JUN-2013
DEFINITION  Borrelia crocidurae str. Achema plasmid unnamed, complete sequence.
ACCESSION   NC_017809
VERSION     NC_017809.1  GI:386858947
DBLINK      Project: 162335
            BioProject: PRJNA162335
KEYWORDS    .
SOURCE      Borrelia crocidurae str. Achema
  ORGANISM  Borrelia crocidurae str. Achema
            Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Borrelia.
REFERENCE   1  (bases 1 to 5850)
  AUTHORS   Elbir,H., Gimenez,G., Robert,C., Bergstrom,S., Cutler,S., Raoult,D.
            and Drancourt,M.
  TITLE     Complete Genome Sequence of Borrelia crocidurae
  JOURNAL   J. Bacteriol. 194 (14), 3723-3724 (2012)
   PUBMED   22740657
REFERENCE   2  (bases 1 to 5850)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (27-APR-2012) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 5850)
  AUTHORS   Elbir,H., Gimenez,G., Robert,C., Raoult,D. and Drancourt,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAR-2012) URMITE, 27 Boulevard Jean Moulin,
            Marseille, France
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to CP003429.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5850
                     /organism="Borrelia crocidurae str. Achema"
                     /mol_type="genomic DNA"
                     /strain="Achema"
                     /host="Homo sapiens"
                     /db_xref="taxon:1155096"
                     /clone="21"
                     /plasmid="unnamed"
                     /country="Senegal"
     gene            <1..846
                     /locus_tag="Q7M_1531"
                     /db_xref="GeneID:12828054"
     CDS             <1..846
                     /locus_tag="Q7M_1531"
                     /codon_start=1
                     /transl_table=11
                     /product="Vlp protein, delta subfamily"
                     /protein_id="YP_006272797.1"
                     /db_xref="GI:386858948"
                     /db_xref="GeneID:12828054"
                     /translation="KEDIGKYFSDIEKTMISVKEKLQEEVSKNGQYEKVKKVVEEFIS
                     GTVDKIAAGAKEAALGASGGGSEAVGNAKANEDAKPAEVASVNKLVKGIKEIVEIVLK
                     GRGDAGADFTKGESKKDVGKLFTTTDADRADNAAAQAAAASIGAINGVDMLQAIAKSS
                     ENPTVNEAEGIEKAEDAAGIAVAKAVAGKKEIKVDSAKKDAVIAGGIALRGMTKGGKF
                     SIKNNENDAVKTVNGAVAGAVNKVLSTLTIAIRNRVDLGLKEINKVLGEIKQGEGSES
                     KVKAN"
     misc_feature    277..795
                     /locus_tag="Q7M_1531"
                     /note="Borrelia lipoprotein; Region: Lipoprotein_2;
                     pfam00921"
                     /db_xref="CDD:216193"
     gene            1988..2617
                     /locus_tag="Q7M_1532"
                     /db_xref="GeneID:12828049"
     CDS             1988..2617
                     /locus_tag="Q7M_1532"
                     /note="Borrelia lipoprotein as predicted by PFAM
                     (PF00921.11)"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_006272798.1"
                     /db_xref="GI:386858949"
                     /db_xref="GeneID:12828049"
                     /translation="MAAAGSGGVAGDGVEKIVKGIKGIVEVVLKGVGKADAGDSNKAS
                     DGAARTANAGDGEAGKLFATGNGPAGDQANSKKVATDAAKAVGGVRGSDILQVMVKEN
                     SDATTLAKNSSEQVVGADKVDAVIAGGIALRAMSKGGKFANGTAGNDVSAAVKGAAVS
                     AVTKALDTLTVAIRKTIDLGLKNVKDSMRINSNATPVVSDKDASGAKNQ"
     misc_feature    2096..2551
                     /locus_tag="Q7M_1532"
                     /note="Borrelia lipoprotein; Region: Lipoprotein_2;
                     pfam00921"
                     /db_xref="CDD:216193"
     gene            2803..3885
                     /locus_tag="Q7M_1533"
                     /db_xref="GeneID:12828050"
     CDS             2803..3885
                     /locus_tag="Q7M_1533"
                     /codon_start=1
                     /transl_table=11
                     /product="VmpP protein"
                     /protein_id="YP_006272799.1"
                     /db_xref="GI:386858950"
                     /db_xref="GeneID:12828050"
                     /translation="MQIKKAERIKGIILMMMIVMGCNSGGVKGEGQVGGGGDGRGLSG
                     AMMEVGRSAENAFYAFLELVSDVLGFTAKVETKKNEVGNYFDSLGKKLGDASKELEEV
                     VRKSETDTNKGDLSKNPIREVINVAKGILGTLKGHLESLKSIGDGTIVGEAATNKEGV
                     EPDDIELKKAYNALKGIVDIAYKEGVAKPEAGDMAVKVGNADNKDGAKILSTNAAGKP
                     AAGDIGKAAAILTTVGGKEMLASIVKSTEGDAKLSAAASAQTTAMSFARGNTGDHLAN
                     EAVKAAAVAGGIALRSLVKTGKLASGGADKAQGGKEEVQAVGISAANKLLVAVEDIVK
                     KTVKNVLEKVKQEVDKIRVPKSAVSE"
     misc_feature    3322..3849
                     /locus_tag="Q7M_1533"
                     /note="Borrelia lipoprotein; Region: Lipoprotein_2;
                     pfam00921"
                     /db_xref="CDD:216193"
     gene            4220..4333
                     /locus_tag="Q7M_1534"
                     /db_xref="GeneID:12828051"
     CDS             4220..4333
                     /locus_tag="Q7M_1534"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_006272800.1"
                     /db_xref="GI:386858951"
                     /db_xref="GeneID:12828051"
                     /translation="MVMMVVGCNNVEVQGEESKGIYENRLLKLLVGLSSEF"
     gene            4440..5243
                     /locus_tag="Q7M_1535"
                     /db_xref="GeneID:12828052"
     CDS             4440..5243
                     /locus_tag="Q7M_1535"
                     /codon_start=1
                     /transl_table=11
                     /product="Vlp protein, gamma subfamily"
                     /protein_id="YP_006272801.1"
                     /db_xref="GI:386858952"
                     /db_xref="GeneID:12828052"
                     /translation="MQVIKDGLNKIVAEMKEERNPNAEATETVVKTLVESKLDKIIAG
                     AKIVGEAIDTVGSDLLGNFASQGSGGVVGIEVEKLVKGIKDIVDIVLKEGKHDAGNDK
                     KASDGSTSRTANGGTDEAGKLFGTTSNSGVGAAAGDAKKVATDASKAVGAVTGADILQ
                     AIVKSGDAAAAGAKDATIAGAIALRAIVKDGKFPGVTATAAADNLDYTAVVKGAAVSA
                     VSKALDVLTIAIRSTIDEGLKKVKEAIKINANATATPVMSDKGNSVSKN"
     gene            5542..>5850
                     /locus_tag="Q7M_1536"
                     /db_xref="GeneID:12828053"
     CDS             5542..>5850
                     /locus_tag="Q7M_1536"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="YP_006272802.1"
                     /db_xref="GI:386858953"
                     /db_xref="GeneID:12828053"
                     /translation="MRKNLFILLILGLVSCNLDSKLLDNKGRPDNFLKDVVNNVQGDE
                     PIKEDVVNKVFVEKVVRGDSVIKDEKGELISALINDINSVMGLLNQDKAEVEDANQYG
                     M"
ORIGIN      
        1 aaggaagata tagggaagta ttttagtgat attgagaaga ctatgatttc agtaaaggaa
       61 aagttgcaag aagaagtatc aaagaatggg caatatgaga aagttaagaa ggtagttgag
      121 gagtttatta gtggtactgt agataagata gctgcaggag cgaaggaagc agctttggga
      181 gctagtggtg gaggtagtga agctgtgggg aatgctaagg caaatgaaga cgctaaacca
      241 gcagaagtag caagtgttaa taaattagta aaaggaatta aagagatagt tgaaattgtt
      301 ttaaaaggga ggggagatgc aggtgctgat tttactaaag gtgaaagtaa gaaagatgtt
      361 ggtaagttgt ttactactac tgatgctgat agagctgata atgcggcagc ccaagcagca
      421 gcagcaagta taggagctat aaatggagtt gatatgttgc aagcgatagc taaatctagt
      481 gaaaatccta ctgttaatga ggctgaggga attgagaaag ctgaagatgc agcaggaatt
      541 gcagttgcta aagctgttgc tggtaagaaa gaaattaaag tagattcagc aaaaaaagat
      601 gcagtaatag cgggaggaat agcacttaga ggtatgacta aaggaggtaa attttccatt
      661 aagaataatg aaaatgatgc agttaagaca gtaaatggtg cagtagcagg tgcagtgaat
      721 aaggtgttaa gtacattgac aatagcaatc aggaatagag tggatttggg attaaaagag
      781 ataaataagg tattaggaga gattaagcaa ggagagggtt ctgaatctaa agttaaggct
      841 aattaatagg tgaattagta tatataagtt tatgtaataa ttattaggta aaaaggctag
      901 tagagagcgc gcaataaagc tctctttttt tatttgcagt attaaatcat tttttttctt
      961 ctaatccttt aaagannnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1021 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1081 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1141 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1261 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1441 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1501 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1621 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1681 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1741 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1801 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1861 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
     1921 nnnnnnnnnn nnnnnnnnnn nnnnaagtga ggcaattggt attgcaggtg atgaactact
     1981 tggtaatgtg gctgctgctg gttctggtgg tgttgcaggt gatggggttg agaagatagt
     2041 gaaaggaatt aaaggaatag tagaagtagt acttaaaggt gtagggaagg ccgatgcagg
     2101 ggattctaat aaggctagtg atggtgctgc aagaactgct aatgctgggg atggagaagc
     2161 aggaaaatta tttgctactg gtaatggtcc tgctggtgat caagctaatt caaagaaagt
     2221 tgcaacagat gcagcaaaag ccgtaggagg ggtaagagga tcagatatat tgcaagttat
     2281 ggttaaagaa aatagtgatg ctactacatt ggctaagaat agttctgagc aagttgttgg
     2341 tgctgataaa gtagatgcag ttatagcggg aggtatagca ctgcgagcga tgtcaaaagg
     2401 tggtaaattt gctaatggta ctgctggtaa tgatgtttca gctgcagtta aaggagcagc
     2461 agtaagtgca gtaactaagg ctttagatac attgacagtg gcaataagga aaacaataga
     2521 cttggggctt aagaatgtta aggattctat gaggattaat tctaatgcta ctcctgttgt
     2581 gtctgataag gatgcttctg gtgctaaaaa ccaatagtct aataataatg atatgactaa
     2641 ataataaaat gagataaata aaattataac ggtaagatac taagagttag atgcttagta
     2701 tctttttttt attatgttaa ataaatattt attattttgt tgtcatttgt ttttcattat
     2761 tcatttgttt gttgcttatt agtttttata ggtaaaagta ggatgcaaat aaaaaaagca
     2821 gaaagaataa aaggaataat attgatgatg atgatagtga tgggatgtaa tagtgggggg
     2881 gtgaaaggag aagggcaagt aggaggagga ggagatggga gaggattaag tggagcaatg
     2941 atggaagtag ggaggagtgc agagaatgca ttttatgcat ttttagaatt ggtgtcggat
     3001 gtattgggat ttactgcgaa agttgaaaca aagaagaatg aggtaggaaa ttattttgat
     3061 agtctaggta agaagcttgg agatgcttca aaagagttag aagaggttgt acgaaaatca
     3121 gagacagata ctaataaagg tgatttatca aaaaatccaa ttagagaagt aattaatgta
     3181 gctaagggta ttttaggtac gttaaaaggg catttagagt cattaaaaag tataggtgat
     3241 ggtactatag taggtgaggc agcaaccaat aaagagggag tagaaccaga tgatattgaa
     3301 ttgaaaaaag catataatgc attgaaagga atagtggata tagcttataa agaaggtgtt
     3361 gcaaagccag aagcaggaga catggcagta aaagtaggta atgcagataa taaggatgga
     3421 gctaaaatat tatctacaaa tgctgctggc aaaccagcag caggagatat aggaaaagca
     3481 gcagcaatat taacaacagt gggtggtaag gaaatgttgg catcaatagt taaatcaaca
     3541 gagggggatg caaagctaag cgcagctgct agtgcacaaa caactgctat gagtttcgca
     3601 agaggaaata ctggagatca tttggcaaat gaggcagtta aagcagcagc agttgcaggg
     3661 ggaatagcat tacgttcatt agttaagaca ggtaaattag catcaggagg agcagataag
     3721 gcacaaggag gaaaagaaga agtacaagca gtaggaataa gtgcggcaaa taaattgtta
     3781 gtagccgtag aagatatagt taaaaagaca gtaaagaatg tacttgaaaa agtaaagcaa
     3841 gaagtagata aaataagagt accaaaatca gcagtttcag agtaaagtca tcaataagat
     3901 gataagatat atttaaatta gtttttaata aagtaaattt atgtaaagga aacacttctc
     3961 ttgttctttg ttagatatat agaagaggtg ttttctattt aatttaggca gtttgatata
     4021 tttcctttat attttgtatt gagtattaat ttatcatttg tgtgtttttt tattcatttt
     4081 ttcttgattt agctgttgtg ttaatccttg aagtagcaag taatctttgt aaaagaagag
     4141 aactttctga aaaaaaggga aaggagagat aagaagagag ggaataagaa ggaatggagt
     4201 aaagggagtg atgataggga tggttatgat ggtggtggga tgtaataatg tagaagtaca
     4261 aggggaagag agtaaaggaa tttatgagaa taggttattg aagttattgg tgggattaag
     4321 tagtgaattt taaatgtttt cacgtcattt gaggaaatag tagggaatgt gttgggattg
     4381 aatgttaatt caaagaagtc agatgtaggg aaatatttta agacagtgtg gcgggtactg
     4441 tgcaagtgat aaaggatgga cttaataaaa ttgttgctga aatgaaggaa gaaaggaatc
     4501 caaatgcaga ggctactgag actgtggtga aaacattagt tgagagtaag ctagataaga
     4561 taatagctgg agcaaagatt gttggtgaag ctattgatac tgtgggtagt gacttacttg
     4621 gtaattttgc tagtcagggt tctggtggtg ttgtaggtat tgaagttgag aagttagtaa
     4681 agggaattaa agatatagta gatatagttc ttaaagaagg gaaacatgat gctggtaatg
     4741 ataagaaggc tagtgatggt tctacttcaa gaaccgcaaa tggtggtact gatgaggcag
     4801 gaaagttgtt tggtactact tctaatagtg gagttggtgc tgcagctggt gatgctaaaa
     4861 aggtagcgac tgatgcatct aaagccgttg gtgcagtaac cggggctgat attctacaag
     4921 ctatagttaa aagtggtgat gctgctgcag ctggtgctaa agatgcaact atagcaggag
     4981 ctatagcatt aagagcaatt gtaaaagatg gtaaatttcc cggtgtgact gctactgctg
     5041 ctgctgataa tcttgattat acagctgtag ttaagggagc agcagtaagt gcagtaagta
     5101 aggcattaga tgtattaaca atagcaataa gaagtactat tgatgaagga cttaaaaaag
     5161 taaaagaagc aataaaaatt aatgctaatg ctactgctac tcctgtgatg tctgataagg
     5221 gcaattctgt ttctaaaaat tgatatgtta tactcttata taattaaata atcaataaga
     5281 aagacaaagt tacaaaggaa aggatactga gagttaatct ctttgtatct tttattttat
     5341 agtgtgttca aatgtgaatt tattgtgtta tgtggttaat tttattattt gtagtcttta
     5401 aatgttctag ttaaaaatat tcagtttatt atatcaaatt gtacaaacaa agataattga
     5461 gttaatgtca ggtgctttgg gctttaatat gaattactat ttagtaatgg tgattattaa
     5521 ttctaaggaa ggagaatatt tgtgagaaaa aatttattta tattattaat tttaggatta
     5581 gtatcgtgta atttggattc taaattattg gataataaag gaagacctga caatttttta
     5641 aaagatgttg taaataatgt tcaaggtgat gaaccaataa aagaagatgt tgttaataaa
     5701 gtttttgttg aaaaagtagt aagaggagat tctgtaatca aagatgagaa aggagaatta
     5761 atatctgccc ttataaatga tattaatagt gttatgggat tattaaatca agataaggct
     5821 gaagttgagg atgcaaatca atatggtatg
//
