BRE_102	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BRE_102	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BRE_131	PWY-7205	CMP phosphorylation
BRE_15	PWY-6012	acyl carrier protein metabolism I
BRE_15	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BRE_151	PWY-6906	chitin derivatives degradation
BRE_151	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
BRE_151	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
BRE_152	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BRE_152	PWY-6855	chitin degradation I (archaea)
BRE_152	PWY-6906	chitin derivatives degradation
BRE_153	PWY-6854	ethylene biosynthesis III (microbes)
BRE_158	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BRE_197	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BRE_197	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BRE_20	PWY-7193	pyrimidine ribonucleosides salvage I
BRE_222	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BRE_222	PWY-6855	chitin degradation I (archaea)
BRE_222	PWY-6906	chitin derivatives degradation
BRE_225	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
BRE_229	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BRE_247	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
BRE_249	PWY-6826	phosphatidylcholine biosynthesis VI
BRE_25	PWY-1042	glycolysis IV (plant cytosol)
BRE_25	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BRE_25	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_25	PWY-7385	1,3-propanediol biosynthesis (engineered)
BRE_26	PWY-6700	queuosine biosynthesis
BRE_295	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BRE_30	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
BRE_30	PWY-2201	folate transformations I
BRE_30	PWY-3841	folate transformations II
BRE_30	PWY-5030	L-histidine degradation III
BRE_30	PWY-5497	purine nucleobases degradation II (anaerobic)
BRE_30	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BRE_310	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BRE_310	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BRE_310	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BRE_311	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BRE_311	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BRE_318	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BRE_318	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BRE_318	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BRE_340	PWY-1042	glycolysis IV (plant cytosol)
BRE_340	PWY-1622	formaldehyde assimilation I (serine pathway)
BRE_340	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BRE_340	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_340	PWY-5723	Rubisco shunt
BRE_340	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BRE_340	PWY-6886	1-butanol autotrophic biosynthesis
BRE_340	PWY-6901	superpathway of glucose and xylose degradation
BRE_340	PWY-7003	glycerol degradation to butanol
BRE_340	PWY-7124	ethylene biosynthesis V (engineered)
BRE_340	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BRE_345	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BRE_351	PWY-1042	glycolysis IV (plant cytosol)
BRE_351	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BRE_351	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_351	PWY-5723	Rubisco shunt
BRE_351	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BRE_351	PWY-6886	1-butanol autotrophic biosynthesis
BRE_351	PWY-6901	superpathway of glucose and xylose degradation
BRE_351	PWY-7003	glycerol degradation to butanol
BRE_351	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BRE_351	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BRE_366	PWY-7310	D-glucosaminate degradation
BRE_367	PWY-5667	CDP-diacylglycerol biosynthesis I
BRE_367	PWY-5981	CDP-diacylglycerol biosynthesis III
BRE_371	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BRE_374	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BRE_374	PWY-6153	autoinducer AI-2 biosynthesis I
BRE_374	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
BRE_375	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BRE_375	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
BRE_376	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BRE_376	PWY-6153	autoinducer AI-2 biosynthesis I
BRE_376	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
BRE_405	PWY-3861	mannitol degradation II
BRE_405	PWY-3881	mannitol biosynthesis
BRE_405	PWY-5659	GDP-mannose biosynthesis
BRE_405	PWY-7456	mannan degradation
BRE_405	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
BRE_406	PWY-7310	D-glucosaminate degradation
BRE_41	PWY-5667	CDP-diacylglycerol biosynthesis I
BRE_41	PWY-5981	CDP-diacylglycerol biosynthesis III
BRE_41	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
BRE_41	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
BRE_415	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BRE_422	PWY-6599	guanine and guanosine salvage II
BRE_422	PWY-6609	adenine and adenosine salvage III
BRE_422	PWY-6610	adenine and adenosine salvage IV
BRE_422	PWY-6620	guanine and guanosine salvage
BRE_423	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BRE_424	PWY-6123	inosine-5'-phosphate biosynthesis I
BRE_424	PWY-6124	inosine-5'-phosphate biosynthesis II
BRE_424	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BRE_424	PWY-7234	inosine-5'-phosphate biosynthesis III
BRE_446	PWY-1042	glycolysis IV (plant cytosol)
BRE_446	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BRE_446	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_446	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BRE_446	PWY-7385	1,3-propanediol biosynthesis (engineered)
BRE_469	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BRE_469	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BRE_469	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BRE_469	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BRE_469	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BRE_469	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BRE_469	PWY-7205	CMP phosphorylation
BRE_469	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BRE_469	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BRE_469	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BRE_469	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BRE_469	PWY-7224	purine deoxyribonucleosides salvage
BRE_469	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BRE_469	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BRE_475	PWY-5663	tetrahydrobiopterin biosynthesis I
BRE_475	PWY-5664	tetrahydrobiopterin biosynthesis II
BRE_475	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BRE_475	PWY-6703	preQ<sub>0</sub> biosynthesis
BRE_475	PWY-6983	tetrahydrobiopterin biosynthesis III
BRE_475	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BRE_479	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BRE_479	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BRE_529	PWY-3961	phosphopantothenate biosynthesis II
BRE_58	PWY-1042	glycolysis IV (plant cytosol)
BRE_58	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_58	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BRE_58	PWY-7003	glycerol degradation to butanol
BRE_582	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BRE_582	PWY-7177	UTP and CTP dephosphorylation II
BRE_582	PWY-7185	UTP and CTP dephosphorylation I
BRE_59	PWY-1042	glycolysis IV (plant cytosol)
BRE_59	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_59	PWY-6886	1-butanol autotrophic biosynthesis
BRE_59	PWY-6901	superpathway of glucose and xylose degradation
BRE_59	PWY-7003	glycerol degradation to butanol
BRE_590	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BRE_590	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BRE_593	PWY-1281	sulfoacetaldehyde degradation I
BRE_593	PWY-5482	pyruvate fermentation to acetate II
BRE_593	PWY-5485	pyruvate fermentation to acetate IV
BRE_593	PWY-5497	purine nucleobases degradation II (anaerobic)
BRE_593	PWY-6637	sulfolactate degradation II
BRE_60	PWY-1042	glycolysis IV (plant cytosol)
BRE_60	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_60	PWY-6901	superpathway of glucose and xylose degradation
BRE_60	PWY-7003	glycerol degradation to butanol
BRE_602	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BRE_602	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BRE_605	PWY-1622	formaldehyde assimilation I (serine pathway)
BRE_605	PWY-181	photorespiration
BRE_605	PWY-2161	folate polyglutamylation
BRE_605	PWY-2201	folate transformations I
BRE_605	PWY-3661	glycine betaine degradation I
BRE_605	PWY-3661-1	glycine betaine degradation II (mammalian)
BRE_605	PWY-3841	folate transformations II
BRE_605	PWY-5497	purine nucleobases degradation II (anaerobic)
BRE_624	PWY-6556	pyrimidine ribonucleosides salvage II
BRE_624	PWY-7181	pyrimidine deoxyribonucleosides degradation
BRE_624	PWY-7193	pyrimidine ribonucleosides salvage I
BRE_624	PWY-7199	pyrimidine deoxyribonucleosides salvage
BRE_629	PWY-5482	pyruvate fermentation to acetate II
BRE_629	PWY-5485	pyruvate fermentation to acetate IV
BRE_629	PWY-5497	purine nucleobases degradation II (anaerobic)
BRE_636	PWY-7310	D-glucosaminate degradation
BRE_637	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
BRE_637	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
BRE_642	PWY-5381	pyridine nucleotide cycling (plants)
BRE_643	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BRE_651	PWY-7310	D-glucosaminate degradation
BRE_663	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BRE_663	PWY-5723	Rubisco shunt
BRE_664	PWY-1622	formaldehyde assimilation I (serine pathway)
BRE_664	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_665	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BRE_689	PWY-6174	mevalonate pathway II (archaea)
BRE_689	PWY-7391	isoprene biosynthesis II (engineered)
BRE_689	PWY-7524	mevalonate pathway III (archaea)
BRE_689	PWY-922	mevalonate pathway I
BRE_690	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
BRE_690	PWY-6174	mevalonate pathway II (archaea)
BRE_690	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
BRE_690	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
BRE_690	PWY-7102	bisabolene biosynthesis
BRE_690	PWY-7391	isoprene biosynthesis II (engineered)
BRE_690	PWY-7524	mevalonate pathway III (archaea)
BRE_690	PWY-7560	methylerythritol phosphate pathway II
BRE_690	PWY-922	mevalonate pathway I
BRE_691	PWY-6174	mevalonate pathway II (archaea)
BRE_691	PWY-7391	isoprene biosynthesis II (engineered)
BRE_691	PWY-7524	mevalonate pathway III (archaea)
BRE_691	PWY-922	mevalonate pathway I
BRE_692	PWY-7391	isoprene biosynthesis II (engineered)
BRE_692	PWY-922	mevalonate pathway I
BRE_694	PWY-3821	galactose degradation III
BRE_694	PWY-6174	mevalonate pathway II (archaea)
BRE_694	PWY-6317	galactose degradation I (Leloir pathway)
BRE_694	PWY-6527	stachyose degradation
BRE_694	PWY-7391	isoprene biosynthesis II (engineered)
BRE_694	PWY-922	mevalonate pathway I
BRE_704	PWY-6829	tRNA methylation (yeast)
BRE_704	PWY-7285	methylwyosine biosynthesis
BRE_704	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
BRE_727	PWY-5269	cardiolipin biosynthesis II
BRE_727	PWY-5668	cardiolipin biosynthesis I
BRE_733	PWY-1042	glycolysis IV (plant cytosol)
BRE_733	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BRE_733	PWY-5484	glycolysis II (from fructose 6-phosphate)
BRE_733	PWY-7385	1,3-propanediol biosynthesis (engineered)
BRE_736	PWY-3801	sucrose degradation II (sucrose synthase)
BRE_736	PWY-5054	sorbitol biosynthesis I
BRE_736	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
BRE_736	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BRE_736	PWY-5659	GDP-mannose biosynthesis
BRE_736	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BRE_736	PWY-621	sucrose degradation III (sucrose invertase)
BRE_736	PWY-622	starch biosynthesis
BRE_736	PWY-6531	mannitol cycle
BRE_736	PWY-6981	chitin biosynthesis
BRE_736	PWY-7238	sucrose biosynthesis II
BRE_736	PWY-7347	sucrose biosynthesis III
BRE_736	PWY-7385	1,3-propanediol biosynthesis (engineered)
BRE_774	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BRE_774	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BRE_774	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BRE_774	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BRE_775	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BRE_775	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BRE_785	PWY-6605	adenine and adenosine salvage II
BRE_785	PWY-6610	adenine and adenosine salvage IV
BRE_790	PWY-5381	pyridine nucleotide cycling (plants)
BRE_790	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BRE_801	PWY-7199	pyrimidine deoxyribonucleosides salvage
BRE_803	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BRE_803	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BRE_803	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BRE_803	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BRE_803	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BRE_803	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BRE_820	PWY-6700	queuosine biosynthesis
BRE_827	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BRE_827	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BRE_829	PWY-7205	CMP phosphorylation
BRE_831	PWY-2781	<i>cis</i>-zeatin biosynthesis
BRE_836	PWY-7310	D-glucosaminate degradation
BRE_846	PWY-6749	CMP-legionaminate biosynthesis I
BRE_852	PWY-4981	L-proline biosynthesis II (from arginine)
BRE_853	PWY-4981	L-proline biosynthesis II (from arginine)
BRE_853	PWY-4984	urea cycle
BRE_853	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BRE_86	PWY-6823	molybdenum cofactor biosynthesis
BRE_86	PWY-6891	thiazole biosynthesis II (Bacillus)
BRE_86	PWY-6892	thiazole biosynthesis I (E. coli)
BRE_86	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BRE_89	PWY-5481	pyruvate fermentation to lactate
BRE_89	PWY-6901	superpathway of glucose and xylose degradation
BRE_9	PWY-6749	CMP-legionaminate biosynthesis I
BRE_95	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BRE_96	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
