BMEII0009 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) BMEII0009 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation BMEII0009 PWY-7242 D-fructuronate degradation BMEII0009 PWY-7310 D-glucosaminate degradation BMEII0013 PWY-5958 acridone alkaloid biosynthesis BMEII0013 PWY-6543 4-aminobenzoate biosynthesis BMEII0013 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis BMEII0013 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis BMEII0013 PWY-6722 candicidin biosynthesis BMEII0023 PWY-3801 sucrose degradation II (sucrose synthase) BMEII0023 PWY-6527 stachyose degradation BMEII0023 PWY-6981 chitin biosynthesis BMEII0023 PWY-7238 sucrose biosynthesis II BMEII0023 PWY-7343 UDP-glucose biosynthesis BMEII0059 PWY-6163 chorismate biosynthesis from 3-dehydroquinate BMEII0077 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) BMEII0077 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I BMEII0077 PWY-5901 2,3-dihydroxybenzoate biosynthesis BMEII0077 PWY-6406 salicylate biosynthesis I BMEII0079 PWY-5901 2,3-dihydroxybenzoate biosynthesis BMEII0080 PWY-5901 2,3-dihydroxybenzoate biosynthesis BMEII0081 PWY-6012 acyl carrier protein metabolism I BMEII0081 PWY-6012-1 acyl carrier protein metabolism II (mammalian) BMEII0136 PWY-5386 methylglyoxal degradation I BMEII0185 PWY-6454 vancomycin resistance I BMEII0185 PWY-6901 superpathway of glucose and xylose degradation BMEII0197 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation BMEII0215 PWY-1361 benzoyl-CoA degradation I (aerobic) BMEII0215 PWY-5109 2-methylbutanoate biosynthesis BMEII0215 PWY-5136 fatty acid β-oxidation II (peroxisome) BMEII0215 PWY-5138 unsaturated, even numbered fatty acid β-oxidation BMEII0215 PWY-5177 glutaryl-CoA degradation BMEII0215 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle BMEII0215 PWY-6435 4-hydroxybenzoate biosynthesis V BMEII0215 PWY-6583 pyruvate fermentation to butanol I BMEII0215 PWY-6863 pyruvate fermentation to hexanol BMEII0215 PWY-6883 pyruvate fermentation to butanol II BMEII0215 PWY-6944 androstenedione degradation BMEII0215 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) BMEII0215 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) BMEII0215 PWY-7007 methyl ketone biosynthesis BMEII0215 PWY-7046 4-coumarate degradation (anaerobic) BMEII0215 PWY-7094 fatty acid salvage BMEII0215 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis BMEII0215 PWY-735 jasmonic acid biosynthesis BMEII0215 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) BMEII0232 PWY-7183 pyrimidine nucleobases salvage I BMEII0233 PWY-5839 menaquinol-7 biosynthesis BMEII0233 PWY-5844 menaquinol-9 biosynthesis BMEII0233 PWY-5849 menaquinol-6 biosynthesis BMEII0233 PWY-5890 menaquinol-10 biosynthesis BMEII0233 PWY-5891 menaquinol-11 biosynthesis BMEII0233 PWY-5892 menaquinol-12 biosynthesis BMEII0233 PWY-5895 menaquinol-13 biosynthesis BMEII0246 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II BMEII0246 PWY-5523 5,6-dimethylbenzimidazole biosynthesis BMEII0248 PWY-1622 formaldehyde assimilation I (serine pathway) BMEII0248 PWY-5484 glycolysis II (from fructose 6-phosphate) BMEII0249 PWY-2941 L-lysine biosynthesis II BMEII0249 PWY-2942 L-lysine biosynthesis III BMEII0249 PWY-5097 L-lysine biosynthesis VI BMEII0251 PWY-2723 trehalose degradation V BMEII0251 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II BMEII0251 PWY-5661 GDP-glucose biosynthesis BMEII0251 PWY-7238 sucrose biosynthesis II BMEII0251 PWY-7385 1,3-propanediol biosynthesis (engineered) BMEII0273 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) BMEII0273 PWY-7400 L-arginine biosynthesis IV (archaebacteria) BMEII0289 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation BMEII0309 PWY-6167 flavin biosynthesis II (archaea) BMEII0322 PWY-3781 aerobic respiration I (cytochrome c) BMEII0322 PWY-4521 arsenite oxidation I (respiratory) BMEII0322 PWY-6692 Fe(II) oxidation BMEII0322 PWY-7279 aerobic respiration II (cytochrome c) (yeast) BMEII0339 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) BMEII0339 PWY-7494 choline degradation IV BMEII0356 PWY-5101 L-isoleucine biosynthesis II BMEII0356 PWY-5103 L-isoleucine biosynthesis III BMEII0356 PWY-5104 L-isoleucine biosynthesis IV BMEII0356 PWY-7111 pyruvate fermentation to isobutanol (engineered) BMEII0357 PWY-7130 L-glucose degradation BMEII0358 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) BMEII0358 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation BMEII0358 PWY-7242 D-fructuronate degradation BMEII0358 PWY-7310 D-glucosaminate degradation BMEII0365 PWY-5028 L-histidine degradation II BMEII0365 PWY-5030 L-histidine degradation III BMEII0368 PWY-5028 L-histidine degradation II BMEII0368 PWY-5030 L-histidine degradation III BMEII0374 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) BMEII0385 PWY-6906 chitin derivatives degradation BMEII0385 PWY-7077 N-acetyl-D-galactosamine degradation BMEII0385 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation BMEII0387 PWY-2201 folate transformations I BMEII0387 PWY-5497 purine nucleobases degradation II (anaerobic) BMEII0396 PWY-31 canavanine degradation BMEII0396 PWY-4984 urea cycle BMEII0396 PWY-6305 putrescine biosynthesis IV BMEII0396 PWY-6922 L-Nδ-acetylornithine biosynthesis BMEII0404 PWY-7396 butanol and isobutanol biosynthesis (engineered) BMEII0407 PWY-2941 L-lysine biosynthesis II BMEII0407 PWY-2942 L-lysine biosynthesis III BMEII0407 PWY-5097 L-lysine biosynthesis VI BMEII0407 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) BMEII0407 PWY-6559 spermidine biosynthesis II BMEII0407 PWY-6562 norspermidine biosynthesis BMEII0407 PWY-7153 grixazone biosynthesis BMEII0407 PWY-7400 L-arginine biosynthesis IV (archaebacteria) BMEII0422 PWY-5484 glycolysis II (from fructose 6-phosphate) BMEII0423 PWY-1042 glycolysis IV (plant cytosol) BMEII0423 PWY-1861 formaldehyde assimilation II (RuMP Cycle) BMEII0423 PWY-5484 glycolysis II (from fructose 6-phosphate) BMEII0423 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) BMEII0423 PWY-7385 1,3-propanediol biosynthesis (engineered) BMEII0425 PWY-1042 glycolysis IV (plant cytosol) BMEII0425 PWY-5484 glycolysis II (from fructose 6-phosphate) BMEII0425 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) BMEII0425 PWY-7003 glycerol degradation to butanol BMEII0429 PWY-4261 glycerol degradation I BMEII0429 PWY-6118 glycerol-3-phosphate shuttle BMEII0429 PWY-6952 glycerophosphodiester degradation BMEII0430 PWY-4261 glycerol degradation I BMEII0438 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) BMEII0438 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) BMEII0460 PWY-723 alkylnitronates degradation BMEII0474 PWY-7242 D-fructuronate degradation BMEII0476 PWY-7247 β-D-glucuronide and D-glucuronate degradation BMEII0476 PWY-7248 pectin degradation III BMEII0477 PWY-7247 β-D-glucuronide and D-glucuronate degradation BMEII0477 PWY-7248 pectin degradation III BMEII0497 PWY-1361 benzoyl-CoA degradation I (aerobic) BMEII0497 PWY-5109 2-methylbutanoate biosynthesis BMEII0497 PWY-5136 fatty acid β-oxidation II (peroxisome) BMEII0497 PWY-5138 unsaturated, even numbered fatty acid β-oxidation BMEII0497 PWY-5177 glutaryl-CoA degradation BMEII0497 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle BMEII0497 PWY-6435 4-hydroxybenzoate biosynthesis V BMEII0497 PWY-6583 pyruvate fermentation to butanol I BMEII0497 PWY-6863 pyruvate fermentation to hexanol BMEII0497 PWY-6883 pyruvate fermentation to butanol II BMEII0497 PWY-6944 androstenedione degradation BMEII0497 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) BMEII0497 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) BMEII0497 PWY-7007 methyl ketone biosynthesis BMEII0497 PWY-7046 4-coumarate degradation (anaerobic) BMEII0497 PWY-7094 fatty acid salvage BMEII0497 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis BMEII0497 PWY-735 jasmonic acid biosynthesis BMEII0497 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) BMEII0500 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) BMEII0502 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type BMEII0502 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) BMEII0502 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type BMEII0502 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type BMEII0509 PWY-3341 L-proline biosynthesis III BMEII0509 PWY-4981 L-proline biosynthesis II (from arginine) BMEII0509 PWY-6344 L-ornithine degradation II (Stickland reaction) BMEII0510 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate BMEII0510 PWY-2201 folate transformations I BMEII0510 PWY-3841 folate transformations II BMEII0510 PWY-5030 L-histidine degradation III BMEII0510 PWY-5497 purine nucleobases degradation II (anaerobic) BMEII0510 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate BMEII0511 PWY-5101 L-isoleucine biosynthesis II BMEII0511 PWY-5103 L-isoleucine biosynthesis III BMEII0511 PWY-5104 L-isoleucine biosynthesis IV BMEII0511 PWY-7111 pyruvate fermentation to isobutanol (engineered) BMEII0512 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II BMEII0512 PWY-6855 chitin degradation I (archaea) BMEII0512 PWY-6906 chitin derivatives degradation BMEII0513 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) BMEII0523 PWY-381 nitrate reduction II (assimilatory) BMEII0523 PWY-5675 nitrate reduction V (assimilatory) BMEII0523 PWY-6549 L-glutamine biosynthesis III BMEII0523 PWY-6963 ammonia assimilation cycle I BMEII0523 PWY-6964 ammonia assimilation cycle II BMEII0528 PWY-6840 homoglutathione biosynthesis BMEII0528 PWY-7255 ergothioneine biosynthesis I (bacteria) BMEII0546 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) BMEII0554 PWY-381 nitrate reduction II (assimilatory) BMEII0554 PWY-5675 nitrate reduction V (assimilatory) BMEII0554 PWY-6549 L-glutamine biosynthesis III BMEII0554 PWY-6963 ammonia assimilation cycle I BMEII0554 PWY-6964 ammonia assimilation cycle II BMEII0564 PWY-5737 (5R)-carbapenem carboxylate biosynthesis BMEII0564 PWY-6853 ethylene biosynthesis II (microbes) BMEII0564 PWY-6922 L-Nδ-acetylornithine biosynthesis BMEII0569 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation BMEII0581 PWY-6854 ethylene biosynthesis III (microbes) BMEII0589 PWY-6167 flavin biosynthesis II (archaea) BMEII0589 PWY-6168 flavin biosynthesis III (fungi) BMEII0626 PWY-7533 gliotoxin biosynthesis BMEII0627 PWY-6610 adenine and adenosine salvage IV BMEII0638 PWY-6185 4-methylcatechol degradation (ortho cleavage) BMEII0640 PWY-6215 4-chlorobenzoate degradation BMEII0669 PWY-5686 UMP biosynthesis BMEII0670 PWY-5686 UMP biosynthesis BMEII0675 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation BMEII0678 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) BMEII0678 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) BMEII0684 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II BMEII0685 PWY-6749 CMP-legionaminate biosynthesis I BMEII0695 PWY-6826 phosphatidylcholine biosynthesis VI BMEII0724 PWY-7456 mannan degradation BMEII0727 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) BMEII0728 PWY-5129 sphingolipid biosynthesis (plants) BMEII0730 PWY-3821 galactose degradation III BMEII0730 PWY-6317 galactose degradation I (Leloir pathway) BMEII0730 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis BMEII0730 PWY-6527 stachyose degradation BMEII0730 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis BMEII0730 PWY-7344 UDP-D-galactose biosynthesis BMEII0741 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) BMEII0748 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA BMEII0758 PWY-7545 pyruvate to cytochrome bd terminal oxidase electron transfer BMEII0775 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II BMEII0777 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II BMEII0779 PWY-4381 fatty acid biosynthesis initiation I BMEII0824 PWY-4261 glycerol degradation I BMEII0839 PWY-5265 peptidoglycan biosynthesis II (staphylococci) BMEII0839 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) BMEII0839 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) BMEII0848 PWY-5738 GDP-6-deoxy-D-talose biosynthesis BMEII0848 PWY-5739 GDP-D-perosamine biosynthesis BMEII0848 PWY-5740 GDP-L-colitose biosynthesis BMEII0848 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) BMEII0862 PWY-2941 L-lysine biosynthesis II BMEII0862 PWY-2942 L-lysine biosynthesis III BMEII0862 PWY-5097 L-lysine biosynthesis VI BMEII0870 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) BMEII0870 PWY-7494 choline degradation IV BMEII0871 PWY-6163 chorismate biosynthesis from 3-dehydroquinate BMEII0880 PWY-5482 pyruvate fermentation to acetate II BMEII0880 PWY-5485 pyruvate fermentation to acetate IV BMEII0880 PWY-5497 purine nucleobases degradation II (anaerobic) BMEII0887 PWY-7221 guanosine ribonucleotides de novo biosynthesis BMEII0893 PWY-5506 methanol oxidation to formaldehyde IV BMEII0896 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation BMEII0896 PWY-6596 adenosine nucleotides degradation I BMEII0896 PWY-7221 guanosine ribonucleotides de novo biosynthesis BMEII0898 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) BMEII0899 PWY-6749 CMP-legionaminate biosynthesis I BMEII0900 PWY-5659 GDP-mannose biosynthesis BMEII0900 PWY-6073 alginate biosynthesis I (algal) BMEII0900 PWY-6082 alginate biosynthesis II (bacterial) BMEII0900 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) BMEII0910 PWY-4321 L-glutamate degradation IV BMEII0929 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III BMEII0929 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I BMEII0929 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV BMEII0929 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP BMEII0929 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II BMEII0929 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II BMEII0929 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I BMEII0929 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis BMEII0930 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III BMEII0930 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I BMEII0930 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV BMEII0930 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP BMEII0930 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II BMEII0930 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II BMEII0930 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I BMEII0930 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis BMEII0973 PWY-6748 nitrate reduction VII (denitrification) BMEII0973 PWY-7084 nitrifier denitrification BMEII0979 PWY-4261 glycerol degradation I BMEII0988 PWY-6523 nitrite-dependent anaerobic methane oxidation BMEII0988 PWY-6748 nitrate reduction VII (denitrification) BMEII0988 PWY-7084 nitrifier denitrification BMEII0998 PWY-3781 aerobic respiration I (cytochrome c) BMEII0998 PWY-4521 arsenite oxidation I (respiratory) BMEII0998 PWY-6692 Fe(II) oxidation BMEII0998 PWY-7279 aerobic respiration II (cytochrome c) (yeast) BMEII1020 PWY-1361 benzoyl-CoA degradation I (aerobic) BMEII1020 PWY-5109 2-methylbutanoate biosynthesis BMEII1020 PWY-5136 fatty acid β-oxidation II (peroxisome) BMEII1020 PWY-5138 unsaturated, even numbered fatty acid β-oxidation BMEII1020 PWY-5177 glutaryl-CoA degradation BMEII1020 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle BMEII1020 PWY-6435 4-hydroxybenzoate biosynthesis V BMEII1020 PWY-6583 pyruvate fermentation to butanol I BMEII1020 PWY-6863 pyruvate fermentation to hexanol BMEII1020 PWY-6883 pyruvate fermentation to butanol II BMEII1020 PWY-6944 androstenedione degradation BMEII1020 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) BMEII1020 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) BMEII1020 PWY-7007 methyl ketone biosynthesis BMEII1020 PWY-7046 4-coumarate degradation (anaerobic) BMEII1020 PWY-7094 fatty acid salvage BMEII1020 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis BMEII1020 PWY-735 jasmonic acid biosynthesis BMEII1020 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) BMEII1044 PWY-5523 5,6-dimethylbenzimidazole biosynthesis BMEII1044 PWY-6167 flavin biosynthesis II (archaea) BMEII1044 PWY-6168 flavin biosynthesis III (fungi) BMEII1051 PWY-5392 reductive TCA cycle II BMEII1051 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation BMEII1051 PWY-5690 TCA cycle II (plants and fungi) BMEII1051 PWY-5913 TCA cycle VI (obligate autotrophs) BMEII1051 PWY-6728 methylaspartate cycle BMEII1051 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) BMEII1051 PWY-7254 TCA cycle VII (acetate-producers) BMEII1051 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) BMEII1062 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) BMEII1062 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) BMEII1064 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) BMEII1064 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) BMEII1105 PWY-7219 adenosine ribonucleotides de novo biosynthesis BMEII1134 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation