BMI_II1019 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) BMI_II1019 PWY-7400 L-arginine biosynthesis IV (archaebacteria) BMI_II1043 PWY-2723 trehalose degradation V BMI_II1043 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II BMI_II1043 PWY-5661 GDP-glucose biosynthesis BMI_II1043 PWY-7238 sucrose biosynthesis II BMI_II1043 PWY-7385 1,3-propanediol biosynthesis (engineered) BMI_II1045 PWY-2941 L-lysine biosynthesis II BMI_II1045 PWY-2942 L-lysine biosynthesis III BMI_II1045 PWY-5097 L-lysine biosynthesis VI BMI_II1046 PWY-1622 formaldehyde assimilation I (serine pathway) BMI_II1046 PWY-5484 glycolysis II (from fructose 6-phosphate) BMI_II1055 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II BMI_II1055 PWY-5523 5,6-dimethylbenzimidazole biosynthesis BMI_II1066 PWY-5839 menaquinol-7 biosynthesis BMI_II1066 PWY-5844 menaquinol-9 biosynthesis BMI_II1066 PWY-5849 menaquinol-6 biosynthesis BMI_II1066 PWY-5890 menaquinol-10 biosynthesis BMI_II1066 PWY-5891 menaquinol-11 biosynthesis BMI_II1066 PWY-5892 menaquinol-12 biosynthesis BMI_II1066 PWY-5895 menaquinol-13 biosynthesis BMI_II1067 PWY-7183 pyrimidine nucleobases salvage I BMI_II1087 PWY-1361 benzoyl-CoA degradation I (aerobic) BMI_II1087 PWY-5109 2-methylbutanoate biosynthesis BMI_II1087 PWY-5136 fatty acid β-oxidation II (peroxisome) BMI_II1087 PWY-5138 unsaturated, even numbered fatty acid β-oxidation BMI_II1087 PWY-5177 glutaryl-CoA degradation BMI_II1087 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle BMI_II1087 PWY-6435 4-hydroxybenzoate biosynthesis V BMI_II1087 PWY-6583 pyruvate fermentation to butanol I BMI_II1087 PWY-6863 pyruvate fermentation to hexanol BMI_II1087 PWY-6883 pyruvate fermentation to butanol II BMI_II1087 PWY-6944 androstenedione degradation BMI_II1087 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) BMI_II1087 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) BMI_II1087 PWY-7007 methyl ketone biosynthesis BMI_II1087 PWY-7046 4-coumarate degradation (anaerobic) BMI_II1087 PWY-7094 fatty acid salvage BMI_II1087 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis BMI_II1087 PWY-735 jasmonic acid biosynthesis BMI_II1087 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) BMI_II1104 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation BMI_II1115 PWY-6454 vancomycin resistance I BMI_II1115 PWY-6901 superpathway of glucose and xylose degradation BMI_II1166 PWY-5386 methylglyoxal degradation I BMI_II12 PWY-6012 acyl carrier protein metabolism I BMI_II12 PWY-6012-1 acyl carrier protein metabolism II (mammalian) BMI_II129 PWY-7219 adenosine ribonucleotides de novo biosynthesis BMI_II13 PWY-5901 2,3-dihydroxybenzoate biosynthesis BMI_II14 PWY-5901 2,3-dihydroxybenzoate biosynthesis BMI_II16 PWY-5791 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) BMI_II16 PWY-5837 1,4-dihydroxy-2-naphthoate biosynthesis I BMI_II16 PWY-5901 2,3-dihydroxybenzoate biosynthesis BMI_II16 PWY-6406 salicylate biosynthesis I BMI_II177 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) BMI_II177 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) BMI_II178 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) BMI_II178 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) BMI_II189 PWY-5392 reductive TCA cycle II BMI_II189 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation BMI_II189 PWY-5690 TCA cycle II (plants and fungi) BMI_II189 PWY-5913 TCA cycle VI (obligate autotrophs) BMI_II189 PWY-6728 methylaspartate cycle BMI_II189 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) BMI_II189 PWY-7254 TCA cycle VII (acetate-producers) BMI_II189 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) BMI_II197 PWY-5523 5,6-dimethylbenzimidazole biosynthesis BMI_II197 PWY-6167 flavin biosynthesis II (archaea) BMI_II197 PWY-6168 flavin biosynthesis III (fungi) BMI_II220 PWY-1361 benzoyl-CoA degradation I (aerobic) BMI_II220 PWY-5109 2-methylbutanoate biosynthesis BMI_II220 PWY-5136 fatty acid β-oxidation II (peroxisome) BMI_II220 PWY-5138 unsaturated, even numbered fatty acid β-oxidation BMI_II220 PWY-5177 glutaryl-CoA degradation BMI_II220 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle BMI_II220 PWY-6435 4-hydroxybenzoate biosynthesis V BMI_II220 PWY-6583 pyruvate fermentation to butanol I BMI_II220 PWY-6863 pyruvate fermentation to hexanol BMI_II220 PWY-6883 pyruvate fermentation to butanol II BMI_II220 PWY-6944 androstenedione degradation BMI_II220 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) BMI_II220 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) BMI_II220 PWY-7007 methyl ketone biosynthesis BMI_II220 PWY-7046 4-coumarate degradation (anaerobic) BMI_II220 PWY-7094 fatty acid salvage BMI_II220 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis BMI_II220 PWY-735 jasmonic acid biosynthesis BMI_II220 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) BMI_II243 PWY-3781 aerobic respiration I (cytochrome c) BMI_II243 PWY-4521 arsenite oxidation I (respiratory) BMI_II243 PWY-6692 Fe(II) oxidation BMI_II243 PWY-7279 aerobic respiration II (cytochrome c) (yeast) BMI_II254 PWY-6523 nitrite-dependent anaerobic methane oxidation BMI_II254 PWY-6748 nitrate reduction VII (denitrification) BMI_II254 PWY-7084 nitrifier denitrification BMI_II263 PWY-4261 glycerol degradation I BMI_II270 PWY-6748 nitrate reduction VII (denitrification) BMI_II270 PWY-7084 nitrifier denitrification BMI_II310 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III BMI_II310 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I BMI_II310 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV BMI_II310 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP BMI_II310 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II BMI_II310 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II BMI_II310 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I BMI_II310 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis BMI_II311 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III BMI_II311 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I BMI_II311 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV BMI_II311 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP BMI_II311 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II BMI_II311 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II BMI_II311 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I BMI_II311 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis BMI_II334 PWY-4321 L-glutamate degradation IV BMI_II34 PWY-6163 chorismate biosynthesis from 3-dehydroquinate BMI_II343 PWY-5659 GDP-mannose biosynthesis BMI_II343 PWY-6073 alginate biosynthesis I (algal) BMI_II343 PWY-6082 alginate biosynthesis II (bacterial) BMI_II343 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) BMI_II344 PWY-6749 CMP-legionaminate biosynthesis I BMI_II345 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) BMI_II347 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation BMI_II347 PWY-6596 adenosine nucleotides degradation I BMI_II347 PWY-7221 guanosine ribonucleotides de novo biosynthesis BMI_II350 PWY-5506 methanol oxidation to formaldehyde IV BMI_II356 PWY-7221 guanosine ribonucleotides de novo biosynthesis BMI_II383 PWY-5482 pyruvate fermentation to acetate II BMI_II383 PWY-5485 pyruvate fermentation to acetate IV BMI_II383 PWY-5497 purine nucleobases degradation II (anaerobic) BMI_II394 PWY-6163 chorismate biosynthesis from 3-dehydroquinate BMI_II395 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) BMI_II395 PWY-7494 choline degradation IV BMI_II403 PWY-2941 L-lysine biosynthesis II BMI_II403 PWY-2942 L-lysine biosynthesis III BMI_II403 PWY-5097 L-lysine biosynthesis VI BMI_II415 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) BMI_II416 PWY-5738 GDP-6-deoxy-D-talose biosynthesis BMI_II416 PWY-5739 GDP-D-perosamine biosynthesis BMI_II416 PWY-5740 GDP-L-colitose biosynthesis BMI_II416 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) BMI_II425 PWY-5265 peptidoglycan biosynthesis II (staphylococci) BMI_II425 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) BMI_II425 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) BMI_II440 PWY-4261 glycerol degradation I BMI_II484 PWY-4381 fatty acid biosynthesis initiation I BMI_II486 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II BMI_II488 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II BMI_II507 PWY-7545 pyruvate to cytochrome bd terminal oxidase electron transfer BMI_II518 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA BMI_II521 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA BMI_II521 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA BMI_II525 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) BMI_II537 PWY-3821 galactose degradation III BMI_II537 PWY-6317 galactose degradation I (Leloir pathway) BMI_II537 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis BMI_II537 PWY-6527 stachyose degradation BMI_II537 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis BMI_II537 PWY-7344 UDP-D-galactose biosynthesis BMI_II538 PWY-5129 sphingolipid biosynthesis (plants) BMI_II539 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) BMI_II541 PWY-7456 mannan degradation BMI_II566 PWY-6826 phosphatidylcholine biosynthesis VI BMI_II576 PWY-6749 CMP-legionaminate biosynthesis I BMI_II577 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II BMI_II585 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) BMI_II585 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) BMI_II590 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation BMI_II595 PWY-5686 UMP biosynthesis BMI_II596 PWY-5686 UMP biosynthesis BMI_II633 PWY-1361 benzoyl-CoA degradation I (aerobic) BMI_II633 PWY-2361 3-oxoadipate degradation BMI_II633 PWY-6185 4-methylcatechol degradation (ortho cleavage) BMI_II638 PWY-6215 4-chlorobenzoate degradation BMI_II650 PWY-6610 adenine and adenosine salvage IV BMI_II651 PWY-7533 gliotoxin biosynthesis BMI_II689 PWY-6167 flavin biosynthesis II (archaea) BMI_II689 PWY-6168 flavin biosynthesis III (fungi) BMI_II697 PWY-6854 ethylene biosynthesis III (microbes) BMI_II710 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation BMI_II715 PWY-5737 (5R)-carbapenem carboxylate biosynthesis BMI_II715 PWY-6853 ethylene biosynthesis II (microbes) BMI_II715 PWY-6922 L-Nδ-acetylornithine biosynthesis BMI_II725 PWY-381 nitrate reduction II (assimilatory) BMI_II725 PWY-5675 nitrate reduction V (assimilatory) BMI_II725 PWY-6549 L-glutamine biosynthesis III BMI_II725 PWY-6963 ammonia assimilation cycle I BMI_II725 PWY-6964 ammonia assimilation cycle II BMI_II73 PWY-3801 sucrose degradation II (sucrose synthase) BMI_II73 PWY-6527 stachyose degradation BMI_II73 PWY-6981 chitin biosynthesis BMI_II73 PWY-7238 sucrose biosynthesis II BMI_II73 PWY-7343 UDP-glucose biosynthesis BMI_II736 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) BMI_II756 PWY-6840 homoglutathione biosynthesis BMI_II756 PWY-7255 ergothioneine biosynthesis I (bacteria) BMI_II761 PWY-381 nitrate reduction II (assimilatory) BMI_II761 PWY-5675 nitrate reduction V (assimilatory) BMI_II761 PWY-6549 L-glutamine biosynthesis III BMI_II761 PWY-6963 ammonia assimilation cycle I BMI_II761 PWY-6964 ammonia assimilation cycle II BMI_II771 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) BMI_II772 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II BMI_II772 PWY-6855 chitin degradation I (archaea) BMI_II772 PWY-6906 chitin derivatives degradation BMI_II773 PWY-5101 L-isoleucine biosynthesis II BMI_II773 PWY-5103 L-isoleucine biosynthesis III BMI_II773 PWY-5104 L-isoleucine biosynthesis IV BMI_II773 PWY-7111 pyruvate fermentation to isobutanol (engineered) BMI_II774 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate BMI_II774 PWY-2201 folate transformations I BMI_II774 PWY-3841 folate transformations II BMI_II774 PWY-5030 L-histidine degradation III BMI_II774 PWY-5497 purine nucleobases degradation II (anaerobic) BMI_II774 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate BMI_II775 PWY-3341 L-proline biosynthesis III BMI_II775 PWY-4981 L-proline biosynthesis II (from arginine) BMI_II775 PWY-6344 L-ornithine degradation II (Stickland reaction) BMI_II782 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type BMI_II782 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) BMI_II782 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type BMI_II782 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type BMI_II784 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) BMI_II787 PWY-1361 benzoyl-CoA degradation I (aerobic) BMI_II787 PWY-5109 2-methylbutanoate biosynthesis BMI_II787 PWY-5136 fatty acid β-oxidation II (peroxisome) BMI_II787 PWY-5138 unsaturated, even numbered fatty acid β-oxidation BMI_II787 PWY-5177 glutaryl-CoA degradation BMI_II787 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle BMI_II787 PWY-6435 4-hydroxybenzoate biosynthesis V BMI_II787 PWY-6583 pyruvate fermentation to butanol I BMI_II787 PWY-6863 pyruvate fermentation to hexanol BMI_II787 PWY-6883 pyruvate fermentation to butanol II BMI_II787 PWY-6944 androstenedione degradation BMI_II787 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) BMI_II787 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) BMI_II787 PWY-7007 methyl ketone biosynthesis BMI_II787 PWY-7046 4-coumarate degradation (anaerobic) BMI_II787 PWY-7094 fatty acid salvage BMI_II787 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis BMI_II787 PWY-735 jasmonic acid biosynthesis BMI_II787 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) BMI_II806 PWY-7247 β-D-glucuronide and D-glucuronate degradation BMI_II806 PWY-7248 pectin degradation III BMI_II808 PWY-7242 D-fructuronate degradation BMI_II82 PWY-5958 acridone alkaloid biosynthesis BMI_II82 PWY-6543 4-aminobenzoate biosynthesis BMI_II82 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis BMI_II82 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis BMI_II82 PWY-6722 candicidin biosynthesis BMI_II823 PWY-723 alkylnitronates degradation BMI_II848 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) BMI_II848 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) BMI_II858 PWY-4261 glycerol degradation I BMI_II859 PWY-4261 glycerol degradation I BMI_II859 PWY-6118 glycerol-3-phosphate shuttle BMI_II859 PWY-6952 glycerophosphodiester degradation BMI_II86 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) BMI_II86 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation BMI_II86 PWY-7242 D-fructuronate degradation BMI_II86 PWY-7310 D-glucosaminate degradation BMI_II863 PWY-1042 glycolysis IV (plant cytosol) BMI_II863 PWY-5484 glycolysis II (from fructose 6-phosphate) BMI_II863 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) BMI_II863 PWY-7003 glycerol degradation to butanol BMI_II865 PWY-1042 glycolysis IV (plant cytosol) BMI_II865 PWY-1861 formaldehyde assimilation II (RuMP Cycle) BMI_II865 PWY-5484 glycolysis II (from fructose 6-phosphate) BMI_II865 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) BMI_II865 PWY-7385 1,3-propanediol biosynthesis (engineered) BMI_II866 PWY-5484 glycolysis II (from fructose 6-phosphate) BMI_II881 PWY-2941 L-lysine biosynthesis II BMI_II881 PWY-2942 L-lysine biosynthesis III BMI_II881 PWY-5097 L-lysine biosynthesis VI BMI_II881 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) BMI_II881 PWY-6559 spermidine biosynthesis II BMI_II881 PWY-6562 norspermidine biosynthesis BMI_II881 PWY-7153 grixazone biosynthesis BMI_II881 PWY-7400 L-arginine biosynthesis IV (archaebacteria) BMI_II884 PWY-7396 butanol and isobutanol biosynthesis (engineered) BMI_II894 PWY-31 canavanine degradation BMI_II894 PWY-4984 urea cycle BMI_II894 PWY-6305 putrescine biosynthesis IV BMI_II894 PWY-6922 L-Nδ-acetylornithine biosynthesis BMI_II903 PWY-2201 folate transformations I BMI_II903 PWY-5497 purine nucleobases degradation II (anaerobic) BMI_II905 PWY-6906 chitin derivatives degradation BMI_II905 PWY-7077 N-acetyl-D-galactosamine degradation BMI_II905 PWY-7395 D-galactosamine and N-acetyl-D-galactosamine degradation BMI_II917 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) BMI_II923 PWY-5028 L-histidine degradation II BMI_II923 PWY-5030 L-histidine degradation III BMI_II924 PWY-5028 L-histidine degradation II BMI_II924 PWY-5030 L-histidine degradation III BMI_II926 PWY-5028 L-histidine degradation II BMI_II926 PWY-5030 L-histidine degradation III BMI_II932 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) BMI_II932 PWY-6507 4-deoxy-L-threo-hex-4-enopyranuronate degradation BMI_II932 PWY-7242 D-fructuronate degradation BMI_II932 PWY-7310 D-glucosaminate degradation BMI_II933 PWY-7130 L-glucose degradation BMI_II934 PWY-5101 L-isoleucine biosynthesis II BMI_II934 PWY-5103 L-isoleucine biosynthesis III BMI_II934 PWY-5104 L-isoleucine biosynthesis IV BMI_II934 PWY-7111 pyruvate fermentation to isobutanol (engineered) BMI_II952 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) BMI_II952 PWY-7494 choline degradation IV BMI_II968 PWY-3781 aerobic respiration I (cytochrome c) BMI_II968 PWY-4521 arsenite oxidation I (respiratory) BMI_II968 PWY-6692 Fe(II) oxidation BMI_II968 PWY-7279 aerobic respiration II (cytochrome c) (yeast) BMI_II979 PWY-6167 flavin biosynthesis II (archaea) BMI_II99 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation