BC1001_3625	PWY-5482	pyruvate fermentation to acetate II
BC1001_3625	PWY-5485	pyruvate fermentation to acetate IV
BC1001_3625	PWY-5497	purine nucleobases degradation II (anaerobic)
BC1001_3634	PWY-1042	glycolysis IV (plant cytosol)
BC1001_3634	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BC1001_3634	PWY-5484	glycolysis II (from fructose 6-phosphate)
BC1001_3634	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BC1001_3634	PWY-7385	1,3-propanediol biosynthesis (engineered)
BC1001_3653	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BC1001_3653	PWY-5723	Rubisco shunt
BC1001_3653	PWY-6891	thiazole biosynthesis II (Bacillus)
BC1001_3653	PWY-6892	thiazole biosynthesis I (E. coli)
BC1001_3653	PWY-6901	superpathway of glucose and xylose degradation
BC1001_3653	PWY-7560	methylerythritol phosphate pathway II
BC1001_3662	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
BC1001_3666	PWY-622	starch biosynthesis
BC1001_3683	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BC1001_3683	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BC1001_3683	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BC1001_3683	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BC1001_3686	PWY-5194	siroheme biosynthesis
BC1001_3686	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BC1001_3688	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BC1001_3689	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BC1001_3690	PWY-6683	sulfate reduction III (assimilatory)
BC1001_3693	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BC1001_3700	PWY-6654	phosphopantothenate biosynthesis III
BC1001_3702	PWY-5913	TCA cycle VI (obligate autotrophs)
BC1001_3702	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
BC1001_3702	PWY-6638	sulfolactate degradation III
BC1001_3702	PWY-6642	(<i>R</i>)-cysteate degradation
BC1001_3702	PWY-6643	coenzyme M biosynthesis II
BC1001_3702	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BC1001_3702	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BC1001_3702	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BC1001_3724	PWY-5381	pyridine nucleotide cycling (plants)
BC1001_3770	PWY-5941	glycogen degradation II (eukaryotic)
BC1001_3770	PWY-6724	starch degradation II
BC1001_3770	PWY-6737	starch degradation V
BC1001_3770	PWY-7238	sucrose biosynthesis II
BC1001_3776	PWY-6749	CMP-legionaminate biosynthesis I
BC1001_3793	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BC1001_3823	PWY-5642	2,4-dinitrotoluene degradation
BC1001_3823	PWY-6373	acrylate degradation
BC1001_3829	PWY-5647	2-nitrobenzoate degradation I
BC1001_3829	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BC1001_3829	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BC1001_3829	PWY-6505	L-tryptophan degradation XII (Geobacillus)
BC1001_3832	PWY-5162	2-oxopentenoate degradation
BC1001_3832	PWY-5436	L-threonine degradation IV
BC1001_3832	PWY-5480	pyruvate fermentation to ethanol I
BC1001_3832	PWY-6587	pyruvate fermentation to ethanol III
BC1001_3832	PWY-7085	triethylamine degradation
BC1001_3832	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
BC1001_3864	PWY-6713	L-rhamnose degradation II
BC1001_3864	PWY-6714	L-rhamnose degradation III
BC1001_3869	PWY-6654	phosphopantothenate biosynthesis III
BC1001_3873	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BC1001_3881	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BC1001_3914	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
BC1001_3944	PWY-7158	L-phenylalanine degradation V
BC1001_3945	PWY-6148	tetrahydromethanopterin biosynthesis
BC1001_3948	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
BC1001_3950	PWY-5796	malonate decarboxylase activation
BC1001_3951	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
BC1001_3951	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BC1001_3953	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BC1001_3953	PWY-6148	tetrahydromethanopterin biosynthesis
BC1001_3953	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BC1001_3953	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BC1001_3957	PWY-1042	glycolysis IV (plant cytosol)
BC1001_3957	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BC1001_3957	PWY-5484	glycolysis II (from fructose 6-phosphate)
BC1001_3957	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BC1001_3957	PWY-7385	1,3-propanediol biosynthesis (engineered)
BC1001_3958	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BC1001_3958	PWY-5723	Rubisco shunt
BC1001_3958	PWY-6891	thiazole biosynthesis II (Bacillus)
BC1001_3958	PWY-6892	thiazole biosynthesis I (E. coli)
BC1001_3958	PWY-6901	superpathway of glucose and xylose degradation
BC1001_3958	PWY-7560	methylerythritol phosphate pathway II
BC1001_3959	PWY-5723	Rubisco shunt
BC1001_3960	PWY-5484	glycolysis II (from fructose 6-phosphate)
BC1001_3962	PWY-5532	adenosine nucleotides degradation IV
BC1001_3962	PWY-5723	Rubisco shunt
BC1001_3963	PWY-5532	adenosine nucleotides degradation IV
BC1001_3963	PWY-5723	Rubisco shunt
BC1001_3974	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
BC1001_3978	PWY-6420	pyrroloquinoline quinone biosynthesis
BC1001_3987	PWY-181	photorespiration
BC1001_3994	PWY-4381	fatty acid biosynthesis initiation I
BC1001_3994	PWY-5743	3-hydroxypropanoate cycle
BC1001_3994	PWY-5744	glyoxylate assimilation
BC1001_3994	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BC1001_3994	PWY-6679	jadomycin biosynthesis
BC1001_3994	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BC1001_4006	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
BC1001_4013	PWY-3781	aerobic respiration I (cytochrome c)
BC1001_4013	PWY-4521	arsenite oxidation I (respiratory)
BC1001_4013	PWY-6692	Fe(II) oxidation
BC1001_4013	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BC1001_4038	PWY-381	nitrate reduction II (assimilatory)
BC1001_4038	PWY-5675	nitrate reduction V (assimilatory)
BC1001_4038	PWY-6549	L-glutamine biosynthesis III
BC1001_4038	PWY-6963	ammonia assimilation cycle I
BC1001_4038	PWY-6964	ammonia assimilation cycle II
BC1001_4047	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BC1001_4047	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BC1001_4047	PWY-6164	3-dehydroquinate biosynthesis I
BC1001_4057	PWY-3162	L-tryptophan degradation V (side chain pathway)
BC1001_4057	PWY-5057	L-valine degradation II
BC1001_4057	PWY-5076	L-leucine degradation III
BC1001_4057	PWY-5078	L-isoleucine degradation II
BC1001_4057	PWY-5079	L-phenylalanine degradation III
BC1001_4057	PWY-5082	L-methionine degradation III
BC1001_4057	PWY-5480	pyruvate fermentation to ethanol I
BC1001_4057	PWY-5486	pyruvate fermentation to ethanol II
BC1001_4057	PWY-5751	phenylethanol biosynthesis
BC1001_4057	PWY-6028	acetoin degradation
BC1001_4057	PWY-6313	serotonin degradation
BC1001_4057	PWY-6333	acetaldehyde biosynthesis I
BC1001_4057	PWY-6342	noradrenaline and adrenaline degradation
BC1001_4057	PWY-6587	pyruvate fermentation to ethanol III
BC1001_4057	PWY-6802	salidroside biosynthesis
BC1001_4057	PWY-6871	3-methylbutanol biosynthesis
BC1001_4057	PWY-7013	L-1,2-propanediol degradation
BC1001_4057	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BC1001_4057	PWY-7118	chitin degradation to ethanol
BC1001_4057	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BC1001_4057	PWY-7557	dehydrodiconiferyl alcohol degradation
BC1001_4096	PWY-6807	xyloglucan degradation II (exoglucanase)
BC1001_4109	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BC1001_4110	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BC1001_4110	PWY-6416	quinate degradation II
BC1001_4110	PWY-6707	gallate biosynthesis
BC1001_4147	PWY-5022	4-aminobutanoate degradation V
BC1001_4147	PWY-6728	methylaspartate cycle
BC1001_4147	PWY-7126	ethylene biosynthesis IV
BC1001_4157	PWY-1361	benzoyl-CoA degradation I (aerobic)
BC1001_4157	PWY-3602	L-carnitine degradation II
BC1001_4157	PWY-5109	2-methylbutanoate biosynthesis
BC1001_4157	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BC1001_4157	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BC1001_4157	PWY-5177	glutaryl-CoA degradation
BC1001_4157	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BC1001_4157	PWY-6435	4-hydroxybenzoate biosynthesis V
BC1001_4157	PWY-6583	pyruvate fermentation to butanol I
BC1001_4157	PWY-6863	pyruvate fermentation to hexanol
BC1001_4157	PWY-6883	pyruvate fermentation to butanol II
BC1001_4157	PWY-6944	androstenedione degradation
BC1001_4157	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BC1001_4157	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BC1001_4157	PWY-7007	methyl ketone biosynthesis
BC1001_4157	PWY-7046	4-coumarate degradation (anaerobic)
BC1001_4157	PWY-7094	fatty acid salvage
BC1001_4157	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BC1001_4157	PWY-735	jasmonic acid biosynthesis
BC1001_4157	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BC1001_4157	PWY-7472	D-carnitine degradation II
BC1001_4170	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BC1001_4188	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BC1001_4188	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BC1001_4215	PWY-6654	phosphopantothenate biosynthesis III
BC1001_4217	PWY-6556	pyrimidine ribonucleosides salvage II
BC1001_4217	PWY-7181	pyrimidine deoxyribonucleosides degradation
BC1001_4217	PWY-7193	pyrimidine ribonucleosides salvage I
BC1001_4217	PWY-7199	pyrimidine deoxyribonucleosides salvage
BC1001_4251	PWY-7310	D-glucosaminate degradation
BC1001_4262	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BC1001_4292	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BC1001_4293	PWY-6123	inosine-5'-phosphate biosynthesis I
BC1001_4293	PWY-6124	inosine-5'-phosphate biosynthesis II
BC1001_4293	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BC1001_4293	PWY-7234	inosine-5'-phosphate biosynthesis III
BC1001_4297	PWY-5663	tetrahydrobiopterin biosynthesis I
BC1001_4297	PWY-5664	tetrahydrobiopterin biosynthesis II
BC1001_4297	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BC1001_4297	PWY-6703	preQ<sub>0</sub> biosynthesis
BC1001_4297	PWY-6983	tetrahydrobiopterin biosynthesis III
BC1001_4297	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BC1001_4306	PWY-4041	&gamma;-glutamyl cycle
BC1001_4306	PWY-5826	hypoglycin biosynthesis
BC1001_4348	PWY-6157	autoinducer AI-1 biosynthesis
BC1001_4352	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BC1001_4367	PWY-5451	acetone degradation I (to methylglyoxal)
BC1001_4367	PWY-6588	pyruvate fermentation to acetone
BC1001_4367	PWY-6876	isopropanol biosynthesis
BC1001_4367	PWY-7466	acetone degradation III (to propane-1,2-diol)
BC1001_4444	PWY-7425	2-chloroacrylate degradation I
BC1001_4456	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BC1001_4456	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BC1001_4456	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BC1001_4456	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BC1001_4469	PWY-5692	allantoin degradation to glyoxylate II
BC1001_4469	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
BC1001_4472	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BC1001_4472	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BC1001_4495	PWY-6454	vancomycin resistance I
BC1001_4495	PWY-6455	vancomycin resistance II
BC1001_4509	PWY-4381	fatty acid biosynthesis initiation I
BC1001_4524	PWY-5169	cyanurate degradation
BC1001_4524	PWY-5703	urea degradation I
BC1001_4525	PWY-5169	cyanurate degradation
BC1001_4525	PWY-5703	urea degradation I
BC1001_4525	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BC1001_4546	PWY-6497	D-galactarate degradation II
BC1001_4546	PWY-6499	D-glucarate degradation II
BC1001_4547	PWY-6499	D-glucarate degradation II
BC1001_4557	PWY-5913	TCA cycle VI (obligate autotrophs)
BC1001_4557	PWY-6549	L-glutamine biosynthesis III
BC1001_4557	PWY-6728	methylaspartate cycle
BC1001_4557	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_4557	PWY-7124	ethylene biosynthesis V (engineered)
BC1001_4557	PWY-7254	TCA cycle VII (acetate-producers)
BC1001_4557	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BC1001_4609	PWY-6012	acyl carrier protein metabolism I
BC1001_4609	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BC1001_4624	PWY-3801	sucrose degradation II (sucrose synthase)
BC1001_4624	PWY-6527	stachyose degradation
BC1001_4624	PWY-6981	chitin biosynthesis
BC1001_4624	PWY-7238	sucrose biosynthesis II
BC1001_4624	PWY-7343	UDP-glucose biosynthesis
BC1001_4648	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BC1001_4652	PWY-5101	L-isoleucine biosynthesis II
BC1001_4652	PWY-5103	L-isoleucine biosynthesis III
BC1001_4652	PWY-5104	L-isoleucine biosynthesis IV
BC1001_4652	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BC1001_4708	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BC1001_4710	PWY-5941	glycogen degradation II (eukaryotic)
BC1001_4710	PWY-6724	starch degradation II
BC1001_4710	PWY-6737	starch degradation V
BC1001_4710	PWY-7238	sucrose biosynthesis II
BC1001_4750	PWY-5152	leucodelphinidin biosynthesis
BC1001_4753	PWY-7560	methylerythritol phosphate pathway II
BC1001_4759	PWY-6098	diploterol and cycloartenol biosynthesis
BC1001_4759	PWY-7072	hopanoid biosynthesis (bacteria)
BC1001_4772	PWY-4202	arsenate detoxification I (glutaredoxin)
BC1001_4772	PWY-4621	arsenate detoxification II (glutaredoxin)
BC1001_4781	PWY-7378	aminopropanol phosphate biosynthesis II
BC1001_4802	PWY-6832	2-aminoethylphosphonate degradation II
BC1001_4805	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BC1001_4805	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BC1001_4826	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
BC1001_4826	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BC1001_4832	PWY-5392	reductive TCA cycle II
BC1001_4832	PWY-5537	pyruvate fermentation to acetate V
BC1001_4832	PWY-5538	pyruvate fermentation to acetate VI
BC1001_4832	PWY-5690	TCA cycle II (plants and fungi)
BC1001_4832	PWY-5913	TCA cycle VI (obligate autotrophs)
BC1001_4832	PWY-6728	methylaspartate cycle
BC1001_4832	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_4832	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BC1001_4848	PWY-1361	benzoyl-CoA degradation I (aerobic)
BC1001_4848	PWY-5109	2-methylbutanoate biosynthesis
BC1001_4848	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BC1001_4848	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BC1001_4848	PWY-5177	glutaryl-CoA degradation
BC1001_4848	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BC1001_4848	PWY-6435	4-hydroxybenzoate biosynthesis V
BC1001_4848	PWY-6583	pyruvate fermentation to butanol I
BC1001_4848	PWY-6863	pyruvate fermentation to hexanol
BC1001_4848	PWY-6883	pyruvate fermentation to butanol II
BC1001_4848	PWY-6944	androstenedione degradation
BC1001_4848	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BC1001_4848	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BC1001_4848	PWY-7007	methyl ketone biosynthesis
BC1001_4848	PWY-7046	4-coumarate degradation (anaerobic)
BC1001_4848	PWY-7094	fatty acid salvage
BC1001_4848	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BC1001_4848	PWY-735	jasmonic acid biosynthesis
BC1001_4848	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BC1001_4885	PWY-1622	formaldehyde assimilation I (serine pathway)
BC1001_4885	PWY-5392	reductive TCA cycle II
BC1001_4885	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BC1001_4885	PWY-5690	TCA cycle II (plants and fungi)
BC1001_4885	PWY-5913	TCA cycle VI (obligate autotrophs)
BC1001_4885	PWY-6728	methylaspartate cycle
BC1001_4885	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_4885	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BC1001_4885	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BC1001_4889	PWY-3781	aerobic respiration I (cytochrome c)
BC1001_4889	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BC1001_4889	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BC1001_4889	PWY-5690	TCA cycle II (plants and fungi)
BC1001_4889	PWY-6728	methylaspartate cycle
BC1001_4889	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_4889	PWY-7254	TCA cycle VII (acetate-producers)
BC1001_4889	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BC1001_4890	PWY-3781	aerobic respiration I (cytochrome c)
BC1001_4890	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BC1001_4890	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BC1001_4890	PWY-5690	TCA cycle II (plants and fungi)
BC1001_4890	PWY-6728	methylaspartate cycle
BC1001_4890	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_4890	PWY-7254	TCA cycle VII (acetate-producers)
BC1001_4890	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BC1001_4899	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BC1001_4900	PWY-2941	L-lysine biosynthesis II
BC1001_4900	PWY-2942	L-lysine biosynthesis III
BC1001_4900	PWY-5097	L-lysine biosynthesis VI
BC1001_4900	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BC1001_4900	PWY-6559	spermidine biosynthesis II
BC1001_4900	PWY-6562	norspermidine biosynthesis
BC1001_4900	PWY-7153	grixazone biosynthesis
BC1001_4900	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BC1001_4907	PWY-4381	fatty acid biosynthesis initiation I
BC1001_4907	PWY-5743	3-hydroxypropanoate cycle
BC1001_4907	PWY-5744	glyoxylate assimilation
BC1001_4907	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BC1001_4907	PWY-6679	jadomycin biosynthesis
BC1001_4907	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BC1001_4908	PWY-2161	folate polyglutamylation
BC1001_4911	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BC1001_4911	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BC1001_4911	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BC1001_4911	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BC1001_4917	PWY-2661	trehalose biosynthesis V
BC1001_4918	PWY-5941	glycogen degradation II (eukaryotic)
BC1001_4918	PWY-6724	starch degradation II
BC1001_4918	PWY-6737	starch degradation V
BC1001_4918	PWY-7238	sucrose biosynthesis II
BC1001_4919	PWY-2661	trehalose biosynthesis V
BC1001_4921	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BC1001_4921	PWY-622	starch biosynthesis
BC1001_4922	PWY-2622	trehalose biosynthesis IV
BC1001_4940	PWY-702	L-methionine biosynthesis II
BC1001_4942	PWY-6617	adenosine nucleotides degradation III
BC1001_4950	PWY-5350	thiosulfate disproportionation III (rhodanese)
BC1001_4954	PWY-6891	thiazole biosynthesis II (Bacillus)
BC1001_4954	PWY-6892	thiazole biosynthesis I (E. coli)
BC1001_4954	PWY-7560	methylerythritol phosphate pathway II
BC1001_4955	PWY-5663	tetrahydrobiopterin biosynthesis I
BC1001_4955	PWY-5664	tetrahydrobiopterin biosynthesis II
BC1001_4955	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BC1001_4955	PWY-6703	preQ<sub>0</sub> biosynthesis
BC1001_4955	PWY-6983	tetrahydrobiopterin biosynthesis III
BC1001_4955	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BC1001_4975	PWY-3781	aerobic respiration I (cytochrome c)
BC1001_4975	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BC1001_4975	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BC1001_4975	PWY-5690	TCA cycle II (plants and fungi)
BC1001_4975	PWY-6728	methylaspartate cycle
BC1001_4975	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_4975	PWY-7254	TCA cycle VII (acetate-producers)
BC1001_4975	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BC1001_4976	PWY-3781	aerobic respiration I (cytochrome c)
BC1001_4976	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BC1001_4976	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BC1001_4976	PWY-5690	TCA cycle II (plants and fungi)
BC1001_4976	PWY-6728	methylaspartate cycle
BC1001_4976	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_4976	PWY-7254	TCA cycle VII (acetate-producers)
BC1001_4976	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BC1001_5024	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BC1001_5024	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BC1001_5033	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BC1001_5033	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BC1001_5063	PWY-2723	trehalose degradation V
BC1001_5063	PWY-6317	galactose degradation I (Leloir pathway)
BC1001_5063	PWY-6737	starch degradation V
BC1001_5108	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
BC1001_5110	PWY-6891	thiazole biosynthesis II (Bacillus)
BC1001_5110	PWY-6892	thiazole biosynthesis I (E. coli)
BC1001_5110	PWY-7560	methylerythritol phosphate pathway II
BC1001_5144	PWY-7425	2-chloroacrylate degradation I
BC1001_5169	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
BC1001_5183	PWY-6695	oxalate degradation II
BC1001_5184	PWY-5392	reductive TCA cycle II
BC1001_5184	PWY-5537	pyruvate fermentation to acetate V
BC1001_5184	PWY-5538	pyruvate fermentation to acetate VI
BC1001_5184	PWY-5690	TCA cycle II (plants and fungi)
BC1001_5184	PWY-5913	TCA cycle VI (obligate autotrophs)
BC1001_5184	PWY-6728	methylaspartate cycle
BC1001_5184	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_5184	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BC1001_5192	PWY-6654	phosphopantothenate biosynthesis III
BC1001_5203	PWY-5757	fosfomycin biosynthesis
BC1001_5203	PWY-6322	phosphinothricin tripeptide biosynthesis
BC1001_5203	PWY-6682	dehydrophos biosynthesis
BC1001_5203	PWY-6839	2-aminoethylphosphonate biosynthesis
BC1001_5203	PWY-7419	FR-900098 and FR-33289 antibiotics biosynthesis
BC1001_5203	PWY-7510	rhizocticin A and B biosynthesis
BC1001_5204	PWY-5757	fosfomycin biosynthesis
BC1001_5204	PWY-6322	phosphinothricin tripeptide biosynthesis
BC1001_5204	PWY-6682	dehydrophos biosynthesis
BC1001_5204	PWY-6839	2-aminoethylphosphonate biosynthesis
BC1001_5204	PWY-7510	rhizocticin A and B biosynthesis
BC1001_5205	PWY-6832	2-aminoethylphosphonate degradation II
BC1001_5232	PWY-5941	glycogen degradation II (eukaryotic)
BC1001_5232	PWY-622	starch biosynthesis
BC1001_5232	PWY-6731	starch degradation III
BC1001_5232	PWY-6737	starch degradation V
BC1001_5232	PWY-7238	sucrose biosynthesis II
BC1001_5238	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BC1001_5238	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BC1001_5266	PWY-5532	adenosine nucleotides degradation IV
BC1001_5276	PWY-1361	benzoyl-CoA degradation I (aerobic)
BC1001_5276	PWY-2361	3-oxoadipate degradation
BC1001_5276	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BC1001_5286	PWY-5686	UMP biosynthesis
BC1001_5287	PWY-2941	L-lysine biosynthesis II
BC1001_5287	PWY-2942	L-lysine biosynthesis III
BC1001_5287	PWY-5097	L-lysine biosynthesis VI
BC1001_5294	PWY-5350	thiosulfate disproportionation III (rhodanese)
BC1001_5323	PWY-6788	cellulose degradation II (fungi)
BC1001_5325	PWY-1001	cellulose biosynthesis
BC1001_5340	PWY-5642	2,4-dinitrotoluene degradation
BC1001_5340	PWY-6373	acrylate degradation
BC1001_5367	PWY-5669	phosphatidylethanolamine biosynthesis I
BC1001_5380	PWY-5381	pyridine nucleotide cycling (plants)
BC1001_5380	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BC1001_5387	PWY-3781	aerobic respiration I (cytochrome c)
BC1001_5387	PWY-4521	arsenite oxidation I (respiratory)
BC1001_5387	PWY-6692	Fe(II) oxidation
BC1001_5387	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BC1001_5398	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BC1001_5429	PWY-5101	L-isoleucine biosynthesis II
BC1001_5429	PWY-5103	L-isoleucine biosynthesis III
BC1001_5429	PWY-5104	L-isoleucine biosynthesis IV
BC1001_5429	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BC1001_5434	PWY-3781	aerobic respiration I (cytochrome c)
BC1001_5434	PWY-4521	arsenite oxidation I (respiratory)
BC1001_5434	PWY-6692	Fe(II) oxidation
BC1001_5434	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BC1001_5434	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
BC1001_5448	PWY-5659	GDP-mannose biosynthesis
BC1001_5448	PWY-6073	alginate biosynthesis I (algal)
BC1001_5448	PWY-6082	alginate biosynthesis II (bacterial)
BC1001_5448	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
BC1001_5449	PWY-6655	xanthan biosynthesis
BC1001_5449	PWY-6658	acetan biosynthesis
BC1001_5460	PWY-7425	2-chloroacrylate degradation I
BC1001_5497	PWY-2582	brassinosteroid biosynthesis II
BC1001_5497	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BC1001_5497	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BC1001_5497	PWY-6948	sitosterol degradation to androstenedione
BC1001_5497	PWY-699	brassinosteroid biosynthesis I
BC1001_5497	PWY-7299	progesterone biosynthesis
BC1001_5509	PWY-6832	2-aminoethylphosphonate degradation II
BC1001_5555	PWY-4381	fatty acid biosynthesis initiation I
BC1001_5555	PWY-6799	fatty acid biosynthesis (plant mitochondria)
BC1001_5555	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BC1001_5556	PWY-5796	malonate decarboxylase activation
BC1001_5557	PWY-6060	malonate degradation II (biotin-dependent)
BC1001_5558	PWY-4381	fatty acid biosynthesis initiation I
BC1001_5558	PWY-5743	3-hydroxypropanoate cycle
BC1001_5558	PWY-5744	glyoxylate assimilation
BC1001_5558	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BC1001_5558	PWY-6060	malonate degradation II (biotin-dependent)
BC1001_5558	PWY-6679	jadomycin biosynthesis
BC1001_5558	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BC1001_5560	PWY-5796	malonate decarboxylase activation
BC1001_5561	PWY-5794	malonate degradation I (biotin-independent)
BC1001_5561	PWY-6060	malonate degradation II (biotin-dependent)
BC1001_5567	PWY-7153	grixazone biosynthesis
BC1001_5568	PWY-6825	phosphatidylcholine biosynthesis V
BC1001_5581	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BC1001_5581	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BC1001_5591	PWY-5101	L-isoleucine biosynthesis II
BC1001_5591	PWY-5103	L-isoleucine biosynthesis III
BC1001_5591	PWY-5104	L-isoleucine biosynthesis IV
BC1001_5591	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BC1001_5598	PWY-6497	D-galactarate degradation II
BC1001_5598	PWY-6499	D-glucarate degradation II
BC1001_5599	PWY-6497	D-galactarate degradation II
BC1001_5613	PWY-7560	methylerythritol phosphate pathway II
BC1001_5632	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BC1001_5658	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BC1001_5658	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BC1001_5658	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BC1001_5658	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BC1001_5658	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BC1001_5658	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BC1001_5658	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BC1001_5658	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BC1001_5686	PWY-6168	flavin biosynthesis III (fungi)
BC1001_5686	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BC1001_5703	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BC1001_5703	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BC1001_5711	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BC1001_5711	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BC1001_5762	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
BC1001_5801	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BC1001_5801	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
BC1001_5803	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BC1001_5803	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BC1001_5803	PWY-6268	adenosylcobalamin salvage from cobalamin
BC1001_5803	PWY-6269	adenosylcobalamin salvage from cobinamide II
BC1001_5805	PWY-5194	siroheme biosynthesis
BC1001_5805	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BC1001_5825	PWY-3661	glycine betaine degradation I
BC1001_5825	PWY-4722	creatinine degradation II
BC1001_5826	PWY-3661	glycine betaine degradation I
BC1001_5826	PWY-4722	creatinine degradation II
BC1001_5827	PWY-3661	glycine betaine degradation I
BC1001_5827	PWY-4722	creatinine degradation II
BC1001_5828	PWY-3661	glycine betaine degradation I
BC1001_5828	PWY-4722	creatinine degradation II
BC1001_5832	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BC1001_5832	PWY-7494	choline degradation IV
BC1001_5833	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BC1001_5833	PWY-7494	choline degradation IV
BC1001_5837	PWY-1622	formaldehyde assimilation I (serine pathway)
BC1001_5837	PWY-181	photorespiration
BC1001_5837	PWY-2161	folate polyglutamylation
BC1001_5837	PWY-2201	folate transformations I
BC1001_5837	PWY-3661	glycine betaine degradation I
BC1001_5837	PWY-3661-1	glycine betaine degradation II (mammalian)
BC1001_5837	PWY-3841	folate transformations II
BC1001_5837	PWY-5497	purine nucleobases degradation II (anaerobic)
BC1001_5838	PWY-7533	gliotoxin biosynthesis
BC1001_5847	PWY-2201	folate transformations I
BC1001_5847	PWY-5497	purine nucleobases degradation II (anaerobic)
BC1001_5853	PWY-1281	sulfoacetaldehyde degradation I
BC1001_5853	PWY-5482	pyruvate fermentation to acetate II
BC1001_5853	PWY-5485	pyruvate fermentation to acetate IV
BC1001_5853	PWY-5497	purine nucleobases degradation II (anaerobic)
BC1001_5853	PWY-6637	sulfolactate degradation II
BC1001_5854	PWY-5676	acetyl-CoA fermentation to butanoate II
BC1001_5854	PWY-5741	ethylmalonyl-CoA pathway
BC1001_5854	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BC1001_5938	PWY-1361	benzoyl-CoA degradation I (aerobic)
BC1001_5938	PWY-2361	3-oxoadipate degradation
BC1001_5938	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BC1001_5941	PWY-1361	benzoyl-CoA degradation I (aerobic)
BC1001_5941	PWY-5109	2-methylbutanoate biosynthesis
BC1001_5941	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BC1001_5941	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BC1001_5941	PWY-5177	glutaryl-CoA degradation
BC1001_5941	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BC1001_5941	PWY-6435	4-hydroxybenzoate biosynthesis V
BC1001_5941	PWY-6583	pyruvate fermentation to butanol I
BC1001_5941	PWY-6863	pyruvate fermentation to hexanol
BC1001_5941	PWY-6883	pyruvate fermentation to butanol II
BC1001_5941	PWY-6944	androstenedione degradation
BC1001_5941	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BC1001_5941	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BC1001_5941	PWY-7007	methyl ketone biosynthesis
BC1001_5941	PWY-7046	4-coumarate degradation (anaerobic)
BC1001_5941	PWY-7094	fatty acid salvage
BC1001_5941	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BC1001_5941	PWY-735	jasmonic acid biosynthesis
BC1001_5941	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BC1001_5942	PWY-5392	reductive TCA cycle II
BC1001_5942	PWY-5537	pyruvate fermentation to acetate V
BC1001_5942	PWY-5538	pyruvate fermentation to acetate VI
BC1001_5942	PWY-5690	TCA cycle II (plants and fungi)
BC1001_5942	PWY-5913	TCA cycle VI (obligate autotrophs)
BC1001_5942	PWY-6728	methylaspartate cycle
BC1001_5942	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BC1001_5942	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BC1001_5953	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BC1001_5956	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BC1001_5956	PWY-5723	Rubisco shunt
BC1001_5956	PWY-6891	thiazole biosynthesis II (Bacillus)
BC1001_5956	PWY-6892	thiazole biosynthesis I (E. coli)
BC1001_5956	PWY-6901	superpathway of glucose and xylose degradation
BC1001_5956	PWY-7560	methylerythritol phosphate pathway II
BC1001_5961	PWY-4261	glycerol degradation I
BC1001_5992	PWY-5101	L-isoleucine biosynthesis II
BC1001_5992	PWY-5103	L-isoleucine biosynthesis III
BC1001_5992	PWY-5104	L-isoleucine biosynthesis IV
BC1001_5992	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BC1001_5992	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BC1001_5992	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BC1001_5992	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BC1001_6016	PWY-6655	xanthan biosynthesis
BC1001_6016	PWY-6658	acetan biosynthesis
BC1001_6029	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BC1001_6046	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BC1001_6073	PWY-3561	choline biosynthesis III
BC1001_6073	PWY-7039	phosphatidate metabolism, as a signaling molecule
