Bcen_5528 PWY-6654 phosphopantothenate biosynthesis III Bcen_5532 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Bcen_5549 PWY-381 nitrate reduction II (assimilatory) Bcen_5549 PWY-5675 nitrate reduction V (assimilatory) Bcen_5549 PWY-6549 L-glutamine biosynthesis III Bcen_5549 PWY-6963 ammonia assimilation cycle I Bcen_5549 PWY-6964 ammonia assimilation cycle II Bcen_5557 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Bcen_5558 PWY-5169 cyanurate degradation Bcen_5558 PWY-5703 urea degradation I Bcen_5585 PWY-6654 phosphopantothenate biosynthesis III Bcen_5611 PWY-5651 L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde Bcen_5611 PWY-6309 L-tryptophan degradation XI (mammalian, via kynurenine) Bcen_5647 PWY-5080 very long chain fatty acid biosynthesis I Bcen_5647 PWY-6433 hydroxylated fatty acid biosynthesis (plants) Bcen_5647 PWY-7036 very long chain fatty acid biosynthesis II Bcen_5658 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bcen_5658 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bcen_5682 PWY-5451 acetone degradation I (to methylglyoxal) Bcen_5682 PWY-6588 pyruvate fermentation to acetone Bcen_5682 PWY-6876 isopropanol biosynthesis Bcen_5682 PWY-7466 acetone degradation III (to propane-1,2-diol) Bcen_5698 PWY-6098 diploterol and cycloartenol biosynthesis Bcen_5698 PWY-7072 hopanoid biosynthesis (bacteria) Bcen_5754 PWY-6986 alginate degradation Bcen_5766 PWY-6785 hydrogen production VIII Bcen_5785 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bcen_5785 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bcen_5832 PWY-7219 adenosine ribonucleotides de novo biosynthesis Bcen_5852 PWY-4041 γ-glutamyl cycle Bcen_5852 PWY-5826 hypoglycin biosynthesis Bcen_5866 PWY-5913 TCA cycle VI (obligate autotrophs) Bcen_5866 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Bcen_5866 PWY-6638 sulfolactate degradation III Bcen_5866 PWY-6642 (R)-cysteate degradation Bcen_5866 PWY-6643 coenzyme M biosynthesis II Bcen_5866 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Bcen_5866 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Bcen_5866 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Bcen_5881 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bcen_5881 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bcen_5883 PWY-5392 reductive TCA cycle II Bcen_5883 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Bcen_5883 PWY-5690 TCA cycle II (plants and fungi) Bcen_5883 PWY-5913 TCA cycle VI (obligate autotrophs) Bcen_5883 PWY-6728 methylaspartate cycle Bcen_5883 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bcen_5883 PWY-7254 TCA cycle VII (acetate-producers) Bcen_5883 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Bcen_5886 PWY-6672 cis-genanyl-CoA degradation Bcen_5886 PWY-7118 chitin degradation to ethanol Bcen_5903 PWY-6012 acyl carrier protein metabolism I Bcen_5903 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Bcen_5905 PWY-5028 L-histidine degradation II Bcen_5905 PWY-5030 L-histidine degradation III Bcen_5907 PWY-5028 L-histidine degradation II Bcen_5907 PWY-5030 L-histidine degradation III Bcen_5909 PWY-5028 L-histidine degradation II Bcen_5909 PWY-5030 L-histidine degradation III Bcen_5914 PWY-381 nitrate reduction II (assimilatory) Bcen_5914 PWY-5675 nitrate reduction V (assimilatory) Bcen_5914 PWY-6549 L-glutamine biosynthesis III Bcen_5914 PWY-6963 ammonia assimilation cycle I Bcen_5914 PWY-6964 ammonia assimilation cycle II Bcen_5921 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Bcen_5928 PWY-381 nitrate reduction II (assimilatory) Bcen_5928 PWY-5675 nitrate reduction V (assimilatory) Bcen_5928 PWY-6549 L-glutamine biosynthesis III Bcen_5928 PWY-6963 ammonia assimilation cycle I Bcen_5928 PWY-6964 ammonia assimilation cycle II Bcen_5934 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bcen_5934 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bcen_5937 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Bcen_5937 PWY-2201 folate transformations I Bcen_5937 PWY-3841 folate transformations II Bcen_5937 PWY-5030 L-histidine degradation III Bcen_5937 PWY-5497 purine nucleobases degradation II (anaerobic) Bcen_5937 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Bcen_5940 PWY-6891 thiazole biosynthesis II (Bacillus) Bcen_5940 PWY-6892 thiazole biosynthesis I (E. coli) Bcen_5940 PWY-7560 methylerythritol phosphate pathway II Bcen_5942 PWY-5046 2-oxoisovalerate decarboxylation to isobutanoyl-CoA Bcen_5942 PWY-5084 2-oxoglutarate decarboxylation to succinyl-CoA Bcen_5951 PWY-6823 molybdenum cofactor biosynthesis Bcen_5951 PWY-6891 thiazole biosynthesis II (Bacillus) Bcen_5951 PWY-6892 thiazole biosynthesis I (E. coli) Bcen_5951 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Bcen_5968 PWY-7176 UTP and CTP de novo biosynthesis Bcen_5968 PWY-7177 UTP and CTP dephosphorylation II Bcen_5968 PWY-7185 UTP and CTP dephosphorylation I Bcen_5969 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Bcen_5969 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Bcen_5970 PWY-1042 glycolysis IV (plant cytosol) Bcen_5970 PWY-1622 formaldehyde assimilation I (serine pathway) Bcen_5970 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Bcen_5970 PWY-5484 glycolysis II (from fructose 6-phosphate) Bcen_5970 PWY-5723 Rubisco shunt Bcen_5970 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Bcen_5970 PWY-6886 1-butanol autotrophic biosynthesis Bcen_5970 PWY-6901 superpathway of glucose and xylose degradation Bcen_5970 PWY-7003 glycerol degradation to butanol Bcen_5970 PWY-7124 ethylene biosynthesis V (engineered) Bcen_5970 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Bcen_5982 PWY-2941 L-lysine biosynthesis II Bcen_5982 PWY-2942 L-lysine biosynthesis III Bcen_5982 PWY-5097 L-lysine biosynthesis VI Bcen_5992 PWY-2301 myo-inositol biosynthesis Bcen_5992 PWY-4702 phytate degradation I Bcen_5992 PWY-6363 D-myo-inositol (1,4,5)-trisphosphate degradation Bcen_5994 PWY-6936 seleno-amino acid biosynthesis Bcen_5994 PWY-7274 D-cycloserine biosynthesis Bcen_6001 PWY-4381 fatty acid biosynthesis initiation I Bcen_6001 PWY-5743 3-hydroxypropanoate cycle Bcen_6001 PWY-5744 glyoxylate assimilation Bcen_6001 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Bcen_6001 PWY-6679 jadomycin biosynthesis Bcen_6001 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Bcen_6003 PWY-2941 L-lysine biosynthesis II Bcen_6003 PWY-2942 L-lysine biosynthesis III Bcen_6003 PWY-5097 L-lysine biosynthesis VI Bcen_6003 PWY-6559 spermidine biosynthesis II Bcen_6003 PWY-6562 norspermidine biosynthesis Bcen_6003 PWY-7153 grixazone biosynthesis Bcen_6007 PWY-3781 aerobic respiration I (cytochrome c) Bcen_6007 PWY-4521 arsenite oxidation I (respiratory) Bcen_6007 PWY-6692 Fe(II) oxidation Bcen_6007 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Bcen_6007 PWY-7544 pyruvate to cytochrome bo oxidase electron transfer Bcen_6021 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Bcen_6025 PWY-6728 methylaspartate cycle Bcen_6025 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bcen_6025 PWY-7118 chitin degradation to ethanol Bcen_6025 PWY-7294 xylose degradation IV Bcen_6025 PWY-7295 L-arabinose degradation IV Bcen_6026 PWY-7425 2-chloroacrylate degradation I Bcen_6029 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bcen_6036 PWY-6910 hydroxymethylpyrimidine salvage Bcen_6036 PWY-7356 thiamin salvage IV (yeast) Bcen_6036 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Bcen_6038 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Bcen_6064 PWY-7560 methylerythritol phosphate pathway II Bcen_6069 PWY-5971 palmitate biosynthesis II (bacteria and plants) Bcen_6069 PWY-5973 cis-vaccenate biosynthesis Bcen_6069 PWY-5989 stearate biosynthesis II (bacteria and plants) Bcen_6069 PWY-5994 palmitate biosynthesis I (animals and fungi) Bcen_6069 PWY-6113 superpathway of mycolate biosynthesis Bcen_6069 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Bcen_6069 PWY-6519 8-amino-7-oxononanoate biosynthesis I Bcen_6069 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Bcen_6069 PWYG-321 mycolate biosynthesis Bcen_6075 PWY-5484 glycolysis II (from fructose 6-phosphate) Bcen_6086 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Bcen_6086 PWY-6596 adenosine nucleotides degradation I Bcen_6086 PWY-7221 guanosine ribonucleotides de novo biosynthesis Bcen_6088 PWY-7221 guanosine ribonucleotides de novo biosynthesis Bcen_6113 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bcen_6113 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bcen_6115 PWY-5691 urate degradation to allantoin I Bcen_6115 PWY-7394 urate degradation to allantoin II Bcen_6116 PWY-5697 allantoin degradation to ureidoglycolate I (urea producing) Bcen_6117 PWY-5694 allantoin degradation to glyoxylate I Bcen_6117 PWY-5705 allantoin degradation to glyoxylate III Bcen_6121 PWY-5691 urate degradation to allantoin I Bcen_6121 PWY-7394 urate degradation to allantoin II Bcen_6134 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Bcen_6136 PWY-7560 methylerythritol phosphate pathway II Bcen_6137 PWY-7560 methylerythritol phosphate pathway II Bcen_6152 PWY-6654 phosphopantothenate biosynthesis III Bcen_6162 PWY-3801 sucrose degradation II (sucrose synthase) Bcen_6162 PWY-5054 sorbitol biosynthesis I Bcen_6162 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Bcen_6162 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Bcen_6162 PWY-5659 GDP-mannose biosynthesis Bcen_6162 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Bcen_6162 PWY-621 sucrose degradation III (sucrose invertase) Bcen_6162 PWY-622 starch biosynthesis Bcen_6162 PWY-6531 mannitol cycle Bcen_6162 PWY-6981 chitin biosynthesis Bcen_6162 PWY-7238 sucrose biosynthesis II Bcen_6162 PWY-7347 sucrose biosynthesis III Bcen_6162 PWY-7385 1,3-propanediol biosynthesis (engineered) Bcen_6163 PWY-6938 NADH repair Bcen_6165 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Bcen_6165 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Bcen_6165 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Bcen_6173 PWY-1361 benzoyl-CoA degradation I (aerobic) Bcen_6173 PWY-5109 2-methylbutanoate biosynthesis Bcen_6173 PWY-5136 fatty acid β-oxidation II (peroxisome) Bcen_6173 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Bcen_6173 PWY-5177 glutaryl-CoA degradation Bcen_6173 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Bcen_6173 PWY-6435 4-hydroxybenzoate biosynthesis V Bcen_6173 PWY-6583 pyruvate fermentation to butanol I Bcen_6173 PWY-6863 pyruvate fermentation to hexanol Bcen_6173 PWY-6883 pyruvate fermentation to butanol II Bcen_6173 PWY-6944 androstenedione degradation Bcen_6173 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Bcen_6173 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Bcen_6173 PWY-7007 methyl ketone biosynthesis Bcen_6173 PWY-7046 4-coumarate degradation (anaerobic) Bcen_6173 PWY-7094 fatty acid salvage Bcen_6173 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Bcen_6173 PWY-735 jasmonic acid biosynthesis Bcen_6173 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Bcen_6186 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Bcen_6186 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Bcen_6186 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Bcen_6186 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Bcen_6186 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Bcen_6186 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Bcen_6227 PWY-6823 molybdenum cofactor biosynthesis Bcen_6229 PWY-6823 molybdenum cofactor biosynthesis Bcen_6238 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Bcen_6238 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Bcen_6238 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Bcen_6243 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Bcen_6243 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Bcen_6243 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Bcen_6250 PWY-7219 adenosine ribonucleotides de novo biosynthesis Bcen_6256 PWY-5381 pyridine nucleotide cycling (plants) Bcen_6256 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Bcen_6256 PWY-6596 adenosine nucleotides degradation I Bcen_6256 PWY-6606 guanosine nucleotides degradation II Bcen_6256 PWY-6607 guanosine nucleotides degradation I Bcen_6256 PWY-6608 guanosine nucleotides degradation III Bcen_6256 PWY-7185 UTP and CTP dephosphorylation I Bcen_6264 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Bcen_6264 PWY-7176 UTP and CTP de novo biosynthesis Bcen_6264 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Bcen_6264 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Bcen_6264 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Bcen_6264 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Bcen_6264 PWY-7205 CMP phosphorylation Bcen_6264 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Bcen_6264 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Bcen_6264 PWY-7221 guanosine ribonucleotides de novo biosynthesis Bcen_6264 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Bcen_6264 PWY-7224 purine deoxyribonucleosides salvage Bcen_6264 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Bcen_6264 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Bcen_6267 PWY-7560 methylerythritol phosphate pathway II Bcen_6278 PWY-7219 adenosine ribonucleotides de novo biosynthesis Bcen_6290 PWY-5676 acetyl-CoA fermentation to butanoate II Bcen_6290 PWY-5741 ethylmalonyl-CoA pathway Bcen_6290 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Bcen_6300 PWY-6936 seleno-amino acid biosynthesis Bcen_6322 PWY-723 alkylnitronates degradation Bcen_6357 PWY-7545 pyruvate to cytochrome bd terminal oxidase electron transfer Bcen_6387 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Bcen_6387 PWY-5723 Rubisco shunt Bcen_6387 PWY-6891 thiazole biosynthesis II (Bacillus) Bcen_6387 PWY-6892 thiazole biosynthesis I (E. coli) Bcen_6387 PWY-6901 superpathway of glucose and xylose degradation Bcen_6387 PWY-7560 methylerythritol phosphate pathway II Bcen_6396 PWY-5101 L-isoleucine biosynthesis II Bcen_6396 PWY-5103 L-isoleucine biosynthesis III Bcen_6396 PWY-5104 L-isoleucine biosynthesis IV Bcen_6396 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bcen_6403 PWY-6713 L-rhamnose degradation II Bcen_6403 PWY-6714 L-rhamnose degradation III Bcen_6407 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bcen_6407 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bcen_6417 PWY-3221 dTDP-L-rhamnose biosynthesis II Bcen_6417 PWY-6808 dTDP-D-forosamine biosynthesis Bcen_6417 PWY-6942 dTDP-D-desosamine biosynthesis Bcen_6417 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Bcen_6417 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Bcen_6417 PWY-6974 dTDP-L-olivose biosynthesis Bcen_6417 PWY-6976 dTDP-L-mycarose biosynthesis Bcen_6417 PWY-7104 dTDP-L-megosamine biosynthesis Bcen_6417 PWY-7301 dTDP-β-L-noviose biosynthesis Bcen_6417 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Bcen_6417 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Bcen_6417 PWY-7316 dTDP-N-acetylviosamine biosynthesis Bcen_6417 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Bcen_6417 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Bcen_6417 PWY-7414 dTDP-α-D-mycaminose biosynthesis Bcen_6417 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Bcen_6423 PWY-6891 thiazole biosynthesis II (Bacillus) Bcen_6423 PWY-6892 thiazole biosynthesis I (E. coli) Bcen_6423 PWY-7560 methylerythritol phosphate pathway II Bcen_6438 PWY-5692 allantoin degradation to glyoxylate II Bcen_6438 PWY-5698 allantoin degradation to ureidoglycolate II (ammonia producing) Bcen_6447 PWY-7425 2-chloroacrylate degradation I Bcen_6461 PWY-5101 L-isoleucine biosynthesis II Bcen_6461 PWY-5103 L-isoleucine biosynthesis III Bcen_6461 PWY-5104 L-isoleucine biosynthesis IV Bcen_6461 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bcen_6487 PWY-6690 cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate Bcen_6501 PWY-6986 alginate degradation Bcen_6505 PWY-4261 glycerol degradation I Bcen_6508 PWY-2723 trehalose degradation V Bcen_6508 PWY-6317 galactose degradation I (Leloir pathway) Bcen_6508 PWY-6737 starch degradation V