BUPH_01665	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_01665	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
BUPH_01665	PWY-6638	sulfolactate degradation III
BUPH_01665	PWY-6642	(<i>R</i>)-cysteate degradation
BUPH_01665	PWY-6643	coenzyme M biosynthesis II
BUPH_01665	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BUPH_01665	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BUPH_01665	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BUPH_01680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_01680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_01682	PWY-5392	reductive TCA cycle II
BUPH_01682	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BUPH_01682	PWY-5690	TCA cycle II (plants and fungi)
BUPH_01682	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_01682	PWY-6728	methylaspartate cycle
BUPH_01682	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_01682	PWY-7254	TCA cycle VII (acetate-producers)
BUPH_01682	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BUPH_01685	PWY-6672	<i>cis</i>-genanyl-CoA degradation
BUPH_01685	PWY-7118	chitin degradation to ethanol
BUPH_01702	PWY-2941	L-lysine biosynthesis II
BUPH_01702	PWY-2942	L-lysine biosynthesis III
BUPH_01702	PWY-5097	L-lysine biosynthesis VI
BUPH_01711	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
BUPH_01711	PWY-581	indole-3-acetate biosynthesis II
BUPH_01711	PWY-7308	acrylonitrile degradation I
BUPH_01743	PWY-6902	chitin degradation II
BUPH_01769	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BUPH_01769	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BUPH_01780	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
BUPH_01795	PWY-5028	L-histidine degradation II
BUPH_01795	PWY-5030	L-histidine degradation III
BUPH_01797	PWY-5028	L-histidine degradation II
BUPH_01797	PWY-5030	L-histidine degradation III
BUPH_01799	PWY-5028	L-histidine degradation II
BUPH_01799	PWY-5030	L-histidine degradation III
BUPH_01807	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BUPH_01807	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BUPH_01808	PWY-622	starch biosynthesis
BUPH_01809	PWY-622	starch biosynthesis
BUPH_01813	PWY-5350	thiosulfate disproportionation III (rhodanese)
BUPH_01844	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BUPH_01854	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BUPH_01854	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BUPH_01859	PWY-5033	nicotinate degradation II
BUPH_01859	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_01859	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_01859	PWY-6993	nicotine degradation II (pyrrolidine pathway)
BUPH_01859	PWY-722	nicotinate degradation I
BUPH_01873	PWY-5331	taurine biosynthesis
BUPH_01906	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BUPH_01907	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BUPH_01908	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BUPH_01908	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BUPH_01934	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_01934	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_01968	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_01968	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_01970	PWY-5691	urate degradation to allantoin I
BUPH_01970	PWY-7394	urate degradation to allantoin II
BUPH_01971	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
BUPH_01972	PWY-5694	allantoin degradation to glyoxylate I
BUPH_01972	PWY-5705	allantoin degradation to glyoxylate III
BUPH_01974	PWY-5691	urate degradation to allantoin I
BUPH_01974	PWY-7394	urate degradation to allantoin II
BUPH_01985	PWY-723	alkylnitronates degradation
BUPH_01988	PWY-6803	phosphatidylcholine acyl editing
BUPH_01988	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
BUPH_01988	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
BUPH_01988	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
BUPH_02050	PWY-101	photosynthesis light reactions
BUPH_02050	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
BUPH_02068	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BUPH_02069	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BUPH_02073	PWY-5129	sphingolipid biosynthesis (plants)
BUPH_02078	PWY-5129	sphingolipid biosynthesis (plants)
BUPH_02084	PWY-6832	2-aminoethylphosphonate degradation II
BUPH_02089	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
BUPH_02127	PWY-381	nitrate reduction II (assimilatory)
BUPH_02127	PWY-5675	nitrate reduction V (assimilatory)
BUPH_02127	PWY-6549	L-glutamine biosynthesis III
BUPH_02127	PWY-6963	ammonia assimilation cycle I
BUPH_02127	PWY-6964	ammonia assimilation cycle II
BUPH_02147	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BUPH_02147	PWY-7494	choline degradation IV
BUPH_02153	PWY-5194	siroheme biosynthesis
BUPH_02153	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BUPH_02156	PWY-6728	methylaspartate cycle
BUPH_02156	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_02156	PWY-7118	chitin degradation to ethanol
BUPH_02156	PWY-7294	xylose degradation IV
BUPH_02156	PWY-7295	L-arabinose degradation IV
BUPH_02157	PWY-3801	sucrose degradation II (sucrose synthase)
BUPH_02157	PWY-6527	stachyose degradation
BUPH_02157	PWY-6981	chitin biosynthesis
BUPH_02157	PWY-7238	sucrose biosynthesis II
BUPH_02157	PWY-7343	UDP-glucose biosynthesis
BUPH_02165	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
BUPH_02165	PWY-5739	GDP-D-perosamine biosynthesis
BUPH_02165	PWY-5740	GDP-L-colitose biosynthesis
BUPH_02165	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
BUPH_02174	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
BUPH_02175	PWY-6655	xanthan biosynthesis
BUPH_02175	PWY-6658	acetan biosynthesis
BUPH_02176	PWY-5659	GDP-mannose biosynthesis
BUPH_02176	PWY-6073	alginate biosynthesis I (algal)
BUPH_02176	PWY-6082	alginate biosynthesis II (bacterial)
BUPH_02176	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
BUPH_02191	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BUPH_02191	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_02191	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_02191	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BUPH_02191	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BUPH_02191	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BUPH_02203	PWY-1361	benzoyl-CoA degradation I (aerobic)
BUPH_02203	PWY-5109	2-methylbutanoate biosynthesis
BUPH_02203	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BUPH_02203	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BUPH_02203	PWY-5177	glutaryl-CoA degradation
BUPH_02203	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BUPH_02203	PWY-6435	4-hydroxybenzoate biosynthesis V
BUPH_02203	PWY-6583	pyruvate fermentation to butanol I
BUPH_02203	PWY-6863	pyruvate fermentation to hexanol
BUPH_02203	PWY-6883	pyruvate fermentation to butanol II
BUPH_02203	PWY-6944	androstenedione degradation
BUPH_02203	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BUPH_02203	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BUPH_02203	PWY-7007	methyl ketone biosynthesis
BUPH_02203	PWY-7046	4-coumarate degradation (anaerobic)
BUPH_02203	PWY-7094	fatty acid salvage
BUPH_02203	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BUPH_02203	PWY-735	jasmonic acid biosynthesis
BUPH_02203	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BUPH_02210	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BUPH_02210	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BUPH_02210	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BUPH_02212	PWY-6938	NADH repair
BUPH_02213	PWY-3801	sucrose degradation II (sucrose synthase)
BUPH_02213	PWY-5054	sorbitol biosynthesis I
BUPH_02213	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
BUPH_02213	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BUPH_02213	PWY-5659	GDP-mannose biosynthesis
BUPH_02213	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_02213	PWY-621	sucrose degradation III (sucrose invertase)
BUPH_02213	PWY-622	starch biosynthesis
BUPH_02213	PWY-6531	mannitol cycle
BUPH_02213	PWY-6981	chitin biosynthesis
BUPH_02213	PWY-7238	sucrose biosynthesis II
BUPH_02213	PWY-7347	sucrose biosynthesis III
BUPH_02213	PWY-7385	1,3-propanediol biosynthesis (engineered)
BUPH_02235	PWY-7560	methylerythritol phosphate pathway II
BUPH_02236	PWY-7560	methylerythritol phosphate pathway II
BUPH_02238	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_02256	PWY-6936	seleno-amino acid biosynthesis
BUPH_02262	PWY-5676	acetyl-CoA fermentation to butanoate II
BUPH_02262	PWY-5741	ethylmalonyl-CoA pathway
BUPH_02262	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BUPH_02272	PWY-5381	pyridine nucleotide cycling (plants)
BUPH_02272	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BUPH_02272	PWY-6596	adenosine nucleotides degradation I
BUPH_02272	PWY-6606	guanosine nucleotides degradation II
BUPH_02272	PWY-6607	guanosine nucleotides degradation I
BUPH_02272	PWY-6608	guanosine nucleotides degradation III
BUPH_02272	PWY-7185	UTP and CTP dephosphorylation I
BUPH_02284	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_02298	PWY-6823	molybdenum cofactor biosynthesis
BUPH_02300	PWY-6823	molybdenum cofactor biosynthesis
BUPH_02374	PWY-5686	UMP biosynthesis
BUPH_02396	PWY-6655	xanthan biosynthesis
BUPH_02396	PWY-6658	acetan biosynthesis
BUPH_02403	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BUPH_02403	PWY-5723	Rubisco shunt
BUPH_02538	PWY-1042	glycolysis IV (plant cytosol)
BUPH_02538	PWY-1622	formaldehyde assimilation I (serine pathway)
BUPH_02538	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BUPH_02538	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_02538	PWY-5723	Rubisco shunt
BUPH_02538	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_02538	PWY-6886	1-butanol autotrophic biosynthesis
BUPH_02538	PWY-6901	superpathway of glucose and xylose degradation
BUPH_02538	PWY-7003	glycerol degradation to butanol
BUPH_02538	PWY-7124	ethylene biosynthesis V (engineered)
BUPH_02538	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BUPH_02540	PWY-4261	glycerol degradation I
BUPH_02584	PWY-6683	sulfate reduction III (assimilatory)
BUPH_02659	PWY-6610	adenine and adenosine salvage IV
BUPH_02663	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BUPH_02664	PWY-5392	reductive TCA cycle II
BUPH_02664	PWY-5537	pyruvate fermentation to acetate V
BUPH_02664	PWY-5538	pyruvate fermentation to acetate VI
BUPH_02664	PWY-5690	TCA cycle II (plants and fungi)
BUPH_02664	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_02664	PWY-6728	methylaspartate cycle
BUPH_02664	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_02664	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BUPH_02671	PWY-6610	adenine and adenosine salvage IV
BUPH_02681	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BUPH_02681	PWY-7494	choline degradation IV
BUPH_02708	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_02710	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BUPH_02710	PWY-6596	adenosine nucleotides degradation I
BUPH_02710	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_02717	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_02723	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BUPH_02723	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BUPH_02723	PWY-5989	stearate biosynthesis II (bacteria and plants)
BUPH_02723	PWY-5994	palmitate biosynthesis I (animals and fungi)
BUPH_02723	PWY-6113	superpathway of mycolate biosynthesis
BUPH_02723	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BUPH_02723	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BUPH_02723	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BUPH_02723	PWYG-321	mycolate biosynthesis
BUPH_02728	PWY-7560	methylerythritol phosphate pathway II
BUPH_02757	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BUPH_02759	PWY-6910	hydroxymethylpyrimidine salvage
BUPH_02759	PWY-7356	thiamin salvage IV (yeast)
BUPH_02759	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BUPH_02767	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_02771	PWY-6728	methylaspartate cycle
BUPH_02771	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_02771	PWY-7118	chitin degradation to ethanol
BUPH_02771	PWY-7294	xylose degradation IV
BUPH_02771	PWY-7295	L-arabinose degradation IV
BUPH_02775	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BUPH_02793	PWY-2941	L-lysine biosynthesis II
BUPH_02793	PWY-2942	L-lysine biosynthesis III
BUPH_02793	PWY-5097	L-lysine biosynthesis VI
BUPH_02793	PWY-6559	spermidine biosynthesis II
BUPH_02793	PWY-6562	norspermidine biosynthesis
BUPH_02793	PWY-7153	grixazone biosynthesis
BUPH_02795	PWY-4381	fatty acid biosynthesis initiation I
BUPH_02795	PWY-5743	3-hydroxypropanoate cycle
BUPH_02795	PWY-5744	glyoxylate assimilation
BUPH_02795	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BUPH_02795	PWY-6679	jadomycin biosynthesis
BUPH_02795	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BUPH_02803	PWY-6936	seleno-amino acid biosynthesis
BUPH_02803	PWY-7274	D-cycloserine biosynthesis
BUPH_02805	PWY-2301	<i>myo</i>-inositol biosynthesis
BUPH_02805	PWY-4702	phytate degradation I
BUPH_02805	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
BUPH_02818	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_02828	PWY-7560	methylerythritol phosphate pathway II
BUPH_02831	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BUPH_02831	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BUPH_02831	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_02831	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_02831	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BUPH_02831	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BUPH_02831	PWY-7205	CMP phosphorylation
BUPH_02831	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BUPH_02831	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_02831	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_02831	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_02831	PWY-7224	purine deoxyribonucleosides salvage
BUPH_02831	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_02831	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BUPH_02835	PWY-2941	L-lysine biosynthesis II
BUPH_02835	PWY-2942	L-lysine biosynthesis III
BUPH_02835	PWY-5097	L-lysine biosynthesis VI
BUPH_02848	PWY-1042	glycolysis IV (plant cytosol)
BUPH_02848	PWY-1622	formaldehyde assimilation I (serine pathway)
BUPH_02848	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BUPH_02848	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_02848	PWY-5723	Rubisco shunt
BUPH_02848	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_02848	PWY-6886	1-butanol autotrophic biosynthesis
BUPH_02848	PWY-6901	superpathway of glucose and xylose degradation
BUPH_02848	PWY-7003	glycerol degradation to butanol
BUPH_02848	PWY-7124	ethylene biosynthesis V (engineered)
BUPH_02848	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BUPH_02849	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BUPH_02849	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BUPH_02850	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BUPH_02850	PWY-7177	UTP and CTP dephosphorylation II
BUPH_02850	PWY-7185	UTP and CTP dephosphorylation I
BUPH_02867	PWY-6823	molybdenum cofactor biosynthesis
BUPH_02867	PWY-6891	thiazole biosynthesis II (Bacillus)
BUPH_02867	PWY-6892	thiazole biosynthesis I (E. coli)
BUPH_02867	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BUPH_02878	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BUPH_02878	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BUPH_02880	PWY-6891	thiazole biosynthesis II (Bacillus)
BUPH_02880	PWY-6892	thiazole biosynthesis I (E. coli)
BUPH_02880	PWY-7560	methylerythritol phosphate pathway II
BUPH_02884	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
BUPH_02884	PWY-2201	folate transformations I
BUPH_02884	PWY-3841	folate transformations II
BUPH_02884	PWY-5030	L-histidine degradation III
BUPH_02884	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_02884	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BUPH_02888	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_02888	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_02896	PWY-381	nitrate reduction II (assimilatory)
BUPH_02896	PWY-5675	nitrate reduction V (assimilatory)
BUPH_02896	PWY-6549	L-glutamine biosynthesis III
BUPH_02896	PWY-6963	ammonia assimilation cycle I
BUPH_02896	PWY-6964	ammonia assimilation cycle II
BUPH_02904	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_02944	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
BUPH_02955	PWY-6871	3-methylbutanol biosynthesis
BUPH_02959	PWY-3982	uracil degradation I (reductive)
BUPH_02959	PWY-6430	thymine degradation
BUPH_02965	PWY-101	photosynthesis light reactions
BUPH_02965	PWY-1361	benzoyl-CoA degradation I (aerobic)
BUPH_02965	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
BUPH_02966	PWY-1361	benzoyl-CoA degradation I (aerobic)
BUPH_02967	PWY-1361	benzoyl-CoA degradation I (aerobic)
BUPH_02968	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BUPH_02979	PWY-1361	benzoyl-CoA degradation I (aerobic)
BUPH_02979	PWY-5109	2-methylbutanoate biosynthesis
BUPH_02979	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BUPH_02979	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BUPH_02979	PWY-5177	glutaryl-CoA degradation
BUPH_02979	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BUPH_02979	PWY-6435	4-hydroxybenzoate biosynthesis V
BUPH_02979	PWY-6583	pyruvate fermentation to butanol I
BUPH_02979	PWY-6863	pyruvate fermentation to hexanol
BUPH_02979	PWY-6883	pyruvate fermentation to butanol II
BUPH_02979	PWY-6944	androstenedione degradation
BUPH_02979	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BUPH_02979	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BUPH_02979	PWY-7007	methyl ketone biosynthesis
BUPH_02979	PWY-7046	4-coumarate degradation (anaerobic)
BUPH_02979	PWY-7094	fatty acid salvage
BUPH_02979	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BUPH_02979	PWY-735	jasmonic acid biosynthesis
BUPH_02979	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BUPH_03001	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BUPH_03004	PWY-5344	L-homocysteine biosynthesis
BUPH_03004	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
BUPH_03008	PWY-6785	hydrogen production VIII
BUPH_03010	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_03010	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_03019	PWY-3941	&beta;-alanine biosynthesis II
BUPH_03019	PWY-5104	L-isoleucine biosynthesis IV
BUPH_03019	PWY-5747	2-methylcitrate cycle II
BUPH_03020	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BUPH_03020	PWY-6153	autoinducer AI-2 biosynthesis I
BUPH_03020	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
BUPH_03023	PWY-3801	sucrose degradation II (sucrose synthase)
BUPH_03023	PWY-6527	stachyose degradation
BUPH_03023	PWY-6981	chitin biosynthesis
BUPH_03023	PWY-7238	sucrose biosynthesis II
BUPH_03023	PWY-7343	UDP-glucose biosynthesis
BUPH_03034	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BUPH_03049	PWY-4041	&gamma;-glutamyl cycle
BUPH_03049	PWY-5826	hypoglycin biosynthesis
BUPH_03050	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BUPH_03074	PWY-6749	CMP-legionaminate biosynthesis I
BUPH_03075	PWY-6614	tetrahydrofolate biosynthesis
BUPH_03081	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_03081	PWY-5686	UMP biosynthesis
BUPH_03081	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BUPH_03082	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_03082	PWY-5686	UMP biosynthesis
BUPH_03082	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BUPH_03084	PWY-5386	methylglyoxal degradation I
BUPH_03100	PWY-5269	cardiolipin biosynthesis II
BUPH_03100	PWY-5668	cardiolipin biosynthesis I
BUPH_03105	PWY-6902	chitin degradation II
BUPH_03106	PWY-6012	acyl carrier protein metabolism I
BUPH_03106	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BUPH_03121	PWY-5367	petroselinate biosynthesis
BUPH_03121	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BUPH_03121	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BUPH_03121	PWY-5989	stearate biosynthesis II (bacteria and plants)
BUPH_03121	PWY-5994	palmitate biosynthesis I (animals and fungi)
BUPH_03121	PWY-6113	superpathway of mycolate biosynthesis
BUPH_03121	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BUPH_03121	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BUPH_03121	PWY-6951	BUPH_03121
BUPH_03121	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
BUPH_03121	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BUPH_03121	PWYG-321	mycolate biosynthesis
BUPH_03122	PWY-4381	fatty acid biosynthesis initiation I
BUPH_03122	PWY-6799	fatty acid biosynthesis (plant mitochondria)
BUPH_03122	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BUPH_03123	PWY-4381	fatty acid biosynthesis initiation I
BUPH_03133	PWY-6823	molybdenum cofactor biosynthesis
BUPH_03134	PWY-5964	guanylyl molybdenum cofactor biosynthesis
BUPH_03135	PWY-6823	molybdenum cofactor biosynthesis
BUPH_03141	PWY-5381	pyridine nucleotide cycling (plants)
BUPH_03156	PWY-5392	reductive TCA cycle II
BUPH_03156	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BUPH_03156	PWY-5690	TCA cycle II (plants and fungi)
BUPH_03156	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_03156	PWY-6728	methylaspartate cycle
BUPH_03156	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_03156	PWY-7254	TCA cycle VII (acetate-producers)
BUPH_03156	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BUPH_03163	PWY-3841	folate transformations II
BUPH_03163	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_03163	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_03163	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BUPH_03163	PWY-7199	pyrimidine deoxyribonucleosides salvage
BUPH_03163	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BUPH_03166	PWY-3841	folate transformations II
BUPH_03166	PWY-6614	tetrahydrofolate biosynthesis
BUPH_03177	PWY-6829	tRNA methylation (yeast)
BUPH_03177	PWY-7285	methylwyosine biosynthesis
BUPH_03177	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
BUPH_03196	PWY-6936	seleno-amino acid biosynthesis
BUPH_03200	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
BUPH_03205	PWY-7205	CMP phosphorylation
BUPH_03206	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BUPH_03209	PWY-3461	L-tyrosine biosynthesis II
BUPH_03209	PWY-3462	L-phenylalanine biosynthesis II
BUPH_03209	PWY-6120	L-tyrosine biosynthesis III
BUPH_03209	PWY-6627	salinosporamide A biosynthesis
BUPH_03209	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
BUPH_03214	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
BUPH_03214	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
BUPH_03214	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
BUPH_03214	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
BUPH_03214	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
BUPH_03214	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
BUPH_03214	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
BUPH_03214	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
BUPH_03214	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
BUPH_03214	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
BUPH_03215	PWY-181	photorespiration
BUPH_03225	PWY-1881	formate oxidation to CO<sub>2</sub>
BUPH_03225	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_03225	PWY-6696	oxalate degradation III
BUPH_03240	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BUPH_03242	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_03242	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BUPH_03242	PWY-6538	caffeine degradation III (bacteria, via demethylation)
BUPH_03242	PWY-6596	adenosine nucleotides degradation I
BUPH_03242	PWY-6606	guanosine nucleotides degradation II
BUPH_03242	PWY-6607	guanosine nucleotides degradation I
BUPH_03242	PWY-6608	guanosine nucleotides degradation III
BUPH_03242	PWY-6999	theophylline degradation
BUPH_03243	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_03243	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BUPH_03243	PWY-6538	caffeine degradation III (bacteria, via demethylation)
BUPH_03243	PWY-6596	adenosine nucleotides degradation I
BUPH_03243	PWY-6606	guanosine nucleotides degradation II
BUPH_03243	PWY-6607	guanosine nucleotides degradation I
BUPH_03243	PWY-6608	guanosine nucleotides degradation III
BUPH_03243	PWY-6999	theophylline degradation
BUPH_03245	PWY-6610	adenine and adenosine salvage IV
BUPH_03246	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_03246	PWY-6606	guanosine nucleotides degradation II
BUPH_03246	PWY-6608	guanosine nucleotides degradation III
BUPH_03246	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BUPH_03248	PWY-5839	menaquinol-7 biosynthesis
BUPH_03248	PWY-5844	menaquinol-9 biosynthesis
BUPH_03248	PWY-5849	menaquinol-6 biosynthesis
BUPH_03248	PWY-5890	menaquinol-10 biosynthesis
BUPH_03248	PWY-5891	menaquinol-11 biosynthesis
BUPH_03248	PWY-5892	menaquinol-12 biosynthesis
BUPH_03248	PWY-5895	menaquinol-13 biosynthesis
BUPH_03253	PWY-5367	petroselinate biosynthesis
BUPH_03253	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BUPH_03253	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BUPH_03253	PWY-5989	stearate biosynthesis II (bacteria and plants)
BUPH_03253	PWY-5994	palmitate biosynthesis I (animals and fungi)
BUPH_03253	PWY-6113	superpathway of mycolate biosynthesis
BUPH_03253	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BUPH_03253	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BUPH_03253	PWY-6951	BUPH_03253
BUPH_03253	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
BUPH_03253	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BUPH_03253	PWYG-321	mycolate biosynthesis
BUPH_03254	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BUPH_03254	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BUPH_03254	PWY-5989	stearate biosynthesis II (bacteria and plants)
BUPH_03254	PWY-5994	palmitate biosynthesis I (animals and fungi)
BUPH_03254	PWY-6113	superpathway of mycolate biosynthesis
BUPH_03254	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BUPH_03254	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BUPH_03254	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BUPH_03254	PWYG-321	mycolate biosynthesis
BUPH_03261	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BUPH_03261	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BUPH_03261	PWY-5989	stearate biosynthesis II (bacteria and plants)
BUPH_03261	PWY-5994	palmitate biosynthesis I (animals and fungi)
BUPH_03261	PWY-6113	superpathway of mycolate biosynthesis
BUPH_03261	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BUPH_03261	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BUPH_03261	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BUPH_03261	PWYG-321	mycolate biosynthesis
BUPH_03272	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_03274	PWY-3461	L-tyrosine biosynthesis II
BUPH_03274	PWY-3462	L-phenylalanine biosynthesis II
BUPH_03274	PWY-6120	L-tyrosine biosynthesis III
BUPH_03274	PWY-6627	salinosporamide A biosynthesis
BUPH_03281	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_03284	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
BUPH_03289	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BUPH_03291	PWY-6167	flavin biosynthesis II (archaea)
BUPH_03291	PWY-6168	flavin biosynthesis III (fungi)
BUPH_03291	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_03292	PWY-6167	flavin biosynthesis II (archaea)
BUPH_03292	PWY-6168	flavin biosynthesis III (fungi)
BUPH_03292	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BUPH_03293	PWY-6167	flavin biosynthesis II (archaea)
BUPH_03293	PWY-6168	flavin biosynthesis III (fungi)
BUPH_03313	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_03330	PWY-7560	methylerythritol phosphate pathway II
BUPH_03334	PWY-5316	nicotine biosynthesis
BUPH_03334	PWY-7342	superpathway of nicotine biosynthesis
BUPH_03335	PWY-5316	nicotine biosynthesis
BUPH_03335	PWY-5381	pyridine nucleotide cycling (plants)
BUPH_03335	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BUPH_03335	PWY-7342	superpathway of nicotine biosynthesis
BUPH_03336	PWY-5316	nicotine biosynthesis
BUPH_03336	PWY-7342	superpathway of nicotine biosynthesis
BUPH_03340	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BUPH_03340	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BUPH_03341	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
BUPH_03341	PWY-6167	flavin biosynthesis II (archaea)
BUPH_03341	PWY-6168	flavin biosynthesis III (fungi)
BUPH_03346	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BUPH_03346	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_03346	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_03346	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
BUPH_03350	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_03350	PWY-6549	L-glutamine biosynthesis III
BUPH_03350	PWY-6728	methylaspartate cycle
BUPH_03350	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_03350	PWY-7124	ethylene biosynthesis V (engineered)
BUPH_03350	PWY-7254	TCA cycle VII (acetate-producers)
BUPH_03350	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BUPH_03373	PWY-6854	ethylene biosynthesis III (microbes)
BUPH_03376	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BUPH_03376	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BUPH_03377	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_03383	PWY-4981	L-proline biosynthesis II (from arginine)
BUPH_03383	PWY-4984	urea cycle
BUPH_03383	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BUPH_03384	PWY-4983	L-citrulline-nitric oxide cycle
BUPH_03384	PWY-4984	urea cycle
BUPH_03384	PWY-5	canavanine biosynthesis
BUPH_03384	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_03384	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BUPH_03385	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_03385	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_03399	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BUPH_03399	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BUPH_03405	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BUPH_03405	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BUPH_03406	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BUPH_03406	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BUPH_03409	PWY-4261	glycerol degradation I
BUPH_03416	PWY-4261	glycerol degradation I
BUPH_03427	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BUPH_03428	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BUPH_03428	PWY-3162	L-tryptophan degradation V (side chain pathway)
BUPH_03428	PWY-5057	L-valine degradation II
BUPH_03428	PWY-5076	L-leucine degradation III
BUPH_03428	PWY-5078	L-isoleucine degradation II
BUPH_03428	PWY-5079	L-phenylalanine degradation III
BUPH_03428	PWY-5082	L-methionine degradation III
BUPH_03428	PWY-5480	pyruvate fermentation to ethanol I
BUPH_03428	PWY-5486	pyruvate fermentation to ethanol II
BUPH_03428	PWY-5751	phenylethanol biosynthesis
BUPH_03428	PWY-6028	acetoin degradation
BUPH_03428	PWY-6313	serotonin degradation
BUPH_03428	PWY-6333	acetaldehyde biosynthesis I
BUPH_03428	PWY-6342	noradrenaline and adrenaline degradation
BUPH_03428	PWY-6587	pyruvate fermentation to ethanol III
BUPH_03428	PWY-6802	salidroside biosynthesis
BUPH_03428	PWY-6871	3-methylbutanol biosynthesis
BUPH_03428	PWY-7013	L-1,2-propanediol degradation
BUPH_03428	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BUPH_03428	PWY-7118	chitin degradation to ethanol
BUPH_03428	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BUPH_03428	PWY-7557	dehydrodiconiferyl alcohol degradation
BUPH_03429	PWY-4261	glycerol degradation I
BUPH_03443	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BUPH_03443	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BUPH_03448	PWY-6123	inosine-5'-phosphate biosynthesis I
BUPH_03448	PWY-7234	inosine-5'-phosphate biosynthesis III
BUPH_03449	PWY-6123	inosine-5'-phosphate biosynthesis I
BUPH_03449	PWY-6124	inosine-5'-phosphate biosynthesis II
BUPH_03449	PWY-7234	inosine-5'-phosphate biosynthesis III
BUPH_03450	PWY-1042	glycolysis IV (plant cytosol)
BUPH_03450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BUPH_03450	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_03450	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_03450	PWY-7385	1,3-propanediol biosynthesis (engineered)
BUPH_03452	PWY-1042	glycolysis IV (plant cytosol)
BUPH_03452	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BUPH_03452	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_03452	PWY-5723	Rubisco shunt
BUPH_03452	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_03452	PWY-6886	1-butanol autotrophic biosynthesis
BUPH_03452	PWY-6901	superpathway of glucose and xylose degradation
BUPH_03452	PWY-7003	glycerol degradation to butanol
BUPH_03452	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BUPH_03452	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BUPH_03453	PWY-1042	glycolysis IV (plant cytosol)
BUPH_03453	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_03453	PWY-6886	1-butanol autotrophic biosynthesis
BUPH_03453	PWY-6901	superpathway of glucose and xylose degradation
BUPH_03453	PWY-7003	glycerol degradation to butanol
BUPH_03456	PWY-5057	L-valine degradation II
BUPH_03456	PWY-5076	L-leucine degradation III
BUPH_03456	PWY-5078	L-isoleucine degradation II
BUPH_03456	PWY-5101	L-isoleucine biosynthesis II
BUPH_03456	PWY-5103	L-isoleucine biosynthesis III
BUPH_03456	PWY-5104	L-isoleucine biosynthesis IV
BUPH_03456	PWY-5108	L-isoleucine biosynthesis V
BUPH_03466	PWY-5392	reductive TCA cycle II
BUPH_03466	PWY-5537	pyruvate fermentation to acetate V
BUPH_03466	PWY-5538	pyruvate fermentation to acetate VI
BUPH_03466	PWY-5690	TCA cycle II (plants and fungi)
BUPH_03466	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_03466	PWY-6728	methylaspartate cycle
BUPH_03466	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_03466	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BUPH_03467	PWY-5392	reductive TCA cycle II
BUPH_03467	PWY-5537	pyruvate fermentation to acetate V
BUPH_03467	PWY-5538	pyruvate fermentation to acetate VI
BUPH_03467	PWY-5690	TCA cycle II (plants and fungi)
BUPH_03467	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_03467	PWY-6728	methylaspartate cycle
BUPH_03467	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BUPH_03467	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BUPH_03488	PWY-4041	&gamma;-glutamyl cycle
BUPH_03488	PWY-5826	hypoglycin biosynthesis
BUPH_03492	PWY-4261	glycerol degradation I
BUPH_03492	PWY-6118	glycerol-3-phosphate shuttle
BUPH_03492	PWY-6952	glycerophosphodiester degradation
BUPH_03493	PWY-4261	glycerol degradation I
BUPH_03496	PWY-6167	flavin biosynthesis II (archaea)
BUPH_03496	PWY-6168	flavin biosynthesis III (fungi)
BUPH_03513	PWY-6123	inosine-5'-phosphate biosynthesis I
BUPH_03513	PWY-6124	inosine-5'-phosphate biosynthesis II
BUPH_03513	PWY-7234	inosine-5'-phosphate biosynthesis III
BUPH_03528	PWY-5686	UMP biosynthesis
BUPH_03537	PWY-6123	inosine-5'-phosphate biosynthesis I
BUPH_03537	PWY-6124	inosine-5'-phosphate biosynthesis II
BUPH_03537	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_03537	PWY-7234	inosine-5'-phosphate biosynthesis III
BUPH_03538	PWY-5530	sorbitol biosynthesis II
BUPH_03538	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BUPH_03540	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BUPH_03540	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BUPH_03540	PWY-7242	D-fructuronate degradation
BUPH_03540	PWY-7310	D-glucosaminate degradation
BUPH_03541	PWY-5101	L-isoleucine biosynthesis II
BUPH_03541	PWY-5103	L-isoleucine biosynthesis III
BUPH_03541	PWY-5104	L-isoleucine biosynthesis IV
BUPH_03541	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BUPH_03555	PWY-2941	L-lysine biosynthesis II
BUPH_03555	PWY-2942	L-lysine biosynthesis III
BUPH_03555	PWY-5097	L-lysine biosynthesis VI
BUPH_03558	PWY-5694	allantoin degradation to glyoxylate I
BUPH_03558	PWY-5705	allantoin degradation to glyoxylate III
BUPH_03559	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
BUPH_03562	PWY-1042	glycolysis IV (plant cytosol)
BUPH_03562	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_03562	PWY-6901	superpathway of glucose and xylose degradation
BUPH_03562	PWY-7003	glycerol degradation to butanol
BUPH_03563	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BUPH_03563	PWY-5723	Rubisco shunt
BUPH_03563	PWY-6891	thiazole biosynthesis II (Bacillus)
BUPH_03563	PWY-6892	thiazole biosynthesis I (E. coli)
BUPH_03563	PWY-6901	superpathway of glucose and xylose degradation
BUPH_03563	PWY-7560	methylerythritol phosphate pathway II
BUPH_03569	PWY-1281	sulfoacetaldehyde degradation I
BUPH_03569	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BUPH_03569	PWY-5482	pyruvate fermentation to acetate II
BUPH_03569	PWY-5485	pyruvate fermentation to acetate IV
BUPH_03569	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_03569	PWY-6637	sulfolactate degradation II
BUPH_03569	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BUPH_03570	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BUPH_03570	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BUPH_03570	PWY-6896	thiamin salvage I
BUPH_03570	PWY-6897	thiamin salvage II
BUPH_03571	PWY-5269	cardiolipin biosynthesis II
BUPH_03571	PWY-5668	cardiolipin biosynthesis I
BUPH_03574	PWY-5686	UMP biosynthesis
BUPH_03582	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BUPH_03582	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BUPH_03582	PWY-7242	D-fructuronate degradation
BUPH_03582	PWY-7310	D-glucosaminate degradation
BUPH_03584	PWY-7130	L-glucose degradation
BUPH_03586	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BUPH_03592	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BUPH_03592	PWY-6416	quinate degradation II
BUPH_03592	PWY-6707	gallate biosynthesis
BUPH_03602	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BUPH_03602	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_03602	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BUPH_03602	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BUPH_03602	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_03602	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_03602	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_03602	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BUPH_03604	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BUPH_03604	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_03604	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BUPH_03604	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BUPH_03604	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_03604	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_03604	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BUPH_03604	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BUPH_03627	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_03635	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_03635	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_03636	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_03636	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_03637	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BUPH_03637	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BUPH_03637	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BUPH_03637	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BUPH_03639	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_03639	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_03640	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BUPH_03640	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BUPH_03640	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BUPH_03641	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_03641	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_03666	PWY-1281	sulfoacetaldehyde degradation I
BUPH_03666	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BUPH_03666	PWY-5482	pyruvate fermentation to acetate II
BUPH_03666	PWY-5485	pyruvate fermentation to acetate IV
BUPH_03666	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_03666	PWY-6637	sulfolactate degradation II
BUPH_03666	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BUPH_03668	PWY-5686	UMP biosynthesis
BUPH_03671	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_03671	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BUPH_03685	PWY-6749	CMP-legionaminate biosynthesis I
BUPH_03686	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BUPH_03688	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BUPH_03688	PWY-6148	tetrahydromethanopterin biosynthesis
BUPH_03688	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BUPH_03688	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BUPH_03710	PWY-2201	folate transformations I
BUPH_03710	PWY-3841	folate transformations II
BUPH_03712	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BUPH_03715	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BUPH_03715	PWY-7494	choline degradation IV
BUPH_03727	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_03789	PWY-4381	fatty acid biosynthesis initiation I
BUPH_03791	PWY-4381	fatty acid biosynthesis initiation I
BUPH_03827	PWY-6986	alginate degradation
BUPH_03831	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
BUPH_03831	PWY-6853	ethylene biosynthesis II (microbes)
BUPH_03831	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BUPH_03833	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
BUPH_03833	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BUPH_03837	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_03839	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BUPH_03859	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BUPH_03859	PWY-7494	choline degradation IV
BUPH_03860	PWY-5642	2,4-dinitrotoluene degradation
BUPH_03860	PWY-6373	acrylate degradation
BUPH_03872	PWY-6840	homoglutathione biosynthesis
BUPH_03872	PWY-7255	ergothioneine biosynthesis I (bacteria)
BUPH_03895	PWY-6840	homoglutathione biosynthesis
BUPH_03895	PWY-7255	ergothioneine biosynthesis I (bacteria)
BUPH_03905	PWY-5101	L-isoleucine biosynthesis II
BUPH_03905	PWY-5103	L-isoleucine biosynthesis III
BUPH_03905	PWY-5104	L-isoleucine biosynthesis IV
BUPH_03905	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BUPH_03910	PWY-6891	thiazole biosynthesis II (Bacillus)
BUPH_03910	PWY-6892	thiazole biosynthesis I (E. coli)
BUPH_03910	PWY-7560	methylerythritol phosphate pathway II
BUPH_03951	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BUPH_03964	PWY-6703	preQ<sub>0</sub> biosynthesis
BUPH_03965	PWY-6703	preQ<sub>0</sub> biosynthesis
BUPH_03975	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BUPH_03982	PWY-5344	L-homocysteine biosynthesis
BUPH_03985	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_03985	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BUPH_03996	PWY-2941	L-lysine biosynthesis II
BUPH_03996	PWY-5097	L-lysine biosynthesis VI
BUPH_03998	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BUPH_03998	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
BUPH_04023	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BUPH_04025	PWY-723	alkylnitronates degradation
BUPH_04040	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
BUPH_04066	PWY-5743	3-hydroxypropanoate cycle
BUPH_04066	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BUPH_04066	PWY-6728	methylaspartate cycle
BUPH_04066	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BUPH_04067	PWY-723	alkylnitronates degradation
BUPH_04076	PWY-5074	mevalonate degradation
BUPH_04080	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
BUPH_04081	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
BUPH_04082	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BUPH_04082	PWY-6578	8-amino-7-oxononanoate biosynthesis III
BUPH_04082	PWY-7147	8-amino-7-oxononanoate biosynthesis II
BUPH_04090	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BUPH_04090	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_04090	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BUPH_04090	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BUPH_04102	PWY-2201	folate transformations I
BUPH_04102	PWY-3841	folate transformations II
BUPH_04115	PWY-3961	phosphopantothenate biosynthesis II
BUPH_04116	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BUPH_04116	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BUPH_04124	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BUPH_04124	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BUPH_04129	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BUPH_04129	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BUPH_04130	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BUPH_04130	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BUPH_04130	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
BUPH_04155	PWY-1622	formaldehyde assimilation I (serine pathway)
BUPH_04155	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_04159	PWY-5667	CDP-diacylglycerol biosynthesis I
BUPH_04159	PWY-5981	CDP-diacylglycerol biosynthesis III
BUPH_04163	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BUPH_04166	PWY-3781	aerobic respiration I (cytochrome c)
BUPH_04166	PWY-4521	arsenite oxidation I (respiratory)
BUPH_04166	PWY-6692	Fe(II) oxidation
BUPH_04166	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BUPH_04181	PWY-6906	chitin derivatives degradation
BUPH_04181	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
BUPH_04181	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
BUPH_04184	PWY-7310	D-glucosaminate degradation
BUPH_04199	PWY-7560	methylerythritol phosphate pathway II
BUPH_04213	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BUPH_04213	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BUPH_04216	PWY-6605	adenine and adenosine salvage II
BUPH_04216	PWY-6610	adenine and adenosine salvage IV
BUPH_04219	PWY-2201	folate transformations I
BUPH_04219	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_04227	PWY-3781	aerobic respiration I (cytochrome c)
BUPH_04227	PWY-4521	arsenite oxidation I (respiratory)
BUPH_04227	PWY-6692	Fe(II) oxidation
BUPH_04227	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BUPH_04241	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BUPH_04245	PWY-6700	queuosine biosynthesis
BUPH_04246	PWY-5381	pyridine nucleotide cycling (plants)
BUPH_04246	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BUPH_04246	PWY-6596	adenosine nucleotides degradation I
BUPH_04246	PWY-6606	guanosine nucleotides degradation II
BUPH_04246	PWY-6607	guanosine nucleotides degradation I
BUPH_04246	PWY-6608	guanosine nucleotides degradation III
BUPH_04246	PWY-7185	UTP and CTP dephosphorylation I
BUPH_04252	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_04252	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_04255	PWY-5839	menaquinol-7 biosynthesis
BUPH_04255	PWY-5844	menaquinol-9 biosynthesis
BUPH_04255	PWY-5849	menaquinol-6 biosynthesis
BUPH_04255	PWY-5890	menaquinol-10 biosynthesis
BUPH_04255	PWY-5891	menaquinol-11 biosynthesis
BUPH_04255	PWY-5892	menaquinol-12 biosynthesis
BUPH_04255	PWY-5895	menaquinol-13 biosynthesis
BUPH_04267	PWY-1361	benzoyl-CoA degradation I (aerobic)
BUPH_04267	PWY-5109	2-methylbutanoate biosynthesis
BUPH_04267	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BUPH_04267	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BUPH_04267	PWY-5177	glutaryl-CoA degradation
BUPH_04267	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BUPH_04267	PWY-6435	4-hydroxybenzoate biosynthesis V
BUPH_04267	PWY-6583	pyruvate fermentation to butanol I
BUPH_04267	PWY-6863	pyruvate fermentation to hexanol
BUPH_04267	PWY-6883	pyruvate fermentation to butanol II
BUPH_04267	PWY-6944	androstenedione degradation
BUPH_04267	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BUPH_04267	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BUPH_04267	PWY-7007	methyl ketone biosynthesis
BUPH_04267	PWY-7046	4-coumarate degradation (anaerobic)
BUPH_04267	PWY-7094	fatty acid salvage
BUPH_04267	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BUPH_04267	PWY-735	jasmonic acid biosynthesis
BUPH_04267	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BUPH_04283	PWY-5386	methylglyoxal degradation I
BUPH_04309	PWY-6700	queuosine biosynthesis
BUPH_04310	PWY-6700	queuosine biosynthesis
BUPH_04313	PWY-5506	methanol oxidation to formaldehyde IV
BUPH_04316	PWY-3341	L-proline biosynthesis III
BUPH_04316	PWY-4981	L-proline biosynthesis II (from arginine)
BUPH_04316	PWY-6344	L-ornithine degradation II (Stickland reaction)
BUPH_04317	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BUPH_04319	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_04319	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_04320	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_04320	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_04322	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_04322	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_04323	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BUPH_04323	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BUPH_04323	PWY-6268	adenosylcobalamin salvage from cobalamin
BUPH_04323	PWY-6269	adenosylcobalamin salvage from cobinamide II
BUPH_04327	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BUPH_04327	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BUPH_04327	PWY-6164	3-dehydroquinate biosynthesis I
BUPH_04334	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BUPH_04334	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BUPH_04334	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BUPH_04342	PWY-5958	acridone alkaloid biosynthesis
BUPH_04342	PWY-6543	4-aminobenzoate biosynthesis
BUPH_04342	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BUPH_04342	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BUPH_04342	PWY-6722	candicidin biosynthesis
BUPH_04343	PWY-6654	phosphopantothenate biosynthesis III
BUPH_04345	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BUPH_04345	PWY-6148	tetrahydromethanopterin biosynthesis
BUPH_04345	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BUPH_04345	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BUPH_04349	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BUPH_04349	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BUPH_04349	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BUPH_04351	PWY-2781	<i>cis</i>-zeatin biosynthesis
BUPH_04362	PWY-1622	formaldehyde assimilation I (serine pathway)
BUPH_04362	PWY-181	photorespiration
BUPH_04362	PWY-2161	folate polyglutamylation
BUPH_04362	PWY-2201	folate transformations I
BUPH_04362	PWY-3661	glycine betaine degradation I
BUPH_04362	PWY-3661-1	glycine betaine degradation II (mammalian)
BUPH_04362	PWY-3841	folate transformations II
BUPH_04362	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_04382	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_04382	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
BUPH_04382	PWY-6638	sulfolactate degradation III
BUPH_04382	PWY-6642	(<i>R</i>)-cysteate degradation
BUPH_04382	PWY-6643	coenzyme M biosynthesis II
BUPH_04382	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BUPH_04382	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BUPH_04382	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BUPH_04383	PWY-6832	2-aminoethylphosphonate degradation II
BUPH_04385	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_04385	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BUPH_04385	PWY-6538	caffeine degradation III (bacteria, via demethylation)
BUPH_04385	PWY-6596	adenosine nucleotides degradation I
BUPH_04385	PWY-6606	guanosine nucleotides degradation II
BUPH_04385	PWY-6607	guanosine nucleotides degradation I
BUPH_04385	PWY-6608	guanosine nucleotides degradation III
BUPH_04385	PWY-6999	theophylline degradation
BUPH_04386	PWY-5497	purine nucleobases degradation II (anaerobic)
BUPH_04386	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BUPH_04386	PWY-6538	caffeine degradation III (bacteria, via demethylation)
BUPH_04386	PWY-6596	adenosine nucleotides degradation I
BUPH_04386	PWY-6606	guanosine nucleotides degradation II
BUPH_04386	PWY-6607	guanosine nucleotides degradation I
BUPH_04386	PWY-6608	guanosine nucleotides degradation III
BUPH_04386	PWY-6999	theophylline degradation
BUPH_04404	PWY-5659	GDP-mannose biosynthesis
BUPH_04404	PWY-6073	alginate biosynthesis I (algal)
BUPH_04404	PWY-6082	alginate biosynthesis II (bacterial)
BUPH_04404	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
BUPH_04405	PWY-6655	xanthan biosynthesis
BUPH_04405	PWY-6658	acetan biosynthesis
BUPH_04408	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
BUPH_04408	PWY-5739	GDP-D-perosamine biosynthesis
BUPH_04408	PWY-5740	GDP-L-colitose biosynthesis
BUPH_04408	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
BUPH_04409	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
BUPH_04431	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
BUPH_04440	PWY-6654	phosphopantothenate biosynthesis III
BUPH_04478	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BUPH_04478	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BUPH_04501	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BUPH_04501	PWY-7494	choline degradation IV
BUPH_04532	PWY-5340	sulfate activation for sulfonation
BUPH_04540	PWY-5686	UMP biosynthesis
BUPH_04541	PWY-5686	UMP biosynthesis
BUPH_04546	PWY-3221	dTDP-L-rhamnose biosynthesis II
BUPH_04546	PWY-6808	dTDP-D-forosamine biosynthesis
BUPH_04546	PWY-6942	dTDP-D-desosamine biosynthesis
BUPH_04546	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BUPH_04546	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
BUPH_04546	PWY-6974	dTDP-L-olivose biosynthesis
BUPH_04546	PWY-6976	dTDP-L-mycarose biosynthesis
BUPH_04546	PWY-7104	dTDP-L-megosamine biosynthesis
BUPH_04546	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
BUPH_04546	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
BUPH_04546	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
BUPH_04546	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
BUPH_04546	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
BUPH_04546	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
BUPH_04546	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
BUPH_04546	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
BUPH_04547	PWY-3221	dTDP-L-rhamnose biosynthesis II
BUPH_04547	PWY-6808	dTDP-D-forosamine biosynthesis
BUPH_04547	PWY-6942	dTDP-D-desosamine biosynthesis
BUPH_04547	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BUPH_04547	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
BUPH_04547	PWY-6974	dTDP-L-olivose biosynthesis
BUPH_04547	PWY-6976	dTDP-L-mycarose biosynthesis
BUPH_04547	PWY-7104	dTDP-L-megosamine biosynthesis
BUPH_04547	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
BUPH_04547	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
BUPH_04547	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
BUPH_04547	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
BUPH_04547	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
BUPH_04547	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
BUPH_04547	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
BUPH_04547	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
BUPH_05132	PWY-1361	benzoyl-CoA degradation I (aerobic)
BUPH_05132	PWY-5109	2-methylbutanoate biosynthesis
BUPH_05132	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BUPH_05132	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BUPH_05132	PWY-5177	glutaryl-CoA degradation
BUPH_05132	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BUPH_05132	PWY-6435	4-hydroxybenzoate biosynthesis V
BUPH_05132	PWY-6583	pyruvate fermentation to butanol I
BUPH_05132	PWY-6863	pyruvate fermentation to hexanol
BUPH_05132	PWY-6883	pyruvate fermentation to butanol II
BUPH_05132	PWY-6944	androstenedione degradation
BUPH_05132	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BUPH_05132	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BUPH_05132	PWY-7007	methyl ketone biosynthesis
BUPH_05132	PWY-7046	4-coumarate degradation (anaerobic)
BUPH_05132	PWY-7094	fatty acid salvage
BUPH_05132	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BUPH_05132	PWY-735	jasmonic acid biosynthesis
BUPH_05132	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BUPH_05147	PWY-3781	aerobic respiration I (cytochrome c)
BUPH_05147	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BUPH_05147	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BUPH_05147	PWY-6692	Fe(II) oxidation
BUPH_05161	PWY-1042	glycolysis IV (plant cytosol)
BUPH_05161	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_05161	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_05161	PWY-7003	glycerol degradation to butanol
BUPH_05167	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BUPH_05167	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_05167	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BUPH_05167	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BUPH_05169	PWY-6871	3-methylbutanol biosynthesis
BUPH_05170	PWY-5669	phosphatidylethanolamine biosynthesis I
BUPH_05171	PWY-5669	phosphatidylethanolamine biosynthesis I
BUPH_05172	PWY-5101	L-isoleucine biosynthesis II
BUPH_05172	PWY-5103	L-isoleucine biosynthesis III
BUPH_05172	PWY-5104	L-isoleucine biosynthesis IV
BUPH_05172	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BUPH_05173	PWY-5101	L-isoleucine biosynthesis II
BUPH_05173	PWY-5103	L-isoleucine biosynthesis III
BUPH_05173	PWY-5104	L-isoleucine biosynthesis IV
BUPH_05173	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BUPH_05173	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BUPH_05173	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BUPH_05173	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BUPH_05174	PWY-5101	L-isoleucine biosynthesis II
BUPH_05174	PWY-5103	L-isoleucine biosynthesis III
BUPH_05174	PWY-5104	L-isoleucine biosynthesis IV
BUPH_05174	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BUPH_05174	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BUPH_05174	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BUPH_05174	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BUPH_05181	PWY-7039	phosphatidate metabolism, as a signaling molecule
BUPH_05200	PWY-7183	pyrimidine nucleobases salvage I
BUPH_05202	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BUPH_05202	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BUPH_05202	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BUPH_05203	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
BUPH_05203	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BUPH_05204	PWY-5381	pyridine nucleotide cycling (plants)
BUPH_05204	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BUPH_05250	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BUPH_05250	PWY-5723	Rubisco shunt
BUPH_05257	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
BUPH_05257	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
BUPH_05257	PWY-6148	tetrahydromethanopterin biosynthesis
BUPH_05330	PWY-5381	pyridine nucleotide cycling (plants)
BUPH_05330	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BUPH_05357	PWY-5162	2-oxopentenoate degradation
BUPH_05358	PWY-5162	2-oxopentenoate degradation
BUPH_05358	PWY-5436	L-threonine degradation IV
BUPH_05358	PWY-5480	pyruvate fermentation to ethanol I
BUPH_05358	PWY-6587	pyruvate fermentation to ethanol III
BUPH_05358	PWY-7085	triethylamine degradation
BUPH_05358	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
BUPH_05367	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BUPH_05367	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BUPH_05368	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BUPH_05368	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BUPH_05369	PWY-1622	formaldehyde assimilation I (serine pathway)
BUPH_05369	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BUPH_05369	PWY-5913	TCA cycle VI (obligate autotrophs)
BUPH_05369	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_05369	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
BUPH_05369	PWY-6549	L-glutamine biosynthesis III
BUPH_05369	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BUPH_05369	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BUPH_05369	PWY-7124	ethylene biosynthesis V (engineered)
BUPH_05372	PWY-4983	L-citrulline-nitric oxide cycle
BUPH_05372	PWY-4984	urea cycle
BUPH_05372	PWY-5	canavanine biosynthesis
BUPH_05372	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BUPH_05372	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BUPH_05384	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
BUPH_05387	PWY-40	putrescine biosynthesis I
BUPH_05387	PWY-6305	putrescine biosynthesis IV
BUPH_05400	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BUPH_05401	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BUPH_05401	PWY-6855	chitin degradation I (archaea)
BUPH_05401	PWY-6906	chitin derivatives degradation
BUPH_05402	PWY-2723	trehalose degradation V
BUPH_05402	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BUPH_05402	PWY-5661	GDP-glucose biosynthesis
BUPH_05402	PWY-7238	sucrose biosynthesis II
BUPH_05402	PWY-7385	1,3-propanediol biosynthesis (engineered)
BUPH_05406	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BUPH_05407	PWY-6854	ethylene biosynthesis III (microbes)
BUPH_05416	PWY-5155	&beta;-alanine biosynthesis III
BUPH_05421	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BUPH_05421	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BUPH_05421	PWY-6269	adenosylcobalamin salvage from cobinamide II
BUPH_05423	PWY-5443	aminopropanol phosphate biosynthesis I
BUPH_05425	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BUPH_05425	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BUPH_05425	PWY-6269	adenosylcobalamin salvage from cobinamide II
BUPH_05426	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BUPH_05426	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BUPH_05426	PWY-6269	adenosylcobalamin salvage from cobinamide II
BUPH_05427	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BUPH_05427	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BUPH_05427	PWY-6269	adenosylcobalamin salvage from cobinamide II
BUPH_05432	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BUPH_05432	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
BUPH_05437	PWY-5101	L-isoleucine biosynthesis II
BUPH_05437	PWY-5103	L-isoleucine biosynthesis III
BUPH_05437	PWY-5104	L-isoleucine biosynthesis IV
BUPH_05437	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BUPH_05442	PWY-5988	wound-induced proteolysis I
BUPH_05442	PWY-6018	seed germination protein turnover
BUPH_05445	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BUPH_05446	PWY-5194	siroheme biosynthesis
BUPH_05446	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BUPH_05447	PWY-5278	sulfite oxidation III
BUPH_05447	PWY-5340	sulfate activation for sulfonation
BUPH_05447	PWY-6683	sulfate reduction III (assimilatory)
BUPH_05447	PWY-6932	selenate reduction
BUPH_05448	PWY-5278	sulfite oxidation III
BUPH_05448	PWY-5340	sulfate activation for sulfonation
BUPH_05448	PWY-6683	sulfate reduction III (assimilatory)
BUPH_05448	PWY-6932	selenate reduction
BUPH_05451	PWY-6683	sulfate reduction III (assimilatory)
BUPH_05494	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BUPH_05494	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BUPH_05514	PWY-5704	urea degradation II
BUPH_05515	PWY-5704	urea degradation II
BUPH_05516	PWY-5704	urea degradation II
BUPH_05523	PWY-6749	CMP-legionaminate biosynthesis I
BUPH_05527	PWY-3821	galactose degradation III
BUPH_05527	PWY-6317	galactose degradation I (Leloir pathway)
BUPH_05527	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
BUPH_05527	PWY-6527	stachyose degradation
BUPH_05527	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
BUPH_05527	PWY-7344	UDP-D-galactose biosynthesis
BUPH_05529	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BUPH_05529	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BUPH_05529	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BUPH_05537	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BUPH_05537	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BUPH_05537	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BUPH_05546	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
BUPH_05546	PWY-5940	streptomycin biosynthesis
BUPH_05547	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
BUPH_06221	PWY-1361	benzoyl-CoA degradation I (aerobic)
BUPH_06221	PWY-2361	3-oxoadipate degradation
BUPH_06221	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BUPH_06224	PWY-1341	phenylacetate degradation II (anaerobic)
BUPH_06224	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
BUPH_06228	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BUPH_06228	PWY-5723	Rubisco shunt
BUPH_06229	PWY-181	photorespiration
BUPH_06230	PWY-5958	acridone alkaloid biosynthesis
BUPH_06230	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BUPH_06230	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BUPH_06231	PWY-5958	acridone alkaloid biosynthesis
BUPH_06231	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BUPH_06231	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BUPH_06252	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BUPH_06273	PWY-3781	aerobic respiration I (cytochrome c)
BUPH_06273	PWY-6692	Fe(II) oxidation
BUPH_06273	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
BUPH_06273	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BUPH_06274	PWY-5663	tetrahydrobiopterin biosynthesis I
BUPH_06274	PWY-5664	tetrahydrobiopterin biosynthesis II
BUPH_06274	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BUPH_06274	PWY-6703	preQ<sub>0</sub> biosynthesis
BUPH_06274	PWY-6983	tetrahydrobiopterin biosynthesis III
BUPH_06274	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BUPH_06291	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BUPH_06291	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BUPH_06301	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BUPH_06301	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BUPH_06301	PWY-6897	thiamin salvage II
BUPH_06301	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BUPH_06301	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BUPH_06301	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
BUPH_06301	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BUPH_06302	PWY-6891	thiazole biosynthesis II (Bacillus)
BUPH_06302	PWY-6892	thiazole biosynthesis I (E. coli)
BUPH_06326	PWY-6164	3-dehydroquinate biosynthesis I
BUPH_06327	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BUPH_06335	PWY-2941	L-lysine biosynthesis II
BUPH_06335	PWY-2942	L-lysine biosynthesis III
BUPH_06335	PWY-5097	L-lysine biosynthesis VI
BUPH_06342	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BUPH_06342	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BUPH_06434	PWY-1042	glycolysis IV (plant cytosol)
BUPH_06434	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BUPH_06434	PWY-5484	glycolysis II (from fructose 6-phosphate)
BUPH_06434	PWY-5723	Rubisco shunt
BUPH_06434	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BUPH_06434	PWY-6886	1-butanol autotrophic biosynthesis
BUPH_06434	PWY-6901	superpathway of glucose and xylose degradation
BUPH_06434	PWY-7003	glycerol degradation to butanol
BUPH_06434	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BUPH_06434	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BUPH_06452	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BUPH_06561	PWY-6891	thiazole biosynthesis II (Bacillus)
BUPH_06561	PWY-6892	thiazole biosynthesis I (E. coli)
BUPH_06561	PWY-7560	methylerythritol phosphate pathway II
BUPH_06574	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
BUPH_06574	PWY-581	indole-3-acetate biosynthesis II
BUPH_06574	PWY-7308	acrylonitrile degradation I
BUPH_06639	PWY-6216	3-chlorobenzoate degradation II (via protocatechuate)
BUPH_06639	PWY-6217	3,4-dichlorobenzoate degradation
BUPH_06698	PWY-5692	allantoin degradation to glyoxylate II
BUPH_06698	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
BUPH_08137	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
BUPH_08137	PWY-581	indole-3-acetate biosynthesis II
BUPH_08137	PWY-7308	acrylonitrile degradation I
