        dnaA    2101 ..    2122 +  -7.1  -3.12351   CGCAGTACGACGCCG           GCGGGGGGC CGGG GCCGCGCGC            TTCAATCTAGCCGGA  52 208
   Bphy_0002    3299 ..    3326 +   -12  -5.02201   CCAACACGAAGAACA        CACCAA-GGGGCG CAG CGCCCCTTTGGCG        TTTTTATGGTGTTTT 100 46
        gyrB    5921 ..    5942 + -11.6  -5.76949   TAGTCAAATGAAAAA           CGCCAACC TATTCC GGTTGGCG            TTTTTTTTGCACATC 100 83
   Bphy_0006 NONE
   Bphy_0007 NONE
   Bphy_0008   11412 ..   11422 +  -2.4  -3.83844   TCCGTCGCCACGACT                 CGCG CAA CGCC                 TTGTTCGTTCATCGC  55 436
   Bphy_0011   14643 ..   14669 +  -3.6  -3.28712   GTTCGTCGAACGCCA         TCGGGTGCGC ACATCAA GCGCATGCGG         TTATGCGCCCGGCAA  47 271
   Bphy_0012 NONE
   Bphy_0013   16432 ..   16469 +  -4.9  -3.72324   GACGAGTGACGCGCA   CAATGA-CGAGGCGGT CGCACAC ATCGCCTCGCTCGTCG   TTCTTCATACGGGTG  57 32
   Bphy_0014 NONE
   Bphy_0015 NONE
   Bphy_0016   19607 ..   19644 + -23.5  -4.19258   TGCGCTCTTCACACA   GATACGCGCCGCGTGGT TTTC GCCACGCGGCGCGTTTC    TTTTGCGTAACGTCT 100 44
   Bphy_0017   20463 ..   20490 +  -6.2  -3.07043   GGGCTGATGCGCGCC        GCGGAC-GCGC TGACTTC GCGCTGACCGC        TGTTCGGCTCGTGAA  49 2
   Bphy_0018 NONE
   Bphy_0019   21973 ..   22000 + -18.4  -4.84602   TCGTTTTTCTATATT        GGCGGCTGCGCC TTCG GGTGCGGCCGCC         TTTGTTTGTTTATAT 100 45
   Bphy_0020   22430 ..   22455 +  -6.7  -3.64162   GCAGAAAGTGAAAAA         GGCCGGAAAGC TTTC GCTAACCGGTC          TTTCGAATACTTGGT  60 61
   Bphy_0022   25313 ..   25328 +  -5.4  -2.99837   CGCATGGGTACGCGC              GAGGTC TGCT GACTTC               CTTTCCTCTTTCCCG  49 14
   Bphy_0023   28021 ..   28031 +    -4  -3.41989   GCAATTTACGCGTAA                 CTAT TGA ATAG                 TTGGATTTTCTAGGT  49 26
   Bphy_0024   29157 ..   29190 +  -2.4  -3.78156   TGCGTTGCTTGCTAT     TACGTTGCCAGC TATGTTGACT GTTGGCAGCGTC      TTGTTACTACTGTTT  52 211
   Bphy_0025   29642 ..   29654 +  -5.5  -3.04461   TCACGTCAAGGCGAG                TCCTG ACG CGGGA                TGTTCGACCTGAATG  49 20
   Bphy_0026   30855 ..   30890 +  -8.9  -3.30203   ACATGGCCTCAGAAA    GCAAAAAGCCCAGCC GGTTAA GGCTGGGCTAAGTGC     TTGAATTCTTGGTGG  63 224
   Bphy_0027 NONE
   Bphy_0028   32529 ..   32546 +  -6.9  -5.04222   CGCGCATATAAAAAA             GCGGCCT TCGA AGACCGC              TTTTTAATTTACTTC  89 54
   Bphy_0030   35807 ..   35822 + -11.8   -4.1552   CTAACGCCCATATGA              GCCGCC CTCG GGCGGC               TTTCTTGAGCGCGTC  89 56
   Bphy_0031   37248 ..   37275 + -12.7  -5.06816   CAAGTCAATAAAAAA        GCGCAGTCACC GTAAAA GGCGACTGCGC         TTTTTGTTGCAGCCT 100 77
         def   42651 ..   42670 +  -6.4  -3.60296   AAGATGAAGAAGCTC            GCGCA-CGC AAT GTGATGCGC            TTTAGAATAGCCATC  60 11
         fmt   43707 ..   43744 +  -3.1  -3.06831   CACCATATGCCGTTC   GGCCGGGGCGCGCCGCG CTCG CGCGGCGCGTTAAAATC    TTCGGTGCAACTTGC  43 58
   Bphy_0037   44399 ..   44418 +  -5.6  -3.45433   GGCTCGGCGTCAGGC            TCGCCACG GCAA CGCGGTGA             TTGAATTTTTCCCGT  55 6
   Bphy_0038   45422 ..   45442 +   -14  -4.91109   GCTGCAATTTGAAAA            GGGGCGAG CATGA CTCGCCCC            TTTTTGTCGTACAAC 100 68
   Bphy_0039 NONE
   Bphy_0040 NONE
   Bphy_0041 NONE
   Bphy_0042   50883 ..   50911 +   -14  -4.39166   GGCCACCAGGATTCA       GCCCCAGGAAATC GCAA GATT-CCTGGGGC        TTTTCCTATGTGCGG 100 195
   Bphy_0043 NONE
   Bphy_0044 NONE
   Bphy_0045   53300 ..   53310 +  -6.8  -3.14132   CAGCCTGCTCGCGGC                 TGCG CCT CGCA                 TTGGTGGAGGCGCGC  54 186
   Bphy_0046 NONE
   Bphy_0047   54816 ..   54849 + -12.5  -4.50058   AGCAAAGCCGCAATG     AAAAACGGCGCCTGA ACTT TCAGGCGCCATTTTG      TTTTGCTTCTCGCTG 100 25
        gatC   62136 ..   62147 +  -7.2  -3.53012   AAACGGCGGCGCACT                GCGC CGTC GCGC                 TTTCCAGGAAAAACG  58 150
        gatA   63640 ..   63655 +  -2.4  -2.62184   CGACTGGCATCGCAT              GGCGCC GGCG GGAGTC               TGATATGGCAACACA  38 7
        gatB   65188 ..   65224 + -10.8  -4.32046   CGTGCCAGGCTGTGA   CGGGCTGTTGTCGCATC GAAA GTCGCG-CAACGGCCCG    TTTGCTTTTTCACCG  87 78
   Bphy_0056 NONE
   Bphy_0057   67380 ..   67398 + -10.3  -3.72576   CGCTCGCGTGCATGC             TCGCGCA ACGCA TGCGCGA             TTTCATGGCCGAGCA  74 477
   Bphy_0065   74792 ..   74833 +    -5  -3.85698   GAAGCCCAGCGGCTA CGGGCGACGCGAATCCGCC AGTGC GGCGAGATCGCGT-GTCAG TTTGTCGAACACCGG  59 66
   Bphy_0067 NONE
   Bphy_0068   78400 ..   78431 + -21.6  -3.90744   ACATGGCGCATGAAG      AAGGGCGGCGCTCC TCGC GGAGCGCCGCCCTC       TTGTTTGGCCGGCCC 100 53
   Bphy_0078   89361 ..   89388 + -19.2  -5.67063   GGCCGCAAAGAAAAA        CGCCCTGCATGC GAAC GCATGCGGGGCG         TTTTTTTCTGATGCG 100 93
   Bphy_0080   91068 ..   91107 +   -12  -3.01924   TGAACCCCTTGTCCC  GCCGCTGGC-CGGGGCCGC TAT GCGGCGGCGCGTCAGCGCC  TGTTCGACGCGAGTC  68 38
   Bphy_0082   92688 ..   92705 +  -9.8  -4.68593   ATGCGAGATAAAAAA             GCCGCC CATGTT GGCGGC              TTTTTCAATGGTGCG  89 60
   Bphy_0086   95816 ..   95853 +  -3.9  -3.31915   GTGCGGCCGCTGAAC   GCGC-CGCGTCGCGAGTG ATA CGCCGGCGACACTTGCGC   TCGTTTTTGTGCCCG  47 78
   Bphy_0087   97027 ..   97067 +  -2.4   -3.6682   CGTTTCCGCAAGCCT CGAGCGGCCAATCACTTGC GCGC GCACGTCGC-GGCCGATCG  TTTCGATGCCTGCGC  49 141
   Bphy_0088   97570 ..   97585 +  -5.4  -3.61715   CACCTGCAGCAGCGT              CGGCAGT GAA AC-GCCG              TTCTTCGCCGCCGTC  57 217
   Bphy_0104  114637 ..  114650 +  -9.5  -3.73647   TGAGGCGAACGGGCG               GCGCG CAAG CGCGC                TTGTTCATGGGTCCA  71 56
   Bphy_0105  115241 ..  115268 + -12.7  -4.17296   GTTCCCACATATTGA        TGCCCGCAGCC GGAACA GTCTGCGGGCA         TTTGTGTCTGTGGCG  95 142
   Bphy_0106  116548 ..  116588 +  -7.6  -3.34398   CTGCGGCGGTGACGC TGCGTCGGCCATTGCCGGTG TGT CGTCGGTGATG-CCG-CGCG TGTTTCGCCCGCACA  59 50
   Bphy_0107  117034 ..  117048 +  -5.6  -2.75064   CGCCTATAACAAGAA               GGGCTG ATA CAGCCA               TCGTTGGATGAACAG  46 19
   Bphy_0108 NONE
   Bphy_0109  119086 ..  119100 +  -2.8  -3.67976   GGCCGATGTGCCCCA               TCGC CCACGTC GCGA               TTTCGAATTCCTCAC  51 496
   Bphy_0112  122833 ..  122858 + -17.6  -5.18371   CAAGGCATCATAGGA         GGCACGCGGG TTCATT CCCGCGTGCC          TTTTGTTTTGTGCGC 100 106
   Bphy_0113  123895 ..  123909 +  -3.4  -3.55761   TTGCGCGCACGTACA               GCACGT ATC GCGAGC               TTTGAGCGATGCCTG  49 6
   Bphy_0115 NONE
   Bphy_0116  126754 ..  126777 + -10.2  -5.84381   ATGTGTTAAAGAAAA          CCGCGCC-CAC ATC GAGAGGCGCGG          TTTTTTTATTGGTCA 100 70
   Bphy_0117  128641 ..  128651 +  -2.4  -4.91459   AACTGCGCCTCCGTT                 GTCG CGT CGCC                 TTTTTATCAATGTTA  75 507
   Bphy_0121  131276 ..  131295 + -13.6  -5.18355   CGTCTGCTTAAAAAA            GGGCTGTG TGCG CACAGCCC             TTTTTGCTTTTTCAA 100 73
   Bphy_0123  132698 ..  132708 +  -2.4  -4.28548   TTGCGGACGCGAAAA                 GGGC TGG GCGC                 TTTTACTCGCTCGAT  60 72
   Bphy_0124 NONE
   Bphy_0125 NONE
   Bphy_0126 NONE
   Bphy_0127 NONE
   Bphy_0128  137918 ..  137946 +  -8.2  -2.71712   GGCGCCTTCCGGTAA        TGTTTGCGTGCA TCGAC TGTGCGCAAACG        GTTTGCACGCAAACA  53 193
   Bphy_0129 NONE
   Bphy_0130 NONE
   Bphy_0131 NONE
   Bphy_0132 NONE
   Bphy_0133 NONE
   Bphy_0134 NONE
   Bphy_0135  149031 ..  149042 +  -2.2  -3.38007   TTCCTATTTCATCCG                GGTA GAAT TGCC                 GTTTTAATTTATATC  44 54
   Bphy_0136  149950 ..  149972 +  -3.4  -2.56914   TCGCGCAAACCCTCA           TGCCGG CTGGCTTATGC CCGGCA           TCCATTCATCAAGTC  40 250
   Bphy_0137  151638 ..  151657 + -11.4  -2.57132   CGAGACAACGCGAAC            CCGCGCAG CAGT TTGCGCGG             CTTGTCAGCGCCAGG  64 49
   Bphy_0138  153120 ..  153141 + -14.4  -5.68023   ATGCACGAAACGAAA           CGGGCGCC CATCGC GGCGCCCG            TTTTTTTGCTTCTAC 100 49
   Bphy_0140  156488 ..  156502 +  -4.2  -3.63645   CGAGGAGCCGCACTT               CTGACA TCA TGTCTG               TCTTGTTCTTCTTGA  54 22
   Bphy_0141  157207 ..  157230 +  -8.8  -3.01712   GGTCAGGTTGGTGCG          CGGGCTTCTG GATG CATGAGCCCG           TATTCGACCACGGCG  60 7
   Bphy_0144  162430 ..  162451 +    -3  -4.25104   CGGCCACGAAAAGCG           CGCCT-GCA TTGTC TGCGAGGTG           TTTTCGTCGGAGCCC  64 206
   Bphy_0153  172284 ..  172298 +  -7.8  -4.08767   TAGAATCCGCGCCCG               TCGCGG CGC TCGCGA               TTTTGCGGCAATGCG  71 314
   Bphy_0154  173671 ..  173697 + -13.1  -4.09628   GCGCCGCCTGTCAAA        GCCCTG-GTTCC TCGC GGAACGCAGGGC         TTGTTCTTTCGGCTG  89 68
   Bphy_0155  174778 ..  174788 +  -3.2   -2.9834   TGAACGGCGCACGGA                 CGAT TGG GTCG                 TATCGTTATACTGCT  43 71
   Bphy_0156  178265 ..  178287 + -16.2   -4.4959   GCCGCAAAAGAAAAA           GGCCGCGCGC AAC GCACGCGGCC           TTTTCATTCATTGGA 100 47
   Bphy_0158  180876 ..  180900 +   -10  -4.56775   TGCGATCGGTGTCGT         CGAGCG-TCGC GGGC GCGGGCGCTCG          TTTTTCGGCACCAGT  89 486
   Bphy_0160  182081 ..  182106 +  -9.7  -4.86385   CGTCAATATCATTGT         GCCGCTCGAACT GAA AGC-CGAGCGGC         TTTCTTTTTGCAGGT 100 165
   Bphy_0167  187481 ..  187492 +  -2.2  -4.89393   CGTGTGAAAGCGACG                CTTC GCAA GAGG                 TTTTTCTAACGTTTC  75 334
   Bphy_0169  188841 ..  188863 + -17.8  -4.86621   GCGCGAAACGAAAAA           GCCGCTTCGA CAT TCGAAGCGGC           TTTTTCGTTGGAGGT 100 51
   Bphy_0182  203872 ..  203897 +   -14   -5.1675   GCACCAACGCAAACA         GCCCGG-CCGC ATCAC GCGGGCCGGGC         TTTTTTGATGCGTCG 100 74
   Bphy_0189  211531 ..  211550 +   -15  -5.28481   ACGCGCAAACAAAAA            GCCCGTCG TGAC CGACGGGC             TTTTTTCATTGCGTG 100 40
   Bphy_0196  220988 ..  221015 +  -8.4  -2.71263   CCGCTACACTGACGC        TCGCGCGAGG-TC ATC GAGCCTCGTGCGC        TGATTCGCGCACATT  53 111
   Bphy_0197  222289 ..  222304 +  -8.2  -3.59979   GTGGGTATATCAGCC              GCGCTG AACG CGGCGC               TTTCGGGTGACGCAG  64 19
   Bphy_0198  223284 ..  223309 +  -3.1  -2.52464   CGCAAAACCGTCACG         GCACGCGGC GCACGATA GCCGCGCGA          TCGCTTCGCAAACAG  40 72
   Bphy_0199  224255 ..  224277 +  -6.1  -4.22214   ACATCCGTTTGACAC           CGTGCGGGC AACGC GCGCGCTCG           TTGTTTTACGTCAAT  68 123
   Bphy_0200  225639 ..  225673 + -14.4  -4.31397   GCCGCACAGAAACAC    G-ACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTC    TTCTTTTGTCACCGT 100 75
   Bphy_0201  226197 ..  226233 + -12.1  -2.74501   CGCGCTCAAGGCTGA    ACGCAACGACGCGAGCC TGC GGCCCGCGTCGTCGAGC    GTTTGCGGCGTTACT  69 26
   Bphy_0205 NONE
   Bphy_0206  230562 ..  230611 +   -10  -3.10112   ACGCGCAAGCCGCCG GCGGGTG-CGATGCGGCATGCAT GGGCG ATGCGGGCTGCATCGTCAGCCGA TTGAGTCGATTGAGT  64 65
   Bphy_0207 NONE
   Bphy_0208 NONE
   Bphy_0209  233441 ..  233459 +  -5.8  -2.77899   GGCATTGCTGGCGAA             AGGGCGCG GGT CGCGCACG             TGATTCGTCGAACGG  46 4
   Bphy_0210 NONE
   Bphy_0211  234712 ..  234728 +  -4.3  -4.34482   AATTGTCAGGCAGCC              GCGCGTA TAA TGAGCGC              TCTTTTTTTGGGCGC  68 139
   Bphy_0212  236250 ..  236262 +  -9.1    -3.272   TCTGCGGCTTGCTTT                TGCGC CGC GCGCA                TTCATATAGGGTGAT  63 69
   Bphy_0213  236631 ..  236658 +    -7  -4.46212   CCGCCTGCGTCGCCG        GAAGCTGGACGTG CAA CGCGTCCAG-TCC        TTTTGTCCTGGCCGC  76 82
   Bphy_0215  238071 ..  238125 + -14.2  -3.57144   TTATTGCTCTCGCGA TCGGCGAGGTGCGCGGGATTTCGGTA AAC TGCCGCAATCATGTGTGCCACGCCGG TTTCACCATCCCCCG  88 59
        lipB NONE
   Bphy_0217  239930 ..  239945 +  -8.2  -5.86976   CCGCTTGAAGAAAAA              GCTCGC GAAA GCGGGC               TTTTTTGTTTTCTGA 100 60
   Bphy_0218  241864 ..  241886 +    -9  -3.67976   TTGCGCTTCAATTGC           GCGAACGACG CGA CGTCGGCCGC           TTTGCGATTCGTGAC  65 73
        ugpQ NONE
   Bphy_0221  245013 ..  245028 +  -3.9  -3.87994   AGTCAGCGCTGCATG              GTCCG GCGATG CGGGC               TTTCTCCGCCTGCAT  56 48
   Bphy_0222 NONE
   Bphy_0223 NONE
   Bphy_0224  247952 ..  247973 + -10.1  -2.54387   AGCCTTATGCAACAA           GGCGTTCGG AAAT CCGGACGTC            TGGATTCCGGATTTC  60 46
   Bphy_0225 NONE
   Bphy_0226 NONE
   Bphy_0227  253157 ..  253167 +  -2.4  -4.08216   AGACCGGTCAGGTTG                 TGCC CAA GGCC                 TTTTCCAGCAACTGG  57 118
   Bphy_0229  254549 ..  254573 + -11.5  -4.26202   CACGGAACTTTTTTT          GTTACCCACAG GAT CTGTGGATAAC          TTTGTTAGTAACTCT  89 120
   Bphy_0231 NONE
   Bphy_0232 NONE
   Bphy_0233 NONE
   Bphy_0234  262419 ..  262439 +  -6.8  -3.65902   AAATCGCCATCGAAA            GCGCGTTC GTCGA GAGCGTGC            TTTGAGTCCCGTACC  59 184
   Bphy_0236 NONE
   Bphy_0237  270387 ..  270415 +  -7.3  -2.57344   CGCATCCGTTAAGCA        CCGCCAGAACTCT CGG AGCGTGCTGTCGG        CTTGTCCACCGACTC  50 497
   Bphy_0242  281118 ..  281131 +  -4.5  -3.31144   TGCCGCTTCCAGATC               GGCAG CGGA TTGCC                TTCTCCCCATCGAAC  49 155
   Bphy_0243  281884 ..  281901 +  -5.5  -4.57341   GTCAGAAAACAAAAA             CCGGC CTAAGTGA GCCGG              TTTTTAACGAGAATT  74 174
   Bphy_0244 NONE
   Bphy_0245 NONE
   Bphy_0246  292831 ..  292842 +  -5.8  -3.39327   GCATGCATGTTCAGG                GTCG GGCG CGAC                 TTCTGGATATCGAAC  52 364
   Bphy_0249 NONE
   Bphy_0250  296833 ..  296846 +  -2.3  -4.41494   TCTCATCTACTACTA               GACCG CTTT CGATC                TTTTACTTCCCGATG  63 128
   Bphy_0251  297956 ..  297969 +  -3.9  -3.53091   CCAACTTTTCAACAT               TATCT AAAG AGATA                TTTCGGGCGCCGCGT  51 110
   Bphy_0253  298791 ..  298803 + -10.5  -3.21912   CAAGGGCGTGGACAG                CCGCC TTC GGCGG                TTCCTCAGTTGCACA  65 114
   Bphy_0256 NONE
   Bphy_0257  301813 ..  301831 + -13.1  -5.14563   AGCGCAGCGACTTTG             GCCCGCC TTCAC GGCGGGC             TTTTTTCATGCCGCG 100 78
   Bphy_0258  303403 ..  303442 +  -9.3  -3.70902   GACAAGAACTTCGGC GGCAG-CACG-CGCGGGCGG ATG CC-CCTGCGACGCGTCTGCC TTTCGCTATAACGAA  71 125
   Bphy_0259  304575 ..  304594 +  -4.2  -3.53224   GGAAGCAGCCCGCAA            GGGCTCGCA TGA TCCG-GCCC            TTTGGCGGCCCGATC  52 151
   Bphy_0260 NONE
   Bphy_0261  305588 ..  305617 + -15.8  -4.07568   CATTCGTTTTGACTG       GAAGACGCCGCG CGATGT CGCGGCGTTTTC        TTTTGGCCGGCCGCA 100 55
   Bphy_0262  307575 ..  307626 + -10.4  -3.06492   AATTTACTTTACGAA CGATGCCGC-TCGC-CGCACA-CCGGG CAA TCCGGCTG-GCGCGCGATGCG-CATCG TATTCCACTCCATCC  64 80
   Bphy_0265  310942 ..  310963 +  -7.9  -3.64049   CAGACCAGCACCTGC           TCGTCGCCG AACC TGGCGGCGG            TTTCGGCCTTGTTCA  63 468
   Bphy_0267 NONE
   Bphy_0268 NONE
   Bphy_0269 NONE
        gpsA NONE
   Bphy_0271  314959 ..  315005 + -10.6  -2.53263   GTAGAAAACTAGTTT TTCGGCGTGCGCAGCGCGACGA GAT TCGTCACGCGACGCGCACCGGC TGCCTTCAGCGTGCG  60 493
   Bphy_0274 NONE
   Bphy_0275  317553 ..  317566 +  -6.7  -3.14878   TCCGGCAGTGCCAGG               CGCAA AAAG TTGCG                TATTGAATTGCGCGC  54 6
   Bphy_0276 NONE
   Bphy_0277 NONE
   Bphy_0278 NONE
   Bphy_0279 NONE
   Bphy_0280 NONE
   Bphy_0281  323213 ..  323240 + -13.4  -3.54029   AGAAGTCGTAGACAG        CGCCGCCCTCGAC CCA GTCC-GGGCGGCG        TTGTGCTTGATGGGA  86 117
   Bphy_0283 NONE
   Bphy_0284 NONE
   Bphy_0285 NONE
   Bphy_0286 NONE
   Bphy_0287  327881 ..  327900 + -13.6  -5.45802   ACGCTGAAACGAAAA            GGCTGCAC GCGC GTGCAGCC             TTTTTCTTTTGGACG 100 61
   Bphy_0289  330254 ..  330271 +  -9.8  -5.26119   CGATCGATCATCCAG             GGCCGC CGCTGT GCGGCC              TTTTCTTTTTCGGAC 100 50
   Bphy_0290  331318 ..  331339 + -12.9  -5.60993   CGCAAACTCGGAAAA           GCGCCACGG GGAA CCGCGGCGC            TTTTTTTATGCGCGG 100 56
   Bphy_0292  333393 ..  333408 +  -3.9  -3.79747   GACTACTACGATTTC              GTCGC TGAATT GCGGC               TTTGATCCTGCGTGC  54 5
   Bphy_0293 NONE
   Bphy_0294 NONE
   Bphy_0295 NONE
   Bphy_0296  340106 ..  340126 + -15.4  -4.33258   TTCGTCGCTAAAGAG            CCGGCGCC CTCGA GGCGCCGG            TTTCTATTTGCGGCT 100 61
   Bphy_0302 NONE
   Bphy_0303  345949 ..  345974 + -13.3  -3.69354   TGAGCGGTCCATGCG         CGCCGGCGA CGGGTGAA TCGCCGGCG          TTTGCGCTTCTGCGG  88 84
   Bphy_0306 NONE
   Bphy_0307  350838 ..  350862 +    -5  -4.49756   GCAAGCAATAAAAAA          GGGCGTCA GGCGACCGA TGACGCTC          TTTTCGTATTTCGCC  70 77
   Bphy_0309  353090 ..  353107 +  -6.9  -3.34962   AGACGAGTTCTGCGA             GGCGTGC TGCC GCAAGCC              TTCTAGCCTGTAGAG  56 98
        coaD NONE
   Bphy_0311  354066 ..  354094 + -17.5  -5.20333   TAGTCTGGCTGAATG        CGGCACCGCGT GTAATCG ACGCGGTGCCG        TTTTTGTTATCGCTG 100 46
   Bphy_0319 NONE
   Bphy_0320  363515 ..  363532 +  -5.5   -4.7173   GATGCGCTCGAGCAC             TTCCGCG CACG CGCCGAA              TTTTTCCATCTGCTG  82 255
   Bphy_0332  374972 ..  374997 +  -3.1  -3.72027   ATCGGCGCGCGGGGG         CGGCGGCGGCC TGAC GTTTGCTGTCG          TTCTTCATCGCAGAT  54 12
   Bphy_0333  375695 ..  375709 +  -4.2  -2.64827   CAAACAACGGAGTGT               TTGCGC GAT GCCCAA               CTTCCTGCTTTTTCT  43 44
   Bphy_0334  376320 ..  376331 +  -2.2  -3.17982   TTGCGCGACTGAGTC                GGGT CGGT ACTC                 TTGCTCGCGCTTTAT  43 29
   Bphy_0335  377198 ..  377208 +  -2.4   -3.4439   CATCGACGCGCTGTT                 CGAG CCG CCCG                 TTCTCGATTGATCTG  47 4
        purU  378178 ..  378206 + -15.3  -5.05782   TTTATTTCGTCTGAA       CCGGCGCGTGCC TTGCTC GGC-CGCGCCGG        TTTTTTGGGGTGAAT 100 47
   Bphy_0340 NONE
   Bphy_0341  386102 ..  386124 + -14.8  -5.40072   GAATGCAAGAAAAAA           CACCCCGCCC ATC GAGCGGGGTG           TTTTTTTAAGGGCAG 100 84
   Bphy_0343  388384 ..  388416 +  -9.8  -3.16564   TCGAAATGCGCGGGT     AGTGGCC-CGCGGGC GGCT GTTCGCGCGGCCACG      TTGCTGCAATCGCCG  60 466
   Bphy_0345  390797 ..  390829 +   -20  -3.45571   CGGCACGAAGCAAAC     CGGCGGTGC-AGGCA TCGT TGCCTTGCACCGCCG      TTCGTATTTGCAGAG 100 88
   Bphy_0353  398848 ..  398871 + -13.2  -4.62102   AGCACTCATTTTTGA          GGCGTTCGAT AGAT GTCGAACGCC           TTTTCCTGTTTTTAT 100 61
   Bphy_0354  400176 ..  400196 +  -2.4  -3.87869   GGATGTCTGATTCTC            GCCGGCTA ACGGA TCGCCGGA            TTTATACCAAGTTGC  54 76
   Bphy_0355  400979 ..  400991 +  -3.4  -3.32963   TAGAGAATTGACCGT                TGTC GAGGG GACA                TTGTGCGATGACGGT  47 60
   Bphy_0356  401763 ..  401783 + -12.7  -3.28712   TGTGGCGCCACGTCA            TTGATTCGC GAT GCGAATCAA            TTGTGACCAGGCGCA  76 118
   Bphy_0357  402592 ..  402609 +  -3.4  -2.60723   CGTCGCGGCGAGTCG             GCGTGA GCGCCA TCATGC              ATTGCTTACGCGTCC  40 20
   Bphy_0358  407135 ..  407152 +  -5.5  -2.75481   GGCTTGGCGTGAGTG             CG-CGTGC CTC GCGCGCCG             TACTTCGAATTGCAC  46 97
   Bphy_0359  407713 ..  407743 + -22.7  -3.66178   GGCAGGGCAACATAA       TGGCCGGAACCGC CAACA GCGGTTCCGGCCA       TTTGCGATTCGAACG 100 49
   Bphy_0360  409116 ..  409133 +  -2.6  -3.70902   GATGAAGTAGCCATA             GTCGGC ATCGTC GTCGGC              TTTCGATGTGCCGCC  53 334
   Bphy_0362  411348 ..  411358 +  -3.2  -3.08314   CCGGTCGTCCATGTA                 GACT GAC GGTC                 GTTTTAGCGCTTCGG  43 20
   Bphy_0363  411874 ..  411902 +  -5.9  -3.14132   GAAGAAATAAAAAAA        GCGGCACTATG CAGTTCA CACAGCGCCGC        TTGCTCGACGAGGCG  50 39
   Bphy_0365 NONE
   Bphy_0366  415744 ..  415770 +  -4.3  -3.05463   TTTGATTTGATTTTG         ATGCGTTCGCG TCGAT TGCGGACGCGC         TTACATGACAGGAGT  46 36
   Bphy_0367  416163 ..  416177 +  -4.2  -4.06089   TTGTGTTGCGTATAA               GAAGCC TGC GGCTTG               ATTTTTTTTGCAATG  61 10
   Bphy_0371 NONE
   Bphy_0372 NONE
   Bphy_0373 NONE
        ubiE NONE
   Bphy_0375  427201 ..  427226 + -19.7  -4.79451   ACGTTACAATAGGAA         CCCGCGTCGGC AGTC GCCGGCGCGGG          TTTTCTCTTTCCACT 100 89
   Bphy_0376 NONE
        ubiB NONE
   Bphy_0378  430185 ..  430202 + -14.1  -3.66874   CCCCATCTGCTAGCG             CGGCCGG GATG CCGGCCG              TTTCCCTCGAATTCG  88 57
   Bphy_0379  430669 ..  430691 +    -9  -3.87815   CGAGGTGACGTAGAC           GCCGCGCAAC GCA GTCGCGCGGA           TTTCTGGCGGTACAC  73 58
   Bphy_0380 NONE
        aspS  433291 ..  433319 + -12.5   -5.0538   TGTGCAAAGAACCAA        CGAAAAAGGCGCG TTA TGCGCCTTTTTCC        TTTTTTGCGATAAAG 100 81
   Bphy_0382 NONE
   Bphy_0383  435328 ..  435365 +  -9.2  -5.30616   TAAATTTCTTGTTTC   GCGGACGGTCG-GCCAT CAATA ATGGTACGACCGTTCGA   TTTTTCTTTCGGTCA 100 194
   Bphy_0384  436070 ..  436082 +  -3.4  -2.60075   GCAGCGGGGCTCGAG                CCAA CACCT TTGG                ATTGATTGGAGAGAC  40 90
   Bphy_0385  437892 ..  437927 + -10.2  -2.87344   CGCTGTTCTAAGCCA    TCGAAGGCGGCGCACG CGGC CGTGCGCCGCCCACCC     TCTCTCACACCCATG  62 30
   Bphy_0386 NONE
   Bphy_0387  441678 ..  441699 +  -4.3  -4.62336   TTGATGTCTTGCTCG           C-GGCGCGGC CCT GCCCTGCCAG           TTTTTGAGCTGGCAT  73 37
   Bphy_0388  443048 ..  443071 +  -3.9  -3.64703   CGGGCACGCGTTCGG          GCGTCAGATC GAGCA GATC-GATGC          TTTCAATCCCGCACA  53 466
   Bphy_0390  444117 ..  444137 +  -8.2  -2.91582   AAGGTTGGCGCGTAA            AGCGCTGC GCCCG GCAGCGCC            TGTATCGCTCGCGTC  55 102
   Bphy_0391  447457 ..  447486 + -10.7  -4.15044   TGTCGGTCGCGACAT       AGGTGAGGGTCGC TTCC GTGACCTTCACCG        TTTCTTCCGCGAGGC  79 136
   Bphy_0393  450461 ..  450476 +    -6  -3.01924   AACGGCCACGAACAC              CTCCGG CTTG CCGGCG               TCTTCCAGCAACGTC  48 489
   Bphy_0396  454587 ..  454607 +  -5.3  -2.63853   CATCCGGATCGAAAA            GACGGGC CGAGCGT GCCCGAC            ATCTTTGGAGTATCT  46 145
   Bphy_0397 NONE
        pdxA NONE
        ksgA  457949 ..  457965 + -10.8  -4.88163   AGATCAGTGTAGACA              GCCCGC AACAC GCGGGC              TTTCTTTTATCTTCC 100 93
   Bphy_0400  459244 ..  459257 +  -3.7  -3.59301   CTGAAGGTTGTCACT               CAGCG AACG CGCGG                CTTTTTCTGTACATT  51 37
   Bphy_0401  459858 ..  459875 + -12.7  -3.25823   CGGACTATGGTTCAT             CTCGCGC AAAT GCGCGAG              TTCATGTGCGACGAC  74 186
   Bphy_0414 NONE
   Bphy_0415  475038 ..  475057 + -11.4  -3.29144   CCTTCACTAGTGCTT            GCTCCGCG CCGG TGCGGAGC             TTCTGGAGGCAATCA  72 243
   Bphy_0416  476132 ..  476166 +  -4.9  -4.27886   TGTGATCTGTCCGTT    CGTCG-CATGGCAGCCG TTT CGGCTGGCGGGGCG-CG    TTTGTCTGTTTGCAA  65 396
   Bphy_0417 NONE
   Bphy_0421  481967 ..  481977 +  -2.4  -4.61231   CGCCATTGCTGCAAG                 CCCG ACG CGAG                 TTTTTCGAGCTCTAC  70 289
   Bphy_0424  484492 ..  484504 +  -4.8  -4.62783   CCCGCTCGCGAAGAT                CACG CAGCA CGTG                TTTTTCCGCTGAATG  73 1
   Bphy_0425  485086 ..  485113 + -13.4  -3.81027   GGCACATAGGAGCGG        GACGTCCGCGGT GAAA GCGGCGGACGTC         TTTGCATTGCTTCAG  91 32
   Bphy_0430 NONE
   Bphy_0431  491909 ..  491929 +  -6.7  -3.29511   TTCAGCAAGGAGTGC            GCCAAGCGC TTG GCGATGGGC            TTGTGCAAGGCTGGG  56 417
   Bphy_0434  494727 ..  494757 +  -6.1  -2.79291   TCCCGCGCCGCTCGG      CGCCGTCACCA-GA CCCC TCGTGGCGACGGCA       TAGTTCATCCGGTTT  46 499
   Bphy_0436  495458 ..  495497 + -16.6  -3.73224   GAACAGCTCGGGAAA  TGAAAAAGCCGCTGTTTC GTGA GAAACAGCGGCTTTCGCA   TTTGGTGGCGAATCA 100 107
        recA NONE
   Bphy_0441  502082 ..  502098 +  -2.1  -3.01791   TGCTCCAGCAAGCGC              CTGCGAG CTT CGGGCAG              TCTTAAAAACGCAGT  41 121
   Bphy_0442 NONE
        sucC NONE
   Bphy_0444  505141 ..  505158 + -10.5   -5.2112   GATAAGCTCAAGAAA             CGCCGGT CGAC GCCGGCG              TTTTTTGATACTCTT 100 51
   Bphy_0445  506089 ..  506117 +   -16  -4.05788   CTCGCTACGATCGAA        GCGCCTGTCCTG ATTCC CGGGGCAGGCGC        TTTCGTTTCGAGGAG 100 125
   Bphy_0446  507041 ..  507061 +  -6.8   -4.7497   CAATTGAAGCAGTAG            ACGTGCTC CTTGT GAGCACGC            TTTTTAGTGAATGCG  85 309
   Bphy_0447  509686 ..  509709 + -10.3   -3.2614   GTCGTAGCTAAGCCG          GCCCCGTTG CAGCAC TAACGGGGC           TTCGTATAAGAAATA  65 8
   Bphy_0448  511646 ..  511664 +  -8.8  -3.14564   TCGTCAGAAGGAAGG             CGGCGC GGCAAGA GCGCCG             TTCATGCAAGGATCA  61 53
   Bphy_0450  514179 ..  514195 +  -2.1  -3.57144   CGCGACGCCGTCGCG              CCAGCGA AAT TCGCCGC              TTTGCCCGTCGGAGG  50 136
   Bphy_0457 NONE
   Bphy_0458  520216 ..  520226 +  -2.4  -3.21395   GCTGGTGTTCACGGC                 GCTG CGG CTGC                 TCTTCTGACCGGGCT  43 7
         pgk  521745 ..  521777 +  -2.5  -3.54424   CCGCACAGGCGCTGC      AATCCGGGGCCGC GGCACAG GCGGCCTCGCAAA      TTTCCGGCAATGCGC  47 125
   Bphy_0460 NONE
   Bphy_0461  524935 ..  524964 + -12.9  -3.99986   AGGTTGTCGTCAGAT       CGCCGTTC-CCGCA TGA TCCGGGGAACGGCG       TTTCCCTTTTGTTCC  89 74
   Bphy_0462 NONE
   Bphy_0463  526454 ..  526464 +  -2.4  -3.24021   TAAAAGCTGGCGGTT                 CCGC TTC GCCG                 TTCGATGTTTCACCC  43 38
   Bphy_0464 NONE
   Bphy_0465  528816 ..  528841 + -20.5  -4.18018   CCTTCCAAAAACAAA         GAGCCCGGCTC GCGA GAGCCGGGCTC          TTTTGCATCGCAGGA 100 61
   Bphy_0469 NONE
   Bphy_0470  534846 ..  534861 +  -4.6   -3.6003   ATCCAGCAAGGCTTT              CATCGC GGCT GCGTTG               TTTAAGACTGATTTA  54 48
   Bphy_0471  536523 ..  536555 + -16.4  -3.72324   CGGTCATGGAAAAAG     TGGCGGTTCGCTGCG TGTT CG-AGCGAGCCGCCA      TTCTTCGTACAGGTC  95 109
   Bphy_0472  537404 ..  537424 + -12.6  -3.66178   TTGGTCAATAATGAA            GCCACGGA CACGC TCCGTGGC            TTTCGCATTCGAAGC  82 251
   Bphy_0473  538020 ..  538033 +  -3.7  -3.14211   ATCAGACGTCCTGAT               CCCGC CGTC GCGCG                TTCATCGGGGAGGCT  45 27
   Bphy_0474  539008 ..  539047 +  -4.8  -3.05384   TCGACTCGATCGGCT  CGTCCGTGCCTTCGAGCAG TTG CTGCGCGCGCGCAAGG-CG  TTGCGTCAGAAGCCA  47 235
   Bphy_0476  540979 ..  540990 +  -7.2   -3.5764   CACGTTCATGTCGGC                GGGC AGTT GCCC                 TTTGGAGATCGCGTT  59 289
   Bphy_0478 NONE
   Bphy_0479 NONE
   Bphy_0480  547905 ..  547924 +   -15  -5.75945   TTTCCGACTGCAAAA            CGCCACGG CATG CCGTGGCG             TTTTTTTTGCGCGCT 100 70
   Bphy_0482  551395 ..  551438 +    -3  -2.73875   GTCGCATGAGGACAA TCGCGCGAC-GCGGCTTGC CATTCAC GCGGCCTGCAGATGCGCGA TCATGTTCGGAGCGC  39 51
   Bphy_0483 NONE
   Bphy_0484  553557 ..  553581 + -17.2  -4.65933   GTGTAGAAAGCAAAA          CGGGGTGGCT CCTTT AGCCACCCCG          TTTCTTTTCGCGCTA 100 56
   Bphy_0489 NONE
   Bphy_0490 NONE
   Bphy_0491 NONE
   Bphy_0492 NONE
   Bphy_0493  561991 ..  562005 +  -4.2  -2.66695   CGTAAGAACTCGATG               TAGCAG GGA CTGCAA               ATATTTCGTACGGGA  43 36
   Bphy_0494  563205 ..  563231 + -15.2  -4.13995   TACATCGCAAACAGG         GCGCCGTTGC TATCGCT GCAACGGCGC         TTTGCTTTATGAAAG  95 51
   Bphy_0495  565678 ..  565704 + -11.5  -3.22102   CGGCGATCAGCGGCG         CGGGCAGCAGG AAGTG CTTGCCGCCCG         TCTTCTCGGAGATGT  68 497
   Bphy_0499 NONE
   Bphy_0500 NONE
   Bphy_0501 NONE
   Bphy_0502 NONE
   Bphy_0503 NONE
   Bphy_0504 NONE
   Bphy_0505  578591 ..  578607 +    -5  -2.75844   TTCGTCATAGAAAGA              CGGCGC CTCGA GCGCAG              CTTTGACCTCGGCAA  44 525
   Bphy_0509  582202 ..  582219 +  -9.1  -2.82635   CGTAATGCCGATCAG             CGCGC-CC GAC GGTGCGCG             TGTCGTAATCACGGT  58 480
   Bphy_0511  583237 ..  583252 + -11.8  -5.26119   GCCGTTGTTCGACTA              CGCGGC TTCG GCCGCG               TTTTCTTTTTGCGCG 100 95
   Bphy_0515  587629 ..  587645 + -11.5   -4.0274   GCGTGAATCAAAAAA              CGCGGCT CGT GGCCGCG              TTCTTTCGTAGTCGC  84 58
   Bphy_0518  590621 ..  590633 +  -4.7  -4.45175   ATTCTTGCATGCGGC                GCGGC TTT GCCGG                TTTGGTTTTTTGCTC  70 65
   Bphy_0521  594080 ..  594109 +  -5.5  -3.63627   GGTGCGCGAGCATGT       CGCGTGGGCGCTG GAAG CGGCGTGAGCGCG        TTTCGCGTCTGGCGA  57 1
   Bphy_0522 NONE
        xerD  595915 ..  595936 + -11.5  -2.52623   TGCATCGCACCGTCC           GCGTCCTCG CGAG CGAGGTCGC            CTGTTCTGAGCCAGC  61 381
   Bphy_0525  597846 ..  597873 +    -4  -4.16284   GATTGACGGCTGAGG        CTGGT-GCGCACG CGT CGCGCACAACCGG        TTTGTTAAAGCATGT  62 35
   Bphy_0526  599102 ..  599137 +  -3.9  -4.75174   CCCTTGAAGTCGAAG    CGCG-TCGAGATTTCC TTGTT GGACTGCTCGATCGCG    TTTTTCACTTCGATC  78 501
        murB  600444 ..  600466 + -16.3  -3.95435   GCCTGAAAACAAAAA           GCGCCGGGT GTCGA ACCCGGCGC           TTATGTTTTGCGGAC  95 70
   Bphy_0530  602268 ..  602281 +  -9.5  -5.74122   AGGACGGCAATGAAA               CCCGC ATCG GCGGG                TTTTTTTATGTCCTC 100 68
   Bphy_0532 NONE
   Bphy_0533  605615 ..  605642 + -12.7   -4.4078   CGCTGCAAACGAAAA        CGCCTGCGCAG CTTTCA CTACGCAGGCG         TTTTCATTCCAGCGC 100 55
        xseA  611755 ..  611767 + -10.5  -4.11216   GCATTAATTACGCTG                CGCGC ACA GCGCG                TTTTCGCAATGAACG  80 99
   Bphy_0540  612517 ..  612534 + -11.3  -5.61881   CAGCGTCGACGAAAA             GCCCTCA TTCA TGAGGGC              TTTTTCTTTTTCAGA 100 75
   Bphy_0543  615524 ..  615542 +  -5.9  -2.71364   TGCGATGCTTTGGCC             CGTGCGC TGCGC GAGCACG             TCGTTCAGGCGCTCG  46 191
   Bphy_0545  617345 ..  617366 +  -7.1  -3.30771   CTTCGCGCGCTGCGA           CGCGCGGCC CGAC GGCAGCACG            TTGTCGCCAATCTGC  55 218
   Bphy_0549  622343 ..  622375 + -15.5  -2.62184   CGCGCTCGATGGCCG      CGAGCGCGTAGTCGA CGG TCGGCTCCGCGCCCG      TCGTGTCGCGCACGG  77 225
   Bphy_0551  625044 ..  625072 +  -9.6  -3.54741   GATCGGCCGTGTAGC       CGACGCGCGTGAT GAGC AGCA-GCGCGTCG        TTTGGCGCGATGCTC  65 142
   Bphy_0553 NONE
   Bphy_0554  627624 ..  627639 +    -6  -3.58343   TGGATGCGCTGCGTT              CGCGCG CTGC CGGGCG               TTTCGCCGTCGTGCA  57 401
   Bphy_0563  638669 ..  638706 +  -8.3  -4.58213   TACGCGTCGCAGAGT   ACGCGAT-CGAGCGCCGC GTG GCGGCGCTGGTGTGGCGC   TTTTATACTTCGTTC  81 288
   Bphy_0565  641008 ..  641033 +  -8.9  -4.32649   GTATCGTGACGAAAC         CCCCGGCGAGT GCGA ACCTGTCGGGG          TTTCATTTTTGAGCT  82 61
        clpS NONE
   Bphy_0569  646140 ..  646165 + -16.2  -4.55798   CGAAGCACGAACGAA         CGGCGTGGGT GTCACA ACCCACGCCG          TTTTGCTTTGCCATC 100 54
   Bphy_0576  654460 ..  654473 +  -2.4  -2.65504   ACGCCGGGGAGGGCG               CATG AGACTG CATG                GATTTTTGATCGGAC  38 21
   Bphy_0577  655751 ..  655802 +  -6.3  -2.78384   GGCCGGACTTCGCGC GGTCCGGCCGGC-GCACGCCGCGT AAGCG GCGCGGCGCGCCGGCTGCTGGAAA TATCATGCAAAACCA  46 56
   Bphy_0578  657204 ..  657219 +  -2.4  -3.14132   CTGCTTCGACCTCGA              TGGGGC GTGT GCCCGG               TTGATGCAGCACAAC  43 67
   Bphy_0579  658600 ..  658627 + -14.2  -4.58395   AACTTTCGTTACGTC        ACAAAACCCCGC GTTG GCGGGGTTTTGC         TTTTTGGGCCGTCGG 100 60
   Bphy_0580 NONE
   Bphy_0581  660757 ..  660785 + -16.1   -4.8048   GCGGTTCAAGGAAAA        GGCCATCGACAGT CGC ACTGTCCATGGCC        TTTTTCATATGCAGC 100 53
   Bphy_0586 NONE
        ispH  665682 ..  665696 + -12.8   -5.7946   CCCTATCAAAAAAAA               CGCGCC GCC GGCGCG               TTTTTTTATTGCCCC 100 49
   Bphy_0588  667417 ..  667442 +    -9  -4.66163   GGACGTACAGCCTGA         CGGCACCG GACCATCCGA CGGTGCCG          TTTTTGCATCCGCGT  85 46
   Bphy_0589 NONE
   Bphy_0590 NONE
   Bphy_0591 NONE
   Bphy_0592  671338 ..  671362 +  -6.4  -5.80951   TCGCCTGCGAGCGAA          GGCTGCATGT GTCGA GCATGTGGCC          TTTTTTGTTTTGGGT 100 77
   Bphy_0595  673746 ..  673764 +  -3.1  -3.61398   CGCTCCCCAATAGAG             CGTCATC GGACG GGTGATG             TTCTTGAACACGGCA  51 405
   Bphy_0597  676009 ..  676042 + -13.9  -2.53263   CATTGCCACGCGCCC     TCGGCGAGTTCG-GCT GGC AGCGCGAGCCCGCCGA     TCCGTTCGCGGTGCA  70 455
   Bphy_0601  679645 ..  679671 + -14.5  -5.55855   GTTTGATGCAGTCGA        GCCGGATCAGCC GTGA GGC-GATCCGGC         TTTTGTTTTTTTCGG 100 61
   Bphy_0603 NONE
   Bphy_0604  682989 ..  683018 +  -4.7  -3.14931   ATCGTCGAAAAGTGA       CGCATGCGGGGCC GGGC GGCCGCGCCAGCA        TTGCTGACGCATCGC  48 26
   Bphy_0605  683934 ..  683959 + -14.7  -5.38951   GCCCAATATGAAAAA         GGCCCGCGG CAGGAAGA CCGCGGGCC          TTTTTTGTCTCAGTT 100 61
   Bphy_0610  687723 ..  687744 + -13.7   -4.8622   CCGTTTCCAGTAAAG           CGCCCGGACC GCT GG-CCGGGCG           TTTTTCGTTAACGGC 100 53
   Bphy_0612  688426 ..  688471 + -27.2  -4.36914   GCTGCGCGAGCCGGA CGAAAACGGCGCAATGTCGGC TCAAT GCCG-CATTGCGCCGTTTTCG TTTTGTCGACGCGAA 100 65
   Bphy_0615  692693 ..  692710 + -12.7  -4.77036   TCGGCAAAAATGAAA             GGGCACC TTAC GGTGCCC              TTTTTAATGGTCGGC 100 62
   Bphy_0624  701701 ..  701717 +  -7.9  -3.42366   TGTAGTTGTTGTTGT              CTGCGAC GCC GTCGCCG              TTCTCGCCTTTTCGC  62 36
   Bphy_0628  707924 ..  707934 +  -2.4  -3.57615   GGTGCAATGCATCCG                 CGCC TCT GCCG                 TTTCCGGCGTCTTCC  49 116
   Bphy_0629 NONE
   Bphy_0630  709784 ..  709796 +  -4.7  -3.37522   GCTAATTTTTCTTTG                GCGTG CTG CCCGC                TTCATTCGATGAGGT  49 36
   Bphy_0631  711043 ..  711070 + -12.8  -3.95219   GTTGGTTTCGAGAAA        GCCCCGAG-GGAT AAG ATTCGCTCGGGGC        TTTCTGGGCTTTGGG  86 61
   Bphy_0635 NONE
        lolA  717328 ..  717358 + -13.3  -2.80816   AATGCCTGTCACGCC       TGAAGGCCGGGCG ACGGA TGCGCGGCCTTCA       TATCGTCGATAAACG  73 40
   Bphy_0638  719453 ..  719476 +   -11  -5.38054   GAATCGTTTGGACAA          CGCCCGCAAT GTCC GTTGTGGGCG           TTTTTATTTCTCGCC 100 89
   Bphy_0639  721732 ..  721750 +  -3.1  -3.76224   GCTGCCGAGTGCACG             TCGGCGA ATGCA TTGTCGA             TTTCGTCGATCAGCA  54 466
   Bphy_0641  724261 ..  724280 +  -7.8  -2.53876   CCTCACCCGACAATG            CCGCCG GCCGGCCG CGGCGG             TGCGTTAAAATCGCC  52 54
   Bphy_0642  725869 ..  725910 + -23.3  -3.64912   ACCCTTTCCGCCAGA TGCAAACGAAAACAGGCCC TTCG GGGCCTGTTTTCGTTTGTG  TTGTCTATATCCATG 100 270
   Bphy_0643  726725 ..  726735 +    -4  -5.60993   ATGCGCGGTCACTAC                 TGAA AGG TTCA                 TTTTTTTCTGGCGCA  95 362
   Bphy_0644  728259 ..  728294 + -13.3  -2.65264   GCAGGCAGCGCGTGC    GCTGCGCAGGCGGCGT CATGA AC-CCGTCTGCGCCGC    TCGTCTACGTCGTCG  72 5
   Bphy_0645 NONE
   Bphy_0646  729530 ..  729545 +  -7.6  -3.86975   TCGCTGGACGCAGTA              TTGGAC CAAG GTCCAA               TTGTCTTTGACTTGT  69 108
   Bphy_0647 NONE
   Bphy_0648 NONE
   Bphy_0649 NONE
   Bphy_0650 NONE
   Bphy_0651 NONE
   Bphy_0652  739516 ..  739551 +  -9.6  -3.02511   ATGGATCCACGTCAG    GCACCTCGCGGCTGTT GGGG GACGGCCCCCGGGTGC     TGTTGGCGCGGTCGG  60 241
   Bphy_0653  740585 ..  740602 +  -9.1  -4.60041   TGCGGCGCCCCTTTC             CGGCACG TGCG TGTGCCG              TTTTTGCGCGTGCCT  85 98
   Bphy_0654  741352 ..  741390 +  -3.7   -4.9792   ACTTTTCCCGCTCTT  TGCCGATTGCTCCGCCCA GGAC TCGGCGC-GCACGCGGCA   TTTTTCTGTCGCGTG  77 100
   Bphy_0655  742337 ..  742351 +  -7.1  -2.87564   ACCTGATGCGTGCGC               CGCAC ACGCA GTGCG               TGTGTCGCGCGATGG  51 35
   Bphy_0656 NONE
   Bphy_0657  743540 ..  743579 +  -8.6   -2.9415   TTGTATCTCTTTTCG  CG-AGATGCGCGTCACC GTCGACA GGTGGCGCGTATCGACG  TGTCTGCGTCCTTTG  55 63
   Bphy_0658  744102 ..  744122 +  -8.2  -2.52464   GCATCGAACGGGCGG            TGCCGGCG CGTGT CGACGGCA            TCGCTTGCCGCCGGC  52 52
   Bphy_0659  744325 ..  744352 + -14.8  -5.44119   GACGATTGTGGGAGG        TCGGGCGCGTGC AGCC GAGCGCGCCCGA         TTTTTTTGCAATCGG 100 39
   Bphy_0661  747317 ..  747332 +  -3.2   -4.1891   GTGTTACCGCTGGCT              G-CCGCG ACG CGTGGGC              TTTCTCTTCGCCGCG  62 286
   Bphy_0668 NONE
         gmk NONE
   Bphy_0670  755679 ..  755712 +  -2.4   -3.5882   TCGGCGTGGAAATGC     TGAAGAAG-GTGCCT GTCTA AGGCACGCTTCAACG     TTTGAACGTCATGTA  49 6
   Bphy_0671  758208 ..  758218 +  -2.4  -3.74077   ACTGGTTGCACGAAG                 GCGC GCC GAGC                 TTTGCCTGTCTACAG  52 75
   Bphy_0672  758783 ..  758804 + -15.9  -3.18264   GCTAGAAAAGACAAA           GGGCCTTCC GGTT GGAAGGCCC            TTCATGAGTGGCGCG  85 76
        greB  759812 ..  759829 + -14.1  -4.77036   GGCACAAACGAAAAA             GGCGCCG CAAA CGGCGCC              TTTTTCATGCTGCGA 100 88
   Bphy_0676  762408 ..  762424 + -11.5   -5.4833   GGCTCCCAGGATAAA              CCCTCGC ATT GCGGGGG              TTTTTTATTGGCTGC 100 55
   Bphy_0677  763918 ..  763936 +  -8.1  -3.43961   GCACACATGCCCGAG            CGCCCGCG TCAG CGCG-GCG             TTATGGGTGTTGTCG  60 67
   Bphy_0680  765732 ..  765775 + -10.3  -3.22298   GCATCATTTCCGCTG CGCTGTC-CGCTCGCACGCCG CTCT CGGT-TGCGTGCGCGACAGGG TTCGTCGTCCATCCG  65 208
   Bphy_0683 NONE
   Bphy_0684  769717 ..  769737 + -13.3  -5.39681   AGCAGAAAACAAAAA            GCCCAGTCG CGA TGACTGGGC            TTTTTGTTTGATTCT 100 91
   Bphy_0687  774863 ..  774890 +   -17  -3.38072   TCGAGGGCAAAAAAA        CGGCCACATCGC GTGA GCGATGCGGCCG         TTGCTATTGGCTGCC  93 58
   Bphy_0689 NONE
   Bphy_0690 NONE
   Bphy_0691 NONE
   Bphy_0692 NONE
   Bphy_0693 NONE
   Bphy_0694 NONE
   Bphy_0695 NONE
   Bphy_0696 NONE
   Bphy_0697 NONE
   Bphy_0698 NONE
   Bphy_0699 NONE
   Bphy_0700 NONE
   Bphy_0701 NONE
   Bphy_0702 NONE
   Bphy_0703 NONE
   Bphy_0704 NONE
   Bphy_0705 NONE
   Bphy_0706  793337 ..  793369 +    -9  -2.66291   AACGCGGAAAGCCCA     AAGGCGGCG-GCGCG TATG CGCGCATGCCGCCCG      TCGTGTCAGTCTGTC  56 39
   Bphy_0708  795520 ..  795533 +  -3.7  -5.28983   GGGTGTTTTTGTCTG               CGACG CAAT CGCCG                TTTTTGTCTTTTCGC  84 47
   Bphy_0716  807766 ..  807777 +  -7.2  -2.87564   GTCTATTCGTTCACG                CGCG AAGA CGCG                 TCTGTCACACAGTCA  51 156
   Bphy_0717  809246 ..  809289 + -15.3  -3.54543   ATCTCGCTAACTTCT CGCCGAACGCGAGCGGG GCCGGCAACG CCCGCTCGCGTTCTGCA TTTCAGCGCATCCGT  90 40
   Bphy_0718  810296 ..  810326 + -23.4  -3.97368   ACGGCGCAAAGAATA       GGGCTGAGTCCGCG ATT CGTGGACTCAGCCC       TTTGTGCCTTCAGGC 100 70
   Bphy_0721  813938 ..  813957 +   -15  -4.58773   CGCTGTAGAACCAGA            CCCCCGCA CGTG TGCGGGGG             TTTTCATTTCATCGG 100 72
   Bphy_0723 NONE
   Bphy_0724  817549 ..  817575 +  -2.9  -2.84276   ACACTAGCGGACATG        TCCGAC-TGCGG AGGT CTGCATGACGGG         TGCTTCCTTCGACGT  40 116
   Bphy_0725  819621 ..  819633 +  -2.6  -3.96483   CGTCCATTGCGTGGC                CTCG TTTGC CGGG                TTATTTGCCTGAAGT  54 363
   Bphy_0730  825928 ..  825944 +  -9.3  -3.63336   ATCAACGCTGCGGAC              GCTGCGC CGC GCGCCGC              TTTGCGATACTCTCT  68 83
   Bphy_0731  826536 ..  826555 +  -4.8  -4.08216   TGGCCATACGGCGGT            GCACCCGC CCGA GCAGGCGC             TTTTGCCCGGCGTCG  64 281
   Bphy_0733  828654 ..  828678 + -11.4  -2.72649   CGGGACAACAAAAAA          CCCGCAGAGC TTGAC GCTGTGCGGG          CTTCTGTCCTGCGGT  65 466
   Bphy_0738  834712 ..  834728 +  -2.1  -2.80881   CTGATGCGCCGCTTG              CGCGGTG AAG CACCCAG              ATTAATTTCTCTTAG  39 102
   Bphy_0739  835473 ..  835512 + -21.6  -3.55815   TTTGAGCGTCAATGC  GATAATGGCCGTTTGCGC TTGC GCGCAGACGGCCATTTTC   TTTCAGGCGCTATTT 100 138
   Bphy_0740  836638 ..  836657 +  -2.8  -3.27774   TACATGAGGGAATTC            GAACAGCGC GGC GCG-TGATC            TTACTGGTTGCGGTG  44 8
   Bphy_0741  837798 ..  837822 +  -2.8  -2.71001   TCTCGGCTCGTATCC         GCGCGCCCGCTG ACA CA-CG-GCTCGC         ATTCGTTTCGCAATC  39 13
   Bphy_0742 NONE
   Bphy_0743 NONE
   Bphy_0744  841360 ..  841383 +  -2.2  -4.18018   CGCATTGCTAACCCG          TGCCGCCCGT TCCG ACGGACGACC           TTTTCGATGAAACCG  60 44
         cmk  842092 ..  842108 +  -2.3  -3.98627   AGGCGGAAGGATCCG              CATCAAA TGT TTTTATG              TTGTTGTGTTGGTGC  54 41
        rpsA NONE
        ihfB  844386 ..  844402 +  -7.9  -5.86965   TTGACCAAAAGAAAA              GCGCCTT TAA GGGGCGC              TTTTTTTTCGTCCGT 100 106
   Bphy_0748  844941 ..  844961 + -18.3  -3.31162   TCTAGCCCTCTAACG            CCGTGCGCC GCC GGCGCACGG            TCTCTTTCGTCCTCC  95 36
   Bphy_0749  846172 ..  846185 +  -5.9  -4.10161   AGTTGACGCGAGGCG               CGCGC AGGA GCGTG                TTTTGCAACGTAGTC  65 35
   Bphy_0750 NONE
   Bphy_0751  848624 ..  848659 + -12.6  -3.26471   CTCTTTCACTGATGC   CCG-CGCGCGCC-CGT TTCATC GCGTGGCGCGCGGCGG    TTCATCTGCGCATCC  74 29
   Bphy_0752  849727 ..  849751 + -10.7  -3.34715   CTACACTGGGGTCTC          CTGGTCGGTGA TCG TCACTGGCCGG          TGTTTCAGGGAGATC  68 58
   Bphy_0753  850270 ..  850296 + -10.8  -4.68424   TTCAGATGACTGGCT         CCCGCGGCAG ATCCAGC CTGCCGCGGC         TTTTTGCGTGCATTC  89 156
        cysM  851394 ..  851411 + -14.1   -4.8269   CCAGATAAAGACAAA             CGCCGGC ATCT GCCGGCG              TTTTTCATGGTTGTG 100 73
   Bphy_0756 NONE
   Bphy_0757  854782 ..  854792 +  -4.6  -3.52906   GCGCCGAAGTCGCGG                 CTGC CTT GCGG                 TTCTGTGAGCTTGTC  53 183
        metN NONE
   Bphy_0760 NONE
   Bphy_0761  858331 ..  858349 +  -7.4    -5.055   CCGAATTGGTAGCAA             CCCGGA CTTGGCC TCCGGG             TTTTTTCCGGATTAG  89 94
   Bphy_0762 NONE
   Bphy_0763  860261 ..  860290 +   -13  -5.63517   CGACACCGGCGGAAA       GAGGCGCTAGGAT GACGA ATCC-AGCGCCTC       TTTTTTCTTTGGGGG 100 68
   Bphy_0764  862133 ..  862156 + -18.2  -3.72695   CGGTGCATCGAACAA          CAACGGCGCC CGAG GGCGCCGTTG           TTTCGTCAACAAAAT 100 47
   Bphy_0766  864219 ..  864234 +    -4  -3.66844   CACTGTATATTTGTA              CAGTAT TCAA ATGCTG               TTCTTGACGTGTGCC  51 120
   Bphy_0767  865578 ..  865588 +  -6.8  -3.96148   GTATGCGCGTTGAAC                 TGGG CGT CCCA                 TTTGTCGTCGGGGCG  67 214
        rpsP  866565 ..  866620 +  -4.6  -3.63627   GTAAATTGCAGTTTC ACGGTGCATCTTCGGCTCGTGCGACA GTGG TTTTGCGCGAGTCTGGGATGTACAGG TTTGACGTATGCAGG  54 37
        rimM  867323 ..  867338 +  -3.2  -3.15579   CGAAGAAGATCATCG              TCGACT GGGA AGCCGA               TTACTAGAACATTCG  45 3
        trmD NONE
        rplS  868681 ..  868697 +  -9.4  -5.72622   AAGCTGTAAGAAAAA              GCACCC CTCGC GGGTGC              TTTTTTGTTTGTCAG 100 41
   Bphy_0773  869620 ..  869630 +  -2.4  -2.96157   GAACTCGAATAGCAC                 GGCG TCT CGCA                 TGACTTTTTTCTCCG  40 179
   Bphy_0774  870716 ..  870756 +  -6.8  -4.15222   CGCATCGCCAGCGCG GCGCATCGGCTGCCGGCCCG TTG CGGGCTG-C-GTCGATCAGC TTTCTTGCCAGCGCT  68 173
   Bphy_0778  873884 ..  873901 +  -8.3  -3.61398   AGGGTTCAGCTTTGC             CGCGGAG CGCG CACCGCG              TTCTTCGGCCGGAAC  64 39
   Bphy_0781  876727 ..  876740 +  -4.5  -4.18693   TTGTGAGCCTCTTTT               CGCTGG TAT CC-GCG               TTTCGTTTCTGGTTT  65 71
   Bphy_0787  884391 ..  884410 + -16.4  -4.13995   GTCATCGCGAATGAA            GCCCGGCC GGCT GGCCGGGC             TTTCCTTTCTGCAGC 100 75
        thyA  885573 ..  885597 +   -15   -4.4078   TCCCCGATGTGAAAA          CGCCCACTGC CATTC GCGGTGGGCG          TTTTCATTCGCGGGC 100 57
   Bphy_0791  889388 ..  889410 +  -9.1  -2.87463   TCACGCATCGGACAA          CGCGCGCTGC ACGG GC-GCGTGCG           TGTCTGGCAGAAATT  59 45
   Bphy_0792 NONE
   Bphy_0793  891892 ..  891913 +  -2.2  -2.79289   TGCGCTGAACTGGCC           GC-GCCGAT ACCAC AGCGGCAGC           CTTATTGCGCTCGTA  39 33
   Bphy_0794  892618 ..  892641 +  -4.5  -2.67017   CATGGCCGAGCGCCA          GCGCGGCCGC CTTCA GCG-TCGTGC          CTTCCTTGTGCGCTT  42 169
   Bphy_0799 NONE
   Bphy_0800  899102 ..  899119 + -14.1  -4.87803   CCGTTCGGCGCACCA             GCCCGGC ACGC GCCGGGC              TTTTCTTTGCGCGTA 100 75
   Bphy_0801  901441 ..  901461 +  -8.1  -3.52192   CGCGCCGCGATCGGG            CGGCGCCCG ATG CGCACGCCG            TTCTCTAAGGTTCCG  62 42
   Bphy_0808  907482 ..  907500 +  -5.3  -3.62096   TAATTCGCGCGTCAA            TGCGCTGT CAGC AC-GCGCA             TTTCGCATCGTCCAC  57 175
   Bphy_0809  908211 ..  908223 +  -3.3  -3.08032   GGCGCGTAAGGTCGA                GCCGT TGC AAGGC                TGCTTTTCGCGGACG  43 32
   Bphy_0810  909653 ..  909663 +  -3.2  -3.48004   TACCGTTGTTCATCG                 CGAC GTC GTTG                 ATTTTCTTCTAATGC  49 3
   Bphy_0811  910711 ..  910721 +  -3.2  -3.75718   GTGAGCGGGAAGGCG                 CGTT CAT GACG                 TTGGTTTTGATTGCG  54 17
   Bphy_0812  912216 ..  912244 + -20.4  -4.82901   GGCCAGACGTGAAAA        GGGCGCGTGATC GCGAG GATCACGCGCCC        TTTTTCTGGCCGAAG 100 41
   Bphy_0819 NONE
   Bphy_0820 NONE
   Bphy_0821  922524 ..  922539 +  -4.6  -3.54307   CGAAGCTGATCTGCG              TCCGGC GTCT GCCTGA               TTTCCCCGCAGTCTT  52 10
   Bphy_0822  923618 ..  923641 + -15.2  -3.15663   TGGGAGCCTGGGAGC          GGCGGCCGAC ATCT GGCGGCCGCC           TTCCTGGGCGTCAGT  82 48
   Bphy_0825  925920 ..  925945 +  -3.9  -3.10612   GTGGCTTAGCCACGT         GGCCTATGGCGG TTG CCG-CATCGGGC         TGTGTTAGAATTCGG  43 79
   Bphy_0826  926249 ..  926266 +  -8.4  -5.28176   CGGTTGATCAAAAAG             GCGGCA TTCAAC TGCCGC              TTTTTTGTGCCTGAA 100 115
   Bphy_0827 NONE
   Bphy_0828  928465 ..  928481 +  -6.5  -2.77043   GCCGTAGCGCACGCC              ATGCGTG CAT CACGCAC              ATTTGAACTCATCGA  50 75
   Bphy_0829 NONE
        fabG  930264 ..  930310 +  -8.1  -2.71712   TGTCGTAATCGAATT CGGTTACTATCCGCGCCGC-AAT GCC ATTCGCGGCGTGGACGG-AACGG CTTTACAGCAACCCA  53 33
        acpP  930922 ..  930963 + -17.4  -5.20781   TCGTCAGGTTAAACA GCCACAGG-GCACACAGGG CGCTT TCCTGTGCGCTCCTGTGGC TTTTGTTTTGTCATC 100 304
   Bphy_0832  932304 ..  932347 + -19.6  -3.12351   CCGCTCCCGCATTAA T-CGGCGGACCCTCGCAACGC ATT GCGCTGCGGCGGTCCGCCGCA TTGCATCTGGCGACC  90 94
   Bphy_0833  932719 ..  932758 + -10.7   -3.1247   GCTCGCCAGACGTGA GGCGCGCA-TC-TGACGGG ACGT CCCGGCGTGGCTGCGCGCC  TTGACTGTAAAGACT  64 13
   Bphy_0834  933456 ..  933467 +  -3.6  -3.01712   CACCCGAAGGCAAGC                GCTG GTAG CGGC                 TGTTGGACAGCGGCC  43 18
   Bphy_0835 NONE
   Bphy_0836 NONE
   Bphy_0837 NONE
   Bphy_0838  937163 ..  937191 +  -9.5   -4.7629   TTCACTTACTTACAA        GGCGTGCTCCG CAATCGT CCGAGCGCGCC        TTTTTCGCTTGATCG 100 139
   Bphy_0839 NONE
   Bphy_0840  939985 ..  940004 +  -5.6  -3.53012   CGTCGTGCATTCCAT            GCGGCGTG TTAT CACGCTAC             TTTAAGAACGCGCGG  55 89
   Bphy_0841 NONE
         era NONE
        recO NONE
   Bphy_0844 NONE
        acpS  944572 ..  944594 +  -5.5  -3.52849   CATGCGAGACGGGAC          GCGCGTC-AC AGGC GTCGCCGCGC           TCTTTCCTCTACTTC  55 46
   Bphy_0846  945678 ..  945702 + -12.2  -5.07652   AGTAGCAATAAGAAA         GGACGGGTCTC GATC GAG-CCCGTCC          TTTTGTTTTGCCGGC 100 53
        uvrC  952182 ..  952215 + -10.1  -3.44146   GCCCTGACGCCTGGG     CGCCCCACAGC-CGCG ATG CGCGCGCGCCGGGGCG     TTGCTTGTGGCGCGC  70 65
   Bphy_0852  953249 ..  953265 + -12.3  -5.34309   CGCTCCAAACACAGG              GGGAAGC CAA GCTTCCC              TTTTTGTTTGATGCT 100 401
   Bphy_0854  954091 ..  954116 +  -2.4  -3.96148   GATGAGGTTCGCGTG         CGAGCAGACG CCGTGA CGTCCGCCTG          TTTCTCCTCGCGCAG  57 81
   Bphy_0858  957225 ..  957268 +  -5.1  -3.61398   CCGAAATCGTCGCGG CGGCACGCAGCGCATGACC ACGACC GTTCATCCGCGCCGTGCCC TTGTTCAGCACGGAA  54 9
   Bphy_0859  958758 ..  958777 + -13.6   -5.4505   ACGCCGATTAAAAAA            GCCGCTTC GATC GAAGCGGC             TTTTTTGTTGCGGCC 100 53
   Bphy_0861  962505 ..  962549 + -20.8  -3.53343   GGTCTCTACGGATGT CGCCGCAACGCCCCGCATGT GTCCA ACATGCGGGGCGTTGTTGCA TTTGCGCCGCACCTT 100 74
   Bphy_0862  963557 ..  963584 +  -8.4  -3.08679   GCCAGGCCTGAGGTT        GTGAT-GGCGCGA CAC TCGCGCCTGTCCC        TCTTCGCTGCCCACC  56 30
   Bphy_0863  964439 ..  964449 +  -4.6  -3.18681   TGAGTCCGAGCGTCG                 CGGC AAC GTCG                 TTGATGCCGTTCACG  49 375
   Bphy_0870  970712 ..  970735 +  -2.4  -3.40051   AAATCGTAGAAATGA          TC-GCCAAGCC TCA GATTTGGCAGA          CTTTTTCACATCTTT  44 70
   Bphy_0871  972594 ..  972616 +  -5.5  -4.13654   GCCTGATTTCCAGAA           CGCCGTC CCGTCAAAT GGCGGCG           TTTCTCATTTCGGCC  65 111
   Bphy_0872  974419 ..  974465 +  -3.7  -4.66987   ACGGTCGGATAGACA GGTCGGCAACA-GGGTG-CTC GCCCAAG GAGTCTCCCGTGTTGCCGTCA TTTTCTTCCGCTCTG  70 443
   Bphy_0873 NONE
        carB  979049 ..  979064 +  -2.5  -3.53811   CTTAAGGTGTCAGAT              CG-GGC TTTGT GCCACG              TTTGCGCACCGTCGG  47 90
        greA  979614 ..  979645 +  -5.8  -3.06315   GTCCGCTATATCTGA      GGCGGGTGCCGTGTC TTC GATGCCGCATC-GCC      TGTTCCGCCTGTTGA  49 26
   Bphy_0876  980491 ..  980515 + -13.6  -3.53343   CTTCCTCTGCGGCTT         CGCGG-GCGCT GGGG AGCGCGCCGCG          TTTCGCGGCCGGCTT  81 383
   Bphy_0878  981776 ..  981796 +  -6.1  -2.87211   GCATCTGAAGCGGCC            TCGTTGAAC CGG GTGCAGCGA            TGTGTGAGCCCGCAT  48 19
   Bphy_0879  983880 ..  983907 + -22.8  -4.63479   GTTAAAGGTGTTTTA        CGGGCCGGTGTG ATTT CACACCGGCCCG         TTTTCATTTCTAATG 100 47
   Bphy_0880 NONE
        glmM  986324 ..  986342 + -13.1  -5.60993   GACAGAAGACGAAAA             GGGCGGC TTCAT GCCGCCC             TTTTTTTATGCCGCG 100 89
   Bphy_0882  987699 ..  987731 + -22.7  -2.82742   TTATTGGCTCGCGGC      CGGCCGCCCGGCTTC GAT GAGGCCCGGCGGCCG      TAGTTCTGGCCGCGT 100 77
        pstC NONE
        pstA NONE
        pstB NONE
   Bphy_0886 NONE
   Bphy_0887  992077 ..  992114 + -17.7  -3.59966   ACTGATCGAAAAACA   CGAAGCGCGCTGCGGGC ACTC GGACGCAGCGCGCTTTG    TTGTCTATGAAGTCT 100 46
   Bphy_0888  993513 ..  993524 +  -7.2  -5.93252   TTTTTGCCTGCGGCG                CGGC GTTT GCCG                 TTTTTTGTTTTTCCG 100 72
   Bphy_0890  997565 ..  997589 + -11.4  -3.75884   GTTTCTGGTTTGCTC          GTGTTGCCCC TGTGC GGGGCGGCAC          TTACTTTCTTTGCCG  80 97
   Bphy_0895 1001155 .. 1001174 +  -4.9  -3.18264   GGCAGGTAGGCTTGC            GCCGTCG CGCGCA CGGTGGC             TTGATCGGTCAGCCG  49 334
   Bphy_0901 1005856 .. 1005877 + -17.3  -5.01811   CAGCCTCCGCACGCA           GGCCCGCCT TCCA AGGCGGGCC            TTTTTGCTTTCATGA 100 94
   Bphy_0902 1006921 .. 1006944 + -11.6  -3.82202   ATCGGTTATAATCCC          GGGCCCGGCG TTGC TGCCGGGCCG           TTCTGTTTGCGCATC  80 53
   Bphy_0904 NONE
   Bphy_0905 1008767 .. 1008783 +  -4.4  -3.51825   CCGGCGGCGGGCCGA             GGCG-TC AGTC GAGCGCC              TTGTCGTTCGGATGC  52 47
   Bphy_0909 NONE
   Bphy_0910 1013929 .. 1013975 +   -31  -2.70932   GCGATAGAGGGACGA TTTAGGGGCGGCCGGGGCGCTT GCT GGGCGCCGCGGCCGCCCCTAAA TCATTGAAAACACGC 100 63
        rpsF NONE
   Bphy_0912 NONE
        rpsR 1015158 .. 1015172 +  -4.3  -3.29144   TCACAAGGAGCATCC               GAATG CAAAT CATTC               TTCTCGAAAAAGTCC  49 51
        rplI 1015663 .. 1015690 + -20.6  -5.55769   GTTCTGGCGATGAAG        GGCAGGGGCCGG GAAA CCGGCCTCTGCC         TTTTTTGTTCTGCGC 100 76
   Bphy_0915 1017318 .. 1017328 +  -5.4  -2.56596   CCATTTTCCGGGATC                 CCAA TGT TTGG                 TCGATTCATGCCCAC  46 171
   Bphy_0916 NONE
   Bphy_0917 1019036 .. 1019074 +  -5.9   -3.7795   CGCCCGTTACGTAGC  TCGCGCGGCGACTCGC CAGAAAAA GCGCGACGTC-CGCGA   TTTCCTCCGGTTTCG  60 104
   Bphy_0930 NONE
   Bphy_0931 NONE
   Bphy_0932 1037154 .. 1037170 +  -7.9  -4.86862   CGCGTTGATTTTTGT              CTGCGAC GCG GTCGCCG              TTTTGGTTTTTTGCG  91 33
   Bphy_0933 NONE
   Bphy_0934 NONE
   Bphy_0935 1039612 .. 1039625 +  -2.4  -3.73068   TTTGTTAAATCCCGA               TTGC TGAACC GCAA                TTGTTAAATTGGCGC  52 93
   Bphy_0937 NONE
   Bphy_0938 1043876 .. 1043899 + -15.4  -5.40072   GGATGAAAAGCAAAA          GGGCAACGAA GCGA TTCGTTGCCC           TTTTTTTCACGCACG 100 83
   Bphy_0943 NONE
   Bphy_0944 1054879 .. 1054893 +  -5.6  -4.49958   GATCCCGCTTTTTCC               GCTTGC GCG GCGGGC               TTTCTTTGCTGGCAT  74 175
   Bphy_0951 1064825 .. 1064841 +  -2.1  -2.71712   GGCGCCGAAGGCGGC              CAGAGCG CGG CCCACTG              ATTTCCGCGCGAGGC  39 8
   Bphy_0952 1065255 .. 1065298 + -13.3  -3.21099   GTTTTAATCGCGCAG CGTTGTGACGCGCGGTGCATG ACTG CATGC-CCGCGCGTTG-GACG TTCATCGTCGAACGG  78 34
        recR NONE
   Bphy_0954 NONE
   Bphy_0955 1068427 .. 1068438 +  -2.2  -3.75153   ACGCTGAAGGCGTAA                G-CGG CAG CCGGC                TTTGGATTCCACGAA  52 26
   Bphy_0956 NONE
   Bphy_0957 1070148 .. 1070178 + -24.1  -4.67038   ATGGCGGGTAACAAA       CGGCGCGTGGCCT CGCTA AGGCCACGCGCCG       TTTTGCTTTTCGGGG 100 50
        surE NONE
   Bphy_0960 NONE
   Bphy_0961 NONE
   Bphy_0962 NONE
   Bphy_0963 NONE
        rumA 1078585 .. 1078618 + -24.1  -3.72576   AGCGGGCGCCGCAAA     GAACAACGCCACGGT CGGC ACCGTGGCGTTGTTC      TTTGATGAAGAGCGA 100 80
   Bphy_0967 NONE
   Bphy_0968 1082089 .. 1082100 +  -5.8  -4.18018   CCTGCCTCTCAACCC                GTCC GCGA GGAC                 TTTTCGGTCAAAAGC  68 429
   Bphy_0969 1084113 .. 1084123 +  -2.4  -3.13164   AGCGCGAATAAGCGT                 CGCG CGG CGGG                 TTGGATGATTCGCGA  43 30
   Bphy_0970 1085474 .. 1085489 +  -6.1  -3.53012   GCGCTCGCAGTCGAG              CGTCC GTAAGA GGACG               TTTCACGAGGAGGCC  55 17
   Bphy_0971 1086461 .. 1086511 + -16.1  -3.93638   TGGTTCAGATGTTTC TGGCGGCGTCTTGCACGCGCAGC GTCAA GCTGTGCGTGCGACAGGACGCCG TTTCTGCGCTTCATT  95 90
   Bphy_0972 1087398 .. 1087422 +  -7.8  -3.54424   CCACGGCCCTCACTA         CGGGG-GCGCC GCTC GGTGCGCCTCG          TTTGCCGAGATGCCG  62 300
        rimO NONE
   Bphy_0974 NONE
   Bphy_0975 1091207 .. 1091235 + -11.5  -3.14463   TTTGATCCGCTCATC        CGGGACAGGGCGG CCG CCGCGCCGCCCCG        TTGCTGAACGAACTT  69 36
   Bphy_0976 NONE
   Bphy_0977 1093219 .. 1093240 + -17.3  -4.64766   AAGCACGAACAACAA           GCCCGCTCG ATAT CGAGCGGGC            TTTTTCACCTGTGCC 100 59
   Bphy_0979 1095608 .. 1095652 + -12.2  -3.27774   GCGCTGCCGCACACC GCATGCGCGA-CGTGCGTGGCG ACG CGCCACG-ACGCTTGGGCACGC TTGGTGCTTCGCATG  76 114
   Bphy_0980 NONE
   Bphy_0981 NONE
   Bphy_0982 1100002 .. 1100030 +  -9.4  -2.57026   AAGCGCCGTTGAGCG        CGGCGCGCGGGC ATTCA GCGCGCGTTCCG        GTTGCTATCGCTGTC  56 29
   Bphy_0984 1102163 .. 1102174 +  -2.2  -3.29461   AAGTTGGTGTTGACA                GGGT TTTG ATCC                 TTGTCCGCGGCGTTA  44 17
   Bphy_0985 1103316 .. 1103362 +   -10  -2.57244   CGCCGCTTCCCAACG CGTCGCGCCGAGCGCCAGCGCC ATGTC GACGC-GGT-CGCGGCGCGCCG TCAGTTCCTCCGTCA  58 412
   Bphy_0988 1107181 .. 1107212 + -22.4   -3.0094   AACCGCCCGCAAAAG      C-GCCACGGCCGCGA ATC TCGCGGCCGTGGCCG      TGTCTCTGCGTGAAC 100 96
   Bphy_0990 1109908 .. 1109936 +  -4.4  -2.62396   GCGGATGTGCAAACG        TGCGAGATGCCG TCAGC CGACACCCCGCA        TAATATCGGGCAGTG  43 68
   Bphy_0991 NONE
   Bphy_0992 1112784 .. 1112816 + -11.2  -3.73534   GGCGTGGGCGGCGGG     GCGGC-CGCTTCGGC GGGT GCCGGGGCGCGCAGC      TTGTTGATGAACTTG  77 209
        ispD NONE
        ispF 1122093 .. 1122113 +   -14  -4.58395   CCGCAGAAGCGACAA            CGCCACGC AGATC GCGTGGCG            TTTTTCACAAATCGA 100 72
   Bphy_1004 1126233 .. 1126251 +  -2.4  -2.87051   GTACAAGCGCTGACA            CCTG-GC TTCCGC GCGCAGG             GTTTCGTCATCGAAG  40 28
   Bphy_1005 1127486 .. 1127501 +  -6.8  -4.01603   GCCGCTCCCGCTCAT              GCGAGT GTGA GCTCGC               TTTAGTGTTTGCGTG  68 16
         tig 1133512 .. 1133548 + -21.6  -4.70659   ATAGCATCGCTGCAA    CGGCGTGCCGGCTGTC CGAAC GACGGCCCGCACGCCG    TTTTTGCATCTGCGC 100 40
        clpP 1134451 .. 1134461 +  -2.4  -4.11692   ACGCCTGCGGCAAAC                 GCCG TCA CAGC                 TTTTGCGCATCCGTC  57 137
        clpX 1135844 .. 1135867 + -13.2  -5.42514   GATTTTTGAAAAAAA          GCCGTTCATG GCGA CGTGAACGGC           TTTTTTCGTTTATCG 100 51
   Bphy_1013 1138468 .. 1138487 + -12.1   -5.7946   GGTAGCCATCAAAAA            CCCGCGG CTTTGC CCGCGGG             TTTTTTTGTTCACGC 100 74
   Bphy_1014 1139327 .. 1139344 + -11.3   -5.4505   CCAGTATCCTAGAAA             GGCGAAC TCCG GTTCGCC              TTTTTTATTGCCCGC 100 300
   Bphy_1015 1141389 .. 1141407 +   -16  -4.90778   CCGCCACAACAGAAA             GCCCCGCA AGT TGCGGGGC             TTTTGTTTCGCTGCC 100 77
   Bphy_1018 1143393 .. 1143415 + -19.2  -4.05788   TGCAGGCGAAAAAAA           CGGGCCTTCG TGA CGAAGGCCCG           TTTGGTTTCGAGCGC 100 59
   Bphy_1022 1152923 .. 1152943 + -10.3  -4.87626   TAAGGCTTTGTTTTT            CCGCCTGCG CGG CGCGAGCGG            TTTTTCGTGTTCGCG 100 38
   Bphy_1027 1158568 .. 1158585 +  -6.9  -3.05963   AATGAACGGTGAAAC             GGCGGAC AATG GTCCGCA              TGTTCCCATCCCGCT  52 129
   Bphy_1028 NONE
   Bphy_1029 NONE
   Bphy_1030 1162666 .. 1162719 + -18.4  -3.62597   ATACGCCTGCGATTC GCACGT-CGAG-GAAAGCCCGCGTAC GAAA GTGCGCGGGCTTTTTCTTGCGCGTGC TTGTTCGGGCGTCAA 100 40
   Bphy_1032 1164244 .. 1164265 +  -3.7  -3.55622   TTCGGATTCTGCACG           CGCAGCTTCA GGT TGAAGC-GCA           TTTCCAGGCCTTGAC  51 392
   Bphy_1034 1165612 .. 1165627 + -10.4  -3.07816   GGAAACGGGCGCATC              CACGGC GCGG GCCGTG               TTCCGTGCGTGCAAA  64 441
   Bphy_1036 1166470 .. 1166499 +  -2.7  -3.01712   CTTGAGCGCTCGCAG       TTCCAGCCACCGC ATTC GCGCTGGTTCGCA        TCTTCCGGAGACACA  41 36
   Bphy_1037 NONE
   Bphy_1038 1168448 .. 1168458 +  -2.4  -3.13371   TAACGGTTATCGCGA                 GCGC GCC GGGC                 TATGTTCGTGGCATC  43 38
   Bphy_1039 1169580 .. 1169605 +  -4.6   -4.1891   CCGTTGTCGTCGCTG         CGCTCGAGTG CCGACA CGCTCAGGCG          TTTGTGTTGCGCGAC  64 125
   Bphy_1042 NONE
         tmk NONE
   Bphy_1044 NONE
   Bphy_1045 NONE
   Bphy_1046 NONE
   Bphy_1047 1176531 .. 1176559 + -19.6  -4.61566   CGCTGTTCATGTCGA        CGCGCGCCGTGT GTTCA GCACGGCGCGCG        TTTTGTGCTTTCAGC 100 85
   Bphy_1048 NONE
   Bphy_1049 1178426 .. 1178439 +  -3.1  -2.78891   GAAACGAATGTTTCC               CGACTG TAA CAG-CG               TAATTCAATTGAAAT  41 9
   Bphy_1050 1179797 .. 1179826 + -20.1  -3.26545   TGCGCGCATAAAAGA       GGGCGACGCGATC CGAT GATTGCGTCGCCC        TTCGTCATCTATGCC  95 70
   Bphy_1054 1183038 .. 1183056 +  -4.5  -3.57144   CGTCCCGGTGAAATA             CCGCACT AACGA AGTGCGC             TTTCGCGATCCCGGC  54 453
   Bphy_1055 1184448 .. 1184463 +    -9  -2.72049   GCGAGATAACGACGA              TGGCGT GAAC ACGCCA               TCGTTCGACGCTGTG  57 32
   Bphy_1057 NONE
   Bphy_1058 1189741 .. 1189757 +  -2.1  -3.02144   AAGACCTCATCGACC              TGTACGG AGG CCGCCCA              TGTTCGCGAACGTGC  41 47
   Bphy_1059 NONE
   Bphy_1060 1191403 .. 1191435 +   -12  -3.05596   CGCTGATGCCTTCAT     CGACGTCTGCATCGG CATT CCGTTGCGGACG-CG      TTGCCTGAACCGCTG  68 35
   Bphy_1061 NONE
   Bphy_1062 NONE
   Bphy_1063 NONE
   Bphy_1064 NONE
   Bphy_1065 NONE
   Bphy_1066 1199916 .. 1199935 +   -15  -5.30616   GCGAAGTGACGAACG            GGACGGCC GCGA GGCCGTCC             TTTTTCTTTGGGTGG 100 64
   Bphy_1067 NONE
   Bphy_1068 1201948 .. 1201979 +  -3.7  -4.10453   TCATCCGGCACAGTT     GTTCGAGC-GACGTC TGCG GACGCCAGC-CGAGC      TTTTCACGCGCTTTG  62 149
   Bphy_1072 NONE
   Bphy_1073 NONE
   Bphy_1074 1211575 .. 1211602 + -19.2  -4.85782   ACCAGGAAGGAAAAA        GGCCGGTGCGAT CTGT ATCGCGCCGGCC         TTTCTTTTTGCCGCA 100 40
   Bphy_1076 1213297 .. 1213309 +  -3.3  -3.57144   CGGGTGCACACAAAG                CATCG CGT CGTTG                TTTCCGCATGCACCG  51 88
   Bphy_1077 1214475 .. 1214526 + -16.6  -3.65902   CACGACGAAGGGGAC CCGCTGGCCGACGATGCGCGAGCGA GTA TTGCGCGCACATCGTCG-TCGGTGG TTTCGCTGAAGTCGG 100 118
   Bphy_1080 1217165 .. 1217179 +  -5.6  -4.05446   GGCCCGCTGCGTGAC               GCGCAC CCA GTCCGC               TTTCTCCTTCGAGCC  65 27
   Bphy_1081 1219150 .. 1219165 +    -6  -4.09739   GCAATCCGCGCAGTA              CCAGGG TGTA CCCAGG               TTTTCCCCGCCTTAC  65 89
   Bphy_1082 1220603 .. 1220628 + -14.7  -5.00616   TTGCGTGAAGCAGGA         CAGGGCGCCGC AATT GCGGCGCTTTG          TTTTTTCGGGCACGC 100 107
   Bphy_1083 1221627 .. 1221648 +  -2.9  -4.08767   ACGTTCTGACTTGTA           GCGGCCA GATGATAA TGTCCGC            TTTTAGCCGCATAGA  57 140
   Bphy_1084 1223698 .. 1223714 +  -3.5  -2.98219   GGCTTCGCCGGTAGA              GGCGCCG CCA CGCAGCC              ATTTGTCGTCGAATT  42 512
   Bphy_1088 1228568 .. 1228588 +  -7.5  -3.10522   GTCCCTTTCGCTGCC            TGAATCGCG AAG CGCGGATCA            TCTGTTGACTAAGGT  52 78
   Bphy_1089 NONE
   Bphy_1090 1231580 .. 1231615 +  -6.8  -2.70932   GGTGCGGCATGCGAA    CCGGGCGTTCCACC ATGTAAGC GGTGGAACGCTCAA     TGCTTGCGGGCGCGG  50 57
   Bphy_1095 NONE
   Bphy_1096 1237574 .. 1237604 +  -7.5  -3.72592   CCGCCGTCGAGTCGG       GTGCGCATTCATC ATGTC GATGCGAGCGCAC       TTCTTCATCGCGATT  63 41
   Bphy_1097 1240775 .. 1240785 +  -8.2  -2.54371   CCCCACGTCATTCAG                 CGGC AGT GCCG                 TCAATTCGCGTAGTT  53 437
   Bphy_1102 1246214 .. 1246227 +  -3.7  -2.87132   CTCGTGCGAGACAGC               GCAGC AACG GCCGC                TGTGTGACCCGACGG  42 5
   Bphy_1105 1251086 .. 1251096 +  -4.6  -3.76125   CTCGAATCGCTTTGA                 CGTG CGC CGCG                 TTTGAGTTGACGTCG  57 26
   Bphy_1109 1255064 .. 1255100 + -11.5  -4.64766   TTGCGCGAACAAGAA    CAAGGAAACGGGCCTGG CAT TCAGGCCGGTTTCCCCG    TTTTTCCGCTCTCCG  95 78
   Bphy_1113 1260615 .. 1260636 +  -4.3  -4.69053   CCAGCGACACGGATG           CGTTCTGGC GGGC GCCGCAGCG            TTTTCTTCGGTACTG  73 212
   Bphy_1114 NONE
   Bphy_1115 1263781 .. 1263805 +  -2.1  -3.34043   CTTCTCGCAGCGAGC         GCGCACCGAA ATGGTC TTC-GAGCGC          TTCTGCCGTGATCGC  45 104
   Bphy_1118 1265511 .. 1265521 +  -5.4  -3.72241   CACCGTGCAGCCGGG                 CGAT TTC ATCG                 TTTAGATGCTTGATG  58 140
   Bphy_1130 1274490 .. 1274506 +  -7.9  -3.63744   GTCTGACGGGCAAGC              GAACGGC CAT GCCGCTC              TGTTTTCCGGCGCGG  64 35
   Bphy_1133 NONE
   Bphy_1134 NONE
   Bphy_1135 1278523 .. 1278551 +  -9.7  -2.71712   TCCTGGAACAGTTCG       GTTGCCACGTCG AACATG CGA-GTGGCAAC        GTTTGGCGCGGCAGG  56 437
   Bphy_1137 1279869 .. 1279879 +  -5.4  -3.14931   TTTGCGATACGAGCG                 CCAA TAC TTGG                 TTCATCGCGAGTCGC  50 129
   Bphy_1138 NONE
   Bphy_1139 NONE
   Bphy_1140 1282287 .. 1282297 +  -3.2  -3.31175   GATCGAGTGGGTGAT                 GTCG CAA TGAC                 CTTTTGTCGTGTCTG  47 16
   Bphy_1141 1283174 .. 1283220 + -10.8  -3.19026   CTCGCCCTCGCGAAT CCGTGCGACGGCGGGATGCCC CGGCTC GGGCCTCGCCCCGT-GTACGG TTCGGTCTTACGCTG  65 491
   Bphy_1143 NONE
   Bphy_1144 NONE
   Bphy_1145 1287032 .. 1287051 +  -4.3  -3.17571   AAGCTGGCTTAACCG            GCCAGACG TCCAT CGT-TGGC            TTCGGTTCCGGCATT  48 178
   Bphy_1146 1287698 .. 1287713 +  -4.6  -3.72576   ATCCGGGCTAGTCGT              CCGAGC AGAT GCTCGA               TTTGCTCAGCGAGCG  58 156
   Bphy_1159 NONE
   Bphy_1160 NONE
   Bphy_1161 1303404 .. 1303422 +  -7.3  -3.28712   GCAAAAGCCCATGAC             CCGCTCG ACGCC CGCGCGG             TTGTACCACGAGCGG  57 465
   Bphy_1165 1306717 .. 1306753 +   -13  -2.50443   CCCGACAGCGCGGCC   TGCGC-CGC-GCCCGGCG TCG CGTCGAGCAGCGAGCGCA   ATTGGTCGGATGTGA  67 234
   Bphy_1175 1323280 .. 1323324 + -10.5  -3.07344   GCGCCTGCACGACGC TGCGCGCCGTCTCCGCGTTGC GCA GCCACGCGTTGACGGTAGGCA TCTCTTCCGCCGTCA  63 359
   Bphy_1183 NONE
   Bphy_1184 1332530 .. 1332553 +    -8  -2.59564   GCACGGGATTCGCAC          TGTCTGGCGC AAGC GCGCCGGCCG           CTTATCCGATCCCAC  52 187
   Bphy_1185 1333023 .. 1333063 + -12.3  -3.57144   CGCCGGCGCATCGGC  GCGCTGGCGCGCTCGAGGC CGC GGCACACGCGCGCGAGCGC  TTTCGACATGGACGC  82 247
   Bphy_1188 1336182 .. 1336205 +  -5.2  -4.72272   GATGCTCTCGATCAG          CGCGTCCG GATTCACG CGGACGGG           TTTTTCGTCGGCGCC  80 432
   Bphy_1194 1340679 .. 1340698 +  -9.2   -3.4678   CCTGGATCAGTTCCT            GACGCACG TCTG CGCGCGTC             TTCTGCTGTGCGAAT  65 338
   Bphy_1201 1354814 .. 1354824 +  -2.4  -2.75064   GTCAACACTGATGCT                 CGCC CGT GCCG                 TCATTCGCTCGCGGC  39 30
   Bphy_1202 1356857 .. 1356871 + -11.4  -3.55824   CTGCTATGGCCCGAC               TGGCCG CAT CGGCCA               TATTTGTACATCATG  74 158
   Bphy_1203 1357565 .. 1357582 +  -9.1  -3.64703   TCGACGAATGGCAAA             CGGCATG CACG CGTGCCG              TTTGCGTCCGCGCGG  68 56
   Bphy_1204 1358875 .. 1358907 + -11.3  -2.54387   GTTCAAGGTTCGCGT     C-GACGCCGTGCGC GATGAA GCACACGGCGTCCG      TGCATTCGCGATTTC  64 189
   Bphy_1207 1359646 .. 1359688 + -10.4  -3.28497   GACGCGTGATCCTGA TCGCCTCGCGGCAGACGG CACATCA CCGGGAGCCACGAGGCGA TTGCGTTTCCGATGC  68 67
   Bphy_1210 1362136 .. 1362151 +  -8.2  -3.14931   TGGCGTCGCTCTGCC              GCGTGG GATG CCGCGC               TTCGTGCGGCATCAG  57 46
   Bphy_1211 1363947 .. 1363977 + -11.9  -5.21709   GACGGACGTTGTAAC      G-GGCCGGCCCGGCA CGC TGC-GGGCCGGCTTC      TTTTTTCCTGTCGCC 100 68
   Bphy_1212 NONE
   Bphy_1213 1365136 .. 1365163 +  -7.6  -3.23979   CGCGTGCATGCATCG        TCTCGACACGCG TTGG CGCGCGTCCAGG         TTCAATTAGTATTCG  57 41
   Bphy_1214 NONE
   Bphy_1215 1366363 .. 1366399 +  -8.6  -3.28745   ATCGAGCAAGGCGAC    CGCGCGGTCGAGGA GCTTCTCCG TCCACGGCCGCCCG    TTCCATTCTTCGAGC  59 85
   Bphy_1221 NONE
   Bphy_1222 1371909 .. 1371919 +  -8.2  -3.09327   CAAATAGCCTTGCCC                 GCGC CAT GCGC                 TATTCGGTGCGATAC  56 34
   Bphy_1224 1372553 .. 1372578 +  -2.5  -4.26871   ACACGGCGCATTGTC         TGCCTC-TCGCT CGC AGCGAAGCCGCA         TTTATTGCTGAATTA  60 125
   Bphy_1225 1373748 .. 1373768 + -11.1  -2.60194   TACTTCATGATCGCG            CGTCAGGCG CGA CGCCTCACG            GTTCGTTGCGCAGAT  64 99
   Bphy_1230 1381616 .. 1381641 +  -3.1  -3.79906   TCGACGCGTAAGACA         CGGCATGGCCCG TCA CGAGC-GCGCCG         TTGTTCTGCGCATCG  54 503
   Bphy_1238 1392107 .. 1392122 +    -9  -2.84634   AGCCGGCTGATGCCT              TCGAGC AGCG GCTCGA               TATGATGCTGTAGCA  55 441
   Bphy_1242 1395000 .. 1395033 +  -8.9  -3.67052   AAGACCAGCACGACG     TCCTGCGCCG-TCG ACGGCAC CGAGCGGCGCATGA     TTGTCTTCAGCGTGT  65 463
   Bphy_1246 1398229 .. 1398250 + -17.3  -5.24531   ACAGCTTCCGCACGA           CGCCTGCCG TCAC CGGCAGGCG            TTTTTTCTCGAGCAT 100 58
   Bphy_1247 1398864 .. 1398891 + -13.4  -3.36273   GCTCCACCGTGACTT        CGCGTGGCACGGC CTT GCCG-GCCGCGTG        TTCCTCTTCCAGCGA  77 86
   Bphy_1256 1407610 .. 1407628 + -13.1  -4.64846   ACCTCACTCAGACAA             GCCCCGC CGCGT GCGGGGC             TTTTGTGCTTTCTGC 100 47
   Bphy_1257 1408523 .. 1408550 + -14.8  -2.71712   CGCACCGCCCTCGCC        GCGGCGCGCACCC GAA GGGA-CGCGCCGC        CTTTCAAACCGCCGC  77 54
   Bphy_1258 NONE
   Bphy_1259 1411912 .. 1411930 +  -2.3  -3.92869   ACCGCCTGCCCCACG             CCGGGTT AACGC GACCCGC             TTTCTACATACGTGA  54 53
   Bphy_1260 1412477 .. 1412494 +  -5.5  -3.05596   ATGACGGCGCGAATG             TTGCGCG ACAA TGCGCGA              TTCGATGGGCGGATC  49 37
   Bphy_1261 NONE
   Bphy_1262 1413719 .. 1413749 +  -3.1  -2.52464   AACGTTCAAGACGGC      G-GCCTGCGCGCGT CACT ACACTCGCCGGCAC       TGACTTCAACGAAAG  40 63
   Bphy_1263 1414531 .. 1414541 +  -8.2  -3.66288   TCGCTTCCATTTCCT                 CGCG CGT CGCG                 TTCTCTTCGAAGATG  65 409
   Bphy_1265 NONE
   Bphy_1266 NONE
   Bphy_1267 1421094 .. 1421121 +   -17  -3.35046   GACTGCACAAAAAAA        CGCGCCCGTGAT GTCC ACCACGGGCGCG         TGTTTGCCGGCGTCG  93 298
   Bphy_1269 1424985 .. 1424999 +  -9.2  -2.80443   CGCGTAGATGCGCCA               CGGCGC ATC GCGTCG               TATCGTCGGCTATCC  57 34
   Bphy_1270 NONE
   Bphy_1271 1427557 .. 1427574 + -12.7  -4.72986   GGCGACAAACGCGAA             GGGCTCC TCAC GGAGCCC              TTTTTCATGCGCGTC 100 69
   Bphy_1273 1430125 .. 1430138 +  -3.1  -3.54488   AGGATTCGTGCAGAT               CATGG GCTC TCATG                TGTTCTTTCACGGCA  49 216
   Bphy_1275 1432067 .. 1432106 +  -2.6  -3.34455   GCCCGATTATCTTGA  TGAAAAAAGCCGGCGTCC TGGC GGGCGCCAGCCATCTGCA   TTGAATTTCTCGTCG  44 49
   Bphy_1280 1438133 .. 1438147 +  -2.1  -3.32756   CAACAAACAGAGCAC               CGGAA GCCCA TTTCG               CTTTTCGTTTACCAT  44 76
   Bphy_1281 1438456 .. 1438514 + -28.7  -3.14344   TTCGATCGGTTACCT -GGATGTGCAATGAAAAACGCCGGCTCTT GAC GAG-GCCGGCGTTTTTCATTGCACATCCG TTCATGCAAACGATG 100 79
   Bphy_1287 1445308 .. 1445336 + -17.5  -3.32844   ACGCGCATGAAAAAA        GCTGCATCCGATG TAA CACCGGATGCAGC        TTCTGACGTGCCCAC  93 107
   Bphy_1292 1451574 .. 1451605 + -10.9  -4.39989   GCACAGGCACTACTG      TGCA-GGCGGCGGT CTCGA ACCGCCGCTTTGCG      TTTTAGTGCTTTGCT  93 42
   Bphy_1294 1454021 .. 1454044 +  -6.6  -3.55563   CGAACCGGTCTCGTG          TGCACGATCG TGCG CGTGCGTGCA           TTTCGCAGATGACAT  58 43
   Bphy_1295 1455463 .. 1455489 + -10.1  -5.76633   TCGGTTCTTCACGGT        CGGGCTGTTCGC GAAT GCGG-CGGCCCG         TTTTTTTCTGTCTAC 100 64
   Bphy_1307 1465559 .. 1465580 +  -7.2  -3.72968   CACTGTTACGCGAGC           CGCGCGTC AATAAC GACGCACG            TTTCCCTATACTCGT  63 104
   Bphy_1308 1466625 .. 1466649 +  -8.5  -3.65046   TCATTCACTTCGGCG          CGTTCCGCACA CCC TGTGCGCGGCG          TTGTTCGCGTGGGGC  64 362
   Bphy_1309 1467985 .. 1467996 +  -2.2  -3.28712   ACGCGACCGCCCACG                CAGT TGTC GCTG                 TTGTAACGCACCGCG  44 8
   Bphy_1310 NONE
   Bphy_1311 1470073 .. 1470088 + -11.8  -3.63744   ACCGGCAATGAAAAA              GGGCGC CGCA GCGCCC               TCTTTTCAACCCGGC  77 43
   Bphy_1315 1475505 .. 1475529 + -14.3   -3.8901   GCGGCACGAAGAAAA          GGCGCACCG CGTGATA CGGTGCGCC          TTTCGTCGTTTGGCA  93 70
        smpB 1477255 .. 1477273 + -10.3  -3.21668   TTCTGGATCGCCGCC             TCGCGTC CCCCC GACGCGA             TATTGATCTGCTCCT  65 371
   Bphy_1322 1482216 .. 1482226 +  -3.2  -3.14132   GCGCCCTTGCCACGC                 TGCT GCC GGCA                 TTGCTCGAACAGACA  43 82
   Bphy_1339 NONE
   Bphy_1340 NONE
   Bphy_1341 1504174 .. 1504189 + -11.8  -4.84311   TTATGCAAACAAAAA              GCCCGC ATCC GCGGGC               TTTTCTTATATCGAA 100 59
   Bphy_1344 1507944 .. 1507974 +  -3.8  -3.91897   AGCCCAAACTGAAAA       CCACCTGAAGCAAC GAC GGTGCATCAGGCAG       TTTATGGGTGGAAGC  56 92
   Bphy_1348 1515743 .. 1515777 +  -2.7  -2.79492   CCCAGGCGCACACTT    CAGG-GAGCGCCGCCGC AGC GCTGCGCC-CTCACCCG    CTTTCCGATTCCAAC  39 47
        dapD NONE
   Bphy_1350 1517056 .. 1517077 + -13.7  -5.05782   CCGTACCTATGTTGT           TGCCGGCCT TCCT GGGCCGGCA            TTTTTTCACCTGAGT 100 67
   Bphy_1351 NONE
   Bphy_1352 1519175 .. 1519218 + -25.4  -4.07568   CGGCTGATGGCTGCC TCGCACGACGCACGGTGCCT GTCT GGGCACCGTGCGTCGTGTGC TTTTGGGCGCCCGCA 100 51
         cls 1521222 .. 1521232 +  -8.2  -3.17051   CCAGCACCTGCAGCC                 CGCG CGC CGCG                 TATTGCTCGTGCAGC  57 346
   Bphy_1355 1523508 .. 1523533 +  -3.9  -2.68719   CCGGGAAGCAAGGCC         GCGCCAGCAATC GTG GAGGGCTGG-GC         ATTGTCGTCTACTGC  40 70
   Bphy_1356 1524667 .. 1524677 +  -8.2  -3.22298   CGCGGCAAGGTCTGC                 CGGG GCT CCCG                 TTCGTCGTCGATCAA  57 84
   Bphy_1360 1529135 .. 1529159 + -11.3  -2.75294   TCTCTTCGCAATCTT          CTGTGCGCGCA GCA TGCGCGCCCCG          CTTTGCAGGCTTTGC  65 64
   Bphy_1361 1530429 .. 1530466 +  -9.8  -3.16683   CCTTTGACGAACATC   TGCGCATCCCACGGTC CGCGAT GACCGAGCGATGCGAA    TTCCTCGCGTGCGCT  60 472
   Bphy_1366 1534116 .. 1534126 +  -6.8  -2.50545   CGATACAGCTTCTAA                 CGAG AAA CTCG                 CCTTTATTGTCGCGA  48 336
   Bphy_1367 1535953 .. 1535970 + -12.7  -5.81412   ACTGAATCAGGAAGA             CCGACGC TTCG GCGTCGG              TTTTTTTTGCCTCGC 100 58
   Bphy_1368 1537669 .. 1537696 + -14.8  -4.65933   CCTTCGTTTCGGAAA        ACGCGCGCCAGT GATC GCTGGCGCGCGG         TTTGTTTTGGGGCTA 100 109
   Bphy_1371 NONE
   Bphy_1372 1541990 .. 1542024 + -18.6  -5.00616   CGGTTGACCGACCGG     GATGGCCTGGCGGGCG TCA TGCCTGCTGGGCCATC     TTTTTTGGGCGACCC 100 123
   Bphy_1375 1544393 .. 1544406 +  -3.1  -3.31144   TCCGTTCGCCGTCCA               CTTCG AGAA TGAAG                TTCTCCGACTCGCGC  47 376
   Bphy_1378 1548408 .. 1548431 + -18.2   -4.4078   AAGCAGTACGTAAAA          GGCCCGCTTC GAAC GAAGCGGGCC           TTTTGCTTGAAACGG 100 55
   Bphy_1384 1556024 .. 1556036 + -10.5  -5.37593   TGCGCGCAACAAAAA                CCGCC CCG GGCGG                TTTTTTGCTTTGCGC 100 79
   Bphy_1391 1565011 .. 1565024 +  -3.7  -4.36931   ATGCTTTCGGGCTGC               GCGCC GGCC GACGC                TTTTCATCTGAGTTC  65 53
   Bphy_1392 NONE
   Bphy_1393 1566265 .. 1566316 +  -6.7  -3.53444   GATGACGTCATCATC GAAAAGGCCGTCGTGGTTGAGTAA GAACA TTACTCGACCGAAA-GGCCTATTC TTTAAGAAGCGCTGA  58 2
   Bphy_1394 1567328 .. 1567357 +  -7.1  -3.76402   GCAGCGCTTCGAGAC       TCG-CGCCGAGC CGCTCAA GCGCGGCGACGA       TTTCGTCGATGCGCT  62 198
   Bphy_1397 1570308 .. 1570321 +  -9.5  -5.72622   TGTTCGGTCTCGAAA               GCGGC TCCG GCCGC                TTTTTTCTTTATGAG 100 46
   Bphy_1398 1571758 .. 1571775 +  -6.9  -3.05596   ACATCGCGACGGCAG             GCTGGCC ATCC GGCCAGG              TTCGCTCGACGCGTC  52 66
   Bphy_1399 1574503 .. 1574551 +  -5.2  -3.01712   CTGGCCAAGTCGCCA G-ATGCGCCGCGCTGACACGCG CACGAAC CGCGAGCCGGCGCGCCG-ATGC TGTTCGAGCGGCGCA  46 11
   Bphy_1400 1576018 .. 1576029 +  -5.8   -4.1891   GAGCGGATGATTGCC                GTCG AGCA CGAC                 TTTGTCTTCCGCGAC  66 310
   Bphy_1402 1577826 .. 1577846 +  -3.2  -3.64471   ACCAGCGGCCCAGGT            CGGTGTTG GAGCA CATTACCG            GTTTTATTTTGCGCT  51 188
   Bphy_1406 1584731 .. 1584746 +  -8.2  -3.46399   TATTGCGGGATTGAC              GCGCTG GCAG CGGCGC               TATGTTTTCGGTTTG  62 48
   Bphy_1424 1605520 .. 1605558 + -27.7  -4.72272   GTGGCCGGCCAAAAA   CAGAAACGCCCGTGACG CGCCA CGTCACGGGCGTTTCTG   TTTTTGCTCCAGCGA 100 78
   Bphy_1435 1615326 .. 1615347 + -10.1  -2.71712   CCGCACGGCGCACCA           CGCGCGG CTTTCCCA CCGCGCG            GTTTCGACCGAGGAA  61 48
   Bphy_1436 1616327 .. 1616366 + -10.7  -2.83409   TCACTGACGCAGCCC CCGCGTCGCCCCGTCTCGC TTTG GCGCAAC--GGCGACGCGG  TATCATCGGTTAGTG  61 34
   Bphy_1437 1616872 .. 1616895 + -18.2  -3.71848   CTCGCCAAAACAAAA          GGCGCGGTTC GCAT GAACCGCGCC           TTGTTCGTAAGGCCG 100 71
   Bphy_1447 NONE
   Bphy_1448 1631159 .. 1631192 + -13.7  -4.41348   GTTTTGCTGTTGGTC     GGCTGGCGTTGCCCC GTGC GGGGCGGCACCTGCC      TTTCTTTGCCGCCGC 100 149
   Bphy_1449 1632841 .. 1632869 +  -8.7   -5.0133   TCTAAGGGCAGCGCA        CCCGGCGCGGC ACATTCC GCCGCGCCGCA        TTTTTTCACCGCCTG 100 36
        lysS 1634645 .. 1634675 +  -7.5  -5.08824   ACTCGCCGAAGCCCG      GTGC-C-GGCGCGGC TTA GCCGCTCCCGTGCGC      TTTTTTGCGTGAACA  89 194
   Bphy_1451 1635584 .. 1635613 + -19.5  -4.60487   TTTGAGCCGCAAGAA       GAAAGGCGACTTC CTCG GAAGTCGCCTTTC        TTTTTCAAGCTGCTG 100 48
   Bphy_1462 1643450 .. 1643479 +   -18  -3.64703   GATCCGGAAGACAAA       GAGGCTGCATCG GGCGAG CGATGCAGCCTC        TTTCAATAGCAGCGA 100 77
   Bphy_1465 1646730 .. 1646758 +   -14  -4.26903   GCCACGCAATAAATG       C-AAGAAGCCCCG CATG CGGGGCTTCTTAG        TTTTCGTCGGGTACG 100 53
   Bphy_1467 1649496 .. 1649513 +  -8.3  -5.40072   AACAGCGTATCGTTT             CCCCGGC TCAG GCCGGGA              TTTTTTTGCCCGCCC 100 218
   Bphy_1471 NONE
   Bphy_1472 1660168 .. 1660193 +  -3.1  -4.48987   AACACAGCGCCGCAG         CCGCTGCGC-GC AAC GCAGCACGGAGG         TTTTCATTGTGAAAC  68 344
   Bphy_1473 NONE
   Bphy_1474 1662675 .. 1662685 +  -8.2  -3.55444   TGCGGCGCGGTTTTC                 GCGC AGT GCGC                 TTTCCGGCATGCGAC  62 184
   Bphy_1475 1663779 .. 1663826 +  -9.2  -3.14344   GGCTTCCTCACAGCC TTCGC-TCGC-CGCCCGGATCG CGAACA CGATCCGGGCGCGCCATGTGCA TTCATCCGCACGCTC  61 79
   Bphy_1476 1666352 .. 1666378 +  -8.6  -4.41494   TTCGGGCACACGCGA         AGCGGGCTCGGT TTT ACCGAACTCGCC         TTTTCATTCGCGATG  77 112
   Bphy_1478 1668943 .. 1668975 + -22.8   -3.9941   GGCAGCAAAGACAAA      GCGGCTCGATGGCG CATCA CGCCGTCGAGCCGC      TTTCGTTGTGCCACA 100 46
   Bphy_1482 1674239 .. 1674268 + -16.5  -3.94877   GATACGTCTCGAACC       GGCGGCGCACG-CA GCA TGTCGTGTGCCGCC       TTGTTATTGAACCGT  95 87
   Bphy_1487 1680750 .. 1680783 +  -2.9  -4.56597   AGCGTGCATGTCGGC     GTACGCGGCGGCGAA CGGC TTGGCCTGCGCGAGC      TTTTTGAGGACGGCC  69 475
   Bphy_1489 1686204 .. 1686216 +  -4.7  -3.14522   GAGCGCGCACAATAA                CGCCG CGA CGCCG                TTACATATCGATTAC  48 39
   Bphy_1490 1686557 .. 1686575 + -11.7  -5.58454   CTCGAATCCCAACCA             TCCGCGC TCGAT GCGCGGA             TTTTTTTCGTGTGCA 100 61
   Bphy_1491 1688764 .. 1688785 + -12.3  -5.26316   CGCACAGGACTGAAA           CGGGTCAGC TTCG GCTGATCCG            TTTTTTATGGCGTCA 100 56
   Bphy_1499 1694506 .. 1694553 +  -7.6  -3.04322   CTAACCGACGCCTTC CGCGGTGTCGATCT-GACCAGCC CCA GGTCGATCGAGGGCGGCACCGTG TGTTGAACCATTGGG  56 316
   Bphy_1500 NONE
   Bphy_1501 1697378 .. 1697399 +  -2.3  -4.14243   GAGCAGTATCTGCAG           GTGATG-CAT TGA ACGACATCAC           TTTTCCGCTGCGCTG  57 14
   Bphy_1502 NONE
   Bphy_1503 NONE
   Bphy_1504 1700214 .. 1700226 +  -3.3  -3.15768   CCTAGTTTTTTACGT                CGACG GCG CGTGG                TCTTCCGATTTTGAT  45 36
   Bphy_1505 NONE
   Bphy_1506 1702964 .. 1702982 +    -8  -2.63596   CAGCAGTACACGCAG             CGGCGCGC GGC GGGCGTCG             TCGTGTGCGGTGGCG  50 481
   Bphy_1512 1706711 .. 1706722 +  -7.2   -3.6692   CGTCTCCGACAGCAT                CGCG GCAA CGCG                 TCTTTTACCATGAAA  60 96
   Bphy_1513 1707076 .. 1707098 + -14.8   -4.8048   CATCACGTACTGCAA           GCCGCCGCGT CTG ACGCAGCGGC           TTTTTCATGTCGACG 100 73
   Bphy_1515 NONE
   Bphy_1517 1711998 .. 1712012 +  -9.2  -3.35679   TGTGTGCGCTGCTAA               CGCGGG GGT CCTGCG               TTGTGCGTCGCCGGG  63 276
   Bphy_1518 1714189 .. 1714212 +   -11  -5.08011   TGCCCGGAAAGCGAA          GCCCGCCA GTTGTTCA TGGCGGGC           TTTTTTGCGCGTTTT 100 60
   Bphy_1519 1714801 .. 1714839 + -14.6   -3.5882   ACGCCGAAGGGAGAT  GGGCAGAGTCCGGCGCG CACGTA CGCGCCGGACA-TGTCC   TTTACGGGTGATCTC  90 185
   Bphy_1520 1715648 .. 1715692 + -12.9  -3.65812   GCATTGAACGATCGG GCAAGGCGCGCGGTTCGTCGC CCGAT GCTACGAACCG-GCGCCC-GC TTCTATTCCCGCAAC  82 34
   Bphy_1521 1717599 .. 1717613 +  -8.5  -3.86733   TAAACCGCATCCCCG               CCGGC CGGTT GCCGG               TTCTTGCTATTTCAT  69 117
   Bphy_1522 1718820 .. 1718831 +  -2.2  -4.16842   TGTTTTGCGGCTGAG                GGTC CGTC GATC                 TTTGTTCGACCTGAA  60 205
   Bphy_1524 NONE
   Bphy_1525 1722898 .. 1722929 +   -13  -3.54741   GGTCTTCCTACGAAC      GCTGGCGTGCTATC CCGA GACACCACGCCAGC       TTTCCAGCCGTGATC  79 73
   Bphy_1537 1737503 .. 1737528 +  -6.2  -3.17075   GATGCAGACGTCCTT        CGCGCT-TGAGC CTCT GC-CATAGCGCG         TTCCATTCGAGGCCA  49 68
   Bphy_1542 NONE
   Bphy_1543 NONE
   Bphy_1544 1746453 .. 1746469 +  -2.9   -4.4009   CGAGCATTGTGCTGC              GCATCGC CTG GTCATGC              TTTTCTCAGCTCACG  63 194
   Bphy_1545 NONE
   Bphy_1546 1749109 .. 1749135 + -18.8  -4.26076   GAACGATGAGCAAAA         GCCCGTATCGTC GTC GACGGTACGGGC         TTTTCCTACGCGTCA 100 54
   Bphy_1550 1758168 .. 1758193 + -13.4  -5.29782   CCGCGCAGTTAAAAA         GGACTTACGG CTTTCA CCGTAAGTCC          TTTTTTGTCCATCTG 100 146
   Bphy_1564 1772838 .. 1772848 +  -3.2  -2.90573   TGCTGCAGCGTCTGC                 TCGG GAA CTGA                 CTTTCGTCTGGATGG  42 15
   Bphy_1567 1776202 .. 1776220 +   -16  -4.68593   GAGTTCGACAAAAAA             CGCCGCTC GAC GAGCGGCG             TTTTTGCGTCATGGC 100 39
   Bphy_1572 NONE
   Bphy_1573 NONE
   Bphy_1574 1784928 .. 1784940 +  -4.7  -4.26076   GACCAGCAGAAAACG                CGGAC GGT GGCCG                TTTTCGTCGAGCTGC  68 335
   Bphy_1576 NONE
   Bphy_1577 1787185 .. 1787196 +  -5.8  -2.82623   GAAAACGGGCCAGCT                GACG GCGC CGTC                 TGATTGTCCGCCGCG  46 11
   Bphy_1578 1788729 .. 1788739 +  -5.4  -3.14132   GAATCCCGGCAAGGT                 GCTA CGC TAGC                 TTGATACGAAACCGA  50 16
   Bphy_1579 1789949 .. 1789964 + -10.4  -3.38046   CTGTTTTACGGATAT              CGTGCC ACCG GGCACG               TATTTCAAGTCCGCG  68 354
   Bphy_1582 NONE
   Bphy_1583 NONE
   Bphy_1584 NONE
   Bphy_1585 1795928 .. 1795940 +  -3.3  -5.36441   GTACTGTGGTTGTTA                CGCCA TCC TGACG                TTTTTTGTCTGCGAC  85 15
   Bphy_1587 1799464 .. 1799476 +  -4.7  -3.73056   TTTTTGCCTGCGGCG                CAGGG TTG CCCGG                TTGTGGTTTTGGTTT  57 43
        prpE 1801786 .. 1801798 +  -4.7  -3.44051   AACGGTCCGCACGAT                CGCGC ACG GCACG                TTGTACTCGTAACAG  53 191
        valS NONE
   Bphy_1592 1808973 .. 1808992 + -11.4  -4.81249   GCGTGAAGTTGAGAA            GCCGTCGC GTCT GTGACGGC             TTTTTCAATTTGGGG 100 85
   Bphy_1597 1813794 .. 1813813 +  -7.1  -4.37886   AGCATCGCGCGACCC            CGGCG-GC CCTTT GCACGCCG            TTTTGTGCAGAATCG  74 82
   Bphy_1598 NONE
   Bphy_1599 NONE
   Bphy_1600 NONE
   Bphy_1601 NONE
   Bphy_1602 NONE
   Bphy_1603 1821934 .. 1821979 +  -5.9  -4.88217   AGTTAGGTTTTTTTG CCTGCGACGCC-AGTCGCCGGT ATT GCCTGCGGCGCGGCGTTGCCTG TTTTGGTTTTTTGCT  84 35
   Bphy_1612 1831750 .. 1831776 +  -7.9  -4.33182   GATATAAACAAAAAA         AGCCGCAAGTC CTATC GACTCGCGGCC         TTCTTTTATGCATAA  77 71
   Bphy_1614 1836098 .. 1836118 + -11.1  -3.64822   CGCGAGCGCGTCAGT            CGCTCGTGT CGC GCACGGGCG            TTTCGCTCACGCCAT  77 135
   Bphy_1617 NONE
   Bphy_1618 1840240 .. 1840263 +  -4.5  -3.30159   GTCGTCAGCTTGCCG          TTGCGGC-GG AAATA CCAGCCGCGG          TTCTGCCCGCCTTGC  49 327
   Bphy_1620 1842851 .. 1842870 + -12.2  -3.15544   CTTCACCGGGATGGG            TGCGCTTC GCAC GAAGCGCA             TTCGTCCGCGTCACG  74 56
   Bphy_1621 NONE
   Bphy_1622 1844926 .. 1844945 +  -6.4  -3.80516   TGGTTTGGTTTCTCG            TCTGCGAC GCCA GTCGCAAA             TTTCATCGCTTCATT  63 242
   Bphy_1630 1853742 .. 1853754 +  -5.5   -2.7127   TCGCGGTCGGTCTGA                TCCGG CCG TCGGA                ATTCTAATTAGCTGA  46 6
   Bphy_1631 1854127 .. 1854137 +  -8.2  -2.75535   GTTGGCAAAGCAAGC                 GGCG TAA CGCC                 TGCTTGCAATCTTCG  53 19
   Bphy_1632 1855056 .. 1855074 +  -5.3  -2.80935   AGATCGACGTGCAGC            TCGC-TCG CCAG CGACGCGA             TCTCGTCGATCGGGT  45 210
   Bphy_1634 NONE
   Bphy_1635 1857401 .. 1857459 + -12.3  -2.76671   GCTTCGCCGGCGCAT GATGCGC-TAAGGGCGCCGCAGCGCAGT CTGT GCTGCACGGCGGCGCCCTCGGGCAGATC CTTTCAGATCACTCT  69 16
   Bphy_1639 1862126 .. 1862148 +    -2   -2.9732   AGCGGGCATCGGCGG           GAACGG ACCTGAGTTTG CCGTTC           TACTTTGGATTGCGA  40 14
   Bphy_1640 1862468 .. 1862493 + -11.9   -3.1637   AGTGCCAAAACAAAA         CGGCATTGCGA TTGC TCACAATGCCG          TTGCTGGAAATATCT  69 103
   Bphy_1642 1864642 .. 1864669 + -17.8  -4.67607   TGCAGGTGTCGTGCA        GCCGGATGTTCC CCAC GGAGCATCCGGC         TTTATTTCTTCGGCG 100 362
   Bphy_1645 1866198 .. 1866208 +  -3.2  -3.53224   CACCCCGCAACACGT                 GTTC TTC GAGC                 TTTGCAAAAGACGTC  49 479
   Bphy_1650 1869554 .. 1869569 +  -3.3  -5.47399   GTCTATGGACCGCGC              TCGTT GTTTTG AACGA               TTTTTTTGAGCTTAG  88 146
   Bphy_1651 1870347 .. 1870359 +  -5.5  -3.57039   GATTCGCGCAAAGCG                CCAGT GCG GCTGG                TTGTCCTTGTCGATG  57 199
   Bphy_1654 1873762 .. 1873776 +  -8.5  -4.00038   GACAGGCGGCCGACG               GCCCG ATCGG CGGGC               TTTATGGTACTCGTA  71 437
   Bphy_1657 1874617 .. 1874632 +    -6  -3.07935   TCGCGACCGAGCGAC              GCGCGG TCTA CGGCGC               TTCGCTCAGTCGCCT  49 63
   Bphy_1658 1875449 .. 1875464 +    -9  -2.82516   ATGCGCTATGCCTTC              GCAAGC GCGA GCTTGC               TGTAGTCATGGCCGA  57 405
   Bphy_1661 NONE
         aat NONE
   Bphy_1663 1878819 .. 1878835 +  -8.7  -4.77757   TCGCCGCGCTGCCGA              CCCGTTA AAA TAGCGGG              TTTTCATTTTTCAGC 100 88
   Bphy_1664 1880089 .. 1880102 +  -9.5   -2.8001   AAAGAAACCGAAATA               GCGCG AATC CGCGC                TATCGTCGCGATTGT  58 213
   Bphy_1668 1883935 .. 1883947 +  -3.3  -3.08032   CAAAACCAGACGTTT                TGCGG CAC CGGCA                TGCTTTTCGCGCGAC  43 160
   Bphy_1669 NONE
   Bphy_1670 NONE
   Bphy_1671 1886343 .. 1886359 +  -2.1  -4.22652   GCAGGCGGCGAGCAC              GCATCGC CAT GCACTGC              TTTTGCCTGCTGTGG  60 416
   Bphy_1672 NONE
   Bphy_1673 NONE
   Bphy_1674 NONE
   Bphy_1675 1901509 .. 1901519 +  -8.2  -2.72344   TTGCCCGTCGCTCAC                 CGCG AAG CGCG                 TGGTTGAGGATACCC  53 117
   Bphy_1685 1915929 .. 1915940 +  -7.2  -3.49475   GATCCGCTCATGGCA                CGCC GGTT GGCG                 TTCTATGCCAGTGCC  58 39
   Bphy_1686 1918164 .. 1918176 +  -6.2  -2.89564   CCAGATAGCCAGATT                CCCG ACTGA CGGG                TATCTGCAATCGACG  48 33
   Bphy_1688 1921362 .. 1921384 +  -6.9  -3.26947   GACGTAGCACCGCAA          CC-GGGCCGC ATCT GCGCCCCAGG           TTGATCTGAGCGTTA  54 254
   Bphy_1695 1930835 .. 1930850 +  -2.5  -2.71745   GTGGATGCCAGCGCA              TAGGC CAACGC GCCTG               CTTACTTCTTGACAG  39 147
   Bphy_1698 1936681 .. 1936708 + -11.2   -4.8048   GCTGCCGTAGAAAAA        GGCTGCTGCCGT TCAT GCGGAAGCGGCC         TTTTTCGTGTCCGCC 100 52
   Bphy_1699 NONE
        fadE NONE
        fabG NONE
   Bphy_1702 NONE
   Bphy_1703 NONE
   Bphy_1704 1946432 .. 1946470 + -10.8  -3.15544   TCGTGAGCGCGAACG   CGACGGCCGTGCGTCGCG GCT CGCAGCGTGCGTGCGTCG   TTCGTGCAGCTGGCG  65 79
   Bphy_1711 1952091 .. 1952130 +  -2.1  -3.81951   CAAGATCTTCGACGT GCGTCGCCGTGCCCGTC-CG GTC CGCGACAGGCA-GACG-TGC TTTCGTCCTATGCCA  52 450
   Bphy_1713 NONE
   Bphy_1714 1952781 .. 1952811 +  -7.5   -2.9155   TGCGACTGTGCCTTC      TGCTGCGCGAGAGC GGCA GCTTCCGCGC-GCG       TCTGCTGTTGCAGGC  54 165
   Bphy_1716 1954441 .. 1954471 + -11.1  -5.54338   GCCTGACGTAAAAAA       GCCGGCCTGGC AGTCACTTC GCGAGGCCGGC       TTTTTATTTTCATTA 100 92
   Bphy_1723 NONE
   Bphy_1724 NONE
   Bphy_1725 NONE
   Bphy_1726 1969923 .. 1969963 + -14.8  -2.52516   CGCCGACGAGACAAT GCGACAGCCTGCACCCGGTT TGC ACCCGGG-GC-GGCTGTTGC CTTCCTCGTGAGACG  76 274
   Bphy_1736 1983291 .. 1983321 + -16.1  -4.56597   TGACCATGCACTCTA      CGCTTCCGGGCGCC CAAG GGCGCCCGGC-GCG       TTTTTGAGGCCGGCA 100 38
   Bphy_1737 1984073 .. 1984095 + -13.5  -5.53991   AAGTAATTCCGGTAT           GCCCGTATC CTCGC GATACGGGC           TTTTTTTCGTCCATG 100 160
   Bphy_1739 NONE
   Bphy_1741 1986171 .. 1986211 +   -17  -3.53091   CGGGTGCGGACAGGG  CAAACAAGCCGAAGCCGT TCAAT ACGGCCTCGGCTTTTTTG  TTTGCGCCAGCGGAT 100 65
   Bphy_1742 1986633 .. 1986657 + -11.4  -3.30474   ACGCGCGTTATCCGG          GGCCCGGC CGCCATATT GCCGGGCC          TTGCTGCTTCTGGAG  72 49
   Bphy_1744 1988776 .. 1988786 +  -8.2  -3.29947   CGAGCCGCGCCAGCG                 CCGC CGC GCGG                 TTCATCTCCTGGGTC  59 204
   Bphy_1746 1990318 .. 1990333 + -11.8  -3.29471   GGCACGGCGCACCTG              CGCGGC CATC GCCGCG               TTCATGTGATCGACG  71 487
   Bphy_1750 2001909 .. 2001925 +  -6.5  -3.53012   GTCCGACTGTGCAAC              GCCGC GTGATCA GCGGC              TTTCGGCGACGACGG  58 351
   Bphy_1753 2003198 .. 2003225 + -14.1  -4.48987   CCGCATCAAATGAAG        GGGCGTCTCGC CTGGCC GCGTGACGCCC         TTTTCATTGTCGAAA 100 58
   Bphy_1758 2008593 .. 2008603 +  -2.4  -3.30124   TCGTCCTGCTGGGCA                 CGCG CAT CGAG                 TTGTGACGCATCCGA  44 9
   Bphy_1759 2009439 .. 2009457 + -13.8  -2.73124   CGTCTGCACCCCGGG             CGGCGCGG GCG CCGTGCCG             ATTTCGACGATGCCC  71 414
   Bphy_1761 2012507 .. 2012521 + -12.8  -3.45118   GATCGGCCCCCGCCA               CCGGCG AGC CGCCGG               TTCCTTATACGATCG  79 124
   Bphy_1762 2013177 .. 2013197 + -11.8  -2.96692   TCATGGCTCAGCGTT            GCCGCGCG CGTAT CGCGTGGC            TGTATCATCGTCGTC  66 129
   Bphy_1763 NONE
   Bphy_1764 2014180 .. 2014220 +  -9.8  -3.34192   TTGTCTTCGTCAATT GCGGACGCCGATGCAGA CTTCGTGC TCTTCA-CGGCGTTCGC  TTGCTTCGGCGGCTT  64 344
   Bphy_1768 2016906 .. 2016939 + -20.4  -3.51708   TTCCTAGACGCTCAT     GC-CGGCGGCCGTCA CTTTC TGACGGCCGCCGCGC     TTCGTTTGGCCGGTG 100 86
   Bphy_1769 2018363 .. 2018373 +  -2.4  -3.14931   AAAGTGCCCACGCAT                 CGCG CGA CGGG                 TTCGTGACACATCGC  43 71
   Bphy_1771 NONE
   Bphy_1772 2023342 .. 2023352 +  -2.4  -3.53012   GCGTCCACCCGCCAC                 CGAC GCT GACG                 TTTGAGAAAGAGGCC  47 10
   Bphy_1773 2026811 .. 2026823 +  -7.7  -3.75897   GCAGACGCCACTCAG                GATGC GCC GCATC                TTTCACTTCCAGCTT  65 151
   Bphy_1777 NONE
   Bphy_1778 2033061 .. 2033086 +  -4.6  -3.08679   AAACGCTTTGATGCC         CGGCGCG-GGC TGAAC GCCATGCGCCC         TCTTCCGTCGACCGC  46 30
   Bphy_1792 2048560 .. 2048574 +  -2.7  -3.11812   GCCCGCGAGGCGGCT               GCGCG TAATC CGCAC               TTGCATGATGTCGAT  42 215
   Bphy_1795 2052078 .. 2052106 +  -8.7  -3.05596   CGCTTGACAGGCACG        CCGCAGGCGAAGG CAA CGCTCGCCTGCGC        TTGCGTCACCCGCTA  60 34
        glgC 2055030 .. 2055065 +   -11  -3.53012   TGCCCGGCACGGCAG    GCGCCGTGCGCGCGGCG GCA CGTTGCGCGCCCA-CGC    TTTGGCAAGGCCCAC  74 77
        glgA 2056625 .. 2056658 +  -7.3  -3.76224   AGCTGGTGTGAGCTC     GCGCGCGCTC-GATCC TCC GCGTCATGGCGCGCGC     TTTGATGGGTCGGCG  63 30
   Bphy_1799 2058099 .. 2058121 + -13.4  -4.26903   ACGTCCTATAATGCC           TGCCGCGCGA ACT TTGCGCGGCG           TTTTAATGGCATGGG 100 363
   Bphy_1800 2058653 .. 2058665 +  -4.8   -3.4243   TGTTGCGCTCTTTCA                CCGA CATCC TCGG                TCTTGGTTTTGAGTG  52 57
   Bphy_1803 2062492 .. 2062504 +  -9.1  -2.76046   GCCATGCCGGACAGC                GCCGT CGC ACGGC                TCATCTTCGGCTTGG  56 274
   Bphy_1806 2066337 .. 2066389 + -11.2  -3.61398   CGACCTCGTCTTCAG GACGGCGCTGCGGTTGCT-G-GCCGA AGA TCGGCTCCGGCGGACGCAGCACCGAC TTCTTGCGAACGGGA  74 358
   Bphy_1816 2076608 .. 2076631 +  -3.1  -4.09117   GCGCAAAACGTTGGC          CAGCGCACGC CGTAA GC-TCCGCTG          TTGTTTATCCGTAAG  59 56
   Bphy_1817 2076968 .. 2076979 +  -7.2  -3.34398   CCTTCGTGACAGCAG                GCGC CCGC GCGC                 TGTTTGCCCGCCGCC  55 87
   Bphy_1822 NONE
   Bphy_1823 2082857 .. 2082869 +  -4.7   -5.4505   CGGGTTGCCTGCGGG                GCGGC GTT GCCGG                TTTTTTCTTCGCGGG  90 67
   Bphy_1826 2087397 .. 2087407 +  -6.8  -3.76379   GATGGCATCGGGATC                 GGCA CGC TGCC                 TTTGATGCCCTGTTC  62 206
   Bphy_1828 2089818 .. 2089840 +  -9.8  -2.71712   CGCGTGGCGCCAGCC           GTCAGTCGAG AAA CTCGGCGGAC           CTTTGGCGCAGCGCG  61 62
   Bphy_1830 2091710 .. 2091727 +  -5.5  -3.36289   TTCGCGATCGTTCTC             CGGTACG TCGT CGTAGCG              TTGATTCGACTGGTC  53 311
   Bphy_1840 NONE
   Bphy_1841 2107610 .. 2107642 +  -7.6  -3.53012   GGGTGTTGCTCCATG     CCGTGACGGC-GGCG CCTG TGTCTGCCGACGCGG      TTTCCGCGCCCGAGG  62 207
   Bphy_1842 2107912 .. 2107962 + -12.5  -2.71924   GGGACGCGCGCTGGG CCGCGCGTTCGCTTGCAATCGCTC TGGC GGCCGGTT-CAGGCGCCCGCGCGG ATTTCGAGCACGCTC  69 70
   Bphy_1846 NONE
   Bphy_1847 2111983 .. 2112004 +  -5.8  -3.06302   GCTCCGCACGTTCCG           CTGCAACG CCGTTA CGATGCAG            TTCGGTGAAGCTCGT  49 388
   Bphy_1849 2115559 .. 2115573 +  -2.7  -3.02511   ACATCACCGGGTCGG               GCGCG TGGAT CGCGA               TATTGCCGGGCTCGC  41 518
   Bphy_1851 2117714 .. 2117734 + -12.5   -3.1085   TGTCGTGCCAGATGG            CGCCGCGGA TGG TGCGCGGCG            TGTTCCGTCAATTGA  72 512
   Bphy_1853 2118962 .. 2118973 +  -5.8  -4.25104   CAGTCCAGCAGCAAT                CACG AGCA CGTG                 TTTTCATGCAGCAAC  68 444
   Bphy_1855 2120839 .. 2120849 +  -2.6   -3.5032   ACAGTCCTTGCTTGT                 TTAA ACA TTAA                 TGTTTAATATAAACA  47 55
   Bphy_1856 2121070 .. 2121083 +  -9.5  -3.86015   TCTGAAGTGAAGGGA               GCCCC GAAC GGGGC                TTTCTCCGCACCGTC  73 31
   Bphy_1857 2121865 .. 2121905 +   -12  -4.07687   CAAAACCTGCAGTTA  CAGTCCGTAGCCTGTG TTCACGACT TACAGGCTGTGGACTG  TTTTCACGCGGGAAT  84 354
   Bphy_1865 NONE
   Bphy_1866 2126433 .. 2126450 +  -2.7  -2.77901   GACGTCACGACAGTG             GAACTCA AGGT TAAGTTC              TAACTTTCTGTTATT  39 5
   Bphy_1867 2128121 .. 2128133 + -10.5  -3.35996   AGTTGGGAGTCCCGC                CGCGC TAG GCGCG                TTCTGAATCGACGTG  67 447
   Bphy_1911 2159701 .. 2159714 +  -9.5  -5.99154   ACCAAGACGACCAAA               CCCGC TATG GCGGG                TTTTTTTGTTTCATC 100 52
   Bphy_1912 2160406 .. 2160421 +  -4.6  -3.06302   ACCGCCGCTGAATAC              CAACGC TGCA GCGTGG               TTCGCTGCACCTGAT  46 121
   Bphy_1913 NONE
   Bphy_1914 2161894 .. 2161916 +  -5.4  -4.65895   CCGAGCCAGCGCTTT           GAGGGTGCGG TCC CGGCCCTCTC           TTTTTGAATCGAAGG  76 60
   Bphy_1915 NONE
   Bphy_1916 NONE
   Bphy_1917 2165379 .. 2165390 +  -7.2  -2.68434   GAAAAGCAACTTGCC                GGCG TCGC CGCC                 TGATCTGATCTAACC  49 11
   Bphy_1918 NONE
   Bphy_1919 2166613 .. 2166637 +  -4.2  -3.14132   GCCAGCGACAAGGAG          GGAGCGTGAA GCTGA TTCTCGATCC          TTGCTGCGGCAGCCG  48 17
   Bphy_1920 NONE
   Bphy_1921 NONE
   Bphy_1922 2168223 .. 2168245 +  -3.4  -4.27886   ATGAGCTTAAAGGCC           TCGATGGATA CCG TGATCATCGA           TTTGTATGTTTCCAG  64 325
   Bphy_1924 2169350 .. 2169372 +  -9.1  -3.56092   GAATCTTCTCGGCAT           GCGTCTGGA ATATG TCCAGCCGC           TTTGCAAAGTGCTCA  68 168
   Bphy_1926 NONE
   Bphy_1927 2171138 .. 2171164 +  -7.2  -5.42198   AGATTCAATGACAAA         GCCCCGTAATTC AAT GATTTGCGGGGA         TTTTGTTTTTTCGAC  95 222
   Bphy_1939 2185342 .. 2185392 + -12.5  -3.01791   CCAGCCTCAAGGCGC GGCGCGTGCCGCCCGTGGC-GTC CTAGCTT GCCGGCCAAGCGCGGC-CGCGCC TGTTCGCGCCGCGCT  72 0
   Bphy_1940 NONE
   Bphy_1941 2187848 .. 2187869 +   -13  -5.95946   TGTTTGTTTAGCGAA           GCCGGGAC GTGATA GTCCCGGC            TTTTTTTATTGTTCG 100 47
   Bphy_1942 2188534 .. 2188565 + -12.3  -4.84914   ACTTCTGCGGTCCGA      TCCGCGCAACGTT CCAGGC AGCGCTGCGCGGA       TTTTCTTATATGGCT 100 83
   Bphy_1943 2189484 .. 2189520 +  -4.1  -4.25104   GATCCCCACGCCGCC    TGACGCCGCCTGCCCGC AAA GCCGGCTTGATGCGTCG    TTTTGATGCACAAGC  62 23
   Bphy_1944 2189991 .. 2190028 +  -6.9  -5.38054   CTTCCCGCGTTTGAA   C-GTAGCGTCCGAAATGG CGC CCGTCTCGGGCGCCGCAG   TTTTTCTTTGTGCCG  95 56
   Bphy_1945 NONE
   Bphy_1946 NONE
   Bphy_1947 2192207 .. 2192230 + -15.4  -5.14563   GGGTTCAAAGTAAAA          GGCCTTCATC GTCG GATGAAGGCC           TTTTTTCATGCGCAC 100 81
   Bphy_1949 2194585 .. 2194620 +   -19  -2.53876   TTCACAATAGCGATT    CGA-GCCGCGCGGCGCG TTC TGCGCCGCGCGGCATCA    TCCGTTCCAATCCAA  88 102
   Bphy_1950 NONE
   Bphy_1951 2195593 .. 2195616 + -12.4  -2.71246   TTGCATTAAGTCCTG          CGCTGCCTGA CTCC TCGGGCGGCG           TCACTTTCCTTGCCT  69 32
   Bphy_1952 2196215 .. 2196242 + -13.5  -4.89567   AACGATAGAAACGAA        GCCGTGCAGGT CCAGCC ATCTGCACGGC         TTTTGTCTTTTGCGA 100 231
   Bphy_1959 2204086 .. 2204104 + -11.7   -5.1861   TGCTGGAACGAAGAA             GGCGCTC CTTAT GAGCGCC             TTTTTTCGTGCTGCG 100 75
   Bphy_1962 2207382 .. 2207395 +  -2.3  -3.93695   GGAGAAGATCGAAGC               GATCG TCGG CGACC                TTTATCAGTGATGGC  54 1
   Bphy_1963 2208496 .. 2208515 +  -2.8  -4.06678   ACCTGGCCTGTTCGG            CTGCTTTG CGCG CAAAGTCG             TTTGTGTAAGTCGCT  57 53
   Bphy_1968 NONE
   Bphy_1969 2212813 .. 2212825 +  -7.7  -3.28712   CTGAACGGCGGCAAC                GGACA GCA TGTCC                TTGTCGGGCACAGCC  57 491
   Bphy_1974 2226366 .. 2226384 + -13.1  -5.61596   TCTGTATCGAATCAG             GCCCCGC CGCGC GCGGGGC             TTTTTTTATGGCACT 100 57
   Bphy_1975 2227433 .. 2227444 +  -4.4  -3.10164   TCGAAAGGAATCTGA                TGTC AATC GACA                 TTAAATCATCGCTGG  46 44
   Bphy_1976 2228210 .. 2228241 + -10.2  -3.17319   CGTGCATAGAGCAAC      GAC-ATGGACCTGGC TCT GCCGGGTTCGTAGTC      TCTTCATGCGTTCGC  65 53
   Bphy_1977 2229113 .. 2229141 + -11.7  -4.63184   CGCATGATCAACAAA        ACGAGGCCACG CATTCCA CGTGGCCTCGC        TTTTTCGCATACCTT  95 80
   Bphy_1980 NONE
   Bphy_1981 2233015 .. 2233063 + -11.9  -2.52676   CGCGTCTCTGATATG GCGCGCGCGATGTTGCGAACGAGC CCGG GTTC-TTCGC--CATCGCGCGCGA TGCGTTGCAGCGCTG  64 30
   Bphy_1983 NONE
   Bphy_1984 NONE
   Bphy_1985 NONE
   Bphy_1986 2238108 .. 2238120 +  -4.8  -3.05384   TTGCGTGGCGCTATG                CGCA GAAAG TGCG                TTGAGTGAACGCGCG  46 9
   Bphy_1987 2239508 .. 2239518 +  -3.2  -4.02334   TTGTTGTTTGCGACG                 CTGG GTG TCAG                 TTTCTGGTCTCGCTG  59 97
   Bphy_1988 2240301 .. 2240325 +  -6.3  -3.06183   GCGAAGCACTGAACA          TCGGCATCGCA TGG TGCGAAGTCGC          TTCGATGCACCTAGA  49 29
   Bphy_2016 2268204 .. 2268217 +  -9.5  -5.24129   CGACGACGATAAAAA               CCCGC CATT GCGGG                TTTTTTATCGCGGCC 100 105
   Bphy_2023 NONE
   Bphy_2024 NONE
   Bphy_2025 NONE
   Bphy_2026 2278219 .. 2278229 +  -8.2  -4.81851   TGCCGCGCGTCGATG                 CCGG TTT CCGG                 TTTTTCGCTTTCACT  91 77
   Bphy_2027 NONE
   Bphy_2028 2280840 .. 2280854 +    -7  -2.64218   AGATGCACGAAGACG               GCGCGC CGC GCTCGC               GTTATGCTGGAGAGT  49 196
   Bphy_2029 2281436 .. 2281452 +  -4.3  -2.69246   CCTTAGCGGTTTTGA              GTTCGTC TGC GACGGCC              TGGTGTCGGTTTGTG  43 35
   Bphy_2030 NONE
   Bphy_2031 NONE
   Bphy_2032 2283757 .. 2283805 + -10.2  -4.55887   TCTTCCCTCTTCCTT CCCCGCAGAATGCACGGCGCTTC GTCA GAAGCGGCGTGCGT-CAGCGCGC TTTCTCTTTTTCGCG  89 49
   Bphy_2033 2286368 .. 2286378 +  -2.4  -3.14132   AGCGGCGTCGCCCGC                 CACG CGT CGAG                 TTCATGCGCGAGCGC  42 457
   Bphy_2044 NONE
   Bphy_2045 2295670 .. 2295688 +  -4.4  -4.36914   CCCCATTGAATCCTG             CCCGCCGC CGG GTGGTGAG             TTTTGTGGCCAGAGG  68 355
   Bphy_2046 NONE
   Bphy_2047 NONE
   Bphy_2048 2298411 .. 2298430 +  -6.4  -3.05384   AGGCGCTCGCGCAGC            GGC-TCGGG CAA CCCGACGTC            TTCCATCGCCCACGC  51 350
         upp 2315400 .. 2315418 +  -3.1  -5.40072   TAAGGTTTGCACCAT            CGG-GACG CGGG CGTTGCCG             TTTTTTTGGGGGGCG  85 38
   Bphy_2064 2316707 .. 2316744 +  -7.5  -4.87626   CGAAGGTAAAGATGG   ACATCCACGGCTCGCGC CAGT GCGCGGGCCGTTCACGG    TTTTTAGTATTCGGG  88 252
   Bphy_2065 2318038 .. 2318052 +  -4.9   -3.0976   GGCCAACCGCAAGCA               CGGCT AAGCC GGCCG               TCTTCGCATATTGGC  46 19
   Bphy_2066 2319223 .. 2319243 +  -2.5  -3.53224   TGACTTTCTCGTGCA            GCGCG AGTGGGTCTGA CGCGC            TTTGCCGCGCCGCTC  47 10
   Bphy_2067 NONE
   Bphy_2068 2320455 .. 2320487 +  -6.2  -2.87132   CAAGGCGCCCGCTCG     CCGCCGCTCGTG-AG CACG CTGTTCGAGCCGCGG      TATGTGCGCGCGGCC  48 13
   Bphy_2069 2321110 .. 2321141 + -10.8  -3.11339   GTTACGCTCAACACC      TGTCGTCGGCTTCGC GCT GCGAGGCCG-CGCCG      TATATCTTCGCTGGT  64 130
   Bphy_2070 NONE
   Bphy_2071 2323295 .. 2323308 +  -4.5  -2.60194   CTCCGCACACGTTAC               CTCTG GGCA CAGGG                CTTGCTTAACCGCAT  43 49
   Bphy_2072 NONE
   Bphy_2073 NONE
   Bphy_2074 2324747 .. 2324762 +  -4.6  -3.95324   GTAGAACACGATGCG              CACGCC CATC GACGTG               TTCTTGTTCGACGTC  62 450
   Bphy_2078 2330318 .. 2330332 +  -6.4  -3.34013   CGCCTGCCCCTGCAC               GACGAG CAA TTCGTC               TTCCTTGAACAGCTG  55 501
   Bphy_2080 NONE
   Bphy_2081 2335685 .. 2335721 +  -5.8  -4.07568   CGGCATCCCAAAGCC   GCCCAGCAACGCGGCGAG CGG CT-GCTTCGATGC-GGGC   TTTTGCGGCGCGGCA  66 137
   Bphy_2088 2343854 .. 2343880 +  -8.7  -2.66235   TGCCCGGTTAAACTC        GACGGCTCGCGC GTTT GCGC-ATCCGTC         ATTCGTTGATGTCTA  56 102
   Bphy_2089 2348355 .. 2348368 +  -2.3  -3.16564   AGATCACGATCTCGT               TCGCG TCGC CACGA                TTACTCGCATACAGG  42 382
   Bphy_2091 2350078 .. 2350101 +  -7.4  -3.12847   CTGCAAGGACAAGCC          GCCAACGG-CA TAA TGACCGTCGGC          TTCGCTATAGCGCTT  55 296
   Bphy_2093 2352696 .. 2352717 +    -8  -3.73068   CGTAGCTATGACAGC           CGGTGCGT GCGGCA ACGCACTG            TTGTTGCATTGCACA  67 65
   Bphy_2094 2354250 .. 2354267 + -12.7   -4.8622   GATGAATGCAAAAAA             CGGCCTC CTAC GAGGCCG              TTTTTCATTGAAGCG 100 118
   Bphy_2096 NONE
   Bphy_2097 2356845 .. 2356856 +  -3.6  -3.76492   CCGGATCTTTAAGCA                CGCT GCGC GGCG                 TTTCGTCGGGTTCGC  54 29
   Bphy_2098 2357489 .. 2357508 +   -15  -4.06678   TCTCCCGAAAACAAA            CACCCCGC ATGT GCGGGGTG             TTTGTGTCGATGCAT  95 71
   Bphy_2101 NONE
   Bphy_2102 NONE
   Bphy_2103 2362348 .. 2362404 +  -4.3  -2.84051   AACGTGGACACCGCA GATGACGTGAGCACCCGGCCGCCTATG CGGCT CACCG-CGGCCTCGCGC-CGCGTCATC ATTTCCTCGACCTCG  45 172
   Bphy_2104 2363432 .. 2363460 + -16.7  -5.06414   CATTCGTCGTGTCAA        GCGCGCGTGGC CCGCAAA GCCGCGCGCGC        TTTTTGTTGGCGCAG 100 53
   Bphy_2105 2364159 .. 2364181 + -10.5  -4.60949   CTGCGCGAGCCACAA           CGGCCCCTG CAGTT CAGGCGCCG           TTTCTTTGTCCTGTG  91 155
   Bphy_2112 2370080 .. 2370099 + -13.6  -4.62069   TAGCAGGCAAAAAAA            TGCGCTGC CGAA GCAGCGCA             TTTTTACCATCCCGG 100 57
   Bphy_2116 NONE
   Bphy_2117 2376911 .. 2376964 +  -2.9  -3.47526   TGCGCAACACGCATC GCTG-ACATCGTGCGCGCCGCCGG CATCTGT TTGGCTGCGCGCACGCTGAACCAC TCTTTCCATTCATCG  47 55
   Bphy_2118 2377525 .. 2377558 + -13.9  -4.72986   AATACGACGCCAACA     CGCCGTCGATGATGT GAAA GCGTTATCGGCGGCG      TTTTTCATGGGCGTG 100 93
   Bphy_2119 2378645 .. 2378679 + -27.4  -3.31461   GCAAGCCGATGACAA     CGCGGCCATTCATGCA GAC TGCATGAATGGCCGCG     TTGTCAAGATGGCTG 100 153
   Bphy_2120 NONE
   Bphy_2121 2382870 .. 2382887 +  -8.3  -4.05788   GCCGCCAATGTACAA             GCGCCGC ATTT GCGGGGC              TTTCGTTTGGAACGC  71 62
   Bphy_2127 2391269 .. 2391306 + -21.4  -4.57837   AGCGCTTGCTGTTGT   CG-AGCGGTCCGTGGGC CATCT GCCCGCGGACCGCTTCG   TTTTTGGCGGCGTGT 100 59
   Bphy_2135 NONE
   Bphy_2136 2400596 .. 2400620 + -10.8  -5.72622   AATGCCAAATGAAAA         CCCGCAACAGC TCGC GCT-TTGCGGG          TTTTTTGTTTGTCAC 100 215
   Bphy_2138 2401592 .. 2401604 +  -4.7  -2.83894   ACCCATACAATCTCG                CCGTC GCC GCCGG                TCTGATGATCGTCGT  45 288
   Bphy_2139 2402109 .. 2402151 + -11.9  -2.75268   GACGCGCCTGGCACG GCCG-CGGCGCCCCGCT-CCG CCG CGGCATCGGCGCGCCGACCGC GTTTAACAATCATTG  65 44
   Bphy_2140 2403647 .. 2403666 +  -5.6  -3.29144   CCAGCGCTGCAGAAC            TGGCGGCC TGAT GGTCGACA             TTGTCGACGCGGTCA  52 15
   Bphy_2141 NONE
   Bphy_2142 2404845 .. 2404861 +  -3.6  -2.98823   GCGCACAACACGCCC              GGCCCA CGCGA TCGGCC              TGTCTCTCGGCACGG  43 85
   Bphy_2143 2406410 .. 2406463 + -12.4  -2.52896   CCGTCTATTCTTGTA GA-CGAAGCCTTCGACTGCCGCCGT TCATC GCGGCATCCGGCGAAGGCTTCGCTC TGCCTTCGAAACTCC  68 66
   Bphy_2144 2407578 .. 2407597 +  -7.8  -2.86011   GCGACTGGCGGAACA            GCGCCATC AGCA GATTGCGC             TCGTATTTGCGGTTC  52 490
   Bphy_2151 NONE
   Bphy_2152 2413679 .. 2413692 +  -5.3   -4.2349   CCTCGCAGCATGTTT               TGCAA TTGC TTGCA                TTTTCCCTATGCCAA  68 242
   Bphy_2153 NONE
   Bphy_2154 2414988 .. 2415005 + -12.7  -4.27316   CGCGACAAACACAAA             GGGGAGC CGCG GCTCCCC              TTTTCCATTGCCCGC  95 59
   Bphy_2157 2420688 .. 2420698 +  -3.2  -4.18018   TTCGTATACAAAGTC                 GTGA TCA TCGC                 TTTTCGCTCCCCCGG  62 140
   Bphy_2158 2421324 .. 2421340 +  -8.7  -3.36175   TGATCAGGTCCTGCG              CGGCAAT GCC GTTGCCG              TTATCGGTAACCGTT  63 361
   Bphy_2161 2424036 .. 2424049 +  -9.5  -4.09685   CGAACAGCAGCACTT               CGGCG CCTT CGCCG                TTTTCGACGGTGACG  76 164
   Bphy_2163 2425936 .. 2425969 +  -5.2  -3.21747   CAAGCGATGGCAAAA    GCT--CGGGCAGGCAC GGAT GGGCCGGCCCGCGAGC     TTCGTAATACAGTCG  48 59
   Bphy_2164 NONE
   Bphy_2165 NONE
   Bphy_2166 2428475 .. 2428492 + -10.5  -4.77036   TTATGTAGTTTTACA             GGGCGCT TACC GGCGCCC              TTTTTCATACTCACG 100 55
   Bphy_2167 2430202 .. 2430229 + -14.2  -5.95539   CGAGAGGCGCGTATC        GGTGCGATGTCC GAAA GGGTATCGCACC         TTTTTTTATTTCCGC 100 92
   Bphy_2170 2434302 .. 2434312 +  -3.2  -4.18367   CGGGGAATTCGCGCG                 CCAT GCC GTGG                 TTTCTGTATCTGATC  62 42
   Bphy_2171 2434668 .. 2434684 +  -3.7  -4.14392   ATCCGCTTTCACTCG              CACTG GCAGCAA CAGTG              TTTTCACGATTCGCC  62 57
   Bphy_2172 2435342 .. 2435357 + -10.4  -2.62184   GCCCAAAAACAAAGA              CGCTCC CGAG GGAGCG               TCCTGTCAGCCACGA  60 250
   Bphy_2174 NONE
        fabG 2438558 .. 2438570 +  -4.7  -4.08064   CTCGGTGTTTTCACT                GACGC CGG GCGGC                TTTTCAGCGCGCGTT  61 121
   Bphy_2176 2440017 .. 2440035 +    -8  -4.63952   TGAATCGCTAGGGCG             CCTGCGCG GCG CGGGCGGG             TTTCTTGTTTCTGGT  81 30
   Bphy_2180 2447828 .. 2447855 + -13.4  -4.66609   ACCGGCTGAGTTGGT        TTGCGCTGCGGT TCTT GCCGCGGCGCAG         TTTTTCGCTGGCATC 100 32
   Bphy_2182 2449741 .. 2449753 + -10.5  -3.08283   GCCGACGAAAAGCCG                CCCGC GCC GCGGG                TGTTAAAATCGTTGT  64 49
   Bphy_2183 2451275 .. 2451300 + -15.5   -5.5112   CTGCCGATGCTCAAA         GGCGAACTCTC TTGC GAGGGTTCGCC          TTTTTTGTTGGTGGC 100 50
   Bphy_2184 2452467 .. 2452485 +  -4.4  -3.59979   CAGATCAGTCGTTGC             CGGCTGTG TCG CCCAGACG             TTTGAGCTGCGCGAC  54 158
   Bphy_2190 2459377 .. 2459395 + -13.1  -5.82316   CTTGTCGTTGTTGCT             CCGGGGC CCATA GCCCCGG             TTTTTTTTGCCTGCT 100 256
        metG 2461968 .. 2461985 + -11.3  -5.86061   CCGTCAACCAGGAAA             GCACGTC TTCG GACGTGC              TTTTTTTTCGTCCGG 100 68
   Bphy_2192 2464211 .. 2464236 +  -8.2  -5.55664   TGGTCCGCAGATCAA         CCGGCGAGGCG CGCGA CGCA-CGCCGG         TTTTTTTCGTCGTCC 100 72
   Bphy_2195 NONE
   Bphy_2196 2471880 .. 2471906 +   -13  -2.75535   CCTGCCCGCCTGACA        GGCTGCCGGCC CGCTCC GGCCGGC-GCC         TCGTTCCAGTATTCG  69 28
        panC NONE
   Bphy_2198 2473398 .. 2473430 + -11.4  -5.27335   GCCGCAGTTGCACAC     GGGCTGACGATGCGCG AGC CGCGCGT--TCAGCCC     TTTTTATTTGCGCCC 100 60
   Bphy_2200 NONE
   Bphy_2201 NONE
   Bphy_2204 NONE
        cobD NONE
   Bphy_2206 NONE
   Bphy_2207 2482452 .. 2482472 +  -2.4  -3.53811   ACCAGGCGCGCACGC            GCGTCACG AACTG CTCGACGC            TTTCCCCGCCATGCG  47 245
   Bphy_2214 NONE
   Bphy_2215 2489774 .. 2489798 +  -4.2  -2.52623   AAATGGAATTCTGAC          GGGCTTGATG GTTGG TGTCGGGCCC          ATGTTGTAGAGCAAA  42 39
   Bphy_2216 2490110 .. 2490121 +    -3  -4.01946   TCGCTAGAGCAAAAC                TGTT CGCA AACA                 CTTTTTTCTTTCTCA  57 52
   Bphy_2217 2490623 .. 2490635 +  -6.9  -3.60098   AAACGAGCAGCATGA                TGCGC AAT GCGCG                TTTGCGCTGACGCAT  60 26
   Bphy_2218 2491652 .. 2491669 +  -7.7  -3.16564   CTAACCCCGGCCGCC             TGGGCCGC CGA GCG-CCCA             TTCCTCCGATACGCC  57 139
   Bphy_2221 2495494 .. 2495527 + -21.9  -2.56747   GCATGCGTCGATGGA     TAAAGGGGCACACGG ATCG CCGTGTGCCCCTTTG      CTCTTATAATGCGTC 100 96
   Bphy_2222 2495973 .. 2495985 +  -3.3  -3.53012   GCCTCGCGAACCCAG                CGCAG CAT CTCCG                TTTCCAGCGCGAGCG  49 92
   Bphy_2226 NONE
   Bphy_2227 2501149 .. 2501162 +  -3.7  -4.61482   GCTGAAGTGGGTCGA               CCGGC ACTA GCCTG                TTCTTTTTTGCGGGG  70 16
   Bphy_2228 2501545 .. 2501559 +   -10  -3.61609   GCGATCGCGGGTTAT               TGCCTG CGG CAGGCA               TTCTGATTTCGCTGC  73 5
   Bphy_2236 NONE
   Bphy_2237 2511616 .. 2511648 +  -7.6  -3.86346   TCGAGTCGACGGCGA      CGACGGCGTCCATC TGCTC GATGCACGCGGCCG      TTTCTGCGAACGTCC  67 274
   Bphy_2239 2513483 .. 2513527 +  -8.3  -3.05384   TGGCGGCACGCGCGT CGCATCTCGCGCGACCGCG CTGTCGA CGCGCCCGCGCGTGAGCCG TTGCGTCGCGCCGCC  57 263
   Bphy_2246 NONE
   Bphy_2247 2521665 .. 2521685 + -16.1   -4.4874   CTCGCTTCATGTCGG            GCGCCGGCT TCA GGCCGGCGC            TTTTCAATTTTTACG 100 56
   Bphy_2248 NONE
   Bphy_2249 2523827 .. 2523855 + -12.5  -4.88407   TGCGCCAGCAACCAA       CGGCGGATCGGC GTGCAA GCC-ATCCGCCG        TTTTTCATTGCATAC 100 60
   Bphy_2251 2525572 .. 2525597 + -14.7  -2.74523   AGCGGTGCGCCATGT         GCGGG-CGGCGC ACC GCGCCGGCCTGC         TGGTCTTGCCGATCC  77 82
   Bphy_2252 NONE
   Bphy_2253 NONE
   Bphy_2254 2529302 .. 2529319 +  -9.9  -3.12595   ACGCTGTGGTTGAGA             GCTACCT GGGG AGGTAGC              TGTTGGGTGGTTGGC  64 9
   Bphy_2255 NONE
   Bphy_2256 2531093 .. 2531103 +  -2.4  -3.20382   CCTTTCACATACGCA                 TGGC ATA GCCC                 TTGCTGCATATGGCG  43 121
   Bphy_2257 2531998 .. 2532011 +  -2.3  -2.66316   CGATCTGTAAGCGGT               GCGTC GGTT GAAGC                TGGTATCGTGAGGCG  38 31
        ureA NONE
   Bphy_2259 NONE
        ureC NONE
        ureE NONE
   Bphy_2262 NONE
   Bphy_2263 2536560 .. 2536573 +  -8.1  -5.08824   GAGGTTTTTTGTCTG               CGACG CGGT CGTCG                TTTTTTGCCTGCAGC  93 39
   Bphy_2268 2543403 .. 2543413 +  -6.8  -4.09685   ATCCGTTACAAGCTG                 CGTC CAT GACG                 TTTTCCCCACTCACG  68 17
   Bphy_2269 NONE
   Bphy_2270 NONE
   Bphy_2271 2546567 .. 2546588 +  -2.9  -4.87133   CCGATCCGGCGATTG           CA-GCGCGAG TGC CGTGCGCATG           TTTTGTTTCACGCGT  75 111
   Bphy_2272 NONE
   Bphy_2273 NONE
   Bphy_2274 2549503 .. 2549519 +  -2.9  -4.07885   TGCGCTGATTCCAGT              GCAGACG ATC CATTTGC              TTTTCAAACCGGCTC  57 118
   Bphy_2275 2551072 .. 2551095 +  -7.4  -3.14931   CGATCTGATGAATGC          GAAAGGGTGT CGAG GCACCCCTTC           TTCATGAGAGCTAGC  54 33
   Bphy_2276 NONE
   Bphy_2277 2554041 .. 2554062 +  -6.6  -2.74514   GCCCGCCGCGTGCGT           CCGGACATC ATGCG GATG-CCGG           TGCTTAAGCGTTTCG  50 467
   Bphy_2278 2554332 .. 2554346 +  -4.2  -3.21126   CTCCCCGTGACGATG               CTGTTC CGC GAACCG               TTCGTCGGTGTAATT  48 104
   Bphy_2279 NONE
   Bphy_2280 2555553 .. 2555573 +  -3.9  -3.66999   CGCTGATTCGACTTC            GATACGCTC CAC GTTCGTATC            TTTGAGTACCTCGAT  51 35
   Bphy_2281 2557054 .. 2557070 +  -2.1  -3.63744   CGTACTGATATAAGT              CGCCCGA TAG TCCTGCG              TCTTTTCGGGGCCCG  50 301
   Bphy_2283 2560073 .. 2560088 +  -6.8  -2.98015   AGTCCGGCCGGATGC              GGCGAT CGAA GTCGCC               TATATGGTGCTTCGA  51 55
   Bphy_2284 2562526 .. 2562538 +  -3.3   -5.2189   ATGGTCCACAATCGG                CTTCC GAA GGATG                TTTTTTCCTGCTTCA  84 429
   Bphy_2285 2562936 .. 2562946 +  -6.8  -3.49777   AGCCGCGGGGCCCGT                 GGCA CAG TGCC                 TTGTCGTCTGTCCAG  58 75
   Bphy_2286 2564561 .. 2564588 +  -3.3  -3.42699   GAGCGCCTTCGCAGC        CGCTGCAGCCTG CTCGA CAAGC-GCCGCG        TTCTGCTGCGTCACT  47 518
   Bphy_2288 2567494 .. 2567507 +  -9.5  -4.88407   ACAGACATGAAAAAA               GGCGC CTCG GCGCC                TTTTTCGTTACATCA 100 169
   Bphy_2293 2574024 .. 2574053 +   -10  -3.27022   AGCCCCCGGCGCGCT       CGCCGCAACCCGC TCGTC GCCGGTTGCG-CG       TTCATGTACCATACG  65 47
   Bphy_2294 2574616 .. 2574649 + -11.6  -3.07043   TCGGTTGATGGTCGG     CGGTCG-GCCGGCCG TCATT CGGCCGCCGCGCCCG     TCTTGCGCTGATCGC  68 33
   Bphy_2295 NONE
   Bphy_2296 NONE
   Bphy_2297 2579161 .. 2579183 +    -2  -4.94243   AATCTGGCGTATTCG          GCGGACGGA CGCTGT TCCGTT-GC           TTTTGCTTTTTTTGC  75 249
   Bphy_2298 NONE
   Bphy_2299 2583004 .. 2583023 +  -4.8  -3.80114   ACCCGGCAGATGTCC            GGCGGCCG GCTG CGCCCGCA             TTTCATGCATTGGTC  57 230
   Bphy_2303 NONE
   Bphy_2304 2589299 .. 2589315 + -11.5  -2.70932   CCTGGCGAGATGAGA              GGCCGCG CGA TGCGGCC              TGATTAACCCGGACA  65 63
        apaH 2606580 .. 2606590 +  -8.2  -2.62184   GCGGCCGACACGCTA                 CGCG TGG CGCG                 TCATGTCGACGCCCG  52 43
   Bphy_2331 2614927 .. 2614937 +  -4.6  -4.56597   ACCTCGTCAGATGCC                 TGCG CCG CGCG                 TTTTTACCGCAACGC  70 198
   Bphy_2332 2615801 .. 2615828 + -17.2  -5.40072   ACCAGAGCACCAAAA        GAAAAACCCGCA TCGC TGCGGGTTTTTC         TTTTTTTGGCACGGG 100 74
   Bphy_2335 2619315 .. 2619331 +  -5.8   -3.0682   AGACTGCCCGGAACA              TCGTCG CATCA CGGCGA              TATGTCTATCCTGCC  49 109
   Bphy_2343 NONE
   Bphy_2344 2631833 .. 2631852 +  -2.1  -4.08706   TGCGGCATTCATGAC            GCCGT GAAATCATAA ACGGC             TTTATCTGATCGCAA  57 104
   Bphy_2345 2632788 .. 2632813 + -12.5  -4.48987   GCTGGAAAAACCGAA         GAGCGATGCGC GATG GCGCGTCGCCC          TTTTCGTTGTGCCGC 100 66
   Bphy_2347 NONE
   Bphy_2348 2634963 .. 2634979 +  -2.1  -4.18018   TGGCGCCGAACGTAA              GCCCTGC CAC GAAGTGC              TTTTGCATGGCGAAG  58 129
   Bphy_2354 2642604 .. 2642618 +    -7   -3.0127   ATACGTCGCATGAAT               GCGCCG AAG CAGCGC               TGTATCGTTCAATCC  52 64
   Bphy_2355 2643853 .. 2643892 +  -8.6  -3.69354   GCACCACGCACAGGC GGCC-CATCGGCTGCGCG AACAGG TGCGCAGCAG-TGCGGCC  TTTAGCGTTGTGCGC  64 45
   Bphy_2358 2648426 .. 2648436 +  -2.4  -2.86271   TTTGCTACGTACCCT                 TCGC ATT GCGC                 TACTTATGCTGAACG  40 379
   Bphy_2360 NONE
   Bphy_2361 2651363 .. 2651378 +  -8.2  -3.02144   CATCCGCGCGCTCGA              CGCGGT TGCT GCCGCG               TCTTCCCGCCCGTCC  56 350
   Bphy_2365 2658548 .. 2658572 +  -9.9  -3.65046   GATTCTTCACACATG          CGTGCGGCAAG GTG CTTGCCGACCG          TTGTTGCCATCGCGA  68 226
   Bphy_2370 2663388 .. 2663411 + -12.4  -3.01712   CGTCCTTTGGCATTC          GCTCGGGAAG TCTA CTGCCCGAGC           TCTTCGGCGAGCCCG  72 468
   Bphy_2373 2665754 .. 2665770 +  -7.2  -3.75153   ATGGCGGCCACCCAT              GCGCTC TTCGT GGGCGC              TTTCCGTTGAAACCA  63 140
   Bphy_2374 2666334 .. 2666347 +  -5.9  -4.19735   TACACCGCCAAACGA               CGTCC CCTC GGGCG                TTTGGTTTTGCGCCG  66 219
   Bphy_2378 2671562 .. 2671573 +  -4.4  -3.83026   TACGGGCCGGTGCAT                GTTC GACA GAAC                 TTTGATATCGCGGCA  57 56
   Bphy_2392 2687835 .. 2687883 +  -8.7  -3.29511   GCGCTTGAGGTTCAG TCCGCGATCGCCCGGCATCCGC ACGCCC GCGGTTCCTGGGCGCG-GCGGA TTATCGCGGCATGCG  59 195
   Bphy_2394 2690289 .. 2690301 +  -6.9  -3.17075   GTGAAGCATTGGTCC                TGGCG CTT CGCCG                TTGGATTGCGCGACG  51 438
   Bphy_2398 2696004 .. 2696019 +    -6  -3.62522   GATCACCTTCTCGAC              GCGCCG GTTC CAGCGC               TTGTTGCCCGCCTTC  57 373
   Bphy_2406 NONE
   Bphy_2407 NONE
   Bphy_2408 2707133 .. 2707165 + -17.8  -3.78953   CGGCTTATCGGCAAA      CGCCGCATGTATCG ACACA CGGTGCATGCGGCG      TTTCCTGCTGCGCAT 100 149
   Bphy_2409 NONE
   Bphy_2410 NONE
   Bphy_2411 2713278 .. 2713291 +  -2.3   -3.7829   TGCTGCTGAGCATGG               CCGTG CAGC CACTG                TTTGATCGGTATGCT  52 7
   Bphy_2412 2714473 .. 2714485 +  -6.2  -4.09685   CGCGAGGCTGATCCA                CGGC GGATG GCCG                TTTTGCCAGGTGAGC  66 473
   Bphy_2414 2716460 .. 2716484 + -11.3  -3.05963   CCTATCGGCGAGGCA          TGCGGGATGCG CGA CGCGGCCCGCG          TCTTCGCGTCACGCT  68 434
   Bphy_2417 2719233 .. 2719245 +  -9.1  -3.75169   CCACGTAACAGGCGA                TGCCG CAA CGGCA                TTTCGTCAAATGATG  71 88
   Bphy_2418 NONE
   Bphy_2419 2721584 .. 2721597 +  -9.5  -3.14931   ATCACGAGGAAGTAC               GCGCC GGCG GGCGC                TTCGTCGACGATGGC  60 349
   Bphy_2423 2727402 .. 2727412 +  -2.4  -4.14874   TGGCGGGTGCTTTTG                 CGGC GCG GCGG                 TTTTCGGGATCTTGT  60 47
   Bphy_2428 NONE
   Bphy_2429 2732140 .. 2732182 +  -4.2  -4.08945   GCGCAACGTCGTCGA GGCGCCGC-CCGCGAGCGG TTGAAGTT TCGCT-GCGGAGCG-TGCC TTTTCAAACGCTCAT  61 4
   Bphy_2431 2733982 .. 2733992 +  -6.8  -3.06796   AACGCAGACTGCACG                 GCCA ATA TGGC                 TTAGGTACAATCCCC  52 96
   Bphy_2432 2735346 .. 2735358 +  -4.1   -3.3573   TGTAGCATCTCGCCC                GATGA AAG TCGTC                TTCTCCCGTGATTTC  47 102
   Bphy_2433 2736703 .. 2736753 +  -6.7  -3.01924   GGCTGCCGAACGAAT CGCCCGTCGGCCCGCTGATCG TGCCCGAAC CCATCAGATCGCCGACGCGCG TATTGCAGCCCGATA  50 224
   Bphy_2436 2740466 .. 2740508 +    -9  -2.87344   CCAGCAGCGCGCCTT CGTCGCC-CGCCGCACGCCG TAGTT CGTCGAGCAGCGCGGCG-CG TGTGTCGGCGGGCTG  55 283
   Bphy_2438 2742378 .. 2742412 + -17.3  -4.68593   CAAACGGCGCCTATT     TAAAAGCCCGCGTTC TCAAC GAACGCGGGCTTTTC     TTTTTGCCTCGTCAG 100 56
   Bphy_2440 2743774 .. 2743801 +   -14  -2.75064   GTAATGCGCGCGAAG        CCCCGGCCGCGC ATTC GGGCGGCCGGCG         TACTTCGCTGACAGG  73 37
   Bphy_2441 NONE
   Bphy_2442 2744801 .. 2744815 +  -7.8   -4.2349   CGCCCTGACATGGCG               CGCGTC GTC GATGCG               TTTTCCATCTAGCGC  75 33
   Bphy_2450 NONE
   Bphy_2451 2751463 .. 2751475 +  -3.3  -3.55761   TCGGCGAAGGACCCG                CCGAA GCT TCCGG                TTTGCCGACTGAATG  49 97
   Bphy_2452 NONE
   Bphy_2453 NONE
   Bphy_2454 2753747 .. 2753788 +  -4.9  -3.96148   CGGCCGCCTGAAGCC ACGTTTACGGTTCGCCCGC TCGC GCGGGCCTAGCGGGAACGA  TTTCTGCTCAAGGCG  59 30
        tolB NONE
   Bphy_2456 2755656 .. 2755666 +  -2.4   -2.8805   GGCGCAAAACCGCCG                 CGCG GAC CTCG                 TCTATCAACAGTAAT  40 1
   Bphy_2457 2756546 .. 2756568 +  -9.1  -5.07652   GCCTCTCGCCGAAAA           GCCCGAAAC TTCCC GTTCCGGGC           TTTTCTTTTGAAGCA 100 126
   Bphy_2460 2761339 .. 2761363 +  -6.3  -3.08679   CCCAGCACCGGCACG          CGATGATCGAG GGC CTCGAGCGGCG          TCTTCAATGCGACGC  49 266
   Bphy_2463 2765688 .. 2765706 +  -5.8  -4.11216   ATGGCCTCGCTTCAT             CGCCCGGC AGC GCCGGCCC             TTTTCGCACTACGCC  65 73
   Bphy_2464 2767057 .. 2767076 + -13.6  -5.61596   GCGCCAAAGAAAAAT            CCCGCGAT CTGC ATCGCGGG             TTTTTTTATGGCGCT 100 82
   Bphy_2467 2770702 .. 2770746 + -29.6  -3.26745   AGCCATGCAAAAGCC GAAGGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCCTTC TCTCTTTCCGGTGTC 100 52
   Bphy_2477 2786712 .. 2786725 +  -3.7  -3.65991   GTGCGTGGGGATCGC               CGTCG TCGT CGCCG                TTGTATTCGGCACCT  51 326
   Bphy_2478 2787437 .. 2787457 +  -3.1  -3.81146   ACACGACGCTCACAC            CCGGCTCAG CAA CTCGGCCAG            TTCTTCCTTCACGCC  54 108
   Bphy_2480 2789725 .. 2789738 +  -3.7  -4.56597   GGCGCCAGTACGATC               CGCCC TTTT GCGCG                TTTTTGCGCGCACAC  68 132
   Bphy_2481 2791294 .. 2791321 + -13.4   -4.4267   CGTCGTTGTGACATC        GGGGGTCTCCGG GCAA CGGGAGACCCTC         TTTTGCATTTTGGCG 100 70
   Bphy_2482 2791975 .. 2791994 +   -15  -3.91144   ATCGATGATTGCAGG            CGGCGGCA ACTG TGCCGCCG             TTTCTCGCATCTCGG  93 127
   Bphy_2483 2793004 .. 2793037 + -12.5  -2.55213   TCTCGATTCGTTGCG     CGGGCATCCGT-CGAT TGC GTCGAACGAATGCCCG     TGACTTGCGTGGGTC  68 51
        mutL NONE
        miaA 2797051 .. 2797062 +  -3.6  -3.14132   GAAAGCCGCTCACAC                CGCG AGCC CGTG                 TTCCTGCCGACGGGC  45 72
   Bphy_2488 NONE
   Bphy_2489 NONE
   Bphy_2490 NONE
   Bphy_2491 NONE
   Bphy_2492 NONE
   Bphy_2493 2804348 .. 2804366 + -12.4  -3.01791   GCACGCTATAGCGTC             CGGCTGCA GCG TGCGGCCG             TATTACCAACGGACT  72 30
        panB 2805212 .. 2805231 +   -15  -4.07568   TCTGATTCAAGCCGG            GCGGCGCT TTCG AGCGCCGC             TTTTCAGGACCGGGC  95 36
   Bphy_2500 2812343 .. 2812362 +  -5.6  -3.77832   CGCCGCTCGTTCTCC            TGCAGGCG CTTC TGCCTGCC             TTCTTGCGTTTCCGC  60 103
        ppnK NONE
   Bphy_2505 2818169 .. 2818184 + -10.4  -3.06315   CCGAAGCGCGACACC              TCGCGC AGCA GCGCGA               TATTGCCCGTGTTGC  63 267
   Bphy_2507 2825260 .. 2825279 + -10.7  -3.53012   CGCCGGCGCTACATG            CAGCGCG GCATCG CGCGCTG             TTTGCGAGCGCCCGA  70 63
   Bphy_2508 NONE
   Bphy_2509 2828027 .. 2828045 + -11.7  -5.76949   AAATTCCCGAAAAAA             CCGCCAG CGAGT CTGGCGG             TTTTTTTTCGCCCTA 100 268
   Bphy_2510 2829271 .. 2829291 +   -14  -5.42259   TTCTACGCAGACTTC            GCCCGGCT CACGC AGCCGGGC            TTTTTTTGGCCATCC 100 57
   Bphy_2513 NONE
   Bphy_2514 2833265 .. 2833293 + -16.7  -3.13432   TCTGAGCACCGCACC        GCGCCATGCCGCT GTT GGCTGCATGGCGC        TTGCGTCGTCTTGCG  89 36
        glcE NONE
        glcF 2835800 .. 2835812 +  -6.9  -2.91452   CCAGGTCGTGGCGCG                CGGGC AGC GTCCG                TATAATTCGAATCGT  51 88
   Bphy_2517 NONE
   Bphy_2518 2837779 .. 2837795 +    -8  -3.13299   TCTTGATGTCGTCGT              CGCGAT CGACC ATCGCG              TATTCGGTGTCGTAG  55 424
        queA 2845865 .. 2845889 +  -5.6  -3.75024   GCATAATCCTTCACT          CGCTGCCGGA AACGC TCCCGCAGCA          TTCTTCATCATGCGC  60 35
         tgt 2847282 .. 2847306 +  -4.9  -3.91792   GTGCCGTCCCGTAAA          TGGCCGGTGGT AGA ATAACCGGCTG          ATTTTTTTCGATTGT  59 165
        yajC 2847681 .. 2847712 + -12.2  -2.99319   GTAAGGCCTGCTCTC      TTGCGTCCGGCGCG GCCT CGCGCCGAGCGGAA       TCTCTATCCGCGCTT  72 37
        secD NONE
        secF 2850844 .. 2850865 + -15.9  -4.14725   TTAGCACCAGAAAAA           GGCCGGTTC AATC GAACCGGCC            TTTGTCGTTTACATC 100 66
   Bphy_2533 NONE
   Bphy_2534 NONE
   Bphy_2535 NONE
   Bphy_2536 2858423 .. 2858444 +  -4.4   -3.1506   CGCAGGGCACAGCGA           GGCGAC CGCGTACAAT GTCGCC            TTAATCAACGCCTTT  48 108
   Bphy_2537 2859774 .. 2859790 + -11.5  -5.45652   TTACCTCCACAAGAA              GCGGGCG CCA TGCCCGC              TTTTTTGTTGCACGT 100 50
   Bphy_2538 2860329 .. 2860342 +  -9.5  -2.78384   GAACGCGCCGGGAGA               GCGCC GTGC GGCGC                TATCATCGCGGGAGA  57 50
   Bphy_2539 2861415 .. 2861431 +  -4.3  -4.60041   GGGGCCGGTAGCGTC              CGATGGC GGA GTCAACG              TTTTTGCCAATGCCT  75 366
   Bphy_2544 NONE
        mnmA 2866848 .. 2866888 +    -9   -3.1506   GTCGACCGCTCTGCG TG-GGACTGGACTAGGCGC TGAA GCGCCAACTCCAGTCGACA  TTGCTGCACCGATTT  61 136
   Bphy_2546 2868764 .. 2868794 +   -14  -4.44667   GATGCGCCATGAAAA       ACGCGCGCTGGA CCTGACA TCCAGCGCGCGC       TTTCTTGTTGGGCGA 100 63
   Bphy_2549 NONE
   Bphy_2550 2873361 .. 2873388 +  -7.6  -3.73968   GCGGCATCCGATAAG        GCCGCCGCCGTTC TAT GGGCG-CGGCCGC        TTTCATAGAAGATTT  67 47
   Bphy_2551 NONE
   Bphy_2552 2874818 .. 2874838 +  -5.4  -3.53811   CTGCGCAAGAAGCTG            CAACAGCA CGGCC TGCTGTAG            TTTCGGCGCCCTGCC  55 5
        purH 2876473 .. 2876501 + -24.7  -4.83759   CTGCTTGTTCCGCAA        CGGCCCGGCAGTT TGC AACTGCCGGGCCG        TTTTTGCATTTGATT 100 50
        ruvC 2877176 .. 2877208 +  -3.2  -3.57263   GCCGAGCAAATATTG     CGGCCAGCGCGGCGG GCGT TCGCCGC-CAGTCAG      TTTCACGCTCAGCCT  51 104
        ruvA 2878541 .. 2878558 + -12.7  -3.05844   TTTCCTGCGCGACAC             CCTGGCC GTTC GGCCAGG              TCTTCGAATGGGCCA  72 83
        ruvB 2879682 .. 2879717 +  -6.2  -2.85668   GCGATAAGACACGCG   GCGCTCGACATC-GCC GCGTCA GGCGGAGGTC-AGCGC    TCTGGTCTGGGCGTC  48 50
        anmK 2883533 .. 2883548 + -11.8  -4.08216   CGCACAAATAAAAAA              CGGGGC CGAA GCCCCG               TTTTGCCGCCACTGA  84 43
   Bphy_2565 2886108 .. 2886147 + -21.6  -3.53012   CGAGCCAAGCGCAGC  TGGAAAATGCCGGCGTCC CAAC GGACGCCGGCATTTGTCA   TTTGAGCGGCAAAGC 100 50
   Bphy_2568 2889728 .. 2889747 +  -5.6  -3.04398   TATCAGTGCCGCGCG            GCTTACCG TGCG CGGTCGGC             GTTTTACACAGAAGC  49 128
   Bphy_2576 2898406 .. 2898416 +  -4.6  -3.18264   ATCGTTCTGAGCCAC                 GGCC AGC GGTC                 TTCATCCGTCAACGG  49 518
   Bphy_2581 2903958 .. 2903986 + -17.5  -4.10161   ATGGCTGCATAAATG        CAAAACGGGCTCC GTC GGAGCCCGTTTCG        TTTTGAAGCGTACTG 100 73
   Bphy_2583 2921121 .. 2921150 + -22.3  -4.67011   GACCAGAAGCACAAA       GCCCGGTTTGCTG TTTC CAGCAAACCGGGC        TTTTTACATGCGCTT 100 84
   Bphy_2593 2931495 .. 2931535 + -17.8  -3.68619   CATTTTCAGTAAGAA GCAGAAAGGCCCGGCTGAT GAGA ATCAACCGGGCCTTT-TGC  TTTCCCTCGCTTACC 100 43
   Bphy_2597 2935532 .. 2935548 +  -2.1  -5.00884   GACGCAGTCGCCATT              CCGGGGT TTC GCTGCGG              TTTTTTCGCGGGCAT  75 55
   Bphy_2600 NONE
   Bphy_2601 2940674 .. 2940704 + -15.4  -5.45652   GCCCGACTGAAATGC       AAAAGGCCCGCCTG TTT CCGGCGGGCCTTTC       TTTTTTATTGCAGAT 100 74
   Bphy_2605 NONE
   Bphy_2606 2946271 .. 2946294 +    -3   -4.1552   TGCGCTCTGGCGGAT          GTCGCTCTGA TCAT TCGCAGCGTC           TTTCTTACCCGAGTC  60 16
   Bphy_2607 2946837 .. 2946848 +  -7.2  -3.35679   TTCTTCCGCCGTGGA                CGGC GGCA GCCG                 TTCTCGATGACAGCA  56 42
   Bphy_2608 2947411 .. 2947429 + -13.2  -3.16564   CGTGACGCAACGAGC             CGCGTTTC AGA GAAACGCG             TTGATGCGCTCGCGC  78 53
   Bphy_2620 2959861 .. 2959887 + -15.3  -3.84451   TTCAGAAGCAAAAAA         CGGCGATTATC TGCAC GATAATCGCCG         TTTCGATTTGCGCCG  93 47
   Bphy_2626 NONE
   Bphy_2627 NONE
   Bphy_2628 NONE
   Bphy_2629 NONE
   Bphy_2630 NONE
        prmA 2970902 .. 2970916 +  -4.9  -3.61654   CCCATTCGGCACCCT               GGCCG CCAAC CGGTC               TTTCGGCTCGATATG  54 68
   Bphy_2632 2972668 .. 2972681 +  -3.7  -3.29511   GTAACCCGTCGATCT               GCAGC GCGT GCAGC                TTGTCCGCGCGTCCG  47 37
   Bphy_2633 2973273 .. 2973304 + -22.4  -3.62096   CTTCGCGTCGATATA      GCGCCGCGCCCGTAT CGC AT-CGGGCGCGGCGC      TTTCACATCGTCGCG 100 48
   Bphy_2634 2974359 .. 2974376 + -12.7  -2.75844   CCGTTCGGGTTTGGA             GGGCTCG ATTA CGAGCCC              GTTTGGAGTCAAAGG  69 80
   Bphy_2635 2974935 .. 2974958 + -10.3  -5.93809   GTCGGCAACCTCACA          CGCATGCGC TCCCCT GTGCATGCG           TTTTTTTTGTCCGGC 100 79
   Bphy_2643 2984836 .. 2984847 +  -7.2  -3.74693   CATGATGCCGGGCAT                GCGC TGAT GCGC                 TTTGCTGCCGTCGCG  63 19
   Bphy_2644 2985589 .. 2985604 + -10.4   -5.4505   CTGCAAAATAAAAAA              GCGACC TGCG GGTCGC               TTTTTTGTTGGCCGG 100 66
   Bphy_2647 2988989 .. 2989021 + -17.7  -3.53811   TGTCCACGCCGCATC      TGCCGGTGCGGCGTG AGA TACGCTGCGCCGGCG      TTTCGAGGGAATCAC 100 52
   Bphy_2648 2989651 .. 2989675 + -11.4   -5.0925   CAGCGGCAACAAAAA          GCCGTCCCAT CGTTT ACGGGACGGC          TTTTTGATTTTCGAC 100 60
   Bphy_2653 2994173 .. 2994187 +  -9.2  -5.86965   GATTCTTCAAAAAAA               CCGTGC ACT GCGCGG               TTTTTTTTCGTCCGT 100 169
   Bphy_2654 2995630 .. 2995647 +  -3.3  -2.62184   CGCCGCTGACACTCG             GTTGGCC AATC GGCCGAA              TAGTCTGCACGCGCA  40 32
   Bphy_2655 NONE
   Bphy_2656 NONE
   Bphy_2657 NONE
        coaE 2999740 .. 2999768 +  -8.9  -3.40403   CATCGCTCGTATGTT       TCGCTCGCTGGC GCATAA GCC-GTGAGCGA        TTCTGCTCGACGACG  63 8
   Bphy_2659 3000725 .. 3000736 +  -5.8    -3.281   CCGACGCAAACAACC                CCAC CTGT GTGG                 TGTTATCGATTGCGA  52 42
   Bphy_2660 3001365 .. 3001400 +  -8.3  -3.05384   TTGCGCAAGCAGATA    GCGGCCGTCGG-GT CGAACAAGC ACGCCGACGGCCAC    TTCCGTCACCGGCCG  57 428
   Bphy_2665 3007434 .. 3007451 +  -9.8  -4.46615   GCACCACATGAAAAA             GCGGCC CGTACA GGCCGC              TTTTCGTTGCTGCTC  89 58
   Bphy_2684 3029373 .. 3029390 + -12.7   -5.5112   CGTAGTAACCCTCGA             GGGCGTC TTCG GACGCCC              TTTTTTATTGGTGCG 100 54
   Bphy_2687 3034921 .. 3034931 +  -2.4  -3.87576   TCGTCATCTCGCGCC                 TCGG ATC CCGC                 TTTAAGTTGTTGTCG  54 105
   Bphy_2689 3043522 .. 3043549 +  -4.6  -3.06183   TAAGATGCAGTTCAA        GGGCGCGCGCAC ATCC GCCCGCCCGCTC         TTCGCTGGAACTCCG  46 122
   Bphy_2690 NONE
   Bphy_2691 NONE
   Bphy_2692 3046093 .. 3046113 +  -2.4  -2.80074   ACCCTTTCAAGAAAT            TGCGTCGC CTTTC GCGCGGCA            TCCTATTCTGAAAAG  39 52
   Bphy_2693 3047486 .. 3047515 + -19.3  -3.66178   CTGACAAAAACGAAA       GCCCGACGGCGGT GATG ACAGCCGTCGGGC        TTTCCAGTTCAGGCA 100 64
   Bphy_2696 3050222 .. 3050236 +  -4.9  -2.62184   ATGCGCGGCGCGTTG               GCGTC GGTCG GGCGC               TGATATGGAAGCCAC  43 8
   Bphy_2697 3051154 .. 3051165 +  -7.2  -4.08767   GTTTTTTCATTCGCT                GCGC TTCC GCGC                 TTTTCCCGAACTGCC  68 216
   Bphy_2698 NONE
   Bphy_2699 NONE
        trpD NONE
        trpC NONE
   Bphy_2702 3056032 .. 3056063 + -10.2  -3.72893   GGCGGCGAGCGTGCA      CGCGAACGCG AGGAACCTTGAG CGCGTTCGCG       TTTGCTGCCACACTA  76 62
   Bphy_2703 3056949 .. 3056973 + -16.5  -3.96506   AAATCCAAAGAAGAA          CGCCACGGAAT CGT GTTCCGTGGCG          TTGTATTTTGCCGTC  95 76
   Bphy_2708 3063377 .. 3063394 +  -9.8  -5.81032   CGCACAGCACATCAG             GCCGCG CTACGA CGCGGC              TTTTTTTTCGCCTTC 100 82
   Bphy_2709 3064931 .. 3064947 +  -3.6  -2.92475   AATCCGCGCGTTAAT              CCACGC GAAGG GCGTGC              CTTTCTGCGAGTCAC  42 39
   Bphy_2710 NONE
   Bphy_2711 NONE
        ugpC 3067860 .. 3067878 +  -5.2  -3.57985   TGAGGGCTTTTTCTG             TCTACGAC GCA GTCGCGGA             TCTTGTCTTTTGGTC  54 38
   Bphy_2713 3069742 .. 3069797 +  -8.3  -3.28119   CCGCTAAGCGTTCGT TGCATG-GCCGTCCGCAATCGGACCGC GCTC GCGGTTCGA-TGCGAACGGCATAAGAG TTGCTCTCCATCCCT  59 34
   Bphy_2714 3071118 .. 3071154 +  -3.6  -4.44548   CTCGCCGGGCGCGGC    CTTCGCCGGCTCAG ACAGGCAAC CCGAGTTGGCGCAG    TTTTGCTTCCGTCTG  68 45
   Bphy_2719 NONE
        hemA 3076753 .. 3076765 +  -3.3  -3.28712   ACACCCGTCTTCCGA                GCGTT AGC GGCGC                TTCTCGCCGCGGCAG  47 19
        prfA NONE
   Bphy_2722 3078886 .. 3078899 +  -5.2  -3.09766   AGCCATCGGTCGTGA               GCGG CGAAAT CCGC                TATCATTTGTCTCTA  46 76
   Bphy_2723 NONE
   Bphy_2724 3079986 .. 3079999 +  -2.4  -2.92475   TGCGGCCTTATATTC               GGTT CAAGCT AACC                CTTTGTCGCACTGCC  40 119
   Bphy_2725 3080837 .. 3080858 + -17.3  -4.06864   CGCGCAAACTAAAAA           GCCCGCCAG AATT CTGGCGGGC            TTCTTCTTGTGTCAG 100 62
   Bphy_2727 3083173 .. 3083201 + -12.6  -4.60041   CTTTCTTCCGGAACG       C-AAAAACCCCGC CTCG GCGGGGTTTTTTG        TTTTTCGGCCTCAAT 100 47
   Bphy_2729 3086555 .. 3086586 + -16.6  -3.26947   ACACCAACGACAGCG      CCGCTGCGC-CCGCA TCG TACGGCGCGCAGCGG      TTGATCTCGCCCTTC  89 352
   Bphy_2732 3089181 .. 3089191 +  -3.2  -3.08073   GTTTTGCTTTCGCAC                 TGGC ACC GTCA                 TGTCTTCGCCCTCCT  43 43
   Bphy_2733 3089802 .. 3089829 +  -7.7  -3.55622   GCCTCCGCGTAGAAG        CGCTCGCGCAAC TCCGT GATGC-CGAGCG        TTTCCAGCACTTCAC  62 67
   Bphy_2735 3091369 .. 3091404 +  -3.2  -4.13995   CAGCCGACATCTTGC    GCCGTTCATTGCGGC TCGCGTT GCCGCGC-GGATGGC    TTTGGTTTCTCGGCC  59 70
   Bphy_2737 3093800 .. 3093833 +  -5.1  -3.53012   GAGCGCGCGCGGGTC     CTGGTCCGTCGCGACG ATG CG-CGCGACGCCCCGC     TTTGCAAGCACCGCC  53 489
   Bphy_2745 3101036 .. 3101061 + -14.1  -5.17744   GCACGCAAACAAAAT         GGGCAGT-CTCC AAC GGAGCACTGCCC         TTTTTGTTGCTGTCT 100 65
   Bphy_2775 3125812 .. 3125830 +  -7.3  -4.07568   GGTCGAATGCGCGAT             GCCCGCG ACGGG CGCGGAC             TTTTGCAGAGAGGCC  68 60
   Bphy_2776 3126634 .. 3126655 +  -6.6  -4.57073   CGCATCGCGCGCTAA           GCGTACGTC CTCCA GACG-ACGC           TTTTTCGACAACCTG  76 26
   Bphy_2777 3127331 .. 3127356 +  -3.9  -3.71917   TTTGTCTGGCATCTT         TGTCGCCGGCA TCTT TGTCGCTGGCA          TTTGCGATTTGCCGT  54 90
   Bphy_2778 3128658 .. 3128693 + -14.6  -2.64616   GCCGCGCCAGACGCG    CTGCCGTGCCCGTCGA TTTG TCGGCGGCCTCGGCGG     TGATGTCGCTCGCAC  74 435
   Bphy_2783 NONE
   Bphy_2784 3132793 .. 3132824 +   -13   -5.1861   CGGCGCCTCCCTGTT      CGGTCCGTCCC-GCT GCC ACCTGGGACGGGCCG      TTTTTTCCTGGTGCG 100 142
   Bphy_2790 3143241 .. 3143266 + -10.3  -3.41073   TTCGGGCTTGAACAA         CGCCGGTTCGC AAAA GCGTGTCGGCG          TATTTCCATGCAATC  68 62
   Bphy_2791 3144001 .. 3144054 +  -7.7  -3.64703   ACCGGATATCGGATC GCTGCGAAGGACGGAAAGCGGCGCATGC TTT GCA--CGCCGCTTTCCA-C-TTCGC-GC TTTGCATCGCGCAGA  64 89
   Bphy_2799 3153892 .. 3153916 + -21.5  -4.98531   GCTCCCTGAAAAAAA          GCCGCCGCGTA TTG TACGCGGCGGC          TTTTTACTTTCCGCG 100 49
   Bphy_2801 NONE
   Bphy_2802 3155933 .. 3155957 + -12.9  -5.29846   CGCTCACAGTCAAAA          GGCGATGCG CTCATCA CGCATCGCC          TTTTTGTTTCCGGTT 100 57
        engB 3163177 .. 3163187 +  -8.2  -2.51133   GAAGCGGGGAGGTCA                 GCGC TAG GCGC                 CTTGCTCGATCGGTA  52 154
   Bphy_2809 3164340 .. 3164367 +  -8.4  -3.84985   CGACAGTGACTGCAA        GCGGAGG-GGTCG ACC TGACAGCCTCCGC        TTCTCTCTTTTAATC  67 92
        paaA NONE
        paaB NONE
   Bphy_2859 NONE
   Bphy_2860 NONE
   Bphy_2861 3213508 .. 3213550 + -23.5  -4.37506   ATCCGCTTACACTAG GGGCCGCTCGCTACAGGAA GGATG TTCCTGCTGCGAGCGGCCC TTTCTGTTTCCTGGT 100 117
   Bphy_2862 NONE
   Bphy_2863 3215060 .. 3215091 +  -3.6  -3.01791   GTCGACCTCGCCAAG      GTGACG-TTCGGCGC TCG GCGGCGAATCGATGC      TGTTGCGCAGCAACT  43 22
   Bphy_2864 3216009 .. 3216032 +   -16  -5.27335   GACAAACACCAAAAA          GGGCGGCTCT TCAA GGAGCCGCCC           TTTTTGTTTGCCCGC 100 54
   Bphy_2866 3217890 .. 3217914 + -15.7  -4.66537   GGTGGCAAAGAAAAA          GGCGAGGACCG ATT CGATCCTCGCC          TTTTCTGTTCGGAAG 100 72
   Bphy_2868 3222141 .. 3222158 + -10.5  -4.63527   TGTGGCAAAGAAAAA             GGGCGCC TTGC GGTGCCC              TTTTTCACGTCATCG  89 51
        pyrE 3227085 .. 3227111 + -22.4  -5.49234   GCCTGCATACGAAAA         CGCCGCCTGTCT TGA AGACAGGCGGCG         TTTTTTATTGCGTAT 100 77
   Bphy_2873 3228753 .. 3228774 +  -2.1  -4.07687   CATGATCGTCACGTA           CGGCCGCTA GAAT TCGTCGCCG            TTTTAGGAGCGGCGT  57 16
   Bphy_2874 3229493 .. 3229512 +  -7.2   -4.8543   CTGTCACGCCGCTGT            CACTGTTGC GGC GCAAC-GTG            TTTTTCTGCCGATTC  85 71
   Bphy_2875 3230608 .. 3230627 +  -7.8  -5.33026   CCCGCACACGACAAA            GCCGGC ATTCACGC GCCGGC             TTTTTCTTTGGCTTA 100 68
   Bphy_2878 3233720 .. 3233735 +  -3.2  -3.76413   GCGATGCGTACAATG              CGGG ATTGCTTA CCCG               TTTGAGGTTTTCCGC  54 84
   Bphy_2879 3234110 .. 3234131 + -15.9   -5.5112   ACCCGAAATGCAAAA           GGCCGAAGC ATCT GCTTCGGCC            TTTTTTATTGCTGCG 100 97
   Bphy_2881 3235684 .. 3235715 + -12.2  -2.71712   ATCTCATCGGATTCG      GCGGAGCCTGCCTG AACG CAGGCAGGCATGGC       GTTTCCCGAAACCAG  69 11
   Bphy_2884 3239492 .. 3239506 +  -4.2  -4.93696   CTGCCAAAACGCCGC               CCCATC CTT GATGTG               TTTTTGATGTTTCGG  81 252
   Bphy_2885 NONE
   Bphy_2886 3242418 .. 3242452 +  -3.6  -3.25202   CTGCGGATCCAATCG    GCG-GAAGCGAGG-GC CATTT GCGCCTCATTTCGCGC    GTTTGTTTGCCCGTG  45 490
   Bphy_2888 3243346 .. 3243373 +  -5.4  -3.63627   CTGGATGACAAGCCG        ACCGCCGCTCGCG CTC CGCG-GCGATGGA        TTTGACCTCTGACGC  57 262
   Bphy_2889 3244488 .. 3244525 +  -8.4  -3.27476   AGGATCGGCGACAGC   GGGCCGTA-GTGTTCCG GCATG CGGATCACGTGCAGCCC   TTCGTCGTTGACGAT  59 255
   Bphy_2895 NONE
   Bphy_2896 3251776 .. 3251815 + -12.8  -3.33696   TCACGCGATGGATGT  TGCCGTGCTCGCGCGC CACCAGCA GCGCGAGATCGCGGCA   TTCGTTCGGCACGCG  77 349
   Bphy_2901 3257274 .. 3257307 +    -3  -3.91084   TTGCGCATCAACTGC     GCCGCCTCCCCGAT CTGCTC ATTGGTGAGCCCGC      TTTCCTTCAACGTCG  56 251
   Bphy_2903 NONE
   Bphy_2904 NONE
   Bphy_2905 3260423 .. 3260443 + -15.4  -3.53012   TCAGGCATCAGTCGA            CGCCCCGC TTCAT GCGGGGCG            TTTGCCAAAAGCGAC  93 54
   Bphy_2906 NONE
   Bphy_2907 3262562 .. 3262585 + -13.2  -2.61322   GTTCACAGTCAACGT          CCGGCGCATCA ACG TG-TGCGCCGG          CTCTTTCGAGAGTCT  72 199
   Bphy_2908 3263497 .. 3263507 +  -6.8  -4.07885   GGTGCAAGGTCCGCA                 CGTC CGC GACG                 TTTTCCGCGGGCGTC  68 297
   Bphy_2922 3278527 .. 3278552 + -14.7  -2.62933   CGCTGAAATAGAAAA         TGCCGCACGGT CTGC ACCGGGCGGCA          TGCTGTCCGGCGTTG  76 30
   Bphy_2924 3282628 .. 3282649 +    -5  -3.76373   GTTGCGCGAGCAACG           CGCCGCGT ATCTGC GCGCGCCG            TTTCCGTCTTGGGAA  57 129
        fliF NONE
        fliG NONE
        fliH NONE
   Bphy_2934 NONE
   Bphy_2935 NONE
   Bphy_2936 3293955 .. 3293977 +  -2.5  -4.66833   CGTTGTTGGCGTTGG           CGCATCCGC TCCTT GCGGTGGTG           TTTTTAGCGTTGCCC  68 70
        fliL 3294840 .. 3294865 +  -2.5  -3.92324   CACTGAATTCGTCGT         CCAGTAACGCGC CTA GCGC-TGACTGA         TTTGATCTTGAACCG  54 19
        fliM NONE
   Bphy_2939 NONE
   Bphy_2940 NONE
        fliP 3297813 .. 3297825 +  -4.8  -3.54408   GCTGATCGTCGGTTC                GCTC GCGCA GAGC                TTCGTTTAAGTCCAG  52 4
   Bphy_2942 3298115 .. 3298137 +  -6.9  -3.92809   TGTTCACGAGCATTC           CGACGCTCG CCGGC TGAGCGCCG           TTCTCTTTCCTTCTT  65 9
   Bphy_2943 3299019 .. 3299032 +  -4.5  -4.43911   GTTCGGTTTTGGGTT               CGCTGG CAT CC-GCG               TTTTGCTTCCGGTTT  70 96
        flgB NONE
        flgC 3302889 .. 3302899 +  -6.8  -3.05384   ACGATCGGAACCTGA                 GGAG AAG CTCC                 TTGACTACCAGCACC  52 26
        flgD 3303592 .. 3303604 +  -4.7  -2.68942   AACGGTTGGCCTGTC                GACGG TCG CCGCC                ATTATCTAAACGCAT  43 4
   Bphy_2951 NONE
        flgF NONE
        flgG 3306757 .. 3306767 +  -2.4  -3.57263   GCTGCAGACGCTCAG                 CCAG ATG CCGG                 TTTAAGGCTGACAGT  49 10
        flgH NONE
        flgI NONE
        flgJ 3309806 .. 3309835 +  -2.8  -4.16016   GTCTCTTCCATTTGT       CCGGATGCGC ATTGAGTTTC GCGTATCCTG        TTTGTTGCGGCGTCA  60 178
   Bphy_2957 3310927 .. 3310958 +  -2.1  -4.86731   TTTTGCTTCTGGTTG      GCTGGCGTTGCCCC TGTGC GGGGC-ACACCTAC      TTTTCTTTGCCGCGG  72 155
        flgK NONE
        flgL 3315044 .. 3315072 +  -3.7   -5.1971   ACTTCGTCTCGGCGA        CGCCTGGCTCTTT TTT GGAGGACTGGGCG        TTTTTGCTTTTTGCT  84 61
   Bphy_2980 3339507 .. 3339524 + -10.5  -5.10933   CGCTTGCACTAAAAA             GCCGCCT CCCC GGGCGGC              TTTTCTTTTCCGTCG 100 129
   Bphy_2982 3341068 .. 3341097 + -17.9  -3.59202   CTATCCAGTCTGCGT       GAAAACGGGGCGC TTCG GCGCCCCGTTTGC        TTGTATGTCCAAATG 100 48
   Bphy_2985 3344014 .. 3344027 +  -9.5  -3.72984   GCCAACACAACGGCT               GGCCC TTTT GGGCC                TTTCGCTCGTTATAA  71 237
   Bphy_2986 3344747 .. 3344794 + -14.3  -2.92613   TTCCAAAGTTCCAAA CGAAAAACGGCGGTGTG-GCTTC TTTC GAAGCTCACACCGCCGTTGG-CG TGCTTTCGCGTGGAA  79 91
   Bphy_2989 3347401 .. 3347431 + -12.7  -2.71712   AAAAACAGCTGGATC      GCATGGTTGGGAGG CTCG CCTCCC-ATCATGC       ATTTGAACGCCGAGA  69 114
   Bphy_2990 NONE
   Bphy_2991 3349294 .. 3349309 +    -9  -6.06723   GCGCGGATTGACAAA              GCTGCA GCGA TGCAGC               TTTTTTTTTCGCCCG 100 85
   Bphy_2999 3362909 .. 3362927 + -11.7  -5.56673   TCCGGCACACAACAA             TCCCCGC CCTGT GCGGGGA             TTTTTTCTTATGCCT 100 55
   Bphy_3001 3366480 .. 3366515 +  -6.2   -4.3898   TCTTGCTCCCGCCTC   TGTT-GCGCCCT-CGG TCGCTT CCGCAGGGCGCGAACC    TTTTGTCCCGCTGAT  71 93
   Bphy_3002 3366923 .. 3366968 +   -14  -5.78622   ATCGCGTGCGCCTGC TGCCGCACGGCG-CGTACGCCG CCTG CCGCGCGCGTCGCC-TGCGGCA TTTTTTTTGAAATCA 100 46
        gcvT NONE
   Bphy_3004 NONE
   Bphy_3005 3372105 .. 3372145 + -21.4  -3.64703   TGCAACAGCAGACAT  GACAAAACCCGGTGACGA TCGAC TCGTCACCGGGTTTTTTC  TTTGCATCGCGACGG 100 71
   Bphy_3013 3380953 .. 3380981 + -13.7  -3.34517   CGCGTTGGTCGCAGG        CGGCGCGGGCGCG GGC CGTGCCCGCCGCG        TGTTTCGCCGCCCGT  81 194
   Bphy_3014 NONE
   Bphy_3015 NONE
   Bphy_3016 3385449 .. 3385463 +    -7  -4.08216   CGCGGCGAATAAGCA               GGAGCC ACG GGCGCC               TTTTGGGGCCCGTGG  68 29
   Bphy_3019 3391735 .. 3391747 +  -3.3  -3.01712   TGCGCGGACAGCGCG                TAGCC GAT GGCGA                TATTGACGGCCACGC  42 375
   Bphy_3024 3398121 .. 3398158 +  -8.2  -3.14132   ACTCGTTGCTTGAGC   GCGCTCGCCTGCACCG GAAGTG CGTAGCAGGCGCCCGC    TTGATGCGGCGGCGC  57 104
   Bphy_3052 3430983 .. 3431006 +    -3  -3.81488   CATCGACGGCGGTCC          CGTCGTCGTC AGAA GCCGATCACG           TTCTCTTTCGACAGG  52 258
   Bphy_3053 3431614 .. 3431633 +    -5  -3.14468   GCGCCAGATGACCGA            GCGGCAATG GCC CGTTGC-GC            TTGAATGTCGTCAGA  47 79
   Bphy_3055 3432835 .. 3432859 +  -4.2  -3.05715   GCATTCTGTGCAGCA         GGCGCAC-CGG CGAA CCGCGTGCCTC          TTGCCTAAACCCATT  46 414
   Bphy_3057 3433624 .. 3433666 + -23.5  -2.90075   GTCCGGGTTGTCCGA CGGGCGGCCGCAAGCGCATC CGCG GATGCGCG-GCGGCCGCCTG TGTCATTCAACCCGG 100 71
   Bphy_3058 3435341 .. 3435392 +  -7.9   -3.4382   TCTTCTCGTCTTTCT TGTC-CGGCGGCGCAAGCATCGTGC CGCG GCACT-TGCGCGCGCCGCAGCGGCA TTCGTATTCCTTCTT  60 114
   Bphy_3067 3446279 .. 3446293 + -12.8  -5.90981   CTTGAGTTGTTGACA               CCCGCC GTT GGCGGG               TTTTTTTTCGTCTGC 100 51
   Bphy_3070 NONE
   Bphy_3071 NONE
   Bphy_3072 3454046 .. 3454076 +  -8.9  -2.70932   GTGCTGCCTAACGAG      ACGGCGCGGGGCGG TTCG CCGCCC-GTGCTGA       TGATTGCAGCGGCGC  53 259
   Bphy_3074 NONE
   Bphy_3075 NONE
   Bphy_3076 NONE
   Bphy_3077 NONE
   Bphy_3078 NONE
   Bphy_3079 NONE
   Bphy_3080 NONE
   Bphy_3081 3460559 .. 3460586 + -19.2  -4.18018   CGCTCCAAAACACGA        CGGCCGCCATGT TTGC GCATGGCGGCCG         TTTTGCGTCGCGCGG 100 52
   Bphy_3089 3469002 .. 3469013 +  -2.2  -4.11773   AAAGGGCCCCCGATT                TCGG CAGC CTGA                 TTTTCAGCCCTGTTT  57 14
   Bphy_3092 3471770 .. 3471786 +  -3.7  -3.62046   TGGCTACCAACACGC              CTACAAT GGA ATTGTCG              TTGTTGCAGCGATCA  51 128
   Bphy_3093 3472064 .. 3472081 +  -9.9  -2.53995   TGGCTGTTCAGCTAG             CGCTGAT TCTG ATCAGCG              TCGATTGACCTACCT  60 110
   Bphy_3094 3472769 .. 3472805 +  -9.6  -2.91264   GGTGAGCTCAGGGCA   TTG-TGCAATGGTGGTC TGCT GGCCACTATTGCAGCAG    TGTGTACCTAAAGCA  59 76
   Bphy_3097 3476433 .. 3476454 + -14.4  -4.32046   CAAGACGTAAAAAAA           CCGCCCGG CTGAAA CCGGGCGG            TTTGCTTTTTCGGCA 100 49
        rpmH NONE
   Bphy_3100 3478482 .. 3478514 -  -4.5  -3.14683   ACAGTGGCGCACCAA      CGCTGCGTGGCTCTC ATG GCGTGCCGGGCGGCG      CGCCCGCCGCCGACG  48 6
   Bphy_3099 NONE
   Bphy_3098 3476433 .. 3476454 - -15.1  -5.52909   CAAGACGTAAAAAAA           CCGCCCGGC TGAA ACCGGGCGG            TTTGCTTTTTCGGCA 100 79
        trmE 3474157 .. 3474167 -  -3.2  -4.07885   GAGGCGCGCGGAAAA                 CGCA GCT TACG                 CGTTTGTGTACCGAA  59 95
   Bphy_3095 3472923 .. 3472945 -  -2.7  -4.65895   TTGTGTACCGAAAAA           GGAACTGAC GAGTG GTCAATTCG           TTTAACCTCGGCCCG  68 27
   Bphy_3091 3470036 .. 3470060 - -14.3  -3.67481   TCAGACAGAAATGAA          GTGGCCGGACT AAG AGTCCGGCCAG          CGCGAACCGATAAAG  90 121
   Bphy_3090 3468874 .. 3468913 - -12.8  -3.53811   CTGATGCGCTCGAAA  GCTGGCTCGCCG-CGCGCA ATG TGCGCATCGGCGAACAGGC  GACACGCTATGGTGC  78 174
   Bphy_3088 NONE
   Bphy_3087 NONE
   Bphy_3086 3464241 .. 3464260 - -10.7  -5.14563   CGCGCCACGAAAAAA            GGGCAGC GTGAAA GCTGCCC             TTTCGCCATTCGTCG 100 73
   Bphy_3085 NONE
   Bphy_3084 3462701 .. 3462739 - -15.2  -5.05228   ACGAAAGCACAAAAA   GGCGCGGCGGCGTCAATG GGT CACCGACGCCGCCACTTC   CGGTACTTCAACGAA 100 45
   Bphy_3083 NONE
   Bphy_3082 3460554 .. 3460591 - -15.6  -4.07568   CGGGCCGCTCCAAAA   CACGACGGCCGCCATG TTTGCG CATGGCGGCCGTTTTG    CGTCGCGCGGATAAC 100 49
   Bphy_3073 3453515 .. 3453557 - -12.7  -3.50393   CGCGATGCGAGACAA CATCGACGATGCCATCGTGC GCGT GCGCGAAGGCA-CGTCGCTG TCGCGTGCGCTCGGC  78 375
   Bphy_3069 3447737 .. 3447755 -  -4.4  -3.90112   CGCTCGTCAACGAAA             CTGACCGA CTA TCGGGCGG             GCATCAGGTTCCACT  59 15
   Bphy_3068 3446036 .. 3446050 -    -7  -3.61764   CCAGCAAGGCTCAAA               CCGGCG AAA CGCTGG               ACACGCTGCTTGAAG  59 323
        mnmC 3443263 .. 3443274 -  -5.8  -3.61398   CTGGCTTCTCAACAA                CAGG TTTA CCTG                 TATGTATACGTAGTA  57 290
   Bphy_3065 NONE
   Bphy_3064 3440103 .. 3440117 -  -8.5  -5.80003   CGAAGAAATAAAAAA               CCCGC AAGAA GCGGG               TTCAGTCGAGGTTTG 100 99
   Bphy_3063 3438808 .. 3438830 -  -7.7  -3.04144   TGCCGATGCGCAAGA          CGGC-GCAAG CTCA CCTGCTGCCG           TTCGCGAGTGTTCGC  56 72
   Bphy_3062 NONE
   Bphy_3061 3437208 .. 3437242 -  -3.5  -2.81133   GAGCGATCGAGCATA    GCACCCGGTCCGATTTG CTG CAGA-CGG-CCTGGCGC    GCCGCGTCATGACCG  41 58
   Bphy_3060 3435895 .. 3435917 - -17.7  -3.83502   GATGCGGATAGCAAA           CGCGGCGCC GTGCT GGCGCCGCG           TCGACACGTGACGCA 100 160
   Bphy_3059 3435226 .. 3435241 - -11.8  -6.02919   CGAGAAACAAAAAAA              CCGGCG CATG CGCCGG               TCGATCTCTGAACTT 100 90
   Bphy_3056 3432179 .. 3432191 -  -7.7  -3.93963   ACGATGATCGAGAAA                CTTCC CTC GGAAG                AACGTGCGAGCCAGA  69 378
   Bphy_3054 3431054 .. 3431089 -  -5.9  -4.10159   AACATCGAAATCAAA    GCCCGCGCGCAGCAG TTCGAG CAGCTTCGCGAGCGC     GCCGCCGCCCTTGCG  66 515
   Bphy_3050 3426239 .. 3426261 -  -6.3  -3.14132   GGCGTGGTGCACCAA          TGCGG-ACGG TAAT CCATGCCGCA           CCACGCAGCATGGCT  50 134
   Bphy_3049 NONE
   Bphy_3048 NONE
   Bphy_3047 3423211 .. 3423258 -   -15  -3.84451   GTCGTCAAAGTGAAA GCG-GCATGCACGTGTCAGGCC GGCGAT GGCCCGACACGTCCA-GCACGC AGAACATCGACGCCC  93 86
   Bphy_3046 NONE
   Bphy_3045 3421074 .. 3421100 - -14.5   -5.1417   GCAGAAAAGTAAAAA         GCGCTGCTGGA GCCAG TCCAACAGCGC         TTTTGTATGGGCACT 100 258
   Bphy_3043 3418121 .. 3418148 - -15.6  -4.45187   AAACACATAAAACAA        CTGCCGCGCC CAAGATAC GGCGCGGCAG         AGCTTGCCATTGTTA 100 121
   Bphy_3042 NONE
   Bphy_3041 NONE
   Bphy_3040 3414355 .. 3414380 - -17.7  -6.48081   GGCATAAAAAAAAAA         CGGCGTGTTTC ACGT GAAACACGCCG          CTCATTTGACAGCGA 100 62
   Bphy_3039 NONE
        gidB NONE
   Bphy_3037 NONE
   Bphy_3036 NONE
   Bphy_3035 3408552 .. 3408568 -  -2.1  -3.68073   TAGGCCAGCCAATAA              CCGGCGT GAA ACGGCGC              TTCAGGATACGGGAA  49 162
   Bphy_3034 3407804 .. 3407837 -  -2.3  -3.02511   TGTATTGCGGGAACA     CGCCAGCGCGGGCT TCTGTCC AACCCGCGC-GCCT     CGTTACTGACGCCTT  41 66
   Bphy_3033 NONE
   Bphy_3032 3406423 .. 3406466 -    -6  -3.57462   GATCGGAGGGGGAAA CGGCAAGGCGCTCATCGA TTCAGTGG TCGATCAGCGCCTTAGTG CCCGTTCCGCTTTGC  57 83
   Bphy_3031 NONE
   Bphy_3030 3405360 .. 3405380 -  -3.2  -3.30124   TGCCAGCCGCCACAA            CCACGTGA GGGCT TCAGGCGG            TCAGAGCCGTCTGCA  47 18
   Bphy_3029 3403702 .. 3403735 - -10.9  -3.05384   TGCTCCTTGATCGAA     GCAGCGTTACCGCGC TTTC ACGCGCCCACGCTGC      TTCAAGGTCCGTTTA  68 63
   Bphy_3028 NONE
   Bphy_3027 3401274 .. 3401289 -  -7.5  -2.70932   TTGCGGCGGCAACCA              GGCGC GAGCCG GCGCC               CGCTTCGTTACACCC  50 46
        atpC 3400701 .. 3400717 -  -9.4  -5.77853   AATCGGCAAAAAAAA              GCAGCC ACGAG GGCTGC              TTTCGATTGTGCTGC 100 41
   Bphy_3025 3398745 .. 3398767 - -14.9  -3.84451   CGCCTGAAAGCGAAA           CGCCGTGTG GCCTG CACACGGCG           TTTTTGGTGTTTGCG  93 59
        hemE 3395864 .. 3395876 -  -6.3  -3.33737   GACGAATGTGCATAA                GTCAA GTC TTGAC                AATGCGAAGAGAGCC  52 129
   Bphy_3022 3393197 .. 3393211 -  -4.3  -3.54543   AGCGATCTCGCCAAA               CGAAA CGACC TTTCG               TTTGATCGATATGAC  52 94
   Bphy_3021 3391665 .. 3391693 -    -3  -3.28712   TGCGGTCGTCGAGAA       CGGCGGCCGCGCT CACG AGCCCTGCC-CCA        AGCTATTCCAATACG  44 9
   Bphy_3020 3390997 .. 3391027 - -10.4  -5.06414   CCCTCCCAATAAAAA       GGTGCAACCAGTTC GGC GAGACGGTTGCACC       CCTCTGAAAGCCTTA 100 439
        putA 3386942 .. 3386960 -  -5.2  -2.52676   CATTTTTTGAATCGA             TCGAGCGA GGT TCGCTCAG             CCGATCGTCATCAAA  42 22
   Bphy_3017 3385633 .. 3385660 -   -12  -5.47846   AAGCAAAAAACAAAA        GCCTCGCAGAGC AAAA ACCCTACGAGGC         TTCCACAAAATCAGC 100 86
   Bphy_3012 NONE
   Bphy_3011 NONE
   Bphy_3010 NONE
   Bphy_3009 NONE
   Bphy_3008 NONE
   Bphy_3007 NONE
   Bphy_3006 3372112 .. 3372138 - -18.1  -4.53163   GCAGACATGACAAAA         CCCGGTGACGA TCGAC TCGTCACCGGG         TTTTTTCTTTGCATC 100 54
   Bphy_3000 3362909 .. 3362927 - -11.7  -3.88232   TCCGGCACACAACAA             TCCCCGC CCTGT GCGGGGA             TTTTTTCTTATGCCT  82 33
   Bphy_2998 NONE
   Bphy_2997 3358311 .. 3358321 -  -2.4  -2.75844   TCTGTCATGCGAAAT                 TGCG CTC CGCG                 GCGTGGCGGGCGTCC  39 4
   Bphy_2996 NONE
   Bphy_2995 NONE
   Bphy_2994 NONE
   Bphy_2993 NONE
   Bphy_2992 3349294 .. 3349309 -    -9  -3.91897   GCGCGGATTGACAAA              GCTGCA GCGA TGCAGC               TTTTTTTTTCGCCCG  73 122
   Bphy_2988 3345185 .. 3345212 -  -6.2  -3.57462   GAGTTCACCGCGAAA        CGCGGGCAGCGCA CGT TGCAGCG-CCGCG        CCTAGCTAGCGTTTC  57 137
        rpsU 3344754 .. 3344788 - -20.9  -4.98531   GTTCCAAACGAAAAA    CGGCGGTGTG-GCTTC TTTC GAAGCTCACACCGCCG     TTGGCGTGCTTTCGC 100 53
   Bphy_2984 NONE
   Bphy_2983 3341073 .. 3341092 - -16.4  -4.07885   CAGTCTGCGTGAAAA            CGGGGCGC TTCG GCGCCCCG             TTTGCTTGTATGTCC 100 179
   Bphy_2981 3339507 .. 3339524 -  -9.8  -4.72272   CGCTTGCACTAAAAA             GCCGCC TCCCCG GGCGGC              TTTTCTTTTCCGTCG  89 205
   Bphy_2979 3337275 .. 3337290 - -11.8  -4.26189   CGAGAAACGGTAAAA              GCGCCG TCGC CGGCGC               GCGTAGGGTGGCTTG  89 82
   Bphy_2978 3336465 .. 3336482 -  -6.9   -4.2558   GAGCCCTCACGAAAA             GCGACGG GAGA CCGTCGT              TATTCAGGTTTACGG  71 149
   Bphy_2977 NONE
        motB NONE
   Bphy_2975 NONE
   Bphy_2974 NONE
   Bphy_2973 NONE
   Bphy_2972 3329132 .. 3329168 -  -8.6  -3.19192   CGTGAGCGAACCCAA   CGCCCGCTGCGCCTGCG CGTT CAC-GACGCATCGCGCG    AAAACGTCCGTCTCG  57 81
   Bphy_2971 NONE
   Bphy_2970 NONE
   Bphy_2969 NONE
   Bphy_2968 NONE
   Bphy_2967 3324580 .. 3324594 - -11.4  -2.76964   CGACAGCGAACAGTA               CCCGCA ATA TGCGGG               CCCGGCTTATTGGTT  65 327
   Bphy_2966 NONE
   Bphy_2965 3322595 .. 3322638 -    -3  -2.53876   GGGTATTTCAAGCGA TGGGCGGGCACTGCGCGCGG CCCGAC CCGCAGGC-G-GACCGCCGA CTGAGATGGCGGCCC  37 79
        flhB NONE
        flhA 3319038 .. 3319068 -   -16  -3.53091   ACCCGCGCCGCGAAA       CGGGCGCGGCCTCC ATC GGGAGCCGCGCGCG       CCAGTGAAGAAGGCC  93 130
        flhF NONE
   Bphy_2961 NONE
        fliA 3315260 .. 3315285 - -16.3  -4.29472   CAAACCAAAACCAAA         GAGCCGATCTT AAAA AAGATCGGCTC          TCGAAGAAACGATTT 100 65
   Bphy_2947 NONE
   Bphy_2946 3299867 .. 3299884 -  -4.7  -2.71125   ATTTGTCACAAATAC             CGCCCCG CACC CGGCGCA              CCGTTCATCGATGCG  43 44
   Bphy_2945 3299282 .. 3299300 - -10.2   -4.4267   CCTCAAAATGCAAAA             CCGGCACC AAA GGCACCGG             TCCGGTAAACAGCAC  87 84
   Bphy_2930 3286124 .. 3286174 -  -6.7  -3.14132   CGGCGCTCTCATGAA GCAGC-CGCGCGTAACGCAGTGGCG ATG CGCGAC-GCATGTCCCGCGCGCCGC CCAGAGGAAAGGCGG  54 79
   Bphy_2929 NONE
   Bphy_2928 3285088 .. 3285098 -  -8.2  -3.56594   TGAAACTGCGTGAAA                 GCGC TCA GCGC                 GCCTGGTAAAGTTCT  64 19
   Bphy_2927 3283644 .. 3283657 -  -2.4  -2.78384   GTGCGGCTCATTACA               TGTC CCAGTC GACA                TCATGGCTGCCGGCG  39 7
   Bphy_2926 3282846 .. 3282864 -    -8  -3.73968   AAACGCTGGATGAAA             GCGCAGCG GCG CGCCGCGA             ACAGATGGCTGCTGC  67 462
   Bphy_2923 3278527 .. 3278552 - -14.7  -4.78848   CGCTGAAATAGAAAA         TGCCGCACGGT CTGC ACCGGGCGGCA          TGCTGTCCGGCGTTG 100 60
   Bphy_2921 NONE
   Bphy_2920 3276163 .. 3276183 -  -4.5  -3.67188   ATTCATCCCAAAATA            GTCCCGGTG CAG CGCCGAGTC            AAAACACGGCGCAAT  54 54
   Bphy_2919 NONE
   Bphy_2918 3273573 .. 3273611 -  -4.4  -3.06796   CGTCACCCGATGCAA   TGCGTCGCATCGGCTG CGTGCTT CATCCGGTGCGGGGCA   CGCCGTGGCATGCGC  46 70
   Bphy_2917 NONE
   Bphy_2916 3272245 .. 3272271 - -13.7  -5.56673   ACGCACAATAAAAAA         GCGGCGCACGC CTGGC GCGTACACCGC         TTCTCACGTCGGCCA 100 47
   Bphy_2915 3270367 .. 3270391 - -17.1  -3.48395   ACCCGCCGGATACAA          CGCTGCCGCGC CAA GCGCGGCAGCT          GTCTCGAATTTGAAC 100 69
   Bphy_2914 3268500 .. 3268532 - -14.8  -3.55457   TGAGAAAAAACGCAA      CCGGCGACGAGGGC TCGTG ACCCCGGTCGCCGG      ACCATTTCGACCAGT  90 111
   Bphy_2913 NONE
   Bphy_2912 NONE
   Bphy_2911 NONE
        dppF NONE
   Bphy_2909 3263200 .. 3263210 -  -5.4  -4.07687   ACGTCCGTCTGAAAA                 CGAA CGG TTCG                 CCAGCCCGTCAATAA  65 34
   Bphy_2902 3257169 .. 3257187 -    -8  -5.40474   AGCGGGCGAAAAAAA             CGGCGACG CGG CGCCGCAG             GCAAGCACCGCAGGC 100 48
   Bphy_2900 3254360 .. 3254373 -  -5.9  -3.05596   GACTCCCTGATGGAA               GCCGC GGCA ACGGC                TGAGGTTCGAGCGCC  49 84
   Bphy_2899 NONE
   Bphy_2898 NONE
         cca 3251456 .. 3251472 -  -2.1  -2.70932   CGGCTGCTTTAACTA              CGCTTGC CCG GAAGGCG              CTTCGTTCAGCGCTT  39 6
   Bphy_2894 NONE
   Bphy_2893 NONE
   Bphy_2892 3247594 .. 3247608 -    -5  -3.28712   TGCCTGCCGCCAGAA               TCACGA TGT TCATGA               CGTGGGCGTATTTGA  49 133
   Bphy_2891 NONE
   Bphy_2890 3244296 .. 3244316 -  -2.6  -4.04671   AGAAGAAGAGAAGAA           CTC-GAACC GGCC GGTTCTGAA            TACGTCCGCGATTGC  57 79
   Bphy_2887 3242145 .. 3242175 -  -2.4  -2.82505   ACTGCATACTGAAAC       GGTGAACTCGGC TGCTAGT GCCGAGTGCTGC       TACTTCTACGGCAAC  39 357
   Bphy_2883 3236402 .. 3236452 -  -2.5  -3.11302   GCAACAGGTGAAAAG GCCGCGCGGCGCGTGAAATGGCATT GAA AATGC--TGTCATCCGTCGTGCGGC GCTTCGGCAAAACGT  41 40
   Bphy_2882 3235491 .. 3235511 -  -5.4  -4.07568   GGTCGTCGCGCAAAA           GCACGCCGC ACCA GCG-CATGC            AGCCGTGATTTTCAG  64 258
   Bphy_2880 3234110 .. 3234131 - -15.9  -4.35926   ACCCGAAATGCAAAA           GGCCGAAGC ATCT GCTTCGGCC            TTTTTTATTGCTGCG 100 87
   Bphy_2877 3231816 .. 3231848 - -24.9  -5.47159   GCTGAAGAGAAAAAA      CGGGCGGGACGGACA TTA TGCCCGCCCCGCCCG      TTTCGACGCCGGTTC 100 112
   Bphy_2876 3230929 .. 3230947 - -13.8  -5.81412   GCCAGGCAAAAAAAA             GCCCGCCA AGG CGGCGGGC             TGAATCCATATCAGA 100 208
   Bphy_2872 3227085 .. 3227111 - -22.4  -4.34402   GCCTGCATACGAAAA         CGCCGCCTGTCT TGA AGACAGGCGGCG         TTTTTTATTGCGTAT 100 86
   Bphy_2870 3224498 .. 3224512 -  -4.2  -3.66844   GCGAGACGTTAATAA               TTGGGC CCG GCTCAA               TGTCACGTGCTGCGC  54 283
   Bphy_2869 3222141 .. 3222158 -  -8.3  -5.27335   TGTGGCAAAGAAAAA             GGGCGCC TTGC GGTGCCC              TTTTTCACGTCATCG 100 55
   Bphy_2867 3217890 .. 3217914 - -17.9  -5.27335   GGTGGCAAAGAAAAA          GGCGAGGACCG ATT CGATCCTCGCC          TTTTCTGTTCGGAAG 100 90
   Bphy_2865 3216000 .. 3216041 -   -16    -4.208   CGGCAAAACGACAAA CACCAAAAAGGGCGGCTC TTCAAG GAGCCGCCCTTTTTGTTT  GCCCGCACGCCTGAC 100 60
   Bphy_2856 3207746 .. 3207763 -  -2.7  -3.78312   AAATCACTGACGAAA             GATCTGA TTGC TCAAACC              TTCCTCAATTTCTTC  52 389
   Bphy_2855 3200641 .. 3200672 - -13.8  -2.92171   TATACCCCTAAACCA      TTTTGGGATTGGCG GCAT CGCCAACCCCGAAA       CCACTTAGTCGATCA  75 58
        secE NONE
        nusG 3199546 .. 3199571 - -16.9  -3.38314   CGTAAGCGCGAAAGA         CGAATCGCGCC GTCT GGCGCGATCCG          CAAAAACCCAATTTA  93 38
        rplK NONE
        rplA 3198217 .. 3198250 - -12.5  -2.57211   ACGGTCTTTGACAAC     CGGTCGCTCGATT CGGACTGC AATCGTGCGACCG      CCCAAAGCCCTTAAA  68 77
        rplJ 3197484 .. 3197497 -  -3.8  -3.05816   TTACGCCCGACTGAA               GTGC GTCGAT GCAC                TGCTTACGCAGCTTC  43 29
        rplL 3197002 .. 3197027 -   -14  -5.06735   CACAAAGCACAAAAA         GGCCGGCGGT GTGAAA ACCGCCAGCC          TTCGCACAGCGCGCT 100 46
        rpoB NONE
   Bphy_2847 3188241 .. 3188262 - -13.7  -5.79526   ACAGGCGAAAAAAAA           CCGCCCGGT CGAA ACCAGGCGG            TTTTGCCAACCGAGA 100 71
   Bphy_2846 3186057 .. 3186091 -  -9.4  -2.85242   ATTGAACAAAATCGA     CGTGTTCGTTTCTG GGCAAAG CAAAAACGAACGCG     TTTTTGACTGCTTTC  59 193
        rpsL 3185583 .. 3185594 -  -7.2  -2.63715   ACTTACTCGACAGCA                CCGG CTAT CCGG                 CACCACCGCTTAACC  49 78
   Bphy_2844 3184926 .. 3184957 - -18.8   -4.1891   GCGCCCTAACACAAA      CGGGCGAG-GCGCTT TGT AAGCGCACCCGCCCG      GAATTCTTTCCGCTT 100 65
   Bphy_2843 NONE
   Bphy_2842 3181455 .. 3181498 -  -5.9  -4.46587   CTATGAATAAAAGAA CGTAGGTCTGGGCCGCTCGC GAGGG GCGAATG-CCCAGACCCGGG CACATACTGCTAGAT  74 54
        rpsJ 3181051 .. 3181082 -    -8  -3.59031   GCAAGCAATCAAAGA      CTTAGCGGCATCCGA TCG TTGGATGCCGCTC-G      AAACCTTTACTGAAG  64 32
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
   Bphy_2832 NONE
        rpsQ 3176075 .. 3176103 - -14.8  -3.26719   CCCACAAAGAGGGAA        GACCGAGATTAT AACAA ATAATCTCGGTC        TTGCAAGCGAAATCT  82 76
   Bphy_2830 NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
        infA NONE
        rpmJ 3170003 .. 3170018 -  -3.2  -5.27335   TTCCTCAAACAAAAA              GCGC AAACAAAA GCGC               GGCGTTCAGCCTTGA  84 31
        rpsM NONE
   Bphy_2815 3169129 .. 3169172 - -18.2  -3.22388   TAGTCAATTCATTAA CGCAAGCAGCCTGCTACCGCC TTT AGCGGCAACAGGC-GCATGCG GAGCAAGCGTCTTAG  90 37
        rpsD 3168359 .. 3168404 - -10.4  -4.68655   CAACCTGAAAATAAA CAGCCGAGGCGCCCC-CTTGC CTAAC GCAATCAGGGAACCTCGGCCG TTAATCCGATTAGCG  89 35
   Bphy_2813 3167243 .. 3167282 - -15.3  -4.65895   GCCGGTATTGAAAAA  GGCAA-GACGCGGATTTT AAAGG AAAATCCGCGTCATTACC  AGTTGCGGTACGACT 100 55
        rplQ 3166726 .. 3166743 -  -9.1  -5.37593   GCTGAAAGCAAAAAA             GCCAGGC TTTC ACCTGGC              TTTTTAATTGTTGCC 100 47
   Bphy_2811 NONE
   Bphy_2810 3164184 .. 3164215 -  -2.8  -3.10012   AAGGTGATGATGGAA      TCGCTGCTCGCG TTCAAGCG CGCGGGCGCCGA       TGGCGTGTTGACGTA  43 246
   Bphy_2807 3161365 .. 3161401 -  -2.3  -5.27779   CTGAACAGCAAAAAA   GGGTGCAGGTTTATCGC TGTAT GCGATTC-CCT-CACCC   TTTTCTTGTTTTCTC  83 90
   Bphy_2806 NONE
   Bphy_2805 3157839 .. 3157862 - -14.6  -5.41746   AACGGCGTAAAAAAA          CCGCCG-GTGC AGT GCACGCGGCGG          CTTTTTCACGCTTCG 100 54
   Bphy_2804 NONE
   Bphy_2803 3155933 .. 3155957 - -13.6   -4.2349   CGCTCACAGTCAAAA          GGCGATGCGC TCATC ACGCATCGCC          TTTTTGTTTCCGGTT 100 55
        cyaY 3153892 .. 3153916 - -21.5  -5.40072   GCTCCCTGAAAAAAA          GCCGCCGCGTA TTG TACGCGGCGGC          TTTTTACTTTCCGCG 100 77
   Bphy_2798 NONE
   Bphy_2797 NONE
   Bphy_2796 3148725 .. 3148750 -  -4.7  -3.08173   AGGAAGGCGATCCAA         GTCATTCGACGG CCT CCGCC-AATGTC         AGCGAATGCGCGCTG  46 1
   Bphy_2795 3147071 .. 3147089 -  -3.1  -3.57462   CAGCTTACTGGCAAA            GCGCCCGA CTTG TCGAGC-C             TGACGGCCGGCGCGC  51 94
        aroK NONE
        aroB 3145333 .. 3145371 -  -8.8  -2.72049   GATATCTCCGAATCA  GACGCG-AGGGCCGCAG GTGGTG CCGCTGCGCTGCGCGTC   AGGCGCCGACGCTTG  57 24
   Bphy_2792 3144012 .. 3144046 - -12.3  -2.71144   GATCGCTGCGAAGGA    CGGAAAGCGGCGCATGC TTT GCA--CGCCGCTTTCCA    CTTCGCGCTTTGCAT  69 78
   Bphy_2789 3141526 .. 3141543 -    -7  -5.19275   ACCGACAAAACAAAA             CGGCAT GCAGGG ATGCCG              TTTTCTTTTGGATGC  93 70
   Bphy_2788 NONE
        gltD 3134819 .. 3134843 - -13.6    -5.626   CATGCCAGAAAAAAA         CCGGGTCGCTC TTGC GAGCG-CCCGG          TTTTTTGACCTGCTT 100 166
   Bphy_2786 3133867 .. 3133885 - -12.4  -3.42395   CGCAGGAGCGAAAGA             CGCACGCG ATG CGCGTGCA             CGTGGATGGCCTCGC  79 252
   Bphy_2785 3132484 .. 3132497 -  -5.9  -3.03124   GGGCATTCCCGAAGA               CCGCA TTGC CGCGG                CGATGAAGCCATTTG  48 375
   Bphy_2782 3129999 .. 3130025 -    -3  -4.65895   CGCGCGACTGAAAAA        GCGTGATTTCG GCACAG CGAACTC-CGC         CAACTCAGGCCGTCG  68 30
   Bphy_2781 NONE
   Bphy_2780 NONE
   Bphy_2779 3128056 .. 3128068 -  -9.1  -4.08216   GCAGCTCCTCGAAAA                GCTGC ACG GCAGC                ACCGATACGCATCGC  76 265
   Bphy_2774 NONE
   Bphy_2773 NONE
        thiG NONE
   Bphy_2771 3119978 .. 3119994 -  -2.2  -3.12351   TCCTTTTACACGGAA              GGCC GAATTATAG GGCC              TTCGTGCAAACCCTG  41 60
   Bphy_2770 NONE
   Bphy_2769 3118309 .. 3118346 - -11.2  -2.68952   CCCAAAGAGAATCTA   TGC-CGCAGCGGCGCAC TGCCT GCGCGGCGCGGCGCGCA   GGGTTCGGTGCGGCG  64 45
   Bphy_2768 NONE
   Bphy_2767 3116711 .. 3116760 -  -4.2  -3.58269   CAATCCACGCCGAAA CTGCGAGATTCGTATCCGAGTG TTACGG CACACAGATACATTTCCCGCAT TTGACATGCCGTTAA  54 37
   Bphy_2766 NONE
   Bphy_2765 3115600 .. 3115614 -  -3.5  -4.17657   GATTATAGGGCAAAA               GTCGA ATCGG CCGAC               TTGCGTTGCCTGGGA  62 112
   Bphy_2764 NONE
   Bphy_2763 NONE
   Bphy_2762 3113453 .. 3113465 -  -3.4  -3.06696   CGTCCCCCGAAGACA                GCAT GTCTG ATGC                GTGACCTTTATGCGC  43 44
   Bphy_2761 NONE
        hisG NONE
        hisD 3109870 .. 3109884 -  -8.5  -3.17075   CTGTCTCGAATTCAA               CGCGC ATCAA GCGCG               TCCGAAACTGCCATC  57 50
   Bphy_2758 3108614 .. 3108630 -  -2.1  -2.70932   TGGTGTTGCGAACGA              CTTCCGC AAG GCGCATG              GCAATTCCTCGAATC  39 78
        hisB 3107991 .. 3108007 -  -5.7  -2.53876   GTCCATTGCAAGCCA              GACGCAC TCG GCGCGGC              CGGTTCCAGTGGTGA  45 60
   Bphy_2756 3107374 .. 3107385 -  -3.6  -2.53876   TTTCATTTCAAGTTA                GGCA GCAA CGCC                 TTTAATCCGTTGACG  40 1
        hisH 3106702 .. 3106718 -  -5.1  -3.75884   CGTTAAAGAAATGAA              TGCCG GAACTGA CGGCA              GCGATCAGGGATTCC  57 30
   Bphy_2754 3105756 .. 3105769 -  -3.7  -3.01924   GATGCCCGGTGAACA               GGCGC TCAG GCGTC                GTCCGATTCGCGCAG  43 17
   Bphy_2753 NONE
        hisI NONE
        hisE 3104002 .. 3104019 -  -9.1  -2.70932   CGCGCCCGCGAACGA             GCCTGCGC AGT GCGC-GGC             TTGGCCGCGCTTGCC  57 54
   Bphy_2750 NONE
   Bphy_2749 3103019 .. 3103029 -  -8.2  -4.65895   GTGCGTAGTCAAAAA                 GCCG ATG CGGC                 GAATCTATGTCGATT  81 94
        tatA NONE
        tatB NONE
   Bphy_2746 3101035 .. 3101062 - -10.6  -4.90778   CGCACGCAAACAAAA        TGGGCAGT-CTCC AAC GGAGCACTGCCCT        TTTTGTTGCTGTCTG 100 86
   Bphy_2744 3098921 .. 3098937 -  -2.1   -3.3785   CGAAGTCATTGATAA              CTCAGGG TTT CCCCGCA              CGGATCGCCAACATT  44 107
   Bphy_2743 NONE
   Bphy_2742 NONE
   Bphy_2741 3095951 .. 3096001 - -11.9  -4.05875   CTCAAAAAACTTAAA GGGCCAGCG-AGCGGGAAAACC GTCATGCA GGTCTTCCCTTTGCGCCGGCCC CACACCAGTTACGGC  84 45
   Bphy_2740 3095270 .. 3095286 -  -7.9  -2.71712   GGCTGGCGCGCAAAC              CGCAACG GAA CGCCGCG              CGCCGCACCCGAAGC  53 52
   Bphy_2739 3094626 .. 3094651 - -21.9  -4.54727   CGCCGCAAAGCAAAA         CGGGCCACGCG TTAC CGCGTGGCCCG          TTTCTTGACGCTGGT 100 132
   Bphy_2738 3093099 .. 3093121 -  -4.6  -3.21912   CGCGCAAGCGATCAA           GTCCCTGCCG TTG CGGCTGGCGC           GTACGCGCGCCATCG  49 257
   Bphy_2736 3091333 .. 3091359 - -12.2  -2.91264   GGGCTGATCCACAGA         CGGCGGCGCG GCGCGCT CGCGCAGCCG         ACATCTTGCGCCGTT  70 199
   Bphy_2734 3089499 .. 3089524 - -10.5  -3.69434   GGAACGAATGCTAAA         GCAGATGCGCCT GGA AGGCACA-CTGC         AAATCGCGAGCTTCC  74 284
   Bphy_2731 3087019 .. 3087058 - -20.7  -3.39668   CGCGAAAGCGCATAA  GAGGAGCGCGTCGCGGC ATCTCA GCCGCGACGCGCTTCAC   GGTCGAGCCGATTAC 100 45
   Bphy_2730 3086252 .. 3086267 - -11.8  -5.74122   CACCACACAAAAAAA              CGGCCC AGAT GGGCCG               CGTTGCGTCGTCCTG 100 62
   Bphy_2728 3083179 .. 3083194 - -11.8  -4.74103   TCCGGAACGCAAAAA              CCCCGC CTCG GCGGGG               TTTTTTGTTTTTCGG 100 76
   Bphy_2726 3080837 .. 3080858 - -17.3  -4.98531   CGCGCAAACTAAAAA           GCCCGCCAG AATT CTGGCGGGC            TTCTTCTTGTGTCAG 100 59
   Bphy_2718 NONE
   Bphy_2717 3072341 .. 3072393 - -10.5  -3.53012   TCTTCCTGCCGCAAA GCTGGCAGCATCGAGCGAGCCGCCG TTTCG CGGCGGCTCG-TCAGCGCGGCCT-C ATACCGGCTGCGTAC  70 24
   Bphy_2716 NONE
   Bphy_2715 3071099 .. 3071113 -  -8.5  -3.25823   CTGCTCGGACAGTAA               CGCCC TCGCC GGGCG               CGGCCTTCGCCGGCT  57 40
   Bphy_2707 3060551 .. 3060567 -  -7.2  -2.70932   GCCTGTGTTCAAGTA              CCGCGC GCCTG GCGCAG              ATGGTATGCCTTGCG  50 108
   Bphy_2706 3059712 .. 3059730 -   -16  -3.41023   AAGGCTCAAAACACA             GGAGGCGC CTC GCGCCTCC             TTTCAACAACGTTCA  89 56
   Bphy_2705 3057724 .. 3057780 -  -5.8  -4.56597   CCCGTCCGGGAAAAA GTACCGCGGCGGCGACGGATTGTTGCA ACGA TAGAACAATCCGCCGTCGC-GCTTTGC CTGATGGACGGTGAG  74 112
   Bphy_2704 3056949 .. 3056973 - -15.8  -4.13254   AAATCCAAAGAAGAA          CGCCACGGAA TCGTG TTCCGTGGCG          TTGTATTTTGCCGTC 100 106
        apaG 3048895 .. 3048932 -  -5.4  -3.06696   CGCGTCGCTAACAGA   CTGCGCGCGGTGCTTT CCGTTC AATGCAGCGTGCGCGG    CATGCGCAGAACGAA  49 8
   Bphy_2694 3047481 .. 3047520 - -20.8  -4.82901   GCCGGCTGACAAAAA  CGAAAGCCCGACGGCGGT GATG ACAGCCGTCGGGCTTTCC   AGTTCAGGCAACGGC 100 69
   Bphy_2688 3040440 .. 3040457 -  -2.7  -3.78312   AAATCACTGACGAAA             GATCTGA TTGC TCAAACC              TTCCTCAATTTCTTC  52 389
   Bphy_2686 3031332 .. 3031347 -  -3.2  -3.61356   ACGATGCACTCGAAA              GCGC GGACAGGG GCGC               GGTGGCGCGGTGGCG  51 75
   Bphy_2685 3029435 .. 3029472 - -25.1  -3.88787   CGATACCCGCACAAA   GAATACGGCCCAACGGT CTAC ACCGTCGGGCCGTATTC    TTTGCGCGAGCTGCG 100 102
   Bphy_2683 3026683 .. 3026730 -  -9.8  -3.45571   GCGCGGAAACAGCAA CAGGCAGCCGTCCGGATGAC GCGTAATG GTCATTCGGCCTTCTGCCTG TCCTTGCAGCGCATC  70 510
   Bphy_2682 NONE
        mraW NONE
   Bphy_2680 NONE
   Bphy_2679 NONE
        murE NONE
   Bphy_2677 NONE
        mraY NONE
        murD NONE
   Bphy_2674 NONE
        murG NONE
        murC NONE
         ddl NONE
   Bphy_2670 NONE
   Bphy_2669 3010639 .. 3010677 -  -2.9  -3.86307   CCGTCAAGAAAAAAG   TACCCGCTACTCGGCCG TTATT CGGCAGGAGATCGGGCA   ACCTCCTGTCGCGCG  54 86
   Bphy_2668 3009405 .. 3009418 -  -3.7  -2.91924   TTACGCCGCAGAAAG               CCCGC TCCT GCGTG                AGCCTCAGTCTGCCT  42 30
   Bphy_2667 3008620 .. 3008634 -  -5.6  -4.26344   ACAGCGTCACGAAAA               GCGTTG CCG CAGCGC               AACGACCGCAGTCTA  68 68
        lpxC 3007434 .. 3007451 - -10.5  -4.82667   GCACCACATGAAAAA             GCGGCCC GTAC AGGCCGC              TTTTCGTTGCTGCTC 100 64
   Bphy_2664 3003734 .. 3003765 - -16.6   -3.5594   AATGCACGCTTCAAA      CGACG-CGGCGCGCA TGA TGCGCGCCGCCTTCG      TGTGTCACGCAATCT 100 30
        argJ NONE
   Bphy_2662 NONE
   Bphy_2661 3000995 .. 3001007 -  -4.7  -4.70659   TTGCACATCGAAAAA                GGCGG AAG CCGCA                TACGGCGATTCCTCC  73 47
        rplU NONE
        rpmA 2992145 .. 2992167 -   -17  -5.27335   CGCCGCAAACAAAAA           GGCCCCGCAA ACT TCGCGGGGCC           TTTTTTCGGTCCTGA 100 60
        obgE 2990854 .. 2990879 -  -9.7   -3.0497   AGATGATTCGTAAGA         CCGGCGCA-TGC TGG GAAGTGCGCCGG         CATCCAGATTACGGC  60 47
   Bphy_2649 2989651 .. 2989675 - -13.6  -5.07486   CAGCGGCAACAAAAA          GCCGTCCCAT CGTTT ACGGGACGGC          TTTTTGATTTTCGAC 100 55
   Bphy_2646 2986203 .. 2986253 -  -8.3  -2.86747   CAGTGATGAGAATCA GCAGGATGGTCGCGGACAG-GAAGT TGT ACTCCACCGTCCGCTCCCATCA-GC GCGCGAGCGCTGCGT  55 21
   Bphy_2645 2985589 .. 2985604 - -10.4  -5.79595   CTGCAAAATAAAAAA              GCGACC TGCG GGTCGC               TTTTTTGTTGGCCGG 100 52
   Bphy_2642 2982437 .. 2982448 -  -4.4  -2.50761   ATGAGCAGGAAAATT                TGTC GCAT GACA                 CTCAGACAACAGGAC  42 27
   Bphy_2641 NONE
   Bphy_2640 2981061 .. 2981087 -  -4.4  -3.44051   CGCTGATTAGTACAA        CCGC-TGCGCC ACCCCG GACGCACGCGA         TGAGGAAGAAGAAGA  52 433
   Bphy_2639 2977560 .. 2977585 -  -4.6  -3.53811   GCGAGTCGCTCGAAA         CGTGTGTCGC TGAAGC GCGATGCACG          ATCGAAAGCGCGTTG  52 455
   Bphy_2638 2976125 .. 2976149 -  -8.6  -3.72695   ATGCTCCTCACCAAA         CTTGCCGC-GGC ACG GCCAGCGGC-AG         CCCCATCAAATACAT  67 56
   Bphy_2637 NONE
   Bphy_2636 2975031 .. 2975058 - -20.6  -5.55664   CCACGACGAAAAAAA        TCCCGCCGCCAG TAAA CCGGCGGCGGGA         TCAGATGTGATCGAG 100 96
   Bphy_2625 2964402 .. 2964429 -  -2.6  -4.03978   AACCGTGCAGATAAA        GAATCACGCGACG CCC CG-CGCCTGCTCC        GTCGGCCGTGCCGAC  57 1
   Bphy_2624 NONE
   Bphy_2623 NONE
        aroE 2960691 .. 2960704 -  -3.7  -2.52795   AAGTCGGCTAACGGA               CGGAG CGTG CGCCG                TCAGGCGCTTTGCGG  40 26
        mtgA 2959861 .. 2959887 - -15.3  -5.32944   TTCAGAAGCAAAAAA         CGGCGATTATC TGCAC GATAATCGCCG         TTTCGATTTGCGCCG 100 53
   Bphy_2619 NONE
   Bphy_2618 NONE
   Bphy_2617 NONE
   Bphy_2616 2955178 .. 2955190 -  -6.2  -2.91383   ACCGCCATCGACACA                CGCG GCCAG CGCG                TCAGGCGGCTCACAC  48 128
   Bphy_2615 2954013 .. 2954025 -  -5.5  -2.75081   TATTGTCAAAACGCA                GCGTC GCT GACAC                TTTGCCTCCTTCTCG  46 109
        araG NONE
        araH 2951387 .. 2951412 -  -3.2  -2.83073   AGGGTTATGAAGAAT         CAGC-CGCGCA TCAGT CGCGCGAACCG         CGGTTCTTCAGCTGG  41 10
   Bphy_2612 NONE
   Bphy_2611 2949421 .. 2949432 -  -2.2  -3.85539   GACAGTCATATCAAA                CTCC CACG AGAG                 GCATCGGACAGCGTG  54 212
   Bphy_2610 2948239 .. 2948255 -  -3.5  -4.60797   TGTGGACATAGAAAA              TCTCGCG GCG CGCGGGT              AACGGATAAGCCGCG  70 126
        pyrF 2947000 .. 2947017 -  -3.3  -4.08706   CGCTCAGCAGATAAA             CGCTCGGC GTC GACG-GCG             ATCTACTACCTGCTC  60 425
   Bphy_2604 2941913 .. 2941929 -  -6.5  -2.73797   AGGGAGATAAACTTA              TCGTCGA GGT TCGACGC              TGGACGACTTTCATG  50 204
   Bphy_2603 NONE
   Bphy_2602 2940678 .. 2940700 - -16.2  -4.36595   GACTGAAATGCAAAA           GGCCCGCCTG TTT CCGGCGGGCC           TTTCTTTTTTATTGC 100 74
   Bphy_2599 2936797 .. 2936819 - -12.6  -3.53012   GCGCGCCGCCCGAAA           CGCGGCGCGC ACG ACGCGCTGCG           CGCCTTAGCCGAGTG  79 30
   Bphy_2598 2935661 .. 2935680 -  -9.2  -6.30182   GCAGACAAAAAAAAA            GGCCGCCC AAAC GAGCGACC             TTCCCGCTGAGGCGA 100 49
   Bphy_2596 2933165 .. 2933193 - -15.9   -3.6682   TGCGATTGAGTTAAA        TGGCGGCGGACCG TCG CGGTCCGCCGCGT        TGCCACTGGTGGTCG  93 62
   Bphy_2595 NONE
   Bphy_2594 2931495 .. 2931535 -   -20  -3.72324   CATTTTCAGTAAGAA GCAGAAAGGCCCGGCTGAT GAGA ATCAACCGGGCCTTT-TGC  TTTCCCTCGCTTACC 100 58
   Bphy_2592 2929894 .. 2929914 -  -7.6  -3.91897   GGGGTCATCCAGAAA           CAGCGCCTG TGCA CAG-CGCTG            TCAGGCAGCGCGTGG  69 155
   Bphy_2591 2929065 .. 2929102 -  -2.8  -3.10597   CCGGCGAGTGAAAAC  GTGATCGATGCAGGGCTTA ACG CAAGCCCAGCA-CG-TC-C  TGCATGTCGAACAGG  41 4
   Bphy_2590 NONE
   Bphy_2589 2927683 .. 2927693 -  -5.4  -2.63715   ACCGATTGGACACGA                 TCGA GGC TCGA                 AGCGGGGTGTTGGAC  46 65
        leuS NONE
   Bphy_2587 2924304 .. 2924314 -  -2.4  -3.72695   AGTCGGTGGATCAAA                 GCGG TGG CGGC                 GGCAGCGGCGCGCGC  52 10
        holA 2923030 .. 2923058 -  -4.3  -4.59109   CACAGGCCGGAAAAA        CCGCCGAGCCCCG CAT CGGGACGTGACCG        GCCGGTTGCGCGCGC  73 96
        proA NONE
   Bphy_2584 2921114 .. 2921157 - -23.4  -3.44051   GCCCGACGACCAGAA GCACAAAGCCCGGTTTGCTG TTTC CAGCAAACCGGGCTTTTTAC ATGCGCTTCGCGAAT 100 54
   Bphy_2582 2903963 .. 2903981 -   -16  -4.39571   TGCATAAATGCAAAA             CGGGCTCC GTC GGAGCCCG             TTTCGTTTTGAAGCG 100 113
   Bphy_2580 NONE
   Bphy_2579 2900117 .. 2900156 -   -23  -5.72622   GCTACAAATAAAAAA  CCCCGCCGCTTCAGCC-CG TTT CGAGGCTAAAGCGGCGAGG  TTTGCTGACGCACAT 100 72
   Bphy_2578 2898580 .. 2898590 -  -5.4  -2.79131   AAAATCATTTGAAAC                 TCCT TAC AGGA                 CCGCCGCCAACGCGA  46 18
   Bphy_2577 2897764 .. 2897793 -  -6.4  -3.37499   GAACAGCTCAAGGAA       CTCACGCGTG GCAAGGGCAT CACGCGGGAG        GCGCTGCAGACTTTC  55 310
   Bphy_2575 2895272 .. 2895291 -  -4.2  -5.41143   CATTGTCGAAAAAAA            GCGCTGGA TGGG TCCAATGC             CGTTTGGTCATCCGG  90 125
   Bphy_2574 2893792 .. 2893818 -   -18  -5.09426   TTCAATTGCAAAAAA         GCGGACGGCACC CGA AGTGCCGCCCGC         CCGGTATTTTGCGCG 100 142
   Bphy_2573 2892604 .. 2892635 - -13.8  -5.09204   AGACTCCAACAAAAA      GAAACGGAAGAAGC GCCT GCCCCTTCCGTTCC       GTTCAACACGTTGAC 100 62
   Bphy_2572 2891837 .. 2891853 -  -2.2  -2.75844   CGCTCCAGTCGAAAT              GATGCA TCACT TGCCTC              CGATATAGCCAGGCA  39 15
   Bphy_2571 NONE
   Bphy_2570 2890401 .. 2890420 - -13.6  -5.75342   TGGCGTGAAAAAAAA            GCCGCTTC CGAA GAAGCGGC             CTTCTTGTGATCGAA 100 49
   Bphy_2569 2889367 .. 2889394 -  -8.4  -3.35046   CGACTTCGCCAAATA        CACGACG-CCCGA AGA TCGCGTCGCCGTG        ATCGCCACGCAGCCG  60 315
   Bphy_2567 NONE
   Bphy_2566 2886115 .. 2886140 - -20.5  -4.11394   AGCGCAGCTGGAAAA         TGCCGGCGTCC CAAC GGACGCCGGCA          TTTGTCATTTGAGCG 100 366
        rplM NONE
        rpsI 2884158 .. 2884183 - -11.7  -4.81249   GCGGAAATGCAAAAA         GCCGCCTTCGC ATCT GCGTTGGCGGC          TTTTTGCTACAGGCC 100 70
   Bphy_2562 2883533 .. 2883548 - -11.8  -5.72622   CGCACAAATAAAAAA              CGGGGC CGAA GCCCCG               TTTTGCCGCCACTGA 100 70
   Bphy_2560 NONE
   Bphy_2559 NONE
   Bphy_2558 2879678 .. 2879699 - -11.5  -3.17146   TCTTGCGATAAGACA           CGCGGCGCT CGAC ATCGCCGCG            TCAGGCGGAGGTCAG  69 37
   Bphy_2555 2876658 .. 2876686 -  -5.2  -4.25104   GCGGCGTCATCAAAA       CAGCCGACGCCGA TCTG CCGACG-CGCCTG        GGCACGATCTTCGAG  68 449
   Bphy_2548 2869649 .. 2869667 -  -5.9  -5.07652   CGCCTGAAAAGAAAA             GCGCCTG ACGGG CAGGCGT             TTTTTTAACATGCAG  85 140
   Bphy_2547 2868765 .. 2868793 - -18.2   -4.7254   ATGCGCCATGAAAAA        CGCGCGCTGGAC CTGAC ATCCAGCGCGCG        CTTTCTTGTTGGGCG 100 49
   Bphy_2543 NONE
   Bphy_2542 NONE
   Bphy_2541 2861694 .. 2861713 -  -4.2  -3.17763   TGCAGAGTCGAGGAA            GC-TGACGC TGG GCGACATGC            TATTCGCGGATGCCG  48 76
   Bphy_2540 2860668 .. 2860718 -  -3.8  -3.53224   CATGGGGCGGCGAAA GCATGGCGGCAGGCGCACGCGGC GCGTTG GCCAAGATCGCGT-CCGCGATGC CGGCTGACAAGCGCG  51 500
   Bphy_2532 NONE
   Bphy_2531 NONE
   Bphy_2530 2852359 .. 2852386 - -17.8  -5.80364   ACGCCAATAAAAAAA        CCGCTCCG-TCGC AAG GCGAACGGAGCGG        TTTGTGCGGACCGGC 100 64
   Bphy_2529 2850844 .. 2850865 - -15.9  -4.93296   TTAGCACCAGAAAAA           GGCCGGTTC AATC GAACCGGCC            TTTGTCGTTTACATC 100 62
   Bphy_2523 NONE
   Bphy_2522 2841158 .. 2841170 -  -3.3  -3.28472   TCTTATTAAAAACTA                TCGAG CTG CGCGA                TTTGATTATATTTAT  47 127
   Bphy_2521 2839248 .. 2839284 -    -8  -4.08216   CGAGCTTCTGCAAAA   GCATGGGAGT-CCGCACG TGT CGGGCGACACTCCC-CGC   GTTGCCAGCTGCATT  71 178
   Bphy_2520 2838424 .. 2838449 - -12.5  -5.75538   GGCAAAAAACAAAAA         GCCCGACGGGC CTTC ACCTGTCGGGC          TTGTTCATCGGCGAC 100 76
   Bphy_2519 2837366 .. 2837395 - -10.2  -3.27498   GAGATGGGAGAGGAA       TTC-GGCAAGCAA TGATG TTGCTTGCCTGAA       CCGGTCGGCAGACGG  68 107
   Bphy_2512 2829209 .. 2829227 - -11.6  -2.71483   AGACGCCGTCAAGCA             GCGGCGCG TCG CGCGCGGC             AGCGGAAACTGATAC  65 293
   Bphy_2506 2817936 .. 2817973 -  -8.4  -3.60792   GGCGTAACGCTCAAA   GTGCACGCGCGACAGAC AGCGA ATCCGTCCCGCGCGC-C   TTCCTGCAGCCTTAG  64 37
        hrcA 2813913 .. 2813940 -  -7.7  -4.59773   TGGCACGGCGAAAAA        CGCCGCGCATGA TGAAC TCGT-CGCGGCG        TTGCGCTGCTTCCGG  81 42
        hemH 2812741 .. 2812753 -  -4.7  -2.95656   AATTCAAGCCACAGA                CGCGC TTT GCGGG                GTCGCTGCCTGAACC  45 1
   Bphy_2501 2812187 .. 2812216 -  -7.2  -3.05384   GTCCGGGGTAGTCAA      CGAACGCACGACCG AATA CGG-CG-GCGTTCA       CGCGACCATCGAGGA  51 46
   Bphy_2499 2811106 .. 2811144 -  -4.6  -2.52795   AAGGCCGCGAACGCA  GCACTATCGACGGGCATG CCAGC CATGACCG-CG-CAGCGC  CGCTTACTTCGGCGC  42 29
   Bphy_2498 NONE
        dnaK 2808454 .. 2808488 -  -9.1  -4.77173   CCTCCATAAAACAAA     TGTGCCCGGAGAGCC GGAAA GGCTCGCCAGGCGCG     TGATCGGTTCAATCG 100 121
   Bphy_2496 NONE
   Bphy_2495 2804881 .. 2804895 -  -7.8  -3.19026   CAGGGCAAGACGGAA               TCGGGC GCG GCCCAA               CTGCTACGCGATTCG  57 435
   Bphy_2487 2797385 .. 2797419 - -15.9  -3.33261   CCGCAAGCTTTAGAA    CGCTGGCAACGAGCATG GAT CA-GCTCGTTGCC-GCG    TGGAGGACGGGGACG  89 257
   Bphy_2484 2792747 .. 2792761 -  -2.7  -3.55761   GATCGATGCGGCAAA               CCGGC TGCGC GCCGC               CGTCACGAAGATTCC  47 315
   Bphy_2479 2787390 .. 2787413 - -13.1  -3.75153   CTTGGGCAACGGAAA          GCGCGGCAG ACTCTG CCGCCGCGC           CCTCTCGAACACGAC  85 43
   Bphy_2476 2782221 .. 2782238 -  -3.4  -2.83403   CGCCTGGCACGAAAG             CCCGGCA CCCAC TG-CGGG             ATCGGGAAGGTCGGC  41 40
   Bphy_2475 NONE
   Bphy_2474 NONE
   Bphy_2473 2777983 .. 2777993 -  -4.6  -3.64703   CCCCGCTGATGCAAA                 GCGC GCA ACGC                 ATGCCCCGCCGCTTA  54 41
   Bphy_2472 NONE
   Bphy_2471 NONE
   Bphy_2470 2773394 .. 2773430 -  -9.3  -4.40561   CCCTTGCAAAAAGAA    CGGACGTCGCCCTAATC CCG GTCCCAGGCAACGTCCG    TCACCAGGAACGGCG  82 43
   Bphy_2469 NONE
   Bphy_2468 2770699 .. 2770748 - -22.4  -4.19817   CTGAGCCATGCAAAA GCCGAAGGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCCTTCT-C TCTTTCCGGTGTCAG 100 56
   Bphy_2466 2768993 .. 2769006 -  -4.5  -3.19463   CTCATCATGCAGCAA               CG-CCC TGT GGGTCG               TGCACGAGCAGGGCG  48 163
   Bphy_2465 2767056 .. 2767077 - -10.1  -5.27335   CGCGCCAAAGAAAAA           TCCCGCGAT CTGC ATCGCGGGT            TTTTTTATGGCGCTA 100 89
   Bphy_2462 NONE
   Bphy_2461 2760855 .. 2760873 - -12.4  -3.29144   GTACCGCTTCGACAA             GCCCGTGG TCG CCACGAGC             GACGGGCTGATCGGC  71 310
   Bphy_2459 2758335 .. 2758349 -  -2.7  -2.79302   AGTATCCGCATCACA               GCGCC CTCGC GGCCC               GGTACATCATCCATG  39 6
   Bphy_2458 2756972 .. 2757002 - -11.8  -3.78953   ACGTGCACGACGAAA       TAGCACGGCACCTG GGA CAGGAGCGGCGCTA       TGTCGAGGACGGCAG  80 286
        glyA NONE
        nrdR 2747682 .. 2747695 -  -4.5  -2.80879   AGGAACGCCAACAAT               TAGCC GGAT GGCCA                GGTGGCGGACGCGCG  43 121
   Bphy_2447 NONE
   Bphy_2446 NONE
   Bphy_2445 NONE
   Bphy_2444 NONE
   Bphy_2443 2744365 .. 2744391 -  -9.2  -2.61695   CCGACCTCCAAAGAT         CTGAGCGCGCCG CAT CTGCGCGCGCTG         CGCAAGGAACTGCTG  55 458
   Bphy_2439 2742383 .. 2742407 - -17.2  -4.18018   GGCGCCTATTTAAAA          GCCCGCGTTC TCAAC GAACGCGGGC          TTTTCTTTTTGCCTC 100 56
   Bphy_2437 2739854 .. 2739864 -  -6.8  -3.05384   GTCGTTTGGATTGAA                 TCCG TCG CGGA                 TAGTGATCGAGTTGC  51 376
   Bphy_2435 NONE
   Bphy_2434 2736476 .. 2736500 - -17.1  -5.00616   TGCTGTGGGAAAAAA          GACGCGGCGTG GCG CGCGCCGCGTC          CTGATTTCGCGGGCG 100 43
   Bphy_2430 2732085 .. 2732102 -  -7.7  -2.99545   CGGAGATAGCACAGA             CGACGCT TGGC AACGTCG              AGGCGTGGCGCGACG  54 117
   Bphy_2427 2729402 .. 2729415 -  -4.5  -4.11216   CCGCCAGCCCGAAAA               CGACG GGCC CGTCA                GCGGCAGCCGGAGGT  61 231
   Bphy_2424 2727512 .. 2727531 -  -9.2  -3.96188   AACCAGATGTACAAA            GCGGATGC CCGC GCAGCCGC             AAAAACCTCGTCCCA  73 84
   Bphy_2422 NONE
   Bphy_2421 2721880 .. 2721900 -  -6.7  -3.53811   CTTATTCCGGTCAAA            CCGCACGCG AAG CGCGCACCG            CGCGAATCGCCTTGA  58 0
   Bphy_2420 2721210 .. 2721241 - -17.2  -5.75945   ACGGCGGAAAAAAAA      GCGGGCGCAGCCAG TGTG CCCGCCGCGCCCGC       TGGAGGAAGCGGTCA 100 46
   Bphy_2416 2716643 .. 2716699 - -19.3  -3.09834   CATGTCAGCAGGCAA GCGCG-CCGCAACCGGCAGCGCGCCG TCCTTC CGGCGAGCGGCTGGCTGCCGCCGCGC GCGCAGATCGTGCAA  90 71
   Bphy_2415 2715988 .. 2716000 -  -5.5  -4.08692   GAAGGCGCCCGAAAA                GCTGC TGC GCAAC                CTCCTCGCCGCGACA  66 126
   Bphy_2413 2713708 .. 2713729 -  -5.1  -3.70469   AACGAGAACGGCAAA           CT-CGCAGCC ATC GGCCACGCAG           GGGCCCTCAAGGCAT  58 322
   Bphy_2405 NONE
   Bphy_2404 NONE
   Bphy_2403 2703154 .. 2703170 -  -4.3  -3.06162   GACGGGATCGGAATA              GCCGACA GAT TAGCGGC              TCGCAACCGAATTGT  46 113
   Bphy_2402 NONE
   Bphy_2401 2698294 .. 2698304 -  -8.2  -3.17075   CGTGGTTCAATCGAA                 CGGC AAC GCCG                 GCGGCATGCAATGCA  57 43
   Bphy_2400 NONE
   Bphy_2399 2695693 .. 2695722 -   -15  -2.71712   CGGCTCCGTCGAAAG       CGACGCAGCTGC GCATGG GCGGCTGCGTCG        GAACAAACGTACGGG  77 82
   Bphy_2397 2692753 .. 2692766 -  -3.7  -3.29043   AACCGCTCGCGACAA               CTGGC ACCT GCCCG                TCAAGTAGCGGGTGC  47 82
   Bphy_2396 2691258 .. 2691297 -  -9.8  -3.53012   TCCTCTGCCGTCAAA  GCGGTGCCGCCGACCGGGC ACC GACCGGCTGACGGCTCC-C  TCGCTACTCATTCTG  70 33
   Bphy_2395 2689810 .. 2689822 -  -7.7  -3.44487   CATTACACGGAAAGA                CGAAG CCG CTTCG                CAGGCGATGAACGAA  60 291
   Bphy_2393 2687678 .. 2687688 -  -2.4  -3.18465   TAACAGCAAAACAAT                 GCTG CCT CGGC                 GAGAGTCTGGGCTCT  43 52
   Bphy_2391 NONE
   Bphy_2390 2684976 .. 2684993 -  -9.8  -3.08211   ACCCCGTCAAAATGA             GGCGGC TAGGCT GCCGCC              AGTTTCCCAACCTTG  64 182
   Bphy_2389 2684402 .. 2684431 -  -7.7  -3.47573   GCAGTGATACTACAA       CGCGC-CGAGCGGC GCC GCCCCCCGTGCGTG       AGCGAAGTCTTCGTC  62 156
   Bphy_2388 2683676 .. 2683686 -  -5.4  -3.14564   GGACTCTGGGATCAA                 TCTG AAA CAGA                 CAGATGCTGGTTGCA  50 57
   Bphy_2387 2682650 .. 2682671 -  -8.1  -3.40403   GCGGTTCCATGACAA           TCTCCTCTTC AAC GAAG-GGAGA           TCGATTCTGCGCTTG  59 179
   Bphy_2386 2681883 .. 2681894 -  -3.6  -2.72463   ATTCATTCTGAATCA                CCCG TCGG CGAG                 GCGCGTCTTCAAGAT  41 149
   Bphy_2385 2680841 .. 2680865 -  -4.1  -2.69964   GGCTCAAGCAGACGA          GTCGGACGGCA GGA CGCCGTGCACC          GATGAACTAATGCGG  41 62
   Bphy_2384 NONE
   Bphy_2383 NONE
   Bphy_2382 NONE
   Bphy_2381 NONE
   Bphy_2380 2673634 .. 2673644 -  -4.6  -3.53012   CCTGCGGCCTCGAAA                 GCCG GTT CGAC                 GATCGCAATCCCCGA  52 46
   Bphy_2379 2671646 .. 2671669 -  -3.8  -2.63079   CGGCCACATAATCGA          CGGCGAGT GCCTGGAT ACTGGCCG           AATCGAGCCGACTGC  40 211
   Bphy_2377 NONE
   Bphy_2376 2666846 .. 2666862 -    -3  -2.87463   AATGGCTTCGAGACA             GGATTGC TGCT GCA-TCC              GAGCCCACCCCAGTG  40 511
   Bphy_2375 2666147 .. 2666168 -  -6.7  -3.17075   CTGCGCTGAAGCGAA           TTCACCGTTT TAG AAACGG-GAA           CAATGTGGGACTAGT  54 104
   Bphy_2372 NONE
   Bphy_2371 2662990 .. 2663004 -  -7.8  -3.01712   CGTCCTCTTGCAAGA               CGAGCG GCC CACTCG               TCGTCAAAGGACGAT  56 420
   Bphy_2369 2661151 .. 2661176 - -11.1  -2.76671   ACACGCATGGCAAAT         CGTCCGCGCGC GTTC ACACGCGGACA          GTTTCGAATGCAGCG  65 55
   Bphy_2368 NONE
   Bphy_2367 NONE
   Bphy_2366 NONE
   Bphy_2364 2656258 .. 2656274 -  -3.6  -2.87132   GCTCCCGTGGATAGA              CGCATG AGTAA CAAGCG              AAGCCGCGCACGAGC  42 165
   Bphy_2363 NONE
   Bphy_2362 2651193 .. 2651226 - -15.3  -3.32022   TGGCCGACAGATCAA     CATCCAGTGTGGCCC GCCT GGACCACGCTGGACG      CAACCACCACTGTGC  86 46
   Bphy_2359 2648024 .. 2648046 -  -5.5  -2.97707   CGAGATCAAGAAGCA           GCTCGACGA AGCAA CCGTCGAGT           ATCGCTGGGGCGATG  48 419
   Bphy_2357 2644873 .. 2644908 - -10.5  -3.63744   GGTCCGGTTAAAACA    CGA-ACGCGCGATGCT GGTTT AGCACCCCGCGTGTCG    CCGCAGGTTGAACGG  73 139
   Bphy_2356 2643827 .. 2643854 -   -12  -4.07568   GTGGGTGCTGGAAAA        CCG-CTGAGCGTG CAC CACGCACAGGCGG        CCCATCGGCTGCGCG  84 65
   Bphy_2353 NONE
   Bphy_2352 NONE
   Bphy_2351 2636801 .. 2636811 -  -2.4  -4.20368   GGACCGCAATACAAA                 CGGC CCG GCGG                 CATTACTTCACAAGC  60 41
   Bphy_2350 NONE
   Bphy_2349 2634888 .. 2634903 - -11.8  -5.59879   CATAAAGATAAAAAA              GCCCGC TTAC GCGGGC               AACCTTCTACCAGGA 100 59
   Bphy_2346 2632788 .. 2632813 - -12.5  -3.45031   GCTGGAAAAACCGAA         GAGCGATGCGC GATG GCGCGTCGCCC          TTTTCGTTGTGCCGC  79 51
   Bphy_2342 2627662 .. 2627673 -  -2.2  -3.01924   GATGCGCTGCGAATA                CCTG TCCG CAAG                 CGTCAATTGTTGAAA  41 145
   Bphy_2341 2626500 .. 2626546 - -17.4  -3.76224   CCTGGATGGATGAAA GATGCGCGGGCGCTTCC-CGTC ACGAA GACGAGGAAGCGCCCGTGC-CC GCTATCAGTTGCCAG 100 30
   Bphy_2340 NONE
   Bphy_2339 2623617 .. 2623634 - -12.7   -4.4078   GTCCGCCAATGAAAA             GCGCCCT TTTC AGGGCGC              TTGCGCGCGCCTCAA 100 96
   Bphy_2338 NONE
   Bphy_2337 2620987 .. 2621011 - -15.8  -5.93809   GCCCCAGAAAAAAAA          TCGCCAGCAC GCGAG GTGCTGGCGA          TTATCGACAACGCGC 100 54
   Bphy_2336 2619155 .. 2619169 -  -6.4     -3.54   ATCAGGCGAGAAACA               GCGAAA CAC TTCCGC               GCGCAACCGACGAGT  57 507
       groES NONE
       groEL 2615801 .. 2615828 - -17.2  -4.33675   ACCAGAGCACCAAAA        GAAAAACCCGCA TCGC TGCGGGTTTTTC         TTTTTTTGGCACGGG 100 90
   Bphy_2330 NONE
   Bphy_2329 NONE
   Bphy_2328 2611550 .. 2611568 -  -3.8  -4.56775   ACGCCGCGCGAAAAA             CGCAGTCC ATG AAACTGCA             CTCTATCATGCGCCT  68 145
   Bphy_2327 NONE
   Bphy_2326 NONE
   Bphy_2325 NONE
        pyrB NONE
   Bphy_2323 NONE
   Bphy_2322 2606205 .. 2606228 -  -3.8  -3.71527   CGGCAACGAGCCAAA          CCGCTGGAAGC CGG GCCTCAAG-GG          CATCGACCGGCTGCG  56 374
   Bphy_2320 2604415 .. 2604431 -  -9.5  -3.16683   ACGCCAGCGCACTAA              CAAACTG ATG CAGTTTG              AAAATCAGGCGACCG  61 30
   Bphy_2319 NONE
   Bphy_2318 NONE
   Bphy_2317 NONE
   Bphy_2316 NONE
   Bphy_2315 2599923 .. 2599962 -  -5.5  -3.17392   CACCTCGCAATCGAA  TGGCCGGGCGACGTCGCC TCAGT GGCGCC-CCAGCCGGCCG  GCCCAGCCGTCCCGC  50 4
   Bphy_2314 NONE
   Bphy_2313 NONE
   Bphy_2312 NONE
   Bphy_2311 NONE
   Bphy_2310 NONE
   Bphy_2309 NONE
   Bphy_2308 NONE
   Bphy_2307 2591928 .. 2591938 -  -2.6   -2.5092   CAATAGGTGACGAAG                 TTTA GGA TAAA                 GTGATCGGACTTAGC  37 36
   Bphy_2306 2590401 .. 2590437 - -18.2  -2.83894   ATTACGAGTATGACA    TATCGTTTCTGGCCGG AAACG CGGGCCAGAAACGATA    TACGGGGTGACGTTC  86 101
   Bphy_2305 2589299 .. 2589315 - -10.8  -2.85351   CCTGGCGAGATGAGA              GGCCGC GCGAT GCGGCC              TGATTAACCCGGACA  62 48
   Bphy_2302 NONE
   Bphy_2301 NONE
   Bphy_2300 2582910 .. 2582928 -  -3.8  -3.60296   CACGTTGACGTTAAA             GTCGGC GCTCGCA GCCAAC             GCGATAGCTCGTACG  51 159
   Bphy_2292 2571395 .. 2571407 -  -4.1  -2.82516   CCGCTCACGACCACA                TGACT CAT AGCCA                CTTCCAGCCGAAACG  41 17
   Bphy_2291 2570425 .. 2570440 -  -3.2  -3.12606   GGAGACATCAGTGAA              TCTTGC ATCT GCATGA               ACGGTTCAGTGAGTC  43 31
   Bphy_2290 NONE
   Bphy_2289 2567494 .. 2567507 -  -9.5  -5.25893   ACAGACATGAAAAAA               GGCGC CTCG GCGCC                TTTTTCGTTACATCA 100 33
   Bphy_2287 2564123 .. 2564142 -  -2.8  -3.48395   ATCGCCGCCACACAA            GTTCGTCAG TCA CTGTCGA-C            TGGAAGTCGTCAAGC  47 378
   Bphy_2282 2556688 .. 2556698 -  -4.6  -3.39327   TCGCTACATTGACAA                 GCCG TTG CAGC                 GCGCGCTGCGCCGTG  51 195
   Bphy_2267 2540454 .. 2540478 - -11.5  -5.52384   CCGCGAGCAAAAAAA          CGACGCCTT GAGGTGA AAGGCGTCG          CACACAGCTTGAAAA 100 55
   Bphy_2266 2538924 .. 2538937 -  -5.2  -3.53224   GATCGCCCTTTCAAA               GCGG ATAAAG CCGC                GTCACAGCAGGCCGA  52 27
   Bphy_2265 2537960 .. 2537993 - -21.1  -2.83012   AAGCGCACGATGACA     CGCGACGACGCCGCAG CTG CCGCGGCGTC-TCGCG     ATGCATTGGACGGAA 100 56
   Bphy_2264 2536598 .. 2536614 -  -2.9  -4.68593   TGCAGCAGGCAAAAA              CAGCACT GCC AGCGCTC              AGCCTGGCAACGGCA  68 24
   Bphy_2250 2523737 .. 2523751 -    -7  -2.89564   GGCGCAGCGTATATA               CGGCGC TGA GCGGCG               TGCAGGCGGGACCGC  49 78
   Bphy_2245 2519246 .. 2519263 -  -2.6  -2.64472   CATCGTCGAAACGCA             CGGCGA GGCTCA TCGCGG              CTTCCCCTCAAGCGC  38 33
   Bphy_2244 NONE
   Bphy_2243 2516748 .. 2516794 -  -4.3  -3.95448   ACACGAAAACCCAAA CAGCGGCTGCGTCGC-AGAC CAAAAAGC GTCTAGCGCCGCCCACGCTG CAAAAACGCGACAAC  59 8
   Bphy_2242 2515569 .. 2515606 - -16.3  -3.54424   GGCTACGTCGGGAAA   GCGCCGCGCTTCGCG-CG TGT CGACGCGAAGCGCAACGA   GCGCGATCAGAACGG  93 32
   Bphy_2241 NONE
   Bphy_2240 2513099 .. 2513142 - -21.9  -2.87344   TATCTCGTCGACAGA TCGAGCGGC-GCGGACCAGA AGGTG TCCGATCCGCTGCCGCTCGA CGCGTTCGTCAAATT 100 144
   Bphy_2238 2511186 .. 2511196 -  -8.2  -3.01712   CGCGCGCGTTGAAGA                 CGGC GCA GCCG                 GGCACGCCGGAGTTT  56 245
   Bphy_2235 NONE
   Bphy_2234 NONE
   Bphy_2233 2505922 .. 2505939 -  -3.4  -2.64616   TGGGGATGCACATCA             GGCCGAG GCGTT CTCG-CC             GATCACCGTCACCGG  40 5
   Bphy_2232 NONE
   Bphy_2231 NONE
   Bphy_2230 2502642 .. 2502673 - -16.6  -3.86653   ATCGAGTAAAGACAA      TCGGCCGCATTCAC TCGC GCGAATGCGGCCGG       TCAAAGAGACAATGC 100 46
   Bphy_2229 2501417 .. 2501431 -  -2.7  -2.57132   TTTTCTTCGGACAAG               GCGGG CATAT CCGGC               GTGATTTGCCTGTCA  38 257
   Bphy_2225 2497164 .. 2497204 -  -4.8  -3.44529   GCATACAGCAACGAA TCGCCGACG-TTCGAAT-GA AAG TCGATTCGGGTCATCGGCGA TCCCGGTTTACTGCC  52 66
   Bphy_2224 2496756 .. 2496770 -    -7    -3.224   GAATGCGGGACAAGA               CCGCGC ACC GAGCGG               ACAGGAACCGGTCAG  54 37
   Bphy_2223 2495498 .. 2495523 - -20.5  -3.91897   GCGTCGATGGATAAA         GGGGCACACGG ATCG CCGTGTGCCCC          TTTGCTCTTATAATG 100 420
   Bphy_2220 2492576 .. 2492588 -  -2.6  -3.06312   AAATCCGGGACTCAA                GCGC ATTGG ACGC                TTGCCACGGCAAAGC  41 46
   Bphy_2219 2491399 .. 2491416 -  -8.3  -2.87564   TGAGCGTCGGACATA             GTGGCGG CGTG CCGCCGC              GGCCGGTGATGATGA  55 242
   Bphy_2213 2486599 .. 2486615 -  -5.7  -3.06183   CCGAGCGCGAGGTAA              GCGCCAC GTC GCGGCGT              GTTGTACGTGTAGGC  49 82
   Bphy_2212 NONE
   Bphy_2211 NONE
        cobT NONE
        cobS NONE
   Bphy_2208 2481746 .. 2481794 -  -8.9  -3.14132   CGTGTCGCTGACGAA GCTCGGCACGCTGC-TCGGCACGAC TTC GACG-GCCGATGCAGCG-GC-GCGC AACTTCCGCCAGCAG  57 468
   Bphy_2203 2477197 .. 2477209 -  -2.7  -3.28684   AATGACTTACATTAA                TTCTC CTC AAGAA                CGAATCAGCCGATAG  44 30
   Bphy_2202 2476258 .. 2476270 - -10.5  -3.21416   CAGGGGGAGGACGAA                GCGGC CGC GCCGC                CCGCCGGGCAGCCCA  65 411
   Bphy_2199 2473315 .. 2473340 -  -7.5  -3.84406   CGTCGACGACAAGAA         CGCGATCAAGG GCAG CCGCGATCACG          TGCCGACGCAAAGCT  63 109
   Bphy_2194 NONE
   Bphy_2193 2464128 .. 2464151 - -12.4   -3.1919   ACAGGCACAAAACCA          CGCAGCGCCGC ACC GCGGCGC-ACG          AATAAAAGGCTGATC  74 132
   Bphy_2189 NONE
   Bphy_2188 2456395 .. 2456424 -  -7.7  -3.60098   ACTGGCGACCGGAAA       GCCCGTGAGCCCG AGAC CGGGGTTACTGGC        GGATCAGCCCGCACG  64 18
         dcd 2455472 .. 2455508 -   -13  -4.58395   GCGATTCTCCAAAAA    GAACGACCGCTGGGCT GGTTA AGCGCAGCGGTCACCC    GGATAGCTGGTGATT 100 56
   Bphy_2186 2453179 .. 2453190 -  -2.2  -3.23216   CTTCATGATCACGAA                TCGC GCAC GCAA                 TCGACGAAATACTCG  43 7
   Bphy_2185 2452262 .. 2452291 - -13.6  -3.08679   GGGGTTCATCGAAGA       CGCGGC-GCGCGA TCTGC TCGCGCAGCCGCA       ATTGAAGAAGGTGGA  76 190
   Bphy_2181 2447950 .. 2447964 -    -7  -4.57073   GATGCCCGCGAAAAA               CCCGGC AAC GCCGCG               CCGCATGCAAAACGC  76 43
        hemC NONE
   Bphy_2178 NONE
   Bphy_2177 2440098 .. 2440120 -  -6.2  -3.25177   GGCCAAAAAACCAGA           TCCCGACTGC GTC GCAGGCAGAA           AAACCATTAAACAAT  50 32
   Bphy_2173 2435340 .. 2435359 - -13.6  -4.85782   TTGCCCAAAAACAAA            GACGCTCC CGAG GGAGCGTC             CTGTCAGCCACGAAG 100 55
        nadE 2430824 .. 2430839 -  -4.6  -3.52192   CGCAACGGCAGATAA              CGACTG GTTT CAGGCG               GCTTTGTCCGGAACC  52 19
   Bphy_2168 2429922 .. 2429935 -  -2.3  -3.68222   CGTGAACGGCAACAA               CGGTG CGGG CAACG                CGACGATCTATACGC  50 455
   Bphy_2162 2423930 .. 2423955 - -11.1  -5.18726   CCCCGACAAGAAAAA         CGCCACGGCAA AGCG CTTCCGTGGCG          TTGCTACGTGGCACG 100 71
   Bphy_2160 NONE
   Bphy_2159 2420794 .. 2420812 - -11.7  -2.52623   CTGCTCGCAGAATAC             GGCGCGT TTCAG ACGCGCC             TGTCATCGACCGCGT  61 301
   Bphy_2156 2416431 .. 2416442 -  -7.2  -2.55253   ATGAATCTCAATCGA                GCCG CAGG CGGC                 TTTCGGCGTAGGCGT  49 6
   Bphy_2155 2414988 .. 2415005 - -12.7  -4.40003   CGCGACAAACACAAA             GGGGAGC CGCG GCTCCCC              TTTTCCATTGCCCGC 100 74
   Bphy_2150 NONE
   Bphy_2149 2411269 .. 2411318 -   -10  -3.71915   TCAAAAAAACATCAA GTCGGCATACGTCGCGGCGCACGAC CGT GCCGC-CGCCGCGA-GC-CGCCGGC TCAGCCACGCGGGAA  76 26
   Bphy_2148 NONE
   Bphy_2147 2409205 .. 2409229 - -13.6  -2.78384   GCGTCGCCGAGCACA         GCCGC-CGCTC GAGC GAGCGAGCGGC          TCTCAAAGACCGGGG  73 28
   Bphy_2146 2408748 .. 2408764 -  -7.2  -4.34345   GACAGACGAGCAAAA              GCCCGC TGTCC GCGAGC              TCGCGCGAAGCAGAT  74 84
   Bphy_2145 2407145 .. 2407166 -   -13  -4.55798   GATTGGAAACGAAAA           CGGCAGCC TCGATG GGCTGCCG            CCGGTGACGCCTGTG 100 60
   Bphy_2137 2400596 .. 2400620 - -10.8    -4.564   AATGCCAAATGAAAA         CCCGCAACAGC TCGC GCT-TTGCGGG          TTTTTTGTTTGTCAC  89 116
   Bphy_2134 2397496 .. 2397506 -  -8.2  -2.72508   ACATAGCAGACAGTA                 GGCG CTA CGCC                 TATTTCACTGCTCTC  53 514
   Bphy_2133 2395594 .. 2395607 -  -3.8  -2.71011   ACTGTTCGTTAATGA               CCGT TTTCGG ACGG                CGGCGTGAGCGTGAC  41 66
   Bphy_2132 2394711 .. 2394726 -  -3.9  -4.39696   GGGCAAAGGAAGAAA              GCGGG CACATT CCCAC               AAGGCCCTCGCCGTT  65 193
   Bphy_2131 2393510 .. 2393531 -  -5.8   -3.0263   ACGATTGGCTTAAGA           GCCGCAAG ATCGCA CCTACGGC            TCACGGTATGCGGCA  49 215
   Bphy_2128 2390937 .. 2390958 - -12.3  -3.47403   GGAACTGATAACGAA           CCGAAAGGC GTCG GCCTTCCGG            CGAATTCCGGTAATA  79 398
   Bphy_2126 2390296 .. 2390317 -  -7.1  -3.65351   TGAGCGGCACCGAAA           GCGCGCCCC GTTC GCGGCGGGC            GTGCGCGGCAGCAGC  60 85
   Bphy_2125 2388204 .. 2388216 -  -5.5  -3.88291   GACGATTGGTATAAA                GGCGT ACT ACACC                GATGGGCGTGCTACT  62 36
   Bphy_2124 NONE
   Bphy_2123 2383532 .. 2383545 -  -3.7  -2.87132   TTGCGCCGTGAGAGA               CCCCG CTCA CGGCG                CTTGACATCGTCAGC  42 36
   Bphy_2122 2382388 .. 2382426 -   -11  -4.07568   TGCCGGTGTTGAAAA   CGCTGTTCGTCGCGCC CGCTATC GGTGTGACGAACAACG   AGTTCACGCTGGCGT  81 511
   Bphy_2114 2372160 .. 2372170 -  -8.2  -3.16668   CAAGAGGTCTATGAA                 GCCC GCC GGGC                 AACGCCGTCCAGATA  57 8
   Bphy_2113 2370080 .. 2370099 - -13.6  -5.48825   TAGCAGGCAAAAAAA            TGCGCTGC CGAA GCAGCGCA             TTTTTACCATCCCGG 100 63
   Bphy_2111 NONE
   Bphy_2110 NONE
   Bphy_2109 2367373 .. 2367383 -  -2.4  -4.07568   CTGTTGCGTTGAAAA                 GCGC GTC GCGA                 TGCCGGCTGATTGGA  57 166
   Bphy_2108 NONE
   Bphy_2107 2365320 .. 2365341 - -17.3  -5.05505   AGCATAAACGAAAAA           GCCCGCAGC ATCC GCTGCGGGC            TTCGTGTGCGACGGG 100 58
   Bphy_2106 2363536 .. 2363583 -  -6.3  -3.44527   CAGCGACGACTACAA TCGTTGGCACGC-GTGCG-TTCG GTTT CGCATCGAACGGCGCGTCAACGA AGGAGACATCGATGC  55 487
   Bphy_2100 NONE
   Bphy_2099 2357485 .. 2357512 -   -20  -4.07568   TCCGTCTCCCGAAAA        CAAACACCCCGC ATGT GCGGGGTGTTTG         TGTCGATGCATGAGC 100 65
   Bphy_2095 2354250 .. 2354267 - -12.7  -5.17576   GATGAATGCAAAAAA             CGGCCTC CTAC GAGGCCG              TTTTTCATTGAAGCG 100 59
   Bphy_2092 2349869 .. 2349894 - -12.5  -2.79183   CGTACCGCGATCACA         CCGACCGCTCG GGCG CGAGCGGCCTG          ATCGACGACACCTCG  69 158
   Bphy_2090 2347822 .. 2347853 - -10.9  -3.21099   CCCCTCTACGACGAA      GC-CGTCGCGTTCG TGGTG CGAACCCGACGCGC      GTCGATTTCGGCGGT  68 276
        purT NONE
   Bphy_2086 NONE
   Bphy_2085 2340813 .. 2340843 -  -5.3  -2.92038   TCGAAAACGATGACA      GCCGCGCCTATGCA TCGA TACGG-GGCGCGGC       CATTGCGTGGCACAC  48 158
   Bphy_2084 2339028 .. 2339044 -  -7.9  -3.15663   AGCGACGCGCAGCAA              GGGCGGT TCC ACCGCCG              CCCCACCGTCACGCG  57 54
   Bphy_2083 2337113 .. 2337157 -  -4.8  -4.56597   GGCTTTCGCTAAAAA TGCGCCTGCGCTCGG-ACCGC TTGC GCGTTGCCAAAGGCGGGCGCG CGGGCGTCCGCTCAA  70 422
   Bphy_2082 2335589 .. 2335611 -  -9.8  -4.15044   CGCCGCGCCAACAAA           GATGGCGCCC GAA AGGCGCCATT           CGCAAAAGCAATCAG  84 60
        dnaE 2329483 .. 2329494 -  -7.2  -3.53012   CCGCGCCTGTTTAAA                CGCG GCAG CGCG                 CGTTTCTCCGACGAC  57 414
   Bphy_2077 NONE
   Bphy_2076 2325855 .. 2325876 -  -3.7  -2.52543   AGGCCCGGCAATTCA           TTGCCTG-GC ATC GCGCAGGTAA           AACGCCGTGCGCGCC  40 1
   Bphy_2075 2324221 .. 2324256 -  -6.2  -3.07013   GAGTCGTTCAAGACA   GCCGACGATGC-CAGC GACGAA GCCGTGCA-CATCGGC    AAGAGCATCGTCGAA  49 75
   Bphy_2062 NONE
        mgsA NONE
   Bphy_2060 2312056 .. 2312093 - -19.1  -3.95674   AAAACCCGTAAACAA   CCGAGGGAGCCGCCGGC TGCC ACCGGTGGCTCCCTCGT    CTACGCGCAGTATTG 100 111
   Bphy_2059 NONE
   Bphy_2058 2311722 .. 2311770 -  -3.2  -4.78107   CACGACGATGAAAAA TGCCGGCTGCAGGACATTG-TTGA GGC TCATTCAATGTCCTCC-GCGCGCA GCAGCGCATAGACGA  74 3
   Bphy_2057 NONE
   Bphy_2056 2307778 .. 2307796 -  -6.6  -3.64703   TGTTCTCTATTCAAA             GCTCGCGC AAA GCTCGAAC             CCAATGCTCAAACCC  60 33
   Bphy_2055 2307138 .. 2307150 -  -9.1  -3.69497   CGAAAACCACAAATA                GCGAC TGC GTCGC                AGACATCAAAAAAAG  68 43
   Bphy_2054 NONE
   Bphy_2053 2302873 .. 2302895 - -11.2  -3.05294   TGAAACGCCGCAACA           CTGCGTCGCG TCA CGCGACGCCA           ACCAGCCGATATCCG  68 13
   Bphy_2052 2302381 .. 2302401 -  -3.2  -5.29846   AAGCCCAAAGAAAAA           CCAGACGCG GGAC CGCGTC-GC            ACACAAAACCCGTTA  84 38
   Bphy_2051 NONE
   Bphy_2050 NONE
   Bphy_2049 2298010 .. 2298022 -  -4.7  -2.57721   GAATTGAGCAAGTCA                CGGCG CTG CTCCG                TTTGCATTTCCCCGC  43 332
   Bphy_2043 NONE
   Bphy_2042 2292631 .. 2292652 -  -2.9  -2.87132   CCCGGTTCGGACAGA           CGTATCGAA TCAT TTCGAATCG            CCTCCGTGGTCGTGC  40 13
   Bphy_2041 NONE
   Bphy_2040 2289806 .. 2289827 -  -2.2   -3.4398   GTTGAATTGAAAAAT           CCCGGC-TG GAGTG CATGCCCGG           CCTTCGACGAAATCA  47 38
   Bphy_2039 NONE
   Bphy_2038 NONE
   Bphy_2037 2288013 .. 2288025 -  -3.3  -3.12482   GAAGACTATCCAAGA                CCCGC GGA GCAAG                GAGATCTGGCGTGCG  43 52
   Bphy_2035 2286599 .. 2286612 -  -3.8  -3.06183   CGCACGCTCATGCAA               GCTC CAGCAC GAGC                CGCCGCGTGCGCGCG  43 4
   Bphy_2034 2285965 .. 2285982 -  -7.7  -3.44319   CGGAACGCATTAGAA             CGACGAGC CCG GCTCG-CG             CAGGAACGCAATCTC  62 2
   Bphy_2022 NONE
        ilvH 2273011 .. 2273026 -  -2.4  -3.05816   GGATGCCTGACGCAA              CGCCCG GCTC CGATCG               AACTGCTGTCAAACC  41 34
   Bphy_2020 2271837 .. 2271866 - -12.2    -4.371   CGTAGGATAGCAAAA       GCCGCCCAGG-GT TCAGC ACACCTGGACGGC       TTTTTGAGGCTTCCG 100 78
   Bphy_2019 NONE
   Bphy_2018 2269848 .. 2269891 -  -6.9  -3.37939   AATTGGAAAACGGAA TTCGAGTGTTT-GCGCCACCA CCGC TGGCGACGCTAAACAA-CGAA CGAGGCAGACGGAGG  56 397
   Bphy_2017 2268204 .. 2268217 -  -9.5  -4.93296   CGACGACGATAAAAA               CCCGC CATT GCGGG                TTTTTTATCGCGGCC 100 59
   Bphy_2015 2266017 .. 2266027 -  -2.4  -3.67597   GCGGTCACGGAAGAA                 GGGC CGT GCCG                 TGGGTTACAACCAAA  49 145
   Bphy_2014 2265646 .. 2265684 - -18.4  -4.58395   CGCACCGTTGAAAAA   CAAAATGCCTGTATCAGC GGA ACTGACACAGGCATCTTG   CTGACAGAAAGTCCG 100 51
   Bphy_2013 2263212 .. 2263240 -   -16  -4.80882   ACCCTACATGAAAAA       CGGCCGGC-GCGC TTTT GCGCTACCGGCCG        TCCCGCTTTCACCGC 100 42
   Bphy_2012 2262103 .. 2262122 - -11.4  -3.98173   TCAAACTCAATTAAA            CGAGCGCT GTCA AGCGCCCG             CGCCCCAATTCAGCA  82 15
        tpiA 2261180 .. 2261200 -  -6.8  -2.62184   TCTGCCTTGATATCA           GCGCGCGGC CGTT GCCGCG-AC            AGCTGCACTGCAGAT  49 2
        secG 2260458 .. 2260488 -  -7.5   -4.3208   CCCCAGAAGTGAAAA      TGCCAGCCG-AAGC TGAA GCAAGCGGCTGGCA       TTAGATAACATTGGT  74 235
   Bphy_2009 NONE
   Bphy_2008 NONE
   Bphy_2007 NONE
   Bphy_2006 NONE
   Bphy_2005 2256897 .. 2256910 -  -2.3  -3.57462   GACGTCATTTCGAAA               GTTCC TCGA GGAGC                TGGTCGATCTTCTCG  49 1
   Bphy_2004 NONE
   Bphy_2003 NONE
   Bphy_2002 NONE
   Bphy_2001 2251558 .. 2251576 -    -3  -3.14881   GAACTGCTGTATCAA             CCCGAATC AGC GATACGGT             GCGTCGGCTGCCTTG  43 13
   Bphy_2000 NONE
   Bphy_1999 2250395 .. 2250407 -  -3.3  -3.48276   GTGTCGTTGACATAA                CAGCC TGT GCCTG                AAGTTAACCTTTGAG  49 29
   Bphy_1998 NONE
   Bphy_1997 NONE
   Bphy_1996 2245286 .. 2245321 -  -4.7  -3.24902   CAACAGCACGATGAA    CCACCCCGCTGCCG ACATTACAG CGGCAGC-GTATGG    GAAATCGCGTTGAGG  48 7
   Bphy_1995 2244987 .. 2245015 -  -8.8  -3.72576   CCCCTTTGCAGCAAA       GGGCGC-GACGGC CGAA ACCGTCAGCGCCG        TTTGACGAGATATTG  71 17
   Bphy_1994 2244314 .. 2244346 - -14.2  -4.63527   CCACGAGCGCAAAAA      GCGAAAACGGCAGC GCAAG GCTGCCGTTCTCGT      TCGACACCGAACGGT 100 54
   Bphy_1993 NONE
   Bphy_1992 NONE
   Bphy_1991 NONE
   Bphy_1990 NONE
   Bphy_1989 2240016 .. 2240028 -  -6.2  -4.50193   ACGAACGAAGCAAAA                CGCC TCTAC GGCG                TGATAGATACGCAAC  76 333
   Bphy_1982 2232966 .. 2233007 -  -2.2  -4.15044   TGCTTCGCGAAGAAA GAGGACACGCTCGCCA-CCG CGCT CGAACGGCTGGCGCGTC-TC TGATATGGCGCGCGC  60 135
   Bphy_1979 NONE
   Bphy_1978 2229114 .. 2229140 - -16.6  -4.73613   GCATGATCAACAAAA         CGAGGCCACGCA TTC CACGTGGCCTCG         CTTTTTCGCATACCT 100 76
   Bphy_1973 2223387 .. 2223404 -  -2.7  -3.78312   AAATCACTGACGAAA             GATCTGA TTGC TCAAACC              TTCCTCAATTTCTTC  52 401
   Bphy_1972 NONE
   Bphy_1971 2215489 .. 2215507 -  -3.7  -3.19175   CGGCAAGACATTGAA             CGTCGCG TCCAT CGCGTCA             TCCGAACAGGCCGTG  45 23
   Bphy_1970 2211819 .. 2211867 -  -8.1  -3.14132   GCCGTCGCCCATCAA CGCCTACGGCC-GCAGCAAGCTCG AAGG CGAGCGGGC-GCTGGCCG-ACGCG GCCGATCTGGGCTGC  55 509
   Bphy_1967 2210389 .. 2210413 -  -3.5  -3.69663   AGGATCAGTTAAGAA          TCCCCGGTG AGTTGGG CATCAGGGA          TTTCCCGTAGAAGGG  51 256
   Bphy_1966 2210139 .. 2210154 - -11.8  -3.91144   TCCACATGTGACAAA              GCCCCG CATG CGGGGC               TTGACGTCGCGACTC  82 87
   Bphy_1965 2209615 .. 2209635 -  -3.1  -3.14132   TTGTCGTCCGATGAA            GTGGCGCAC GCC ATGCGCCGA            AACCCGAATGATGCG  45 61
   Bphy_1964 2208395 .. 2208438 - -11.6  -4.43208   AGATGTTGAAAGAAA CGCTGCCGTG-GCTCGTCGAG ACA CTCGGCGAGGACAAGGCCGCG CAGTTCAAGATCGAA  90 66
   Bphy_1961 NONE
   Bphy_1960 2204086 .. 2204104 - -11.7  -3.81146   TGCTGGAACGAAGAA             GGCGCTC CTTAT GAGCGCC             TTTTTTCGTGCTGCG  80 65
   Bphy_1958 2200332 .. 2200347 - -10.4  -3.28924   GACGCGCGGCGACAA              TCGGCC GCGC GGCCGA               CCCTTTCTGGAAGCC  68 43
   Bphy_1957 2199398 .. 2199421 - -11.6  -4.57073   CACCCTTCCTAAAAA          TGCGGCGCGC TGTC ACGCGCCGCC           GACTGCCGTTGTCAC  95 73
   Bphy_1956 NONE
   Bphy_1955 NONE
   Bphy_1954 NONE
   Bphy_1953 2196215 .. 2196242 - -11.3  -3.66968   AACGATAGAAACGAA        GCCGTGCAGGT CCAGCC ATCTGCACGGC         TTTTGTCTTTTGCGA  77 70
   Bphy_1948 2192207 .. 2192230 - -15.4  -4.54727   GGGTTCAAAGTAAAA          GGCCTTCATC GTCG GATGAAGGCC           TTTTTTCATGCGCAC 100 331
   Bphy_1938 2182030 .. 2182054 - -13.6  -4.72272   GCGCTCCATGAAAAA          CGGCGCATCC GCAGG AGATGCGCCG          CTCATTCTTCTACTC 100 62
   Bphy_1937 NONE
   Bphy_1936 2179314 .. 2179340 - -10.1  -4.08216   TGAGGGCTGCGAAAA        GGCCG-CACCGC AATT GCGGTGGCCGCC         GCCAACACGGCAAAA  80 228
   Bphy_1935 NONE
   Bphy_1934 NONE
   Bphy_1933 2177931 .. 2177944 -  -9.5  -5.40474   ACGGGCGTAAAAAAA               CCGCC AACC GGCGG                TTGCCCGCCTACGAC 100 103
   Bphy_1932 2174804 .. 2174828 -  -6.3  -3.65754   ACAAATCATTTTAAA          GAGCAAGCCCG TTT CAAGCCTGCGC          GGAGTCATCTTCCAG  57 14
   Bphy_1931 NONE
   Bphy_1930 NONE
   Bphy_1929 2172361 .. 2172373 -  -9.1  -3.04461   CATTCAGGTCGAACA                TCCCG CAT CGGGA                CTTGCCTTGACATGA  60 1
   Bphy_1928 2171307 .. 2171325 - -13.1  -4.42639   ATACGCCAATGAAAA             GCCGCGC ACGAG GCGCGGC             TAACGTTACATGCCC 100 59
   Bphy_1925 2169148 .. 2169178 -  -5.4   -4.1552   CACGTCGGCAAGAAA      GC-CGCAGGCCGCC TGCTC GACGGCC-GCACGC      GCGATGGATTTCCGC  64 102
   Bphy_1923 2167559 .. 2167584 - -13.3  -5.26918   ACAGCGCAGAAAAAA         GCCCCGCTTCC AATG GAAAGCGAGGC          AAGAACTGCGGGCAT 100 321
   Bphy_1910 2158224 .. 2158240 -  -2.9  -5.71712   TCCTATAGAAAAAAA              CAACCGG ATT CCAACTG              GAATTACGACTCGGT  95 91
   Bphy_1909 2157523 .. 2157554 -  -5.1  -3.66356   ACTGCTAATCGGAAA      CAGAAGGCGGCTG GCATTG CAATCGCCTTGTG       TTGCAGATCAGCTTC  54 277
   Bphy_1908 NONE
   Bphy_1907 NONE
   Bphy_1906 NONE
   Bphy_1905 NONE
   Bphy_1904 NONE
   Bphy_1903 NONE
   Bphy_1902 NONE
   Bphy_1901 2154082 .. 2154099 -  -2.5  -2.72379   GGAACGCTTCAAGCA             GCCTCCG CGTC CGCCGGC              GCGAGTACGTCAGCA  39 1
   Bphy_1900 2153633 .. 2153644 -  -5.8  -3.14564   GTATTTCGTGATCAA                GCAG CCTC CTGC                 AGTTGAATTCCCATC  50 10
   Bphy_1899 NONE
   Bphy_1898 NONE
   Bphy_1897 NONE
   Bphy_1896 NONE
   Bphy_1895 NONE
   Bphy_1894 2151010 .. 2151035 -    -4  -3.29144   CCACTGCGGTCACAA        CCAGCGCGG-CG GCTC CGACCGC-CTGA         GCGACGTGAACGCGC  47 174
   Bphy_1893 2150136 .. 2150160 - -13.6  -5.69262   GCACAAAAACAAAAA         GCCCGCC-GTC TTTC GACTGGCGGGC          TCGTGAATTTGTGCC 100 215
   Bphy_1892 NONE
   Bphy_1891 2148946 .. 2148969 -  -3.8  -2.78463   ATGCTTTTCACCAGA          GCAGTGCATCG CGA CG-TGCAGCGC          CAGTCCGCGCGCGTC  41 39
   Bphy_1890 NONE
   Bphy_1889 NONE
   Bphy_1888 2145876 .. 2145890 -    -5  -2.52464   TGCCGGTGGAATCGA               CGATGA GTG TCATCA               GAAAAGAACCCTGCG  42 23
   Bphy_1887 2144193 .. 2144212 -   -15  -3.53031   CTCAGCTGAAACGAA            GACGCGCC CGAA GGCGCGTC             AAGGACTATTGCGGT  90 31
   Bphy_1886 NONE
   Bphy_1885 NONE
   Bphy_1884 NONE
   Bphy_1883 2141111 .. 2141126 - -11.8  -4.98531   CCTTCAAATGAAAAA              GCCGCC CGAA GGCGGC               CTGTCTTTTTCGAGT 100 49
   Bphy_1882 NONE
   Bphy_1881 NONE
   Bphy_1880 NONE
   Bphy_1879 NONE
   Bphy_1878 2137444 .. 2137472 - -13.2  -4.36914   GGGCTCTCCAGAAAA       GC-GAAAGCCGCC CTAA GGCGGCTCTCAGC        GGTGCGGTTTTACCT 100 40
   Bphy_1877 NONE
   Bphy_1876 2136708 .. 2136722 -  -2.8  -3.91412   ACGAGACGCGACAAA               GGCA ACGTCCA TGCC               TCGTGCGGCCCCCAG  54 66
   Bphy_1875 NONE
   Bphy_1874 NONE
   Bphy_1873 NONE
   Bphy_1872 NONE
   Bphy_1871 NONE
   Bphy_1870 NONE
   Bphy_1869 2128744 .. 2128754 -  -3.2  -2.84098   TGTTGGAAGCAATCA                 GACG GTC CATC                 GATAGTCCTTAGGAA  42 34
   Bphy_1868 2127778 .. 2127792 -  -7.1  -3.63515   TTTCATCGGTAACAA               GCACG GCGGT CGTGC               CCTCTGGTGGTTGCC  60 114
   Bphy_1864 NONE
   Bphy_1863 NONE
   Bphy_1862 NONE
   Bphy_1861 2122992 .. 2123007 - -11.8  -5.45652   ATGGGCAATAAAAAA              CCCCGC CGAA GCGGGG               TTGGGGTCATCGTTT 100 32
   Bphy_1860 NONE
   Bphy_1859 2122285 .. 2122296 -  -5.8  -2.57721   GAAGTGAGGAACTTA                GCCA TTAT TGGC                 TCGCCGCGACGGGCG  46 18
   Bphy_1858 2121484 .. 2121511 -  -9.8  -2.66787   CGAAGATTGATACTA        TTGCCGAGGCCC TCGA GGCCCTAGGCAA         ACATCTCGAAATTGG  56 423
   Bphy_1854 2118545 .. 2118563 - -12.4  -3.07816   GGCTGATGGAGTGAA             TGCGGCGC ACG ACGCCGCA             TGCTCATTCGCCCAC  72 29
   Bphy_1852 2117146 .. 2117158 -  -3.4  -4.00443   CGACCAGCAAAAACA                GATG CACAC CATC                GAGATTCATACGAAC  58 112
   Bphy_1850 2114778 .. 2114812 -  -8.4  -4.09685   GGTGAGCCTCGAAAA     GCAGGTCGAAGAGGCG TTG CGCCGCTTCGAGCAGG     AAGTCGGCGAGCGCC  72 311
   Bphy_1848 2111336 .. 2111352 - -10.8  -3.53343   AAGCCGTTCGGCAAA              GCCGCC TTCAT GGCGGC              GTCCGCGGGACAGAA  69 300
   Bphy_1845 NONE
   Bphy_1844 2108269 .. 2108282 -  -2.3  -3.18735   TCAATATGGCATCAA               CGGGA AAGG TGCCG                CAAGCGCGCCGTTGT  43 64
   Bphy_1843 2107882 .. 2107898 -  -7.9   -2.7264   AAACTGCGGGCAAAG              CCATCGC TGA GCGAGGG              GACGCGCGCTGGGCC  53 74
   Bphy_1839 2102298 .. 2102312 -  -5.6  -3.08197   GCCCAGATACAGATA               CTGCGC GCC GAGCAG               CGAAAGAAACTCTTC  49 228
   Bphy_1836 2097921 .. 2097957 -    -5  -2.70932   CGTGCGTCGCAACGA   TGCGC-GATGCTCACGC CCGT GCTTGCGCGCCCGCGCA    TCAGCCGCGCGTGTG  43 26
   Bphy_1835 NONE
   Bphy_1834 NONE
   Bphy_1833 NONE
   Bphy_1832 NONE
   Bphy_1831 2090928 .. 2090945 -  -2.6  -3.05343   CGCACATCGGCAAGA             TCGTGC TGCTGT GCACGC              TATCGGATTTCCTGC  42 517
   Bphy_1829 2089488 .. 2089509 -  -2.2  -3.14344   CAGGTCGCGCATCAA           CAGGCGACG TTTCT CG-CGCGTG           CGTTGAAGTGCCGTG  42 335
   Bphy_1827 2087338 .. 2087360 -  -5.5  -3.51232   CGCCGCCGAAAGGAA           CCGGCAGAT TTCAC ACGTGCCGG           CGTTTCTTTGCGGCC  55 13
   Bphy_1825 2084963 .. 2084988 -    -9  -3.55444   TGTCCATCTCCCAAA         CGCGTCAGACG AGAAA CGCCTG-CGCG         AGACGCACCCAATAC  66 4
   Bphy_1824 2083544 .. 2083556 -  -4.7   -5.5112   GCGACGAAGAAAAAA                CCGGC AAC GCCGT                GCGGCAGGCAAGAAC  91 71
   Bphy_1821 2078456 .. 2078483 - -11.2  -4.10925   ACAGACGCTGCAAAA        GCGCGCGCCG CGTCGGGT CGGCGAGCGC         GGCGAACGTGCGGTC  84 181
   Bphy_1819 NONE
   Bphy_1818 2076580 .. 2076595 - -11.8  -2.72461   GAAGGGCGCGTAAAT              CGCGCG ACAC CGCGCG               CAAAACGTTGGCCAG  65 370
   Bphy_1815 NONE
   Bphy_1814 NONE
   Bphy_1813 NONE
   Bphy_1812 NONE
   Bphy_1811 NONE
   Bphy_1810 NONE
   Bphy_1809 NONE
   Bphy_1808 2066811 .. 2066821 -  -6.8   -3.3353   CGTCCGACAAAGATA                 GACG CAT CGTC                 ACGCGGCGCGCAACC  56 274
   Bphy_1807 2065925 .. 2065949 -  -7.7  -2.94412   CGGAACTGGAAATTA          TCCTTGCGCGC AGC GCGCGCTCGAA          CCGGCCGCCGTGCGA  54 105
   Bphy_1805 2063797 .. 2063811 -  -4.2  -4.08064   AAGGCCGCCGCAAAA               CGCATC GTC AACGCG               CCGTGTCTTCGAGCG  61 18
   Bphy_1804 2062062 .. 2062081 -  -9.2  -2.57092   AACGCGACGAACTGA            TCGGCCGA AGAA TCGGCCGC             GATATCGTGCAGATC  55 216
   Bphy_1802 NONE
   Bphy_1801 2058707 .. 2058727 -  -6.7   -5.4505   TCCGCGAAGAAAAAA            CCGGCAACG CCG CGCCGCAGG            CAAGAACATCGACTG  95 69
   Bphy_1796 2051882 .. 2051913 -  -5.8  -3.71378   CATCGGAGATGGAAA      TGAGCAA-CGTGCGA CAT TCGCTCGCCTGCTCG      GTCATCGGCGACCGC  60 234
   Bphy_1794 NONE
   Bphy_1793 2048097 .. 2048116 -  -3.4  -2.71712   CGTGGTCTGCGAAAC            CGTGCTGA TGCA TCTGCCCG             CCGACGCGATCACGG  40 310
   Bphy_1791 NONE
   Bphy_1790 2045860 .. 2045898 -  -4.5  -3.17723   GGATGCTGAAGTGAA  GTCGTGCCGCCG-TCCATG TTG CATTGCGCCGCGGCACG-C  AGCGTGGTCAATGCC  48 33
   Bphy_1789 2045005 .. 2045019 -  -3.4  -3.40867   CGATGTACGAAGGAA               CGGTCG GGA CACCCG               ATTACTTGAGGCTGC  47 27
   Bphy_1788 NONE
        argD NONE
   Bphy_1786 NONE
   Bphy_1785 NONE
        astD NONE
   Bphy_1783 NONE
   Bphy_1782 2036575 .. 2036595 -  -6.7   -5.4505   CCCGCGAAGAAAAAA            CCGGCAACG CCG CGCCGCAGG            CAACAACAGCGACTG  95 57
   Bphy_1781 NONE
   Bphy_1780 2034708 .. 2034740 - -20.7  -5.11937   AACAAGGCCAAAAAA      GCACAACCGGCCG TTCGAGG CGGCCGGTTGTGC      TGCTGTCGCTGCGAT 100 65
   Bphy_1779 2032804 .. 2032828 -  -3.6  -3.35996   CATCTTTATCGAGAA         CGCACGCGATC CGAA AAT-GCATGCG          CGACTGCCGCAGTGG  47 334
   Bphy_1776 NONE
   Bphy_1775 2027266 .. 2027286 -  -7.5  -4.19817   GGCACGTAGCTAAAA            GCGCGGC GCATGAA GCCGCAC            CGCTCACCCGCCACC  71 52
   Bphy_1774 2026382 .. 2026415 - -10.2  -2.52896   TGATTTTGCAATCGA     CGCGTCGCGCAAGG GTCTTT CTTCGCGCGATGCG      ATCGAGCAGGCCTGT  58 335
   Bphy_1770 2018004 .. 2018025 -  -7.9  -3.58536   AAACGGACCGGCAAA           GCCTGCTGA CGGG CCTGCAGGC            AGCAGCGGGCGACGA  63 400
   Bphy_1767 2015607 .. 2015624 -  -3.5  -3.51924   TCGGGAGCGACAGAA             GATGCCAT GCG AT-GCATC             GACCGATGCAGAGGA  49 94
   Bphy_1766 2014652 .. 2014664 -  -4.7  -2.81471   GACAATTCCACCACA                TCGCC CCG GGCGT                GGCAGCCGGCGTTTT  43 66
   Bphy_1765 2013749 .. 2013795 -  -8.7  -3.72576   GCCTGTGGGATGAAA CGGATGCGCTTGCCGCATCGAC GATG ATC-ACGTCGCAAGCGCTTCCG TACATTGCGCTGCTC  67 154
   Bphy_1760 2008823 .. 2008858 -  -8.2  -2.64912   TGGTCAATCGATAAT    CGCGCGC-GGCGCTT CACGGGC ACGCGCCTGCTCGCG    CAAGCCGTCCTGTCG  53 258
   Bphy_1757 2007312 .. 2007322 -  -3.2  -2.82015   CCGATACGCATGAGA                 CGCA CAC TACG                 TCCCGGCGGCGATGT  41 84
   Bphy_1756 2006783 .. 2006802 -  -9.2  -5.40474   ATTTGGTTAAAAAAA            GACGGGGC GCCC GCCCCGTG             CTTGCGCATGCTGCT 100 45
   Bphy_1755 2005915 .. 2005931 -  -6.5  -3.14931   GTGACTGTGCAGCAA              CCGTTCA GGT TGCACGG              GACGGGAGACGCCAA  54 172
   Bphy_1754 2003197 .. 2003226 - -10.6  -3.56704   CCCGCATCAAATGAA       GGGGCGTCTCGC CTGGCC GCGTGACGCCCT        TTTCATTGTCGAAAA  73 51
   Bphy_1752 NONE
   Bphy_1751 2001374 .. 2001384 -  -4.6  -3.15663   ACGCACGCCGAGGAA                 GGCA ATC CGCC                 GCCCGCCGATCAGAC  47 237
   Bphy_1749 1995598 .. 1995612 -  -3.4  -2.78384   GCGCCGCTCATGACA               CGCTCC TCA GATGCG               TGACAAGCGGCCCGA  41 3
   Bphy_1748 NONE
   Bphy_1747 1989666 .. 1989678 -  -6.9  -3.64703   GCCTCGCGAGCGAAA                CCGCA CTG CGCGG                CTGGATGGCCTGGCA  59 200
   Bphy_1745 1988575 .. 1988585 -  -6.8  -3.60098   ATTTCCTACCCGAAA                 TGCG CAA CGCA                 AGCACCGTGTGACGC  60 58
   Bphy_1743 1986178 .. 1986204 - -15.9  -3.95378   GGACAGGGCAAACAA         GCCGAAGCCGT TCAAT ACGGCCTCGGC         TTTTTTGTTTGCGCC  95 525
   Bphy_1740 1985434 .. 1985450 - -10.8  -3.60098   ACCCGGCACGCCAAA              CGCGGC GTGCT GCCGCG              TCGGGAGAATTTCTT  71 142
   Bphy_1738 1984149 .. 1984164 -  -3.2   -4.4595   GGAGAAAATGTAAAA              GCCG GGAATTGG CGGC               GAAACGCCCTCGACG  68 109
   Bphy_1735 1981547 .. 1981558 -  -3.6  -4.33417   CGCACGCACAACAAA                CGCC AGGC GACG                 TCAGCGCAGATCCTC  65 26
   Bphy_1734 1980181 .. 1980211 - -16.1  -2.86449   AGCCCAGCATAACGA      CCCGGCGCGCCGCG GGTT CG-GGCGCGCCTGG       ACCTGCGCTAGCTTT  81 33
   Bphy_1733 NONE
   Bphy_1732 1976674 .. 1976688 - -11.4  -6.07627   AGCGGCAAAAAAAAA               TGGGCG AAA CGCCCA               TCATCTTATTGCCGG 100 309
   Bphy_1731 NONE
        nusA 1974628 .. 1974641 -  -2.3  -3.65902   TGGATCTCATTGAAA               CCAGT GTTC ACGGG                CCTTCATAATCAACG  49 3
        infB 1971570 .. 1971604 -   -15  -5.01422   CGATACAAAAACAAA    GGGGCGGAACCGGGC TTCAGC GCCCG-CCCCGCCCC     TCATGTGCACGACGC 100 46
        rbfA NONE
        truB 1969923 .. 1969963 - -12.6  -2.72471   CGCCGACGAGACAAT GCGACAGCCTGCACCCGGTT TGC ACCCGGG-GC-GGCTGTTGC CTTCCTCGTGAGACG  69 190
   Bphy_1722 1962452 .. 1962504 - -11.4  -5.68039   AAACGCACAAAAAAA CGCAAGCGCCATGCAAAAAGCCGCC CGAG GGCGGCTTTTTGC-TGAGACTTCTG ACGATAGTCTGGAAG 100 53
        sucA 1959268 .. 1959278 -  -4.6  -3.53091   ACGCGGGGCGGGAAA                 GCGC ACA ACGC                 TTTCCCGGTTCGCTC  52 48
   Bphy_1720 1957772 .. 1957795 -   -16  -2.52464   TTTTTGGCTAACCGA          CGCG-GCCGCG CTT CGCGGCGCGCG          TGGCTTCAGATACTG  78 117
   Bphy_1719 1956241 .. 1956272 - -17.3  -3.40867   TGAGGCAGCAATGAA      GAAGGCGGGAGGG ATTCAA CCCACCCGCCTTC       GTCGTGATTCGCGTG  93 71
   Bphy_1718 1955049 .. 1955090 -  -2.1     -3.67   CGAATCTTGAAAATA CAGCG-GTGGCGCCCGCATC AAG GGTTCGCACGCAACACGCTA TCCCAATCCAGATCG  49 59
   Bphy_1717 1954441 .. 1954471 - -11.8  -5.08824   GCCTGACGTAAAAAA       GCCGGCCTGGCA GTCACTT CGCGAGGCCGGC       TTTTTATTTTCATTA 100 68
   Bphy_1715 1952630 .. 1952645 -  -7.6  -3.81879   TGGAAAAGCGAAGAA              GCAATC GGGT GATTGC               GTGAACGCCGCGCAG  67 70
   Bphy_1712 1951668 .. 1951711 -  -2.9  -4.16842   GCCACGGCGAATAAA CATGGCTGCACCGGGCGCGC TGCCG GCGCGCCCG-TCCTCCCGTC ATACGGGCAGACTGG  60 41
   Bphy_1710 1950556 .. 1950569 -  -3.7  -3.04461   CAGGCATCGTCAATA               GCCGC CGCT GCTGC                CGCTCGTCCCGCTGC  43 6
   Bphy_1709 NONE
   Bphy_1708 1949093 .. 1949107 -  -2.1  -3.83026   TGCCTGGATAGCAAA              CGTGTG GACG CAC-CG               CGCTATTCCTGCGGC  52 111
   Bphy_1707 1948460 .. 1948470 -  -8.2  -2.70932   TCCCGCGCCCAAGGA                 CGCG CGT CGCG                 TGGATCGCGTGGATC  53 51
   Bphy_1706 NONE
   Bphy_1705 1946271 .. 1946309 - -10.2  -2.70022   CTGACGGGATACAAG   GTGCCGAAGGTCGTCGAG TTC CGCGACGAGCTTCCGCAA   ACGAACGTCGGCAAG  59 128
   Bphy_1697 1931619 .. 1931656 - -17.7   -3.3482   CAACCTTTGAATGAA   CACGCCGCGATCGTATC GACT GGTCCGATCGCGGCGCG    CCCGATGAGAATGAG  95 98
   Bphy_1696 1930796 .. 1930820 -  -5.5  -2.71731   GCGACGCCTGAAGCA          CGAGGGCCTAC CGT GGATGCCCGCG          TGGATGCCAGCGCAT  46 57
   Bphy_1694 1928102 .. 1928113 -  -2.2  -2.74792   TCATGATGGGGAAAT                GCCT GGGC AAGC                 GGAAAAACTGCAAGT  39 118
   Bphy_1693 1927275 .. 1927287 -  -6.2  -4.93877   TTGGAGGAAAGAAAA                GCGG AGCAG CCGC                GCAGACCGTGCTGGC  84 133
   Bphy_1692 NONE
   Bphy_1691 NONE
   Bphy_1690 1923974 .. 1923984 -  -3.2  -2.92265   ATCGATATATAACGA                 TCAG TAG CCGA                 GTGCTCGCGTCGCCG  42 15
   Bphy_1689 1921445 .. 1921467 -  -9.8   -3.5013   GCGGAAAGGAAGCAA           CGGCCGCTAC GCG GTAGCGACTG           GCGCAGGGTCGAGGT  70 238
   Bphy_1687 1918156 .. 1918183 -  -6.3  -2.87881   CAATGCGGCCAGATA        GCCAGATTCCCG ACTGA CGGGTATCTG-C        AATCGACGCGTGGCA  48 59
   Bphy_1684 1912253 .. 1912268 -  -2.5  -3.53563   ATATCCGCGCCGAAA              CGTGG GGTGAA CCACA               TCCCCTTGCTGATGA  47 120
   Bphy_1683 NONE
   Bphy_1682 1909604 .. 1909625 -  -2.1  -3.88766   AGTCGATACAGGAAA           GCGGACACC AGAC GATCACCGC            CACGAGCGACGGGAT  54 183
   Bphy_1681 NONE
   Bphy_1680 NONE
   Bphy_1679 1905520 .. 1905547 -  -4.8  -3.53091   ATGTTTTTCTGGAAA        CGGCAACACGACA GTC CGTCTTGC-GCCG        GACGCGTGCGTCCCG  52 207
   Bphy_1678 1904458 .. 1904497 -  -2.2  -3.05343   CGCACAGCGGGAAGA TCGCGGC-CAGAGTCGACG TGAGG CG-CGAC-CTGCGGCACGA CCTGGGACGCGACCT  41 72
   Bphy_1677 1903223 .. 1903237 -  -4.2  -3.14261   TAAAAAGCGATGCAA               CGGC GCGTCCG GCCG               ATCACAGAGTCGATT  48 45
   Bphy_1676 1901945 .. 1901965 -    -4    -3.494   CAACCGGCGATAGAA           GCGG-AATG AACG CACTACCGC            GTGAGAGCGGATACG  49 153
   Bphy_1667 1881836 .. 1881846 -  -6.8  -2.61912   GCAGTGAGTGACAAC                 CGAC ATT GTCG                 CCGATGTCGCGTATC  49 102
   Bphy_1666 1880712 .. 1880731 -  -4.2  -3.06991   CATGATGCGGAAAAC            GAAAGCGG CCAG CCGGCTTC             TCATCCGCTCAACTG  46 90
   Bphy_1665 1879711 .. 1879729 -  -6.6   -2.6072   CATCGAACGAAGTGA             TCCGCAAG CTG CGCGCGGA             AGTCGGCGGCGACGT  47 250
   Bphy_1660 NONE
   Bphy_1659 1874655 .. 1874681 -  -5.6  -3.72695   AGTCGCCTGATGAAA         GGCCGCGTGACG ATC CTCCTCGCGGCT         CGCCCGTCACACCCT  60 441
   Bphy_1656 1873742 .. 1873754 -  -3.3  -4.07885   CACGCGTCGTGAAAA                CGCGT GAC AGGCG                GCCGACGGCCCGATC  59 180
   Bphy_1655 1873083 .. 1873107 -  -4.2  -2.74461   CACGCAGCGCGAAAT         CGCCGAACGCG CCTA CGCGCTTG-CG          CAGCGAGAACCCAAG  42 312
   Bphy_1653 1871449 .. 1871486 - -18.6  -4.25283   ACTTGTTCAGTAAAA  CCGGC-AGCGCAACG-GG TGGC CCGCGTTGCGCTCGCCGG   CCTCGCCGGCTATTG 100 35
   Bphy_1652 1870171 .. 1870181 -  -3.2  -2.61383   ATGGCGAGCGAGAAC                 TGAG CGC CCCA                 CCCGCATCTGCTGCC  40 89
   Bphy_1649 1867948 .. 1867964 -  -8.7  -2.57344   GACTCCCTGTAGAAG              CGATGCG TGG CACATCG              AGCCATCTGGTTCAG  56 37
   Bphy_1648 NONE
   Bphy_1647 NONE
   Bphy_1646 1865613 .. 1865640 -    -9  -3.57144   GCGCCGATGGTGAAA        CCGCCGCCGGCAG CGG CATCCGGCG-CGG        CGAGCGCGACGAATC  65 196
   Bphy_1644 NONE
   Bphy_1643 1864699 .. 1864713 -  -3.5  -5.18371   GTCGATAAAATAAAA               CGGCT TGCTT AACCG               CCCGCCGCCAGCAGT  84 19
   Bphy_1641 1862468 .. 1862493 - -14.1  -5.08255   AGTGCCAAAACAAAA         CGGCATTGCGA TTGC TCACAATGCCG          TTGCTGGAAATATCT 100 217
   Bphy_1638 1859316 .. 1859344 -  -5.9  -5.09225   ATGGTATCGAAAAAA        GCGGGGCCGAA GCGCGCG TTCTGCCCGGC        TTGATGGCGAGCGCG  85 161
   Bphy_1637 1858111 .. 1858131 -  -2.5  -2.93549   GATTCGGAACAATGA           CG-CCGCC TTTTAT GACGGACG            CTTACTCAGAATCCG  40 31
   Bphy_1636 1857226 .. 1857259 -    -8  -2.57132   TCCCGCTGTCACAAT     TGCCG-CGCGCCGCG CAGAT CGCGGCGCAACTGCT     GCCGCTCGTGCATGC  50 234
   Bphy_1633 1854667 .. 1854696 - -15.7  -3.75153   CGCCGGGAATGTAAA       GCCCGCGCCTGTGC CCG GCTCAGGCGCG-GC       GAACGCCAACGGCAC  90 228
   Bphy_1629 1851721 .. 1851738 - -14.1  -3.56643   GGCACATTGCCGAAA             GCGCGCC CGAG GGCGCGC              CTTGCTCAAACTTCG  88 54
   Bphy_1628 NONE
   Bphy_1627 NONE
   Bphy_1626 1848648 .. 1848699 - -12.2  -2.71712   TGCCTGGTTCGAAAT GC-GCACGGTGTGCGGCTCAATGTG CCG CTCATTGTGCCGCTCATTGTGCCGC TCAATGTGCCGGAAA  69 26
   Bphy_1625 1847625 .. 1847639 -  -7.1  -4.87665   CGCCATCGATAAAAA               CGCGA GCCTG TCGCG               CGGCACGCGTTGACT  88 51
   Bphy_1624 1846432 .. 1846470 - -18.2  -2.76272   AAACAAACGACAGGA   CGAATGCCTGCACTGCGC GAC GCGCGATACAGGCATCCG   GGTCTTCAGGGAGAC  86 103
   Bphy_1623 1844719 .. 1844745 - -19.5  -3.56704   GCTTGACGAAACGAA         CGCCGCCGTGA CGGGT TCACGGCGGCG         CGCAGGTGGGGCGCC 100 236
   Bphy_1619 1839588 .. 1839612 -  -6.4  -4.57474   GCAATCGACAGAAAA         CGGCG-GCG GCTCTTCA CGCTCGCCG          CGCTGGGCGCAGTAT  79 361
   Bphy_1616 1836706 .. 1836718 - -10.5  -3.64822   ATGCGTTCATGGAAA                GCGGC TGC GCCGC                CAGCCCTATTGAATC  73 31
   Bphy_1615 1835748 .. 1835773 -  -7.6  -3.14132   GTGTGGCCCGATCAA         CGATCTCGAA GAGGTG TTCGAGAACG          AGCAGGTGGTCGCGC  55 377
        alaS 1831751 .. 1831775 - -13.6  -6.04953   ATATAAACAAAAAAA          GCCGCAAGTC CTATC GACTCGCGGC          CTTCTTTTATGCATA 100 87
   Bphy_1611 NONE
   Bphy_1610 NONE
   Bphy_1609 1827002 .. 1827012 -  -2.4  -3.61398   CGTTCGGTTGAAGAA                 GGTG CGG CGCC                 TACATGGACTCCTGT  49 25
   Bphy_1608 NONE
   Bphy_1607 NONE
   Bphy_1606 NONE
   Bphy_1605 1823555 .. 1823565 -  -2.4  -2.94595   AATCTCCAGCAGAGA                 GCTC ATC GCGC                 GGCTCCCTGCATCGA  40 17
   Bphy_1604 1822594 .. 1822626 -  -3.2  -4.86731   CCGCGGCAAAGAAAA      GTAGGTGCCGCCCC GCACA GGGGCAACACTGGC      CAACCAGAAGCAAAC  74 246
   Bphy_1596 NONE
   Bphy_1595 NONE
   Bphy_1594 1809435 .. 1809458 -  -4.4  -3.20361   AAAATTTTAACGTAA          GCGCCCCGAA CGCG CCCAGGCCGC           GAAAACCCGGACGCG  48 51
   Bphy_1593 1809085 .. 1809096 -  -2.2  -4.94243   GCAAAAAAACCAAAA                CAGGC AAC GCC-G                CGCCGCAGGCAAAAC  75 66
   Bphy_1590 NONE
   Bphy_1589 1801475 .. 1801526 -  -6.5  -3.02144   CGATGCTGCCCAAGA CGCGCTCCGGCAAGCTGTTGCG-CC GCGC GATCGCGGC-GCTTGCCGAAGGACG CGACCCCGGCGACCT  50 159
   Bphy_1586 1795702 .. 1795714 -  -6.9  -2.57463   AAGGTCGGCGACAAG                GCCGA TAT CCGGC                TGATGAGCGGCGGCA  47 401
   Bphy_1581 1789890 .. 1789900 -  -5.4  -3.56704   GCCGCAGGAAAGTAA                 GCAA GTG TTGC                 GGCGCGACAGCGGGA  57 94
   Bphy_1580 1789330 .. 1789349 -    -2  -3.50853   TGGCTTGAAGCAGAA            CTGGCGAA ACCG TTCGCGGG             AAAGACGATCGTGGT  47 316
   Bphy_1575 1784647 .. 1784677 -  -3.1  -4.07568   CGCCGCCCCGCAAAA      CGCTCAAGCCGCGC TCAT GC-CGTCTGGCGCG       GCAAGGCCGCCGCCC  59 9
   Bphy_1571 1781023 .. 1781041 - -13.1  -5.36441   GGCGGACACAAAAAA             GCGCGCG GATCA CGCGCGC             TTCAGGATGATGCAG 100 94
   Bphy_1570 NONE
   Bphy_1569 1777734 .. 1777767 -  -7.3  -3.86015   GACGCCCGTCAGAAA     CCGTCAAGCCTGC-CG GAT CGAGCCGGCGTTACGG     CGCGCTGGCGGCGAT  65 20
   Bphy_1568 1776202 .. 1776220 -   -16    -5.252   GAGTTCGACAAAAAA             CGCCGCTC GAC GAGCGGCG             TTTTTGCGTCATGGC 100 57
   Bphy_1566 1773500 .. 1773545 -  -6.8  -2.71144   CACGGGCGTCAATGA TCGCGCGTTTCGCATG-TTCG TGCTG CGAGTCGTGCGAAACGCGAGG CGCCCGTCACGACAG  50 32
   Bphy_1565 1772641 .. 1772671 -  -3.8  -3.03124   CTGGACGTTCGAAGA       CTTGAGCGCCACGC GGC GCGTCGCGGTGGAG       CTGACGCCGCGTGAA  44 262
   Bphy_1563 NONE
   Bphy_1562 1770611 .. 1770640 - -19.3  -4.17762   GAGCGCCCAAAAGAA       GAGCGGGCGCGAC CTGC GTCGCGCCCGCTT        TGCGGCAACCGCACC 100 63
   Bphy_1561 1769505 .. 1769522 -  -2.6  -4.11216   GCGCGATGCGTAAAA             CCGCTC GGTCGA GACCGG              TCAACGTCGCCGCGC  57 51
   Bphy_1560 NONE
   Bphy_1559 1766404 .. 1766429 - -16.1  -5.93809   CCGGGACAAAAAAAA         TGCGGCCCCGC TTTC GAGGGGCCGCA          TTCACGTTTCTGCGT 100 388
        thrS 1764318 .. 1764332 -  -3.5  -2.79183   TCGACTCCGACCAGA               CGCAC TTCAG GTGCA               GTAATTTCACCGTTT  41 120
   Bphy_1557 1763816 .. 1763842 -    -8   -3.1506   AAACTTTCCGACGAA         CGCCGCGCAT GCTTGAG ATGCACAGCG         GGCGTCTGCTTACTT  57 35
        rpmI NONE
        rplT 1762912 .. 1762931 - -10.7   -5.5112   TCGACCAACAAAAAA            GGGGCTC GGTGAG GAGCCCC             GTTTTTGTTGCAGCG 100 103
        pheS 1761827 .. 1761850 - -10.2  -3.57144   CCGCGCATGCTTAAA          GCCTGCTCGC TCAA GCGAACTGGC           GCAGGAAACGCAGGT  73 12
        pheT NONE
   Bphy_1552 NONE
   Bphy_1551 1758168 .. 1758193 - -14.1  -4.65895   CCGCGCAGTTAAAAA         GGACTTACGGC TTTC ACCGTAAGTCC          TTTTTTGTCCATCTG 100 187
   Bphy_1549 NONE
   Bphy_1548 1749973 .. 1749987 -  -4.2  -3.20723   GTGCGACTAAGTGAA               CGGC CGTCAGT GCCG               GTGCCGATGCCGGTG  48 17
   Bphy_1547 1749109 .. 1749135 - -16.6  -4.33105   GAACGATGAGCAAAA         GCCCGTATCGTC GTC GACGGTACGGGC         TTTTCCTACGCGTCA 100 61
   Bphy_1541 NONE
   Bphy_1540 1740257 .. 1740268 -  -2.2  -2.87132   TGCGTGGGTCAGACA                CG-CG AGA CGTCG                AATTGCGCCTTGCTG  40 7
   Bphy_1539 NONE
   Bphy_1538 1737440 .. 1737452 -  -4.8  -3.53012   GCGTGCGGGGCGAAA                TCGC CGGCT GCGA                AGACGTAACGCCCGC  52 47
   Bphy_1536 1735025 .. 1735035 -  -2.4  -3.33696   CTTCGCTCGAACGAA                 GCCG GGG CGCC                 GTATTGCAGGGGTGC  44 72
   Bphy_1535 NONE
   Bphy_1534 NONE
   Bphy_1533 NONE
   Bphy_1532 1728899 .. 1728910 -  -4.4  -3.44848   TGCCGGGACGAAATA                CGTA AGTA TACG                 GGGTTGTGGATGGGG  52 319
   Bphy_1531 1727952 .. 1727962 -  -2.4  -3.57144   GTGCTTACTTGGAAA                 CGTC TTT GCCG                 AAGTACTTCTCGGAG  49 4
   Bphy_1530 NONE
   Bphy_1529 1726426 .. 1726443 -  -8.3  -4.06502   GACGCGCAAAGCAAA             GGCCGCC CGGG GGCGCCC              TCGAAGCGACTCATA  71 53
   Bphy_1528 NONE
   Bphy_1527 1725189 .. 1725202 -  -4.5  -4.07568   CTGCTCTCCCCAAAA               CGCGGC ACC GCC-CG               GCTTAGAGAGCCATT  61 359
   Bphy_1526 1722897 .. 1722930 - -11.7  -3.14132   CGGTCTTCCTACGAA     CGCTGGCGTGCTATC CCGA GACACCACGCCAGCT      TTCCAGCCGTGATCA  69 38
   Bphy_1523 1719186 .. 1719214 - -18.2   -5.4833   GCAGGCAACAAAAAA        GCCCGCGTAACG CAATC CGTCACGCGGGC        TTTTTAGACGGCTGC 100 63
   Bphy_1516 1710202 .. 1710217 -  -4.6  -2.50816   GGGGCAGCGAGCAAT              GGCTCG ACGT CGAGAC               GATCGTGGTGTGCGC  43 246
   Bphy_1514 1707124 .. 1707149 - -19.1  -3.82946   CGACGCCAAACACAA         CGGCGGCTCAT CCGC ATGAGCCGCCG          CGCCGTTTCCCCGTG 100 76
   Bphy_1511 NONE
   Bphy_1510 1704375 .. 1704409 -  -2.1  -3.54424   CGGTAGTGTGGGAAA    TGCGCACGCTGCAGC CGGCTAT GCCGC-GCG-GCGTA    TCGGCGCGCGCCTCG  47 55
   Bphy_1509 1703792 .. 1703807 -  -7.5  -2.79098   GCCAGGCATCAATCA              GCCGC TTATTC GCGGC               CCGTCAACAGATCGG  50 15
   Bphy_1508 NONE
   Bphy_1507 1702558 .. 1702572 -  -5.6  -2.92192   TCCCACTCAAGCACA               CGATCG AAC CGTTCG               TCCCGGTTTATCGCT  48 33
   Bphy_1498 1692980 .. 1692991 -  -2.2  -3.05596   TAGTTGTCGACTGAA                CAGA ACAA TCCG                 TGAACGCCTTGCGGC  41 153
   Bphy_1497 1692657 .. 1692669 -  -4.1  -3.09015   CTCAGATCGAGCGAA                TTACG CGT CGCAA                TGATGCAGCGAACAG  43 13
   Bphy_1496 NONE
   Bphy_1495 NONE
   Bphy_1494 1690056 .. 1690081 -  -4.8  -2.72855   GAAAGCCGGGAACCA        GCGCGA-GCTTG AGCG CAAGCATCG-GC         TATTCCTTGACGAGC  43 25
   Bphy_1493 1689297 .. 1689314 -  -8.3  -2.59526   CAGAAATTCAATCGA             GCGCGGC GAGC GGCGCGC              GCGGCTTGTGCGACA  52 0
   Bphy_1492 1688764 .. 1688785 - -10.1  -3.70149   CGCACAGGACTGAAA           CGGGTCAGC TTCG GCTGATCCG            TTTTTTATGGCGTCA  73 30
   Bphy_1488 1680074 .. 1680107 -  -3.7  -3.24232   CGGCGCGCAAAGACA     GCTATGGCGGC-GCCG CGG CGGCAATCGCAATGGC     AGGCCTGCCGCAAGC  47 317
   Bphy_1486 NONE
   Bphy_1485 1676105 .. 1676124 -  -2.1  -4.07675   GGAAAAGGAAGGAAA            CGTGG ACAGGATAAA CCACG             TCGGGCGTCGGCGTT  57 181
   Bphy_1484 NONE
   Bphy_1483 NONE
   Bphy_1481 1671797 .. 1671815 -   -16  -4.88407   CGATCCAACGAAAAA             GGGACGGC GCC GCCGTCCC             TTCATGACCGATCGC 100 92
   Bphy_1480 NONE
   Bphy_1479 1668943 .. 1668975 - -21.3  -4.36903   GGCAGCAAAGACAAA      GCGGCTCGATGGCGC ATC ACGCCGTCGAGCCGC      TTTCGTTGTGCCACA 100 79
   Bphy_1477 1665895 .. 1665914 -  -3.5  -4.07568   CGTCCGGTGCGAAAA            GCGCG AACGATCTGG CGCGC             GAGATCAACGAGCGC  60 493
        aceE NONE
   Bphy_1469 1651936 .. 1651968 - -12.8  -2.90723   GCAGGTTCAACGAGA     GCGCCCGAATGACCG TATC CGATCAT-CGAGCGC      TAGCGACACAACCTC  70 46
   Bphy_1468 1649587 .. 1649616 - -21.5  -4.72986   GACGCCCATGAAAAA       CGGCGCGCCCTTC TTCC GAAGGACGCGCCG        TTTGCACATGCACTG 100 75
   Bphy_1466 1646733 .. 1646754 - -15.9  -3.38162   ACGCAATAAATGCAA           GAAGCCCCG CATG CGGGGCTTC            TTAGTTTTCGTCGGG  89 56
   Bphy_1464 1644985 .. 1645005 -  -3.2  -3.23853   GCTGGCGAAGCAACA            TTCACGCG TCGCC CGCAAGAA            CCTGCGCGATGTGCA  45 6
   Bphy_1463 1643450 .. 1643479 -   -18  -4.19624   GATCCGGAAGACAAA       GAGGCTGCATCG GGCGAG CGATGCAGCCTC        TTTCAATAGCAGCGA 100 63
   Bphy_1461 1642352 .. 1642377 -  -3.2  -4.08706   CCGCGATTATACAAA         GCCGTGCAAA ATCACG CCTGCACCGC          GTCAGCACGTGCTCA  59 50
   Bphy_1460 1641695 .. 1641717 -    -2  -4.05446   TTGGTCAAGTATAAA           TACATGAC GGATTTA GTCAAGTA           TCCCTATCTCGATTT  57 69
   Bphy_1459 NONE
   Bphy_1458 NONE
   Bphy_1457 1639287 .. 1639339 -    -4  -2.71712   GCCTGCTTCCCAAAT CGTTCCGGCG-GGCGTCGAATTCAA GTAC TCGAATCCAGCGCCGCGCCGTGCCA CTCCGGCGCGTTCGT  41 51
   Bphy_1456 1638857 .. 1638872 - -11.8  -5.22039   GCGAAATTGAAAAAA              GGCGGC ACAG GCCGCC               TTTTCAGCATGACTC 100 47
        hscB NONE
        hscA 1636291 .. 1636301 -  -6.8  -2.90075   GCCGCGTGAATCAGA                 GCTC GTC GAGC                 TTCTTGCCCGCGAGT  51 10
   Bphy_1453 NONE
   Bphy_1452 1635584 .. 1635613 - -19.5  -3.63515   TTTGAGCCGCAAGAA       GAAAGGCGACTTC CTCG GAAGTCGCCTTTC        TTTTTCAAGCTGCTG 100 48
   Bphy_1446 1626660 .. 1626672 -  -3.3  -3.38272   GACGATCATTCATAA                CGCAG CGC CTCCG                CCGGACGCACCTTTG  47 3
   Bphy_1445 1625919 .. 1625938 -  -4.2  -3.66874   TCAACGGTACTCAAA            CGGGGA-CC GTC GGCTCCTCG            TACAGCACGCCATCG  54 1
   Bphy_1444 NONE
   Bphy_1443 NONE
   Bphy_1442 1621488 .. 1621500 -  -5.5  -4.56597   TGCTCGCGGGAAAAA                CGGAT TAT ACCCG                AACGCGTGCTTCCAG  74 139
        pyrG NONE
   Bphy_1440 1618914 .. 1618942 -   -16  -2.78384   TCGGGTTGGAGCACA        CGTGCAGCGCCG GACCG CGACGCCGCACG        CGTGATTGCATCAGT  79 36
         eno 1617518 .. 1617532 -  -4.3  -3.08032   TCTGTCTCAAAAGCA               TGAAC CGAAC GTTCA               ACGCAGGTTGTAGAA  46 23
        ftsB 1616872 .. 1616895 - -18.2  -5.07652   CTCGCCAAAACAAAA          GGCGCGGTTC GCAT GAACCGCGCC           TTGTTCGTAAGGCCG 100 68
   Bphy_1434 1613688 .. 1613739 -  -4.4  -2.93858   GATTATATCGAGATA GTCGCGCCGCCG-CTGACG-ACAAC CCCAC GCCGCGCGTCAGCCGTCCGCGCG-C TGCTGCGTTTCAAGG  45 10
   Bphy_1433 1612748 .. 1612766 -  -6.6  -2.99319   AATCCGCGACAGATA             CTAGGCGC AGA ACGCCTCG             ATAAGCGCCGCGACC  52 7
   Bphy_1432 NONE
   Bphy_1431 1611081 .. 1611098 -  -2.5  -3.65046   GCTCTATTGTAACAA             CGGCGCC TTGC GGCTCTG              TCGGCTTTCGCTCAT  49 48
   Bphy_1430 NONE
   Bphy_1429 NONE
   Bphy_1428 NONE
   Bphy_1427 1607591 .. 1607630 -  -3.5   -5.0538   CGTCAGTTGAAAAAA TGC-CGGAAG-GCGCCTGA AAAA CCAGACGCTCAGCCGAGCA  GCCCTGCCTCGCGCA  80 15
   Bphy_1426 NONE
   Bphy_1425 1605520 .. 1605558 - -28.4  -4.56597   GTGGCCGGCCAAAAA   CAGAAACGCCCGTGACGC GCC ACGTCACGGGCGTTTCTG   TTTTTGCTCCAGCGA 100 50
         ndk 1604015 .. 1604025 -  -4.6  -3.14132   CTGCTGTGTGACGAA                 GCGC TTA ACGC                 GAGTAGACGTTGACT  48 19
   Bphy_1422 NONE
   Bphy_1421 1601401 .. 1601426 - -16.1   -4.7629   GCATGAATTGAAAAA         GCGCCGCAGCC CCGA AGCCGCGGCGC          ACGCGATTGATTTGC 100 42
        ispG 1600009 .. 1600029 -  -3.2  -2.71483   AGATGGGGCGAATCA           GTTCGTCGC TTCG GCG-CGGAC            CGCGTTGGGCCCATA  41 2
        hisS 1598545 .. 1598555 -  -2.4  -2.52464   CGTCGTGGTAACTCA                 TCGC GAC GCGT                 TTTCCTTTCGTGGTG  37 102
   Bphy_1418 1597891 .. 1597925 - -13.6  -3.39521   TTGATCAAAAGGTAA    CGGC-GGGCGTTGCG GCAACG CGCAACGCTCAGCCG     CCCAGCGCGTCGAGC  81 19
   Bphy_1417 1596629 .. 1596660 - -10.8  -4.26903   GGGACGCCAGTAAAA      CAGCTGC-GGCCGGC AAA GCCGGCCTGCAATCG      CCGCACGGCGCCCCC  84 70
        engA 1594933 .. 1594957 -  -2.7  -3.17392   CAGCCCGGAATTCAA          GCCGGGAATCA GCC TGCCTCACAGC          CTTCTGTCAGTCCTT  43 32
         hfq 1594485 .. 1594527 - -11.9  -3.68366   GGATGTCAAAATGAA GCGGCCGGGC-AGTGTCGCC TGCG GACGAGGCTCGACCGGCCGC GACGAAGGGTTAGGA  77 35
   Bphy_1414 NONE
   Bphy_1413 NONE
   Bphy_1412 NONE
   Bphy_1411 1590598 .. 1590617 -  -7.1  -4.77036   CGCGATCATCAAAAA            CGAAGCG GGACGT CGCCTCG             TGAGCGACGCCCGAT  85 54
        hisZ 1589144 .. 1589159 -  -7.5  -3.55563   ACCGCATCGTCCAAA              GGCCG TCGCTG CGGCC               GGTGGCGGGCGGGCA  58 93
   Bphy_1409 NONE
   Bphy_1408 1587011 .. 1587030 - -10.7  -5.08178   AGACATAGACAAAAA            CGGAGCC TCGCAG GGCTCCG             TTCCATACGGCCGCA 100 78
   Bphy_1407 1584840 .. 1584865 -  -4.7  -4.38114   AAAACCCACAAGAAA         CAGACCGGCGAC TGC GTCGC-AGCCTA         AAACTAAAACCTCAG  68 37
   Bphy_1405 1581066 .. 1581082 -  -9.3  -3.32769   TTTCGAAATGACGAA              GGCCGCG CTG CGCGGTC              GCTCCGCTCGAGGTT  63 112
   Bphy_1404 1580792 .. 1580816 -  -3.4  -3.16971   GCACCACACACTGAA         CG-GGTCCGGC GCCT GCCTGGCCGCG          CTGTCAGTTGCGTGC  45 29
   Bphy_1403 1578239 .. 1578274 - -22.1  -4.07568   GCTTCCCGGGCAAAA    GCAAAACGCCACGGA TTTCAG TCCGTGGCGTTTTGC     TTTATGTGCCTGCGT 100 228
   Bphy_1401 1575766 .. 1575783 - -14.1  -3.35438   CAGTAGATGCGACAA             CGGGCGC TCGC GCGCCCG              CTTCGGGAACTGCTC  81 74
   Bphy_1396 1568214 .. 1568247 -  -3.8  -4.14392   GGCGAATGCGCAAAA    CCTG-CC-TGAAGCCC ACGC GGGCGACAAGGTCAGG     CGTCTCGTGAACAAA  62 74
   Bphy_1395 1566905 .. 1566939 -  -5.5  -3.34431   AAAAGATGCGCAGAA    CGAGCGAAGCCGGACG TGCA CGCCCGGTGACGC-CG     CGCTATGACGTGACG  53 319
        cysS NONE
   Bphy_1389 1561361 .. 1561406 -    -5  -3.78775   GCGCCCATGACGAAA CCGTCTCGA-ATCTATCGATTT TAAC AAATCAATAGACGTCGAGG-GG TGCCGCTCATTCGTT  57 76
   Bphy_1388 1560277 .. 1560289 -  -7.7  -2.89564   GTGTCAGCGGAGAGA                GTCAC GAG GTGAC                GGCGCCCAGGCGCCT  55 63
   Bphy_1387 1558706 .. 1558734 -  -5.2  -3.78042   GCGACGACAAAAAAG        CGGGTCGGGCAA ACAAG TTACACTACCCG        ATCAGCAATAAAAAG  57 154
   Bphy_1386 1556801 .. 1556826 - -16.9  -5.26119   CGCGCAAAAACAAAA         CCCCGCAGAGC CGCA GCTCTACGGGG          TTCCACCGCCATTTC 100 339
   Bphy_1385 1556024 .. 1556036 - -10.5  -5.06414   TGCGCGCAACAAAAA                CCGCC CCG GGCGG                TTTTTTGCTTTGCGC 100 52
   Bphy_1383 1553092 .. 1553103 -  -4.4  -3.04398   CGTCGCTGGTAAAAG                CAAC GTGC GTTG                 TTCAAAAGTGCATGA  46 59
   Bphy_1382 NONE
   Bphy_1381 NONE
   Bphy_1380 NONE
   Bphy_1379 1548408 .. 1548431 - -18.2   -4.2231   AAGCAGTACGTAAAA          GGCCCGCTTC GAAC GAAGCGGGCC           TTTTGCTTGAAACGG 100 58
        gltX 1545383 .. 1545400 -  -7.7  -3.28712   TCTTTTTTTCTACAA             CTTCCAG CTAA CCGGAAG              AACTTCACTCTGCTC  59 262
   Bphy_1376 1544087 .. 1544105 -  -5.2  -3.25202   GAGGGGGAAACAAAG             TGCAATCG ATG CGCCTGCA             ACGCTCTCAGACGCG  48 32
   Bphy_1374 NONE
   Bphy_1373 1541769 .. 1541796 -  -6.8  -3.37464   GCAGGAACTCGACAA        GGTGAAGGCCGC GATC GCGGGCGACACC         GCGCCGTACGTTCGC  55 279
   Bphy_1370 1538237 .. 1538281 - -10.1  -2.53581   GAGACTGCGAACCTA CGC-GCGCAAGCGCCTGCG-CCG CAG CGGTCGCA-ACGC-CGCGCAGCG GGCTGTCAGAACGAT  60 125
   Bphy_1369 1537670 .. 1537695 - -17.6  -4.07568   CTTCGTTTCGGAAAA         CGCGCGCCAG TGATCG CTGGCGCGCG          GTTTGTTTTGGGGCT 100 39
   Bphy_1365 NONE
   Bphy_1364 NONE
   Bphy_1363 NONE
   Bphy_1362 1529710 .. 1529727 -  -9.8  -3.72576   GCGGTGCTGATGAAA             GGCGGC CATCTC GCCGCC              ACCGACAGCCCCGAC  71 309
         alr NONE
   Bphy_1358 1524911 .. 1524960 -  -8.7  -3.02829   GAGACTGTTTCAAGA CGTCTTCCTTTCCGCTCGTGACAT TGC ATCTCACGAG-GATAGGGAAAACG AAAGTCCCTTGGGTT  60 113
   Bphy_1357 1524179 .. 1524210 -  -7.3  -3.65522   CACGTACGCGAACAA      CGTCGTTGCGCAGG TGGCG CTCGC-CAACGACG      GCACAGCGCCTGTCG  63 460
   Bphy_1354 1520485 .. 1520533 - -12.2  -3.14132   CTCGTGCCCGATGAA GC-CGTGTTCGCCGCGCTGCGGC TCGC GGCGCTGCGCGGCGTCGACGTGC GCATTCTGATTCCGA  69 400
   Bphy_1347 1513051 .. 1513096 - -12.5  -3.33261   CGGCAAGCGGCACAA CGTAGCGCGAGCCCGCTGCG ATTCCGG CGCCGCGG-CGCGCCCTACG CTGCACCGCTGGCCA  76 52
   Bphy_1346 1509390 .. 1509432 - -13.3  -3.14211   ATTCTGTTTCAGCAA CACCTGCACGCGGCCCGGC ATGAG GCCGGACGACGCACGGGTG GACGTTTAAACGATA  78 31
   Bphy_1345 1507944 .. 1507974 -  -8.2  -4.35926   AGCCCAAACTGAAAA       CCACCTGAAGCAAC GAC GGTGCATCAGGCAG       TTTATGGGTGGAAGC  77 73
   Bphy_1343 NONE
   Bphy_1342 1504174 .. 1504189 - -11.8  -5.30616   TTATGCAAACAAAAA              GCCCGC ATCC GCGGGC               TTTTCTTATATCGAA 100 50
        rpsB 1497627 .. 1497647 -    -9  -5.47218   CGCGACTTAAAAAAA           GGGGGC-CT ATAG AGAGCCCCC            TTTTTTGCCGGACAC 100 49
         tsf 1496450 .. 1496484 - -10.7  -3.54459   GCAAGCGCCGCCAAA     TTGACGCGCGTCGAC GATCG GTCGAAGCGTGCCAA     CCGGGCGACCGCAAC  70 137
        pyrH 1495574 .. 1495612 -  -3.7  -3.09718   GAACCTTCAAAACGA  TGCGAGCCGCCAGC-GCGC GAG GCGCAGCCTG-AGCCCGCG  TTCAAGCCCACAGAA  43 52
         frr 1494947 .. 1495001 -  -2.2   -2.9592   AGAGAAAGGAACAAT GATCAGTGAAAGTCTGCATGTCTGG TTTGCG CCAGACCGTCAAACCGTCA-TGATC TCGCCTTCCTTGGTC  40 10
   Bphy_1334 NONE
   Bphy_1333 1493328 .. 1493338 -  -2.4  -3.27475   TGGGCTACGACAATA                 CGAG CAT CGCG                 AGCGGCAACACCGGC  44 4
   Bphy_1332 NONE
   Bphy_1331 NONE
   Bphy_1330 NONE
   Bphy_1329 1487669 .. 1487688 -  -7.1  -3.07816   TGTTCAGTTACCCAA            GCGCCGCG GATGT CGCG-CGC            CGGAGGTGTTGCACC  52 74
        lpxD NONE
        fabZ NONE
   Bphy_1326 1484963 .. 1484987 -  -4.3  -3.06183   CGGACTGGTAGGCAA          CGGCATC GGTTAGCGGAT GATGCCG          CGCTGCGACTGCTCG  46 10
        lpxB NONE
        rnhB 1483021 .. 1483033 - -10.5  -5.08255   ACGGTGAAAAGAAAA                GCGCC GGA GGCGC                TTGATGGGTTGGTGC 100 45
   Bphy_1323 1481706 .. 1481730 -  -3.5  -3.71998   CACCGAGGAATACAA          GAACCGGATCG AGG CGATCAACTTC          TCGCTCGCTCACGAC  54 480
   Bphy_1321 1478445 .. 1478465 -   -14  -4.61873   CTCCACAAAGCAAAA            CACCCCGG AGCTA CCGGGGTG            TTTATAGCATGAAGC 100 103
   Bphy_1320 1477958 .. 1477969 -  -5.8  -2.50816   TCTCGACGCATGAAT                CCGT TCAG ACGG                 CTCAGGCCCTCGCCC  45 27
   Bphy_1319 1476555 .. 1476567 - -10.5  -3.17075   GGGCTGGGAAGTCAA                GGCGC TGC GCGCC                GGGCGCGGGCAGATC  63 406
   Bphy_1317 NONE
   Bphy_1316 1475505 .. 1475529 -   -15  -4.71426   GCGGCACGAAGAAAA          GGCGCACCGC GTGAT ACGGTGCGCC          TTTCGTCGTTTGGCA 100 61
   Bphy_1314 NONE
   Bphy_1313 1471726 .. 1471756 -  -9.7  -3.72588   GAACGGATAGGGAAA      GCCGCGCGTGTCGC ATGT GCGACAGG-ACGGC       GTTGTCATTAAAACG  71 170
        guaA 1470073 .. 1470088 - -11.8  -4.86621   ACCGGCAATGAAAAA              GGGCGC CGCA GCGCCC               TCTTTTCAACCCGGC 100 42
   Bphy_1306 NONE
   Bphy_1305 NONE
        ldcA 1463044 .. 1463068 -  -6.4   -4.1964   TTTAATACTTGAAAA          TTAAGGCGAG CCGGC CTCGCCTCTA          TGCATCGCGACATGA  71 51
   Bphy_1303 NONE
   Bphy_1302 NONE
   Bphy_1301 1459234 .. 1459261 -  -9.1   -4.1899   CCAGTGTAGCGAAAA        CGCCCGGATGC GCCCAT ACACCCGGGCA         GATAGTGCATGTCAG  79 37
   Bphy_1300 NONE
   Bphy_1299 NONE
   Bphy_1298 NONE
   Bphy_1297 1455982 .. 1456009 - -12.8  -6.12458   CAAAAAAACAAAAAA        CCCATCGCAGAT CTCC ATCCGCAATGGG         CTTCCGAGCATCAAG 100 64
   Bphy_1293 1451558 .. 1451577 -  -5.7   -3.1355   TTGATCGACAGGTAA            CGCACAG GCACTA CTGTGCA             GGCGGCGGTCTCGAA  50 68
   Bphy_1291 NONE
   Bphy_1290 NONE
   Bphy_1289 NONE
   Bphy_1288 1445308 .. 1445336 - -19.7  -5.14965   ACGCGCATGAAAAAA        GCTGCATCCGATG TAA CACCGGATGCAGC        TTCTGACGTGCCCAC 100 120
   Bphy_1286 1443842 .. 1443854 -  -3.3  -2.94099   TGTTGGCAGTAGACA                GCACG GCG CGTCC                CTTTGAATGATAGAT  42 112
   Bphy_1285 1442208 .. 1442227 - -13.6  -5.01042   AACCCAAATGAAAAA            CCCGCTTC TTAC GAAGCGGG             TTTGAAGGATTTGCA 100 51
   Bphy_1284 1440551 .. 1440577 -  -7.9  -4.97158   TGAGATCAAACAAAA         CCCGCGTGTCG GTTAT CGACACGCGCT         TTCATTGCGTTTCAT  93 97
   Bphy_1283 NONE
   Bphy_1282 1438473 .. 1438496 - -10.3  -4.86621   ATGTGCAATGAAAAA          CGCCGGCTCT TGACG AG-GCCGGCG          TTTTTCATTGCACAT 100 60
   Bphy_1279 1435076 .. 1435098 - -10.5  -4.29508   ATGTAGACGAACAAA           GCCCCCGGC TGGAT ACCGAGGGC           TTCATGATGATGCTT  87 70
   Bphy_1278 NONE
   Bphy_1277 NONE
   Bphy_1276 1432075 .. 1432098 - -11.6  -5.14965   ATCTTGATGAAAAAA          GCCGGCGTCC TGGC GGGCGCCAGC           CATCTGCATTGAATT 100 58
   Bphy_1274 1429740 .. 1429793 -  -9.5  -2.53164   GCACGCACGATGAAT CTGCGTGCCGACGTGCA-GCGCGCAT TCA ATGAGCGCCTGCAGCTCGACATGCGG CAAACGGTTTGGGCC  55 469
   Bphy_1272 1427551 .. 1427568 -  -5.5  -3.89614   TTGAACGGCGACAAA             CGCGAAG GGCT CCTCACG              GAGCCCTTTTTCATG  62 67
   Bphy_1268 1421094 .. 1421121 - -19.2    -5.626   GACTGCACAAAAAAA        CGCGCCCGTGAT GTCC ACCACGGGCGCG         TGTTTGCCGGCGTCG 100 54
   Bphy_1264 1413706 .. 1413760 -  -6.3  -3.16191   GCAGATTGGCACGAA CGTTCAAGACGGCGGCCTGCGCGCGT CACT ACACTCGCCGG-CACTGACTTCAACG AAAGGAAACGCCATG  50 437
   Bphy_1255 1405406 .. 1405417 -  -7.2  -5.22312   ACGGATATCAAAAAA                GCGC GACT GCGC                 TTGAAGCAAATACTG  93 77
   Bphy_1254 NONE
   Bphy_1253 NONE
   Bphy_1252 NONE
   Bphy_1251 NONE
   Bphy_1250 1400118 .. 1400130 -  -3.4  -3.15663   ATGCAGGTCGATCAA                CGTT CGCTC AACG                CATCGTCGATGCCCG  45 20
   Bphy_1249 NONE
   Bphy_1248 1398433 .. 1398463 -  -6.9  -4.07618   TCGTCAAGAACGAAA      CCGTCGCCGT--GCA ATT TGCCGAAGGCGACGG      CGAACTGATGAGCCT  68 391
   Bphy_1245 1396530 .. 1396549 -  -4.9  -3.84719   AGTTTGAAAGTGAAA            GCCCGCC CGATGT GACGAGC             CGATGACGCGGATTA  57 121
   Bphy_1244 1395953 .. 1395978 -  -9.7  -3.53444   CGATTTTCGTCTAAA         CGACGTATCGC TCCG ACGATTCGTCG          AGACGGCACAAAACC  66 83
   Bphy_1243 1394599 .. 1394638 -  -9.3  -3.03338   ACAACGCCGCCAACA  CGAAACGGGCGTC-GACC AGGAA GGCAGGAAGCCCGTTTCG  CTATTGACGCACACC  60 101
   Bphy_1241 1393273 .. 1393307 - -11.3  -3.55444   CCGGCAGGTGTGAAA    GCGCACGC-GGCGACG AGTG CGGCACCCGCGAGCGC     TGCTGCAAAGACGGC  74 221
   Bphy_1240 1392811 .. 1392825 - -12.8  -2.78996   GACCGTCATGCAAAG               CCGCGC AGC GCGCGG               TGTCAAGATGTTACG  69 106
   Bphy_1239 1391717 .. 1391737 -  -6.7  -2.80816   CTCGCACGGAGGAGA            CGTCCACGC GGT GCGAGCACG            CGCTACAGCCAGTTC  50 28
   Bphy_1237 1389338 .. 1389349 -  -7.2  -3.72576   CCGCCCGTCACGAAA                CGCC GTCC GGCG                 GCCGCGCAAGTCATG  63 245
   Bphy_1236 NONE
   Bphy_1235 NONE
   Bphy_1234 1385445 .. 1385461 -  -5.1  -2.87132   TCTGTTGGGCACAGA              CAGGCAT GCG ATACCCG              CTTGCGCCCGATGAG  45 49
   Bphy_1233 1384432 .. 1384465 -  -8.8   -4.2687   TGTAAAAACTACAAA     CTCGACGCGCGAGCG GCCAT CGCCCGCGCG-CAAC     AGATGGGAGGACGGA  79 41
   Bphy_1232 1382327 .. 1382353 -  -7.3  -5.18371   GCTCAGAAAACAAAA        GACGGGTG-CCT GGCG AGGACAGCCGTC         CGGTGATGCTGCGTC  93 113
   Bphy_1231 1381093 .. 1381123 -  -5.3  -2.54896   GTCGTACGGAATCGA      CGCTGCGCTCAGGC GTCG GCATGCACGC-GCG       TTCATGTCTGTATGA  46 234
   Bphy_1229 1378485 .. 1378524 - -14.4  -3.14132   TGCGCCTCGCAGGAA  GCCCGCGCAAATCGGGT GAAGCGA ACCCG-TTTGCGCGGGG  GTCGCGCTGCGCGAG  82 41
   Bphy_1228 NONE
   Bphy_1227 1375331 .. 1375352 - -15.9  -5.38054   CTGCACAAACAAAAA           GAGCCAGCC CGAA GGCTGGCTC            TGGTGATGGATCGTC 100 67
   Bphy_1226 1373706 .. 1373726 - -12.6  -5.44119   GTCAGGCGAAAAAAA            GCGGCTCT ATGGA AGAGCCGC            TTCCGGTACTTCATG 100 63
   Bphy_1223 1371628 .. 1371664 -  -5.7  -3.62096   CCCGACGATGGCAAA    GGCATCGCGCAACCGTA CGG CACCGACGCGCAATGCG    GCGCGTCTCAGGGCA  57 280
   Bphy_1220 1368726 .. 1368737 -  -3.6  -3.64487   CGACAGCGGCAACAA                CCGC CTCG GCGA                 TGAACTGTCGTGCGT  51 116
   Bphy_1219 1368039 .. 1368055 -  -3.6  -3.33696   CGGTTGTCGAAGGAA              CGGGAC TTCAT GTCGCG              GCGACGGACGAAGCC  47 224
   Bphy_1217 1367629 .. 1367670 -    -2  -3.07816   GTGTCAGTGAGGGAA TGGCGCGCGCTGC-ATCTG GCTGG CGGTTCGTCGCGCGCGCCG CCGCGATGCGTTACC  41 36
   Bphy_1216 1366309 .. 1366338 - -13.6  -3.08312   AAGGCAGTGACGCAA       TGAGCGGCACGC CGACGC GCTTGCCGCTCA        AAGCTGCGGATCGAG  76 23
   Bphy_1209 1360315 .. 1360339 - -10.8  -2.53263   TCCATGCGTAAGTCA         GTCGCGCGCAT GCAG AT-CGCGCGAC          GAAGCGAAAACGTAA  60 72
   Bphy_1208 1359569 .. 1359582 -  -2.3  -3.36273   TGGCGCGAACACGAA               TGGCG CGAA CGTCA                ACGCGAACGTTGGGG  44 188
   Bphy_1200 1350905 .. 1350925 - -11.1   -5.1244   CCAGGAATAGAAAAA            GCGCGCGAA ACA TCCGCACGC            TTTCTTCATAAGCTC 100 90
   Bphy_1198 1342857 .. 1342901 - -13.4  -4.42238   TGACCCGAATTAAAA CGCGTCCTCGCGCGGCGTGCC TCGC GGTGCGCCGCGCC-GTACGCG TATCATGCCGACTCA 100 28
   Bphy_1195 1339934 .. 1339960 -  -4.4  -4.11216   GGTGGACTGTCAAAA         GTGCTTCATG CGCGAAT CACGAAGCTC         ACTGGACTTACCTCA  61 505
   Bphy_1193 1338782 .. 1338793 -  -2.2  -3.64822   ATCGCCGCAGGCAAA                GCGGC CCT GCC-C                AAGTCTTACGCGACG  49 31
   Bphy_1192 1338263 .. 1338296 -  -8.1  -2.64155   CCGTGGTGAAATTCA     GTGGTCATGGCATGC TCCT GTATGCGATGACCTC      ATTTATACGCGAGCG  52 28
   Bphy_1191 NONE
   Bphy_1190 NONE
   Bphy_1189 1335430 .. 1335452 -  -3.2  -3.20723   GCTGGATGAATTCAA           CGAGCTGGGC TTC GTCGCGCTCG           CGCGCAGCCGCGGGC  45 338
   Bphy_1187 NONE
   Bphy_1186 1332830 .. 1332853 - -10.3  -3.05816   CGAGGCGCGATCGAA          CGCGTCTCGC TTCGC GCGAG-CGCG          CTATCGGGCTGCCAG  64 469
   Bphy_1182 1329441 .. 1329461 -  -5.3  -2.74192   CATTGCTGAACACGA            CGCATCGAT GGT AGCGAGGCG            AATCTGAAGAGAATA  46 96
   Bphy_1181 1328919 .. 1328944 -  -5.4  -3.76413   GCTGAAAACCTGAAA         GCTGC-CCGTC CCGTC GACGTCGCAGC         CACATAGACACAAGC  60 52
   Bphy_1180 NONE
   Bphy_1179 NONE
   Bphy_1178 NONE
   Bphy_1177 1323970 .. 1323997 - -24.2  -5.54192   AGCAATCGAAAAAAA        CCCCGGTCGCCG GGTG CGGCGACCGGGG         GAAGCTCTCTCGCGC 100 293
   Bphy_1176 1322545 .. 1322559 -  -8.6  -3.76224   GCGGGACTGATCAAA               CACTTC GTC GAAGTG               AAGGCGCTCACAAGC  67 492
   Bphy_1174 NONE
   Bphy_1173 NONE
   Bphy_1172 NONE
   Bphy_1171 NONE
   Bphy_1170 1314233 .. 1314243 -  -8.2  -3.75897   AAGCTTGAAGGGAAA                 CCCG CGA CGGG                 GGAGCCATATCACGC  67 458
   Bphy_1169 NONE
   Bphy_1168 NONE
   Bphy_1167 1308089 .. 1308105 -  -5.7  -3.34894   AAGTTCGCGGAAACA              GCGCGCG TTT CGCAAGC              CATTCGATGCGCAAA  52 126
   Bphy_1166 1306406 .. 1306423 -  -6.9  -4.09685   GCTCACCTGGCAAAA             GGCGAAG CCTG CGTCGCC              CGCGATGCGCGCGTT  68 138
   Bphy_1164 1304562 .. 1304572 -  -8.2  -3.03771   GCACAGTGCGCAACA                 CGCG TAA CGCG                 ATCTGCGTCGGGCTA  56 59
   Bphy_1163 1304116 .. 1304166 -  -4.5  -2.88023   CGATTACGATGAAAT CCGGACGGGCCGCGACG-CGACGCG TGT CAC-TCATCGACGCGCACCGCGCGG CCCACAATGTGGCAT  45 44
   Bphy_1162 1302653 .. 1302673 - -11.1   -3.6284   AACGATCAGTTGAAA            GTCGCGCAG ATG CTGCTCGAC            GACGGGCTTGCCGAC  74 342
   Bphy_1158 1297806 .. 1297837 -  -8.8  -4.08317   GAAGCTGAAATGAAA      TG-GGGCGCATCC CTCTCGC AGATGCGCCCTCA      CCGGCTAATTGCAGC  76 257
   Bphy_1157 1296399 .. 1296428 -   -15  -4.75776   AATCCAATGCAAAAA       CGCGCGCTCCGC CTGGAC ACGGAACGCGCG        TTCGCCGCTGCGGCG 100 100
        glnH NONE
        glnP NONE
        glnQ NONE
   Bphy_1153 NONE
   Bphy_1152 1291890 .. 1291906 - -13.7  -3.05844   TCGCGCATTCGAAGA              GCCGCTC GAT GAGCGGC              CCGCTCAGTCCGTCT  76 30
   Bphy_1151 1291301 .. 1291323 -   -12  -4.45544   GCGCACCAACGAAAA           GGCCCGGA ACAGACG TCCGGGCC           TTGCAGGCTTTCAGG  95 64
   Bphy_1150 NONE
   Bphy_1149 NONE
   Bphy_1148 NONE
   Bphy_1147 1287169 .. 1287185 -  -2.9  -3.68222   GCTGAAGCTGAAGAA              CTAGCGA GAA TCGCCAC              CCACTCTCACCGCTA  51 450
   Bphy_1142 1282667 .. 1282677 -  -6.8  -3.72788   GTCGACAACACAGAA                 TCGG ATC CCGA                 GAGCGGCGTGTTCGC  62 83
   Bphy_1136 1278197 .. 1278211 -  -4.2  -3.88498   GTGCCACACACCAAA               TTGCCG CTT CGGAAA               GAGCGCGGGATGAAT  59 108
   Bphy_1132 NONE
   Bphy_1131 1274493 .. 1274503 -  -8.2  -3.17723   TGACGGGCAAGCGAA                 CGGC CAT GCCG                 CTCTGTTTTCCGGCG  57 240
   Bphy_1129 NONE
   Bphy_1128 NONE
   Bphy_1127 NONE
   Bphy_1126 NONE
   Bphy_1125 NONE
   Bphy_1124 NONE
   Bphy_1123 NONE
   Bphy_1122 NONE
   Bphy_1121 1266922 .. 1266939 -  -2.5  -3.85698   CGTGGCTTTGATAAA             CGTCCGC GTTC GCGCCCG              CGCGGCGTCGCAAGC  54 112
   Bphy_1120 1266392 .. 1266409 -  -8.3  -2.64616   CCTTGACGCAGATCA             GCCGCCG GCCG CTGCGGC              TTGCCGCTGCACGCG  52 45
   Bphy_1119 1264903 .. 1264921 -    -6  -3.74077   CGCCATACAGTCAAA             CAGGAC TGCACGG GTCCTG             AATTGAACAGGAGAC  60 514
   Bphy_1117 NONE
   Bphy_1116 1263488 .. 1263498 -  -8.2  -3.15354   CACTGCAACTCAACA                 CGGC CGA GCCG                 CTGACATCCGACGAA  57 168
   Bphy_1112 1256571 .. 1256583 -  -7.7  -2.73681   GATTCATGTCAATCA                CATCG GTG CGATG                CAAGGGTGAAACGTC  53 106
   Bphy_1111 1255743 .. 1255774 -  -9.3  -3.03635   GAAAGCCGGCTAACA      GCGTGTCCGCGGC CCCATC GCCGCAGCAACGC       GATTTCATGCGAGAC  60 45
   Bphy_1110 1255067 .. 1255097 - -15.5  -4.09963   CGCGAACAAGAACAA       GGAAACGGGCCTG GCATT CAGGCCGGTTTCC       CCGTTTTTCCGCTCT 100 164
   Bphy_1108 1253366 .. 1253379 -  -3.7  -3.27475   TCGCGGATGAGAAGA               GGCGC GGCG GCGAC                AGGCGGTATGTCATT  47 36
   Bphy_1107 1253016 .. 1253040 - -15.7  -3.48593   GATCTCGCCACAGAA          CCATGCCTGCG TTA CGCGGGCATGG          ACTCGAACACCTGAC  93 73
   Bphy_1106 1250875 .. 1250906 -  -3.6  -3.53091   ACGCGTGCGGGCAAA      CGTCGAGTCGATCGC GTC GCTCTCGGCTC-ACG      CCGACTACCGCGAAC  49 251
   Bphy_1104 NONE
   Bphy_1103 1246303 .. 1246313 -  -2.4  -3.65046   TTTCTAGCCGAAGAA                 GGCC GAT GGCG                 ATTGCCGATGCGCGA  49 141
   Bphy_1101 NONE
   Bphy_1100 NONE
   Bphy_1099 NONE
   Bphy_1098 1240158 .. 1240173 -  -3.2  -3.53012   TTCCCTTTGTGGAAA              GCCG GGCAAGTT CGGC               TCTCATTGCGACGAG  49 225
   Bphy_1094 NONE
   Bphy_1093 1234587 .. 1234614 -  -6.9  -3.63922   ACCGGCCGGAAAACA        CCGGCCG-GCCC TACGT GGGCACAGCGGG        AAGTCATTCACAGCA  60 33
   Bphy_1092 1232858 .. 1232909 -  -2.2  -3.73995   GTGGGGAGAAAAAAG GACCCGCCAGGCG-TCGCCTT CGCGACCGTTC AAGCCGCGCGTCTGGCGGGTG TCAATATCAGCAGCA  52 159
   Bphy_1091 1231232 .. 1231249 -  -5.5  -3.34895   GCGATTCGGAAGCAA             CGCGGAT CCAT ATCCGCC              GCGAAGACAAGCCAT  53 438
   Bphy_1087 1226010 .. 1226022 -  -3.3  -2.91276   CCGGCCGCGACAAAT                TCGAC CCG GGCGA                TGTGATCGCGGCATT  42 269
   Bphy_1086 NONE
   Bphy_1085 1223131 .. 1223151 -  -2.4  -4.06384   CCGCAACATCACAAA            CCTGGCCG GAGGT CTGCAAGG            GACAGGGGAACGGAC  57 356
   Bphy_1079 NONE
   Bphy_1078 1214390 .. 1214434 - -14.9  -2.70525   CTGCCTGAAAGCAAT GCCAGCGGCGGCGACGGCGC CTCCAT GCGCCGTCGC-GCTGCGGGT GCGCGGGCACGCGCG  77 50
   Bphy_1075 1211575 .. 1211602 -   -17  -4.90869   ACCAGGAAGGAAAAA        GGCCGGTGCGAT CTGT ATCGCGCCGGCC         TTTCTTTTTGCCGCA 100 63
   Bphy_1071 NONE
   Bphy_1070 NONE
   Bphy_1069 1201851 .. 1201867 -    -5  -4.65263   ATCGGGTAAAACAAA              GGGCGC TTTAC GTGCCC              CTTGCTCGTCGACGG  73 44
   Bphy_1056 1184669 .. 1184696 - -19.2  -3.40299   CGACGACATGGAGAA        GCGGTGACGGGC AGCA ACCCGTCACCGC         GCGATGCGTTATTGA  95 34
   Bphy_1053 1181644 .. 1181666 - -18.4  -5.43866   GAAGCTCGAAAAAAA           GCGGCGCCCG TGA CGGACGCCGC           TTGCCTGTCTCGCTG 100 89
   Bphy_1052 1180924 .. 1180934 -  -8.2  -3.53343   AAGTGTTGCGGGAAA                 GCCG CAG CGGC                 GTTGCTATGCCAGCG  62 66
   Bphy_1051 1179795 .. 1179828 - -15.3   -4.3739   CATGCGCGCATAAAA     GAGGGCGACGCGATC CGAT GATTGCGTCGCCCTT      CGTCATCTATGCCGA 100 188
   Bphy_1041 1170369 .. 1170400 - -16.6  -2.74563   TGGATACGGGAACCA      CG-CGTCGCGCCTGC GTC GGAGGCGCGACGTCG      AAGGCGACGTGAACG  84 50
   Bphy_1040 1169183 .. 1169241 -  -5.8  -3.13403   GTTCTTCGAGCAATA CGTGCGCGACGCCGA-CGAC-CGCCACG ACTGG CGCTTCGCGCCGCTCGACGGCACGCGCG GCGCACCGGATTTTC  49 288
   Bphy_1035 1164995 .. 1165007 -  -4.8  -2.77899   CGGCGTCATCAAGGA                CGTG CTGCT CACG                CGCATTCCGTCCGTG  44 263
   Bphy_1033 1163616 .. 1163650 - -13.4  -3.01712   GCCCGGCGCCGAACA     CGGGCATCGACCGGGG CCG CCGCAGCCGCCGCCCG     GTCAGCGCGGCGAGC  71 300
   Bphy_1031 1162680 .. 1162703 - -13.8  -3.73775   CGCACGTCGAGGAAA          GCCCGCGTAC GAAA GTGCGCGGGC           TTTTTCTTGCGCGTG  91 53
   Bphy_1026 1155066 .. 1155083 -  -6.9  -3.57144   GCGCGCAGCCCCAAA             CGCCGCG GACT CACGACG              AGCAGCTCACTTCGA  60 18
   Bphy_1025 NONE
   Bphy_1024 NONE
   Bphy_1023 1153163 .. 1153178 - -11.8  -6.04324   GCAAAAAATAAAAAA              GCCGCC CAAA GGCGGC               TTCCTTCAAACCAGA 100 50
   Bphy_1021 1147006 .. 1147033 - -14.2  -3.10715   GCCAGTACCACCTAA        GGCATAGGACGA ATGA CCGTCCCATGCC         GGATCTGCGTACTCA  76 38
   Bphy_1020 1145312 .. 1145345 - -10.9    -3.524   CACGCACCCAGATAA     CGGGACGCCCGCCGCG GTG CGCGCCGGACGTCA-G     TCACGCAACGGATAG  74 22
         pgi 1143393 .. 1143415 - -19.2  -5.44119   TGCAGGCGAAAAAAA           CGGGCCTTCG TGA CGAAGGCCCG           TTTGGTTTCGAGCGC 100 63
   Bphy_1017 1141822 .. 1141838 -  -3.6  -3.37283   GAAATCGCTCAAATA              GAGCCG GTTGT CGGATC              ATGCAATCACCTATC  47 124
   Bphy_1016 1141389 .. 1141407 -   -16  -4.27117   CCGCCACAACAGAAA             GCCCCGCA AGT TGCGGGGC             TTTTGTTTCGCTGCC 100 69
   Bphy_1009 NONE
   Bphy_1008 1129927 .. 1129945 -  -9.5   -3.0894   CAACGAGGGAGTCAA             CGGCGCC GCGCA AGCGCCG             ACACTGGAGCAACCC  60 59
   Bphy_1007 1128861 .. 1128878 -  -9.8  -4.52857   ACGGCGCACACAAAA             CCCCGC ACGAAG GCGGGG              TTTTCATGCATCGAA  89 484
   Bphy_1006 1127120 .. 1127130 -  -2.4  -2.75039   CACACATCGGAACCA                 GCTG ACC CGGC                 ATGCGGCATTGCTCG  38 398
        ompR NONE
   Bphy_1002 1123469 .. 1123482 -  -2.4  -3.14602   TGCAGTTTATGAATA               TTCG TCTGCG CGAA                ATGGGAGAAAAAAAT  43 81
   Bphy_1001 1122693 .. 1122720 - -11.2  -5.24129   GTTGCCGATAAAAAA        GCCCGCTTGCCT TTCG AGCCTAGCGGGC         TTTCGACCACACATT 100 42
   Bphy_1000 1122093 .. 1122113 - -14.7  -3.45054   CCGCAGAAGCGACAA            CGCCACGCA GAT CGCGTGGCG            TTTTTCACAAATCGA  90 49
   Bphy_0997 NONE
   Bphy_0996 1115755 .. 1115801 -  -6.6  -3.68351   GCTCGACCAGCCAAA GCT-CATCGCGGCAGACGCCCG TACGG CGGGGCTTTG-CGCGATGCAGC AACGGCACGTGAGCG  60 51
   Bphy_0995 NONE
   Bphy_0994 1113312 .. 1113327 -  -4.6  -3.53012   GTCGGTGTTTGCAAA              CGCCGC GCCC GCAGCA               ACCAGGCATATGACC  52 44
        mscL 1112629 .. 1112644 -  -4.7  -4.07568   CGCGTTGGGTGAAAA              CGACA AGGGCG TGTCG               ATCGGCAGGCCCTGG  61 89
   Bphy_0989 1107181 .. 1107211 - -22.6  -3.04894   AACCGCCCGCAAAAG       CGCCACGGCCGCGA ATC TCGCGGCCGTGGCC       GTGTCTCTGCGTGAA 100 64
   Bphy_0987 NONE
   Bphy_0986 1102601 .. 1102621 -  -8.1  -4.11394   ACTTCACGTGGAAAA            CCGTGCCGC CCG GCGGCCCCG            TCGCCGTCGACAGCG  71 420
   Bphy_0983 1099989 .. 1100007 -  -8.8  -3.54029   GGGGACGAACGACAA             GCGCCG TTGAGCG CGGCGC             GCGGGCATTCAGCGC  66 34
   Bphy_0978 1093219 .. 1093240 - -17.3  -4.01047   AAGCACGAACAACAA           GCCCGCTCG ATAT CGAGCGGGC            TTTTTCACCTGTGCC 100 58
   Bphy_0966 1078585 .. 1078618 - -24.1  -3.53091   AGCGGGCGCCGCAAA     GAACAACGCCACGGT CGGC ACCGTGGCGTTGTTC      TTTGATGAAGAGCGA 100 49
   Bphy_0964 1075669 .. 1075680 -  -2.2  -3.68222   CTTCAAGTGGAATAA                CTAC ATCA GCAG                 GTATCACTCGCGTCA  50 507
   Bphy_0958 1070148 .. 1070178 - -24.8  -4.15222   ATGGCGGGTAACAAA       CGGCGCGTGGCCTC GCT AAGGCCACGCGCCG       TTTTGCTTTTCGGGG 100 52
   Bphy_0950 1061256 .. 1061272 -  -7.2  -4.17657   TAGCACACGCCAAAA              CCAGCC TGCGC GGCCGG              TTCGTGTCGGCGCAT  71 174
         rho 1059826 .. 1059843 - -12.7  -5.45802   CGCGTAAAAGAAAAA             CGCCTGC GCAG GCAGGCG              TTTTGCGGATGAAAC 100 52
   Bphy_0948 1058703 .. 1058714 -  -3.6  -3.05384   TCTGGCGGTAGCCAA                CCCG GGAG CAGG                 AGATTCCGCAACCGC  43 155
       rpmE2 1058344 .. 1058361 - -12.7  -5.24129   TCCGCCGACAAAAAA             GGGCAGC TCGC GCTGCCC              TTTTTGCATCGTAAT 100 74
   Bphy_0946 NONE
   Bphy_0945 1054518 .. 1054544 -  -4.2  -3.53012   TGCGCGCCCGCGAAA         TCGCGACGATCG CTG CGTTGGCCGCGC         TTGGCAACGCGCAAC  51 495
   Bphy_0942 NONE
   Bphy_0941 1045281 .. 1045314 -  -7.3  -3.87149   CTCACCAAATTTAAA     GCTTCTGCGCGATCGC TGT GCGGTCGGGC-GCAGC     GGATCTCAGCGGGCG  65 31
   Bphy_0940 1044464 .. 1044482 - -13.8  -3.93288   CGGCAGGGAACGAAA             CGCCGCGC GAA GCGCGGCA             CCGATGATCGTGAGG  91 77
   Bphy_0939 1043876 .. 1043899 - -15.4  -4.70319   GGATGAAAAGCAAAA          GGGCAACGAA GCGA TTCGTTGCCC           TTTTTTTCACGCACG 100 85
   Bphy_0936 1039546 .. 1039574 - -12.7  -3.74747   CGAAGGCGGATTAAA        GTTATTCGTTGAA CGC TTCAACAAATAAC        GGCGGCTCTATTATC  85 104
   Bphy_0929 1032093 .. 1032115 -  -5.4  -3.04263   ACTTGATTCGCAAGA           CGCCCACGCC AAA AACGCGGGGG           CTGGGGCGGGCGAAC  49 68
   Bphy_0928 NONE
   Bphy_0927 1029539 .. 1029575 -    -5  -3.27525   TGCCTCTAAAGGCAA   GTGATGCGC-GCCGGGC CCGA ACTCAGCTGCGCGCCAC    GATGAACACACCGAC  49 11
   Bphy_0926 NONE
   Bphy_0925 1027073 .. 1027094 -  -3.5   -2.7555   GATACGCGAAGACGA           CGGCGCGCG GCTT CATGCGCCT            TGCCTCGGTTCGTCG  41 16
   Bphy_0924 NONE
   Bphy_0923 1025093 .. 1025104 -  -3.6  -2.53715   TTCAGGACGATCAAG                GCCA AGAG CGGC                 AGCCCTTATTGTTGT  40 31
   Bphy_0922 NONE
   Bphy_0921 1023334 .. 1023363 - -19.3  -5.26875   CGCGCAATTAAAAAA       GCCGC-CGCCCCGG CAA CCGGGGCAAGCGGC       TCGACTTCGGTCATC 100 175
   Bphy_0920 1021277 .. 1021303 - -15.8  -4.72272   GGCGCGCATGAAAAA         GCCGCTGCCGGC GTC ACCGGAAGCGGC         CTGGAACAGCGCAAA 100 49
   Bphy_0919 NONE
   Bphy_0918 1018969 .. 1018996 - -16.3  -2.88579   TTAAGCCGCGATACA        GCACGCCGCCG TCAGAT CAGCGGCGTGC         TGCCTCCATCCATCG  81 9
   Bphy_0908 NONE
   Bphy_0907 1009782 .. 1009804 -    -4  -3.53224   CATGCGCGCTGGAAA           CGCCGCATGC CGT GCATGACGCA           ACCAGACAATCAGCT  49 40
   Bphy_0906 1008404 .. 1008434 - -14.7  -3.15544   GGGCAGGGTGAGGAA       GGCGAAGCGCCGC AGGCG ACGGCGCTTCGCG       AGATGGACGAGGAAA  80 362
   Bphy_0903 1007215 .. 1007232 - -12.7  -4.59376   ATCAGCAAATGAAAA             GGGCAGC CGAA GCTGCCC              TGAAGCGTTGCGCAT 100 158
   Bphy_0900 1004512 .. 1004526 -  -4.2  -4.11216   GCGGCAGTTGCAAAA               CGCCAG ATT CTAACG               GTTTTGCAAAGCAGC  61 72
   Bphy_0899 1003595 .. 1003614 -   -10  -3.53012   CGCGGTGCCGGTAAA            CGCGGCACG GCG CGTGCC-CG            CCCGTCTCTGTGATG  70 145
   Bphy_0898 1002790 .. 1002805 - -10.4   -4.2679   GAATCGCGACGAAAA              GGTGCG TTGG CGCACC               AAGTTTAATGATTGC  84 436
   Bphy_0897 NONE
   Bphy_0896 1000574 .. 1000584 -  -8.2   -2.7556   AAGTTGACGCAAGGA                 GGGC GAT GCCC                 AGGTTCTGCAGCGCA  53 313
   Bphy_0894 1000306 .. 1000325 -   -15  -3.11291   TGGACAATCCGAATA            TGCGCCGC GAGC GCGGCGCA             TACGCATCAGTGTCT  80 32
   Bphy_0893  999598 ..  999623 - -11.8  -5.61881   GTGGAAAAACAAAAA         CCCGCGACAC GCAAAG GTGACGCGGG          TTTTTGTGTACGGCA 100 233
   Bphy_0892  998809 ..  998819 -  -5.4  -3.04398   TTCCTGGTCGAAAAT                 GTGA AAT TCAC                 TTCGACGCCAATGTA  49 170
   Bphy_0891  997625 ..  997643 -  -6.6  -4.59212   AAGTAAGCAAAGAAA             GCCGCTCA CAC CGAGCGTC             TTGACGTTTACCCGC  78 354
   Bphy_0889  993618 ..  993631 -  -4.5  -5.47218   TGCCAGCGAAAAAAA               CGACA CCAG CGTCG                AGGACAAAGATCAAT  91 36
   Bphy_0877  979932 ..  979952 - -12.5  -3.14564   GCAGCCGTTCATGAA            TGCGCTGCG CAT CGCCGCGCA            GGAAGCGGGCACGGA  69 361
   Bphy_0869 NONE
   Bphy_0868  968572 ..  968587 -    -6   -3.9122   GATGCTTCGAAACAA              GCCGCG GGCG CGCGTC               AGAGATCTGCCAGCG  62 24
   Bphy_0867  967604 ..  967627 - -15.2  -5.70761   AAAACAAAAGAAAAA          GGCCCGGGCG TTTC CGTCCGGGCC           TTCTGTTCTTCGAAT 100 166
   Bphy_0866 NONE
   Bphy_0865 NONE
   Bphy_0864  963961 ..  963971 -  -8.2  -2.52635   ATCGCCATCAGGAAT                 GGCG ATG CGCC                 GGATCTTTCGCGTGC  52 194
   Bphy_0860  958758 ..  958777 - -13.6  -5.14965   ACGCCGATTAAAAAA            GCCGCTTC GATC GAAGCGGC             TTTTTTGTTGCGGCC 100 69
   Bphy_0857 NONE
   Bphy_0856  954974 ..  954990 -  -3.6  -2.60392   CATCGCGGAAGGAAG              CGCAAG TTCGC CTGGCG              TTACTTCGCCGCCGC  40 26
   Bphy_0855  953632 ..  953648 -  -7.9  -2.79183   TCGAGGTGTATGACA              TGCTCGC CGC GCGCGCA              GCCGTGTTTATCATC  52 425
   Bphy_0853  952683 ..  952703 -  -3.2  -4.19238   TCGGCAAGTTCAAAA           CGGCCTGCC AGAT GAC-GGCCA            TTCCGATGCTGCTGT  60 300
   Bphy_0850  948573 ..  948598 -  -6.7  -2.61383   AGGCGGACTGAGAAT         CCGC-CGCCGGC CGC GCCGTCGTGCCG         CGCTTGCGTCGTCGG  49 56
   Bphy_0849  947655 ..  947682 - -12.8  -5.40072   CGGTCGCGAAAAAAA        GAAAAAGCGCCC CGAA GGGCGCTTTTTA         ATTCCAAAGACCCTG 100 86
   Bphy_0848 NONE
   Bphy_0847  945678 ..  945702 - -12.2  -4.49316   AGTAGCAATAAGAAA         GGACGGGTCTC GATC GAG-CCCGTCC          TTTTGTTTTGCCGGC 100 51
   Bphy_0824 NONE
   Bphy_0823  923400 ..  923452 - -10.7  -4.09685   CTGGACTGGGGAAAA GAGCGTCG-AGTTGGGTCTCGCCGA CGGCT TCGGCGACA-CGAACTACGTCGCTC GCGAAATCATCAAGG  79 225
   Bphy_0818  916330 ..  916348 -   -16  -5.08601   TGACGGCAATAAAAA             GCCCGCCT TGG AGGCGGGC             TTTTTCGGGGTGCCC 100 84
        moaA  915108 ..  915118 -  -3.2  -2.53715   GCGAGGACGACGAAC                 TCAG CCG CCGA                 TGTACGACATCTCGA  40 15
        mobA NONE
   Bphy_0815 NONE
   Bphy_0814 NONE
   Bphy_0813  912216 ..  912244 - -20.4  -4.16943   GGCCAGACGTGAAAA        GGGCGCGTGATC GCGAG GATCACGCGCCC        TTTTTCTGGCCGAAG 100 56
   Bphy_0807  905311 ..  905330 -  -9.3  -5.36441   TTGCTACATAAAAAA            GCCCGTT GTGGTT AACGGGC             CTTTGCAATTCTTGG 100 224
   Bphy_0806 NONE
   Bphy_0805 NONE
   Bphy_0804 NONE
   Bphy_0803  902284 ..  902295 -  -7.2  -2.71731   TCGACCGCGCAACCA                GCGC CGAG GCGC                 TGGCCCCGTGCCGTG  50 212
   Bphy_0802  901393 ..  901435 -  -8.5  -4.45771   AGGCCAAAATAGAAA TCGCGGCGAAGCTCAG AAAGATGTGGGA CTGAGCG-CGCCGCGA TCGGGCGGCGCCCGA  79 75
   Bphy_0798 NONE
   Bphy_0797  895800 ..  895816 -  -3.6  -3.73107   CGAGGAAACGTTAAA              GCGGGT CGGAT ACCGGC              ACAAGGCGCTACGCA  54 333
   Bphy_0796  893983 ..  894012 - -12.1  -2.71791   AGGCTTCCGGGAAAG       CGGCGCAGCACGCG CTC CTCG-ACTGCGCCG       TATGACTGTGCGGCT  69 39
        fumC  892330 ..  892360 - -13.2  -2.70932   GGTCGCCGTCAACGA       GAACGGCAGCCCCG TGC CCGTGCCGCCGTTC       GTGCCGCAGACCGAC  68 203
   Bphy_0790 NONE
   Bphy_0789  885573 ..  885597 - -12.8  -4.13767   TCCCCGATGTGAAAA          CGCCCACTGC CATTC GCGGTGGGCG          TTTTCATTCGCGGGC  89 57
   Bphy_0786  881819 ..  881838 -  -7.2  -3.39142   CGCACAGCCAATGAA            GCGAT-CGT TTT ACGTATCGC            TGACTTAATCGTTAT  56 109
   Bphy_0785  879946 ..  879978 -  -5.4  -3.53012   CTTCCCCCGGTGAAA      GTGGCAGCGCCTGA TTCGT TCTGATGCTGCCGC      CTTTAGTACGGCTTC  55 79
   Bphy_0784 NONE
   Bphy_0783  877487 ..  877504 -  -3.3  -2.96007   AACGAAAAGCAATCA             CCCGTGC AAGT GCACGCA              AACGCCCGTCATTCG  42 34
   Bphy_0782  876803 ..  876814 -  -2.2  -4.30416   AGTACGAAGGCAAAA                CGCGG ATG CCG-G                CAAAAAAAACCAAAA  63 84
   Bphy_0780 NONE
        mogA  873526 ..  873549 -  -7.4  -3.06183   TCGACGGTGACGGAA          GCGGACGCCAC AGA GCG-CATCCGC          GCTTTTCTCGGCCAG  55 350
   Bphy_0777 NONE
   Bphy_0776 NONE
   Bphy_0775  870340 ..  870356 -  -9.3  -2.73364   GCCCGATGCGAACGA              CGGCGTG TTG CTCGCCG              CGGGCAGCGGCGCGT  56 326
   Bphy_0768  864874 ..  864929 - -13.2  -2.83894   ATCACCATCACGACA CTCGACGCTGACATCGCGCGCACGC TCGAACC GCGTGCG-GCGACGCCCGCGCGGCG GCTCAGAACGATCCG  69 508
   Bphy_0765  862133 ..  862156 - -18.2  -3.67597   CGGTGCATCGAACAA          CAACGGCGCC CGAG GGCGCCGTTG           TTTCGTCAACAAAAT 100 53
   Bphy_0758  854101 ..  854149 -    -6  -4.82901   CGCGCTGCACAAAAA TG-ATGCTTGCGATCCAGCGGCTG CCG CAGCCGGTG-ATCGCTCGCGTGCA CGGCATTGCGACGGC  82 510
   Bphy_0755  851388 ..  851417 - -16.5   -4.0641   TCGCATCCAGATAAA       GACAAACGCCGGC ATCT GCCGGCGTTTTTC        ATGGTTGTGCGCGAG 100 46
   Bphy_0737  830801 ..  830818 - -14.1  -5.28176   CGCAGGCATAAAAAA             GCCCCGC CGAA GCGGGGC              TTGGGTACTGCGGTA 100 50
   Bphy_0736 NONE
   Bphy_0735  829092 ..  829111 -  -5.7  -3.44146   CCCCCGCAGAAGGAA            TGAGCCA TATATG TGGCCCA             AGAAGGCATTTTACA  55 101
   Bphy_0734  828015 ..  828034 - -13.6  -3.28924   GAGTTTGCCGGACAA            CGTCGACG ATGG CGTCGACG             GCTGGATCGTCGAGC  78 233
   Bphy_0732  826287 ..  826322 - -16.8  -3.00525   GCTCTGTAAATGATA    CGACGCACGCGGCGCC TCGC GGCATCGCGTGCGTAG     CCAGGCTGAGGCGCG  87 44
   Bphy_0729 NONE
   Bphy_0728 NONE
   Bphy_0727 NONE
   Bphy_0726  819302 ..  819329 - -17.8  -6.22802   GGCCATAAAAAAAAA        GCGTCCGCATCG TTGC CGATGCGAACGC         CAAGGTGCTGTTGCG 100 54
   Bphy_0722  813938 ..  813957 -   -15  -2.96274   CGCTGTAGAACCAGA            CCCCCGCA CGTG TGCGGGGG             TTTTCATTTCATCGG  79 70
   Bphy_0720  811619 ..  811631 -  -3.4  -2.94679   AGCAATCCTAAATTA                TCAG TGATC CTGA                CGAATGGCGCGGGCG  42 13
   Bphy_0719  810294 ..  810328 - -18.6  -3.91716   CGACGGCGCAAAGAA     TAGGGCTGAGTCCGCG ATT CGTGGACTCAGCCCTT     TGTGCCTTCAGGCAG 100 78
   Bphy_0715  804188 ..  804212 -  -4.1  -3.55622   TGGAAGTTCGGTAAA          GGGTGCGGCGA TTC TAGCCGAAGCC          CGCGGCGCATGCCGC  49 77
   Bphy_0714  803560 ..  803577 -    -7  -2.71712   TGGCGCTGGGGAAAG             GACGCT GGGGAA AGCGTC              ATCCGGGAGGAAGAG  50 100
   Bphy_0713 NONE
   Bphy_0712 NONE
   Bphy_0711 NONE
   Bphy_0710  796978 ..  796991 -  -4.5  -3.68827   GAGTCATGAGTGAAA               CCGTC TCCG AACGG                GTAAGAATCAGGCAG  54 33
   Bphy_0709  795647 ..  795662 -  -6.8  -3.38726   CACGCTAAAAAATCA              GGCCGCG ATC CGC-GCC              TTCCCCACCGTATCG  56 7
   Bphy_0707  793339 ..  793367 - -13.8  -3.71649   CGCGGAAAGCCCAAA       GGCGGC-GGCGCG TATG CGCGCATGCCGCC        CGTCGTGTCAGTCTG  91 33
   Bphy_0688  774863 ..  774890 - -19.2  -5.44119   TCGAGGGCAAAAAAA        CGGCCACATCGC GTGA GCGATGCGGCCG         TTGCTATTGGCTGCC 100 72
        pepN  771185 ..  771202 - -12.7  -5.95539   TCGCAAATAAAAAAA             GCCGGCA CATG TGCCGGC              TTCCGACTTCGCTGG 100 53
   Bphy_0685  769717 ..  769737 - -12.6  -5.56263   AGCAGAAAACAAAAA            GCCCAGTC GCGAT GACTGGGC            TTTTTGTTTGATTCT 100 200
   Bphy_0682  765807 ..  765822 -  -3.2  -3.72893   CATGGGCCGATGAAA              GTACGA CCGA TCGTGC               CGCTATCGACCGTCT  54 434
   Bphy_0679  764685 ..  764709 -  -4.2  -4.19817   GCGAGCGACGCAAAA         GCG-TGGGTGC ACGA ACACCCGGCGC          CTCGTTTAGGGAAGC  65 115
   Bphy_0678  763552 ..  763564 -  -4.7  -3.61398   GCGGCCGCCGAACAA                CCGCG TGC CGCGC                GTGAGCCGCGGCGAT  55 334
   Bphy_0675  761324 ..  761336 -  -3.3  -4.17762   GACGTGCGAAAACAA                CGCGA AAA TCGCT                GGTTCACCATTGTTG  62 216
   Bphy_0674  759805 ..  759836 - -19.6  -3.86524   ACATGTCGGCACAAA      CGAAAAAGGCGCCG CAAA CGGCGCCTTTTTCA       TGCTGCGAGTACTGC 100 47
         rph NONE
   Bphy_0666 NONE
   Bphy_0665  750634 ..  750645 -  -5.8  -3.32343   TGGACATCGCCATAA                CTCG TACA CGAG                 ATATATGTTAAGCGT  52 317
   Bphy_0664  749843 ..  749862 -  -6.3  -4.08919   AAAGCGCAAAGCAAA            CCGGGCG GACGCG CGCGCGG             GTGGCGCGGCAACGT  65 282
   Bphy_0663  748223 ..  748275 - -27.1  -2.56596   CTTTCGACTAACTCA GCAAGCG-AAGCGGCCCCGGCGTG GTGCAT CGCGCCGGGGCCGCTTGCGCTGGC TCGTGAGCCGGGATT 100 39
   Bphy_0662  747453 ..  747497 -  -3.4  -3.57144   TGTCCGAGGCCGAAA CGC-CCGGGACTGGCCCGCCAA GGC TTGCCGGGCGGG-CGCGATGCG CATTCGATCGCTTGC  51 405
   Bphy_0660  744153 ..  744168 -  -8.2  -3.05384   CGCCCGTTCACCGAA              CGCGCC CGAG AGCGCG               CTTATCGCAACCATC  56 238
   Bphy_0640  720941 ..  720957 -  -5.8  -4.58663   ATCAGTCTGCAAAAA             GGC-GCG TTGA CGCAGCC              GCAAATCGACACACT  76 379
   Bphy_0637  716917 ..  716930 -  -4.5  -4.25104   CTGGGCGTACGAAAA               GCCGT ATGC ACAGC                TGCTACAGGCCGACG  66 416
   Bphy_0634  712659 ..  712684 - -14.7  -5.10163   AAGCTGAAAACAAAA         GGGCCGCCGGCA TCA CGCCG-CGGCCC         CTACGAACATCGAAC 100 154
   Bphy_0633 NONE
   Bphy_0632  711043 ..  711070 - -12.7  -3.85698   GTTGGTTTCGAGAAA        GCCCCGAGGGA TAAGAT TCGCTCGGGGC         TTTCTGGGCTTTGGG  86 154
   Bphy_0627 NONE
   Bphy_0626 NONE
   Bphy_0625  701818 ..  701872 -  -7.7  -3.05762   AAGGAAGAACTAAAC GGGCAA-CGCGGCGCCGCAGGAAAAA ACCG TTAATCCTTCGGCGAGGCGGCCGCCC CATGACTAAGCCAGT  56 0
   Bphy_0623  699538 ..  699553 -  -2.4  -2.88663   ATGCACTGGCACAGA              GCGGCC ACAC GACCGT               CAGAATGACCTCACG  40 110
   Bphy_0622 NONE
   Bphy_0621 NONE
   Bphy_0620  696254 ..  696269 -    -4  -3.55622   GGGAAGTTTGGGAAA              GCGCGTA TTT TACGC-C              ACGCCGCCCGCCACG  49 103
   Bphy_0619 NONE
        ribH NONE
        nusB  693984 ..  694010 - -11.4  -4.56978   CGCGCAAACAACAAA         CGCGGGCCCGGC AAC GCGGGACCCGCC         TGCATCGCCAGCAGC  95 69
   Bphy_0616  692693 ..  692710 - -12.7  -4.32046   TCGGCAAAAATGAAA             GGGCACC TTAC GGTGCCC              TTTTTAATGGTCGGC 100 52
   Bphy_0614  689250 ..  689267 -  -8.4  -2.70932   CGTCGCCTGCAAGCA             GGCCTG AGCTTA CAGGCC              GAGTTCGTTCCACAG  53 17
   Bphy_0613  688432 ..  688465 -   -19  -4.26076   CGAGCCGGACGAAAA     CGGCGCAATGTCGGC TCAAT GCCG-CATTGCGCCG     TTTTCGTTTTGTCGA 100 63
   Bphy_0611  687194 ..  687240 -  -9.4  -3.53012   CCGGCGCGTGCGAAA CCGGGCGCTCGGCAGCGCACA ATCCGG TCCGCGCTGACGAA-GCCCAG GCGCGGCAACGAGGG  66 458
   Bphy_0608  685740 ..  685756 -  -7.2  -5.40072   TTTCCTTCAAAAAAA              CGCCCC GACGG GGGACG              CACTGGCGCCGGCAG  95 121
   Bphy_0607  684914 ..  684933 - -10.7  -5.26316   GCACGCTACAAAAAA            GCCGCCT TCAGGG AGGCGGC             TCTCACGCTGGATTT 100 244
        trmB  683934 ..  683959 - -15.4  -4.87626   GCCCAATATGAAAAA         GGCCCGCGGC AGGAAG ACCGCGGGCC          TTTTTTGTCTCAGTT 100 55
   Bphy_0602  680088 ..  680112 -  -9.3  -5.31519   ATAGCCAAACAAAAA         CCCCGCTCAG CGTCAT CTG-GCGGGG          TTGCATGGCGAACCG 100 252
   Bphy_0600  676697 ..  676738 - -20.3   -4.2558   CACGCGGCATCAAAA CGTCGAAGGCGTTCTTCGA TAAC CCGAAGAACGCCTTCATCG  CCTGCATTTTACCTG 100 258
   Bphy_0599  675852 ..  675872 -  -5.3  -3.05384   GGGCGTTCGAGGCAA            GCATGCTGC GTC GCAGCGTTC            CAACAGGGTCTTGGC  49 107
   Bphy_0598  675470 ..  675484 -  -9.2  -3.13403   GGCGCCTGATCAACA               CGCGCC TGA AGCGCG               AACTGCAGATGCAGT  60 141
   Bphy_0596  673183 ..  673200 - -12.7  -5.24799   CCAGAAATACAAAAA             GCCACGG CATG CCGTGGC              TTTCATGATTCGAAC 100 247
        argD NONE
   Bphy_0593  671132 ..  671146 -  -8.6  -2.60901   AGATCTCGAAGGAAG               GCATCA CGG TGATGC               TCGTTGAGCAAAATG  53 328
        radC  663275 ..  663320 -  -4.6  -3.07994   CGGAACGGCAGTCAA CGTGGCCAGCTAC-GCGTGGAG CGCG CTCCCGGCAGTCG-TGGCCGCG CCTCAAGGCCAGCCG  46 28
        rpmB NONE
        rpmG  662599 ..  662630 - -17.4  -4.07568   CGGGGGTGCGCAAAA      CCAAAAAGCCCCGC ACAA GCGGGGCTTTTTGT       CGTCAACCGGCTGAA 100 48
   Bphy_0582  660757 ..  660785 - -16.1   -4.4078   GCGGTTCAAGGAAAA        GGCCATCGACAGT CGC ACTGTCCATGGCC        TTTTTCATATGCAGC 100 50
   Bphy_0575  652615 ..  652659 -    -9  -3.33162   GAGGCCATTGCAGAA GCTGCATGCGGCGCCCGTCG ATGCG CGGCGGACGGTGCGTGCTGC GCCGAAGCGTAGGCA  63 54
        ileS NONE
        lspA NONE
   Bphy_0572  647786 ..  647806 -  -7.5  -3.21218   ATCGTCCACGATGAA            GGTGAGCGC CGC GCACTCAGC            CTGTCACGCTCGCAT  54 21
   Bphy_0571  646685 ..  646695 -  -2.4  -4.17556   GAGAGGTTGAAGAAA                 TGGC GGC GCCT                 GTCATTGCAACGGAG  60 54
   Bphy_0570  646140 ..  646165 - -16.2  -3.43151   CGAAGCACGAACGAA         CGGCGTGGGT GTCACA ACCCACGCCG          TTTTGCTTTGCCATC  93 73
   Bphy_0567  642719 ..  642735 - -10.8  -5.42514   CCAGAAACGAAAAAA              CCCGGC ATGAA GCCGGG              TTTTCAAGGCTGCGG 100 51
   Bphy_0564  638756 ..  638780 -  -3.5  -4.06904   CGATCGAAGCAGAAA         CGC-ATGCCG ATACAA CGGCTTAGCG          ATGTATCGCGGCCAT  59 60
   Bphy_0562  637455 ..  637481 - -17.3  -4.62336   AGCGGACGCGAAAAA        GCCGGCGC-GCC TTGC GGCTGCGCCGGC         TCGTGTTCCAGCCCC 100 71
   Bphy_0561  635111 ..  635133 - -12.7  -5.27023   ACCGCAAAAACAAAA           GGCCCGTCC AAAAA GAACGGGCC           TTCGCGACGAGCGAA 100 46
   Bphy_0560 NONE
   Bphy_0559  633324 ..  633364 -    -8  -3.35679   GTGTCGTACGCACAA  CGGCGCGGCGCGGGCTAG TCCGC CTGGCGCGTGCTGCGGCG  CCTTTTACGGCGCTC  59 65
   Bphy_0558 NONE
   Bphy_0557 NONE
   Bphy_0556 NONE
   Bphy_0555  627337 ..  627354 -  -5.6  -4.29432   GAAACGTGATGAAAA             CGTTTC GGACCT GAAACG              CATGTGTCGAAATAC  71 93
   Bphy_0552  624748 ..  624771 -    -8  -2.59177   ATGGGACAGATCAAG          GACGGCTGGC GCAC GCCGGACGTC           ACCTTCGATGAAGTG  50 209
   Bphy_0550  621812 ..  621825 -  -3.7  -4.75174   GATGCAAGCGAAAAA               GCACC TCAA GGAGC                AAAACGATGCGCGAA  74 370
   Bphy_0548  620217 ..  620232 -  -4.6  -3.21416   GACGGGGAGCAGCAA              GCGTTG CGCC CAGCGC               TTCTGCTACGGCTTC  48 31
   Bphy_0547  618583 ..  618611 -  -9.5  -2.62616   TCATGCGCGAGAGCA        GCGAAGCGCAC ATCGATG GTGCGCCGCGC        GCCCCATTAGCGTTC  56 67
   Bphy_0546  616673 ..  616699 - -10.1   -3.9122   CATCGCGCGAAAGAA        CGCCTGCAGCGC CAAG GCG-TGCCGGCG         AAGCGGGCCGATCCC  75 434
   Bphy_0544  615374 ..  615401 -  -7.7  -3.50219   AACATCCGCAGACAA        CGCGCGTCA-GG TCGTG CCGTGAAGCGCG        TCGACGGGAAGCGGC  62 4
   Bphy_0542  614028 ..  614077 -  -3.6  -3.05384   TGCTTCTCCAGTGAA GTGCAG-GC-TCGATCGTCTCACAC AAC GCG-GCGTCGATCGAGGGTCTGCAC GGTGATTCGTCTGCA  43 47
   Bphy_0541  612651 ..  612672 - -10.8   -5.1861   CGCAGCAGTAAAAAA           GCGCCACG CCGTAC CGCGGCGC            TTTCACATGACGTCT 100 42
   Bphy_0538 NONE
   Bphy_0537  608420 ..  608442 - -14.1  -3.52906   CGAGGCTGAGAAAGA           CGCACCGCC TCGAT GGCGGCGCG           GTGTGTGCGTTCGGA  86 97
   Bphy_0536  607371 ..  607383 -  -3.3  -3.09516   CCGCGCATCATTCAA                GCCTG CCG CAGTC                AACGCTCTTGATTCT  43 221
         adk  606608 ..  606625 -  -9.8  -5.63517   TGCCCAAATAAAAAA             CCCGCC GTGAGA GGCGGG              TTCCCGATGTGCTAC 100 52
   Bphy_0534  605609 ..  605648 - -20.2  -3.53012   GTCCGTCGCTGCAAA  CGAAAACGCCTGCGCAGC TTTC ACTACGCAGGCGTTTTCA   TTCCAGCGCTATCGG 100 43
        rpsT  602352 ..  602367 - -11.8  -5.63517   GCGCCAAACAAAAAA              GCCCGC CAGA GCGGGC               TTTCATGACGCAGCG 100 86
   Bphy_0529  600444 ..  600466 - -16.3  -5.45802   GCCTGAAAACAAAAA           GCGCCGGGT GTCGA ACCCGGCGC           TTATGTTTTGCGGAC 100 58
   Bphy_0527  598597 ..  598607 -  -8.2  -4.51812   GGCGACAAGAAGAAA                 GCCG AAG CGGC                 GGCTTCGCACAAGCA  79 120
   Bphy_0524  595349 ..  595398 -  -6.4  -3.27923   CTGGAACATCATCAA GCGTCATGCGCTGAC-GGCGCATG TGCA CGCGCCCCTGTCACCGCAC-ACGC TGCGGCACGCGTTCG  54 211
   Bphy_0520 NONE
   Bphy_0519 NONE
   Bphy_0517 NONE
   Bphy_0516  587629 ..  587645 - -10.8  -5.26875   GCGTGAATCAAAAAA              CGCGGC TCGTG GCCGCG              TTCTTTCGTAGTCGC 100 67
   Bphy_0514  585743 ..  585781 -  -7.4  -2.78384   GCGCGGGCCATCACA  GGCCGCGCGTTCGTGCT TCGAGC AGCACGCACGCG-ATCC   TGCCTTCGACACGGC  50 90
   Bphy_0513  584422 ..  584432 -  -8.2  -3.31905   ACGCCGTACACAACA                 GCGC GCG GCGC                 AGCCAAAACGGAATC  59 49
   Bphy_0512  582971 ..  582989 -  -4.4  -3.55563   AGGCGATCCGCGAAA             TCGGCGCC GAA GGCGTCTA             CGACGGCCAGATCGT  51 270
   Bphy_0510  581500 ..  581512 -  -7.7   -2.5001   AGAACTGGCACGAAC                GCTTC GCG GAAGC                CCTGCGCGACTGGCC  50 310
   Bphy_0508  580459 ..  580475 -  -6.5  -3.38046   CGTTCAGTCGAAAGA              GCGTTCC GGC GGAATGC              CGTGGGTTCAGGTAA  56 33
   Bphy_0507 NONE
   Bphy_0506  578209 ..  578229 -  -4.5  -3.97026   GGTGAAAGAAAAAAC            CAGACCGGC AAA GCCGCGCCG            CAGGTGACCACTACA  59 36
   Bphy_0498  567871 ..  567905 -  -2.7  -4.11394   ATGCCATGCGCAAAA    GACCTGACGGGCGCGA GGCG TCGCGAGCGGC-GATC     AATGGGAGCGGCCGC  57 90
   Bphy_0497  566248 ..  566260 -  -6.2  -3.24747   GCGTGACACCAGGAA                GCCC TTAAC GGGC                GTTCCGGTGCGTTGC  50 80
   Bphy_0496  565207 ..  565233 -  -9.3  -3.33261   CTCGAAGCGCTATAA         CCGCACAGCGC TTCCG ACGCCGGGCGG         ATTAGCGCGTCGCCG  63 27
   Bphy_0488 NONE
   Bphy_0487 NONE
   Bphy_0486 NONE
   Bphy_0485  553557 ..  553581 - -17.2  -4.61873   GTGTAGAAAGCAAAA          CGGGGTGGCT CCTTT AGCCACCCCG          TTTCTTTTCGCGCTA 100 38
   Bphy_0481  547905 ..  547924 -   -15  -4.13767   TTTCCGACTGCAAAA            CGCCACGG CATG CCGTGGCG             TTTTTTTTGCGCGCT  95 207
   Bphy_0477  540535 ..  540557 - -12.6  -3.40403   GGTGCCCTATGAGAA           CAGCGCGGGC TTT GCCAGCGCCG           AAGAAATTCATCGCG  73 276
   Bphy_0475  538468 ..  538517 -    -5   -4.2349   GCGCCAGATCGAAAA CGCACTGCAC-GAACTCGCCGACG ACTT CTTCACCGAGTTCTGCGCCGT-CG TTCAGGCGAAGCACG  68 394
   Bphy_0468  530827 ..  530855 -  -7.3  -2.60941   ACGACAGCGTACAAC        GTGGAGCGGCGCA CGG CGCACCGCTTCAA        TAGAAGGATTCCTCA  49 38
   Bphy_0467 NONE
   Bphy_0466  528816 ..  528841 - -20.5  -4.85782   CCTTCCAAAAACAAA         GAGCCCGGCTC GCGA GAGCCGGGCTC          TTTTGCATCGCAGGA 100 55
   Bphy_0456  517876 ..  517913 -  -9.2  -3.51924   GTTGTATGCAGAGAA  CGGGCGCGAC-T-GGC CTGATTTT GCCGATGCCGCGCCCG   CGGAATTCAGATCTT  66 32
   Bphy_0455  517494 ..  517522 - -15.2  -3.92542   CCGATGTCGAAATAA        GGCGCCGCGCGC TCGAG GCGCACGGTGCC        GGGGTTGTCGAGGAT  93 157
   Bphy_0454  516352 ..  516379 -    -4  -3.01712   GCGCGCGCCGCAAGA        CGCGAGCAT-GAC GCT GCCGAGGCACGCG        GGACGGCGCCCGCGC  43 87
   Bphy_0453 NONE
   Bphy_0452 NONE
   Bphy_0451  513675 ..  513691 -  -3.6  -2.83822   CTCAGGGCACAACGA              TGAGGC CGTAC GCCTCG              CTGAGCTCGCGCAAA  41 399
        moaC  511558 ..  511573 -  -2.4   -3.7282   GGAGCTCATGAAGAA              GTACGG CACG CCGCCC               AAGGACATCAACAAG  53 157
   Bphy_0439 NONE
   Bphy_0438 NONE
   Bphy_0437  495458 ..  495497 - -18.8  -3.55548   GAACAGCTCGGGAAA  TGAAAAAGCCGCTGTTTC GTGA GAAACAGCGGCTTTCGCA   TTTGGTGGCGAATCA 100 192
   Bphy_0433  492106 ..  492123 - -14.1   -3.8572   GACAAGATGACCAAA             CGCCGCC CGTA GGCGGCG              TTGTGCTTCATTGGC  91 59
   Bphy_0432  491285 ..  491307 -  -8.5   -3.6682   TTCTAGCGATTGAAA          CGAGCACGTG GGGG CACGTGCT-G           CTGCTCAAACTCGCG  65 273
   Bphy_0429 NONE
   Bphy_0428  487629 ..  487670 - -12.9  -4.63527   CCATCACCTCAAAAA GCGAAGGGCGCGGCCT-CGA TTA TCGCAGGCCGCGCCCCAACC CTTGAGACGATGCTC 100 39
   Bphy_0427  486726 ..  486754 -  -5.2   -2.9162   CAATTGTGCAAACGA       TGCCAACGCGGCC CGAA GGC-GCGTTCGCG        GGCGACCCGCATGAT  45 161
   Bphy_0426  484814 ..  484826 -  -6.2  -3.68351   GCGCGATTACGCAAA                GCGG ACGCG CCGC                CTTGACCTTCGTGTT  57 324
   Bphy_0423  482162 ..  482172 -  -3.2  -3.53012   GGCCCTGCCGGCAAA                 CGGA GGA TCCA                 GCAGCTGGTGATTAC  49 344
   Bphy_0422  481779 ..  481810 - -15.9  -4.45168   GCGTGAAAACATAAA      GACGGTCAGGCGG GCAGTT CCGCGTGACCGTC       CAGGCGTCCGTATGC 100 115
        glpD  479465 ..  479498 -  -2.2  -2.84617   CACGCGAAAAATGTA     GTGCCTGCGCGGAT TGTTGC ATGCGCGGCGGCGC      GGTGGAATCGCCGCG  40 93
        glpK  477788 ..  477818 -  -4.6  -3.71148   GAAAACGGATGGAAA      GCGCCGCCCGCGT GAATCG ACGCGCG-GGCGT       GAAGGCAGGCACTAC  57 105
   Bphy_0418  477022 ..  477037 -  -6.8  -4.07568   GGCTGTTGGCGAAAA              GCG-GGC GCT GCCGCGC              GGCAGTCAAAAACTG  68 71
   Bphy_0413  471940 ..  471982 -  -5.3    -3.516   GAAGAGACGAAAAAC GCATGGCGCCTCAGCG-CGG AGGT CCGGCGCGAGGGCGCCCGAC TGCACGGCGGCGGGA  55 133
   Bphy_0412 NONE
   Bphy_0411 NONE
   Bphy_0410 NONE
   Bphy_0409  468054 ..  468069 -  -6.8  -2.90901   AGAGCGTTAAGGATA              CACCAC GGTC GTGGCG               GGATCGTGTCCCCGA  51 103
   Bphy_0408 NONE
         lnt  465155 ..  465179 -  -7.1  -2.53012   AACGTGAGCATGAAG          TGCCTTGAAGG GTG CCTTTCAGGCA          GGACGCGATTGCCTT  48 223
        glyQ NONE
        glyS NONE
   Bphy_0404  461409 ..  461425 -  -2.2  -3.71124   AGCAGCAACAGAGAA              CGGATG AAGCG CATCGG              CGTGGTCAGTGGGTG  52 60
   Bphy_0403 NONE
   Bphy_0402  459717 ..  459732 -    -4  -4.53225   AGCAAAAAAACCAAA              TGGCGAC CGC GTCGC-A              GACAGAAAAAACCAC  68 40
   Bphy_0395 NONE
   Bphy_0394  450044 ..  450062 -  -9.5  -3.32807   TGAAAAGATGAGGAA             CGCCCGC GCTGA GCAGGCG             TAAAAAGCACACTAC  63 37
   Bphy_0392  447135 ..  447161 -  -4.2  -3.56273   CGGATGACGAGACAA         TCACGTCCGCGA TCA TCGCGCTCGCGC         ACTCGCTGAATCTGC  53 268
   Bphy_0389  442304 ..  442316 -  -3.3  -4.08767   GGTAGCGGCCGAAAA                GCTGA TGC TCGGC                GAACCGTTCGACGCG  60 335
   Bphy_0370  418089 ..  418099 -  -4.6  -3.14602   CTTATGCGAGGAACA                 GGCG ATA CACC                 GGGTTCGACGTCTCT  48 1
   Bphy_0369 NONE
        queF  416339 ..  416350 -  -7.2  -4.24984   AGACAAAATGACAAA                CGGC TACT GCCG                 GGCAGTACGCAAATT  71 17
   Bphy_0364  411874 ..  411902 - -11.7  -6.08342   GAAGAAATAAAAAAA        GCGGCACTATGCA GTT CACACAGCGCCGC        TTGCTCGACGAGGCG 100 53
   Bphy_0361  408435 ..  408445 -  -4.6  -3.51232   GTCGCTGCAAACCAA                 CGAC GGT GCCG                 ATCCGATGTTCCACG  53 357
   Bphy_0352  396448 ..  396476 -  -6.7  -2.75826   TACGTTAAGACATCA        CGATGACGTTGGC ATT GCAAACATCATAG        GTGGCAATCGGCGTC  50 117
   Bphy_0351 NONE
   Bphy_0350  394065 ..  394089 -    -2  -3.36803   TAATGCGAGTGATAA         GGGCTA-GCGC TGCG GCGCCTTGCGC          AATTCGTTGATCTGC  44 4
   Bphy_0349  393852 ..  393866 -  -5.6  -3.11192   GACATGATCAGTGAA               TGACGC CAC GCGGCA               GAAACACGAGAAAGT  49 3
   Bphy_0348 NONE
   Bphy_0347 NONE
   Bphy_0346  390796 ..  390830 - -16.5  -3.95852   ACGGCACGAAGCAAA    CCGGCGGTGC-AGGCA TCGT TGCCTTGCACCGCCGT     TCGTATTTGCAGAGC  95 46
   Bphy_0344  387775 ..  387797 -  -5.5  -3.29144   CTATCGCGTGCAGAA           CGAGATTGC TGCGG GCAGCCTCG           TCGTCGTGCTGCCGC  51 178
   Bphy_0342  386102 ..  386124 -   -17   -5.5074   GAATGCAAGAAAAAA           CACCCCGCCC ATC GAGCGGGGTG           TTTTTTTAAGGGCAG 100 65
   Bphy_0339 NONE
   Bphy_0338  379679 ..  379698 - -10.6   -4.0162   CCCGGATATGAGAAA            GGGCGGCC TCAC GGTCGCCC             TTTTTGCTCGACAGG  80 49
   Bphy_0337  377746 ..  377761 -  -4.6  -3.84825   TCGAGCGATACGAAA              GCGCAT CAGG AAGCGC               GCGTGCTTGAAGTGA  60 497
   Bphy_0331 NONE
   Bphy_0330 NONE
   Bphy_0329 NONE
   Bphy_0328 NONE
   Bphy_0327  369148 ..  369172 -  -9.1  -3.53343   AACCTGCTTTTGAAA          CGCCCGGGGAC GAG GGCCGCAGGCG          AGGCTGCACGCGGCG  66 61
   Bphy_0326  367440 ..  367464 -  -9.2  -4.07568   GGTGCGGCCGGAAAA          TGCCCGCCAC AGGAG GTAGCGGGCT          ACAGAGACTTGCGCA  76 24
   Bphy_0325  366879 ..  366896 -  -9.8  -5.63517   CTCTCAAACAAAAAA             CCGCCC GATGTA GGGCGG              TTTCGCGGGGTCAAG 100 59
   Bphy_0324  366117 ..  366136 - -10.6  -3.90588   GAGCGTCGAATCAAA            CGCGGCGC CAAA GCGCCGTG             TTTCCGCCGGCTCCC  78 54
   Bphy_0323 NONE
   Bphy_0322 NONE
   Bphy_0321  362976 ..  362993 -  -4.7  -4.09685   GGTGATGCTGGAAAA             GCGCCCG CCGT CGGGCAT              CTGGGGCGGCTTGTG  64 328
   Bphy_0318 NONE
        lolB NONE
         ipk NONE
   Bphy_0315  356701 ..  356723 -   -12   -4.2349   CGCCGATATGCAAAA           GCGCCGCA TTCATCG TGCGGCGC           CTTCGCGAATACTTT  89 39
   Bphy_0314  355901 ..  355924 - -15.2  -5.87688   ATAAGCGAAAAAAAA          CCCGCCGGGG CGAA CCGCGGCGGG           TTACGTCGACCGTTC 100 70
   Bphy_0313 NONE
   Bphy_0312  354018 ..  354031 -  -3.7  -3.57039   GATGGAGAAGTACAA               CGGAC TGCA GGCCG                CGAAGAGCGCCTGAT  51 109
   Bphy_0308  350838 ..  350862 -  -2.8   -5.5604   GCAAGCAATAAAAAA          GGGCGTCA GGCGACCGA TGACGCTC          TTTTCGTATTTCGCC  88 63
   Bphy_0305  347806 ..  347824 -   -11  -4.20367   GGCGCGAACAAACAA             CGTCATCG GAA CGACGACG             AAGGCAACGATCGAT  89 396
   Bphy_0304  345578 ..  345606 -  -2.9  -3.90588   GATGGTGGAAGGAAA        CGGCCAGCAGCTC CAT GCGCTGCTCTCGG        ACAACGTCATATACG  56 439
   Bphy_0301  343520 ..  343546 - -14.5  -5.16133   ATCAGAAGATAAAAA        GCCCCGC-CTTC TTGC GAAGAGCGGGGC         TCTGTCTGTAACGGG 100 79
   Bphy_0300 NONE
   Bphy_0299 NONE
   Bphy_0298 NONE
   Bphy_0297  340106 ..  340126 - -16.1  -2.60496   TTCGTCGCTAAAGAG            CCGGCGCCC TCG AGGCGCCGG            TTTCTATTTGCGGCT  78 40
   Bphy_0291  331318 ..  331339 - -15.1  -4.17089   CGCAAACTCGGAAAA           GCGCCACGG GGAA CCGCGGCGC            TTTTTTTATGCGCGG 100 64
   Bphy_0288  327881 ..  327900 - -13.6  -4.55128   ACGCTGAAACGAAAA            GGCTGCAC GCGC GTGCAGCC             TTTTTCTTTTGGACG 100 48
   Bphy_0282  323212 ..  323241 -  -9.9  -2.90486   AAGAAGTCGTAGACA       GCGCCGCCCTCGAC CCA GTCC-GGGCGGCGT       TGTGCTTGATGGGAC  62 139
   Bphy_0273  314947 ..  314961 -  -2.9  -2.87253   CATAAGCGATAAGTA               GAAAA CTAGT TTTTC               GGCGTGCGCAGCGCG  40 16
   Bphy_0272  314443 ..  314488 - -21.3  -3.29144   GCATGCGCGCTACAA GGCGGAGTTC--GGGCGGCGC GTTCAG GCGCCGCCCTCGAACCCCGCC TGACGCCACGCCTCG 100 1
        gpmA  310250 ..  310266 -  -5.7  -4.59773   CCGCAGCGCCAAAAA              GTGCCGC CGC GCAGCGC              GTGAAACGCGTGAAA  79 277
   Bphy_0264  308411 ..  308453 - -19.9  -3.64822   ATCGCGCGAGGGAAA GTGTCTTCGCGGCGCGCGG TGGCG CAATGCGCCGCGAAGACAC GGTTACGTCAGAAGC 100 41
   Bphy_0263  307445 ..  307457 -  -6.9  -4.08692   GAAGGCGCTGGAAAA                GCCGG TTG CCGAC                GTGCTGGCCGCGTTC  68 136
   Bphy_0255 NONE
   Bphy_0254  298763 ..  298791 - -16.8  -2.59431   CGTGTGCACAACTGA        GCTGTCCACACC ACAAG GGCGTGGACAGC        CGCCTTCGGCGGTTC  83 120
   Bphy_0252  297842 ..  297854 -  -2.6  -3.79473   ACGAGAAGATTGAAA                GACG GGACG CGCC                TGACTCTCAAGCCCT  52 32
   Bphy_0248  293785 ..  293799 -  -2.1  -3.54424   GTGCATTCGGCGAAA              CTTGCC GGAG GGCA-G               AAACGGGCCCGATCT  47 422
   Bphy_0247  292363 ..  292379 -  -5.1  -3.73068   TCGCGAAGCTAAGAA              GAACGCC CCG AACGTTC              ACATGGAGCCGGAGG  58 472
   Bphy_0241  279190 ..  279203 -  -8.1  -4.13304   AAATCATTTCCAAAA               GAGCG CGGA CGCTC                GCCGTCTAGATGCCG  71 31
   Bphy_0240 NONE
   Bphy_0239 NONE
   Bphy_0238  269616 ..  269632 -  -6.5  -3.17714   GCAAACCGGCATCAA              CGCTCAC TCG GCGAACG              CATCGATCTTCAAGA  54 309
   Bphy_0235  262254 ..  262278 -  -3.6  -3.75629   CAGCCGCAAGCGAAA          CCCTTAGCTC CGGAT GAGCTAAAAA          ACGCGCGATTGTCCA  54 57
   Bphy_0230  254606 ..  254622 -  -8.7  -3.55444   GCGGTAGGCCGCAAA              TGCCCAT CGG ACGGGCA              GTTTGCCACTTTGCC  66 190
   Bphy_0228  252957 ..  252979 -  -4.6  -2.94099   GCGCTCGAGCAGACA           GGCGGCGCCG TCG CGGTGGCGGC           GGACAGACTGCAGGT  46 195
   Bphy_0219  241570 ..  241593 -  -8.1  -3.51934   GCTCGCGGAGAAAGA          GCGCTTTCG CGATCT CGAACGCGC           GTACTCGTACAAGCA  60 256
   Bphy_0214  236218 ..  236255 -    -2  -3.50447   GTAAGCCGTAGACAA   GTCG-AAAAGCAAGAAG ATCTG CGGCTTGCTTTTGCGCC   GCGCGCATTCATATA  47 378
   Bphy_0204  227381 ..  227401 -  -4.6  -2.96216   GTCGATCAGGAGATA           CGGCG-TGC TCAT GCTGCGCCG            CTTTCTTCGTCCGCG  45 13
   Bphy_0203 NONE
   Bphy_0202  226203 ..  226227 - -19.3  -3.18199   CAAGGCTGAACGCAA          CGACGCGAGCC TGC GGCCCGCGTCG          TCGAGCGTTTGCGGC  91 42
   Bphy_0195  218758 ..  218770 -  -9.1  -3.21199   TATCTATGAAGGCAA                GACGC GAA GCGTC                ACGCAACGGAAACCT  61 114
   Bphy_0194  217325 ..  217379 -  -3.5  -3.65446   CAATGAAAGAACGAA CGGATGGACGGTTCATGCTATTC AATTCATGG GATTTGCATGAACCGTCGGCGCG AATCGAGCGCTTGGA  51 150
   Bphy_0193 NONE
   Bphy_0192  216060 ..  216084 - -14.9   -5.1417   GGATAAAACGAAAAA          CCCCGCCTGGC AAT GCCGGACGGGG          TCGATGGGGAACGTG 100 65
   Bphy_0191 NONE
   Bphy_0190  211531 ..  211550 -   -15  -5.27938   ACGCGCAAACAAAAA            GCCCGTCG TGAC CGACGGGC             TTTTTTCATTGCGTG 100 434
        argS  208959 ..  208996 -  -6.3  -4.86385   ACCTGCAAAAAGAAA   TCTGGAATGACCGTCGAT TAT AGCGACGGTCATT-CGGC   TCGCGTCCCGAATAC  81 63
   Bphy_0187  208011 ..  208035 -  -9.2  -3.36557   AATCAGGGGAAGTAA         CGGCGGCGGGC CATT GCGCGCCGC-G          ACCGCTACGGATTCG  63 126
   Bphy_0186 NONE
   Bphy_0185 NONE
   Bphy_0184  205583 ..  205596 -  -5.9  -3.53012   CGTGGCGGCTGCAAA               CGACG CGCG CGCCG                GGCGGGCAGTCACGC  55 168
   Bphy_0183  203872 ..  203897 - -14.7  -3.47526   GCACCAACGCAAACA         GCCCGG-CCGCA TCA CGCGGGCCGGGC         TTTTTTGATGCGTCG  90 55
   Bphy_0181 NONE
        aceK NONE
   Bphy_0179 NONE
   Bphy_0178 NONE
   Bphy_0177  197338 ..  197356 -    -3  -3.18264   GTCCTGATCGAGCAA             CATGCGGG TCT CCTGAATG             TCTTTTTTCGTTTGA  43 46
   Bphy_0176 NONE
   Bphy_0175  195738 ..  195765 -  -7.6  -3.66654   CAGTGCAATCGGAAA        GGCGGCGTCAGC GATC GCTCACATCGCC         GTCGACGTAGCGCCA  64 5
   Bphy_0174  193830 ..  193866 - -21.7  -5.00138   CAGCGAAAGCAAAAA    CAATCGCCCGCTGCGCA GTA TGCGCAACGGGCGATTC    AGAGATCAGCGGAGA 100 52
   Bphy_0173 NONE
   Bphy_0172  190776 ..  190810 -  -6.3  -3.12895   CCCGTCACGAAGAGA    GACAGCGCGGGGCTCA TGCG CGTGCCTC-CGCCGTC     TTCATCAGTGCGTGT  50 4
        bioD  190069 ..  190079 -  -2.4  -3.54424   TTTGATTTGTCTAAA                 GCTC TCA GCGC                 GGCGCGGTACGCAGC  47 19
   Bphy_0170  188841 ..  188863 - -17.8  -4.98531   GCGCGAAACGAAAAA           GCCGCTTCGA CAT TCGAAGCGGC           TTTTTCGTTGGAGGT 100 143
   Bphy_0168  187149 ..  187161 -  -3.3  -3.19157   GACGAAGGCGAGGAA                CTTGC TAC GCAGG                TATTCAGCTAACGCC  45 61
   Bphy_0166 NONE
   Bphy_0165 NONE
   Bphy_0164 NONE
   Bphy_0163 NONE
   Bphy_0162 NONE
   Bphy_0161  181942 ..  181956 -  -5.7  -3.50393   CGCTACTCGATATAA               CGGTA GTTCA TACCG               ATAGTACGGATTCCG  55 242
   Bphy_0159  179943 ..  179963 -  -6.8  -2.57244   CCATGTACGAAGCTA           CCGACCGCG CCTT CGCGA-CGG            CCTATTTCCACTGGT  47 507
   Bphy_0157  178265 ..  178287 - -18.4  -5.45802   GCCGCAAAAGAAAAA           GGCCGCGCGC AAC GCACGCGGCC           TTTTCATTCATTGGA 100 44
   Bphy_0152  169729 ..  169744 - -11.8  -4.62803   TGAAATAACAACAAA              GCCGCC CGCA GGCGGC               TTTCCACGACTCACT  95 82
   Bphy_0151  167473 ..  167529 - -16.7  -2.51471   GATAATTTCATGAAT CGGCGCGGCTCGCGATTGGCGCGTGCGG TGCG CCACACGCGCTAATCGGG-GC-G-GCCG TGAATCCGAATCTGA  83 179
   Bphy_0150 NONE
   Bphy_0149 NONE
   Bphy_0148 NONE
   Bphy_0147  163639 ..  163675 -    -5  -3.71284   TGTTCAGCAAGACAA   GGTCGTAGGCGCG-GCGC GCG GCGGACGCGCC-ACGTCT   GCTTCAATGCGAAAA  57 64
   Bphy_0146  163242 ..  163269 -  -7.6  -2.57132   TGTTCCGCTGACAAG        TGTGTCGCGCAGC GTC GCGGCGCGAC-CG        TAGCCGACGCCGCCC  52 121
   Bphy_0145  162022 ..  162040 -  -5.3  -3.57561   CTCGAACGCGTGAAA            GCCGCCAT CGAT ATGGC-GC             TCTACGAAGGCGAAT  55 262
   Bphy_0143  157472 ..  157484 -  -6.3  -3.17075   TCGTCGGTAACCGAA                CTGAT GAA ATCAG                GTGAAGCCTCAGTGC  50 140
   Bphy_0139  153120 ..  153141 - -14.4  -4.10953   ATGCACGAAACGAAA           CGGGCGCC CATCGC GGCGCCCG            TTTTTTTGCTTCTAC  95 52
   Bphy_0122  131276 ..  131295 - -13.6  -5.00616   CGTCTGCTTAAAAAA            GGGCTGTG TGCG CACAGCCC             TTTTTGCTTTTTCAA 100 37
   Bphy_0120 NONE
   Bphy_0119 NONE
   Bphy_0118  128174 ..  128184 -  -2.4  -3.54543   AGGGAGCGGCTTAAA                 GCGG CAA CTGC                 GTGTCGAACTTGATT  47 10
   Bphy_0114 NONE
   Bphy_0111  120235 ..  120258 - -13.8  -3.36803   CAATTCGATGCACAA          GGCGCGACGC CGGC ACGCCGCGCC           TCTAGCGTAACTTAC  81 37
   Bphy_0110  118597 ..  118610 -  -9.5  -3.02144   CGATGCGCTCGAACA               GCCGC TGGA GCGGC                GTTAGGCGCTAGCTG  60 34
   Bphy_0103 NONE
   Bphy_0102  111930 ..  111966 - -11.4  -3.17392   CAGCGCCGAACTCAA    CCGGACGCCGCAGCGC GACTG ACGCCGCGGCGCGCGC    TCACTCGACGCGCAG  69 26
   Bphy_0100  109904 ..  109914 -  -2.4  -5.36441   CGGCCACACAAAAAA                 GCGG GGC CGGC                 ACGGCAAAGGCGATG  85 492
   Bphy_0099  109004 ..  109023 -   -15  -5.61881   CCGCAAAAAGAAAAA            CCGGAGCC TAAA GGCTCCGG             TTTCCGGTGTTTCGA 100 92
   Bphy_0098  107682 ..  107692 -  -8.2  -2.90075   GGCGGCGCAATCACA                 GGCG GAT CGCC                 GTGCGACGCGCACGT  55 10
   Bphy_0097  106874 ..  106890 -  -4.3  -4.09739   CCAATGTCGGGAAAA              CCCGCGA TTT TAGCGGA              ATCGAGCCGGCCGGC  61 94
   Bphy_0096  105225 ..  105240 -  -3.2  -3.75763   GTAAAACACAAAAAT              CGAAAG GCGG CTATCG               GGGAAGCGTGCCCGC  54 206
   Bphy_0095 NONE
   Bphy_0094 NONE
   Bphy_0093  101269 ..  101291 - -11.9  -3.61646   AACCCGATAAACGAA           GCGGCCCGG ACGCG CCGGGCCTC           ATGTCGGTCAAACGC  77 61
   Bphy_0092  100306 ..  100324 -  -2.2  -2.67501   GAAACATCGACATCA             CTCCGCTG CCG CCGCGAGG             CACTGGCGAATCTGC  38 4
   Bphy_0091 NONE
   Bphy_0090 NONE
   Bphy_0089   97127 ..   97145 -    -3  -4.11394   ACCTCATTGTCAAAA             CGCGTG TACCCGT CGCGCG             TCACGGTGCGACATG  57 369
   Bphy_0085 NONE
   Bphy_0084   93089 ..   93109 -  -6.8  -2.59742   CCGAAGCGGGACAAG            GCTTTGCG CGGTT CGCACAGC            GGCGCAAGGGGGCTC  49 133
   Bphy_0083   92688 ..   92705 -  -9.8  -5.37043   ATGCGAGATAAAAAA             GCCGCC CATGTT GGCGGC              TTTTTCAATGGTGCG 100 85
   Bphy_0081   90876 ..   90889 -  -5.2  -3.91897   GCGCTGATCCAGAAA               GCGG TGTCGC CCGC                GCTGAAGGCGGGCGA  60 236
   Bphy_0079   89361 ..   89388 -   -17  -5.27335   GGCCGCAAAGAAAAA        CGCCCTGCATGC GAAC GCATGCGGGGCG         TTTTTTTCTGATGCG 100 144
   Bphy_0077   86958 ..   86973 -  -6.8  -4.25104   CGCGCTTCAGTAAAA              GCTCGGG TCG CCCG-GC              GGGCGAGTCTTGAAG  71 1
        dapF NONE
   Bphy_0075 NONE
        xerC   84236 ..   84255 -  -7.8  -3.84674   ATTTCAGCAGAACAA            TGTGCCGC CCGA GCGGCAAA             GCAGAATTGACCGGC  67 64
   Bphy_0073   82989 ..   83004 -  -4.6  -3.96483   ATGCCAGGGAAATAA              CGCCTA ACTA TGGGCG               TTCACGCGATTTGCA  59 27
   Bphy_0072   81689 ..   81732 -  -5.9   -3.5936   TCCAAAGCGCCCAAA TGGCTGCC-CGGGCAGCGCGC CGGA GCGC-CCGCCCGCAACTTCCA CGAATGAACAGATAA  57 45
   Bphy_0071   80642 ..   80667 - -16.9  -5.79595   CCTGAAAAGAAAAAA         GAGGCGCACGA ATCA CCGTGCGCCTC          TGACGAAGCGTATCT 100 76
   Bphy_0070 NONE
        hslU   78402 ..   78429 - -24.2  -3.72027   ATGGCGCATGAAGAA        GGGCGGCGCTCC TCGC GGAGCGCCGCCC         TCTTGTTTGGCCGGC 100 51
   Bphy_0066   74324 ..   74349 -  -7.4  -3.44146   CCGCCCGAGAATCAA         CTGCGCGCCG TCAGCG CGGCGCGGCG          AAAAGCTTGGGCCGC  58 465
   Bphy_0064   73125 ..   73137 -  -3.3  -2.90496   CTTTGCGGGAAAGGA                GCGGT GTA ACAGC                GATGACGGCGCAGCG  42 150
   Bphy_0063 NONE
        slmA   71500 ..   71525 - -12.7  -3.28712   CGGCGCGTTGTACAA         GCTGTGACCGTC ATG GACGGTCA-AGC         GCAGAGTATATCGGA  76 69
        metX NONE
   Bphy_0060 NONE
   Bphy_0059 NONE
   Bphy_0058   66816 ..   66836 - -12.5  -2.83164   GTATCGATTACCAGA            TCGCGACGC CGG GCGTCGCGG            CCACGGCGAAGCGCG  66 142
   Bphy_0052   60236 ..   60252 - -13.7  -3.97368   CGCCCAACGCACAAA              GGCTGGC AAA GCCAGCC              TGTCAGTGCGCATTG  91 62
   Bphy_0051 NONE
   Bphy_0050   58547 ..   58557 -  -8.2  -4.11216   TCGTGAGCGGGAAAA                 CGGC GCG GCCG                 TCAGATGGGCCGCGT  71 26
   Bphy_0049 NONE
   Bphy_0048   54821 ..   54844 - -14.6  -4.86621   AGCCGCAATGAAAAA          CGGCGCCTGA ACTT TCAGGCGCCA           TTTTGTTTTGCTTCT 100 56
   Bphy_0034   40727 ..   40749 -  -4.7  -2.52464   TTTGGCGCGAATGTA           GCACGTCGC GTCAG GCGCTGTGC           ACTGCTCGAACATAC  42 13
   Bphy_0033   40239 ..   40251 -  -4.7  -3.53091   ACGCTTTTTTGCAAA                CGCCG TGC CGCCG                CTGTCGGGAATACCC  52 79
   Bphy_0032   37248 ..   37275 - -14.9   -5.5074   CAAGTCAATAAAAAA        GCGCAGTCACC GTAAAA GGCGACTGCGC         TTTTTGTTGCAGCCT 100 91
   Bphy_0029   32529 ..   32546 -  -9.1  -5.36441   CGCGCATATAAAAAA             GCGGCCT TCGA AGACCGC              TTTTTAATTTACTTC 100 34
   Bphy_0010   11468 ..   11500 - -17.7  -4.08767   TCGACTCGCTGAAAA      GGCGGGCGAACCGCA GCG CGCGGTTCGCCCAAC      GGGAGCACGACGCTC 100 39
   Bphy_0009   10968 ..   10983 -  -4.6  -3.51411   AGCGCCCGAAACCAA              GCCGAC AATC GCCGAC               GATTCAAAGACCCGC  52 84
   Bphy_0004    5921 ..    5942 - -11.6  -5.00138   TAGTCAAATGAAAAA           CGCCAACC TATTCC GGTTGGCG            TTTTTTTTGCACATC 100 39
