Bphy_3139 PWY-5194 siroheme biosynthesis Bphy_3139 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Bphy_3141 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Bphy_3142 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Bphy_3143 PWY-6683 sulfate reduction III (assimilatory) Bphy_3146 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Bphy_3154 PWY-5194 siroheme biosynthesis Bphy_3154 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Bphy_3156 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Bphy_3156 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Bphy_3156 PWY-6268 adenosylcobalamin salvage from cobalamin Bphy_3156 PWY-6269 adenosylcobalamin salvage from cobinamide II Bphy_3158 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Bphy_3158 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Bphy_3173 PWY-6610 adenine and adenosine salvage IV Bphy_3178 PWY-5392 reductive TCA cycle II Bphy_3178 PWY-5537 pyruvate fermentation to acetate V Bphy_3178 PWY-5538 pyruvate fermentation to acetate VI Bphy_3178 PWY-5690 TCA cycle II (plants and fungi) Bphy_3178 PWY-5913 TCA cycle VI (obligate autotrophs) Bphy_3178 PWY-6728 methylaspartate cycle Bphy_3178 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bphy_3178 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Bphy_3185 PWY-6610 adenine and adenosine salvage IV Bphy_3197 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Bphy_3197 PWY-7494 choline degradation IV Bphy_3205 PWY-6216 3-chlorobenzoate degradation II (via protocatechuate) Bphy_3205 PWY-6217 3,4-dichlorobenzoate degradation Bphy_3235 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Bphy_3240 PWY-6168 flavin biosynthesis III (fungi) Bphy_3240 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Bphy_3254 PWY-6788 cellulose degradation II (fungi) Bphy_3256 PWY-1001 cellulose biosynthesis Bphy_3271 PWY-6936 seleno-amino acid biosynthesis Bphy_3271 PWY-7274 D-cycloserine biosynthesis Bphy_3284 PWY-1361 benzoyl-CoA degradation I (aerobic) Bphy_3284 PWY-3602 L-carnitine degradation II Bphy_3284 PWY-5109 2-methylbutanoate biosynthesis Bphy_3284 PWY-5136 fatty acid β-oxidation II (peroxisome) Bphy_3284 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Bphy_3284 PWY-5177 glutaryl-CoA degradation Bphy_3284 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Bphy_3284 PWY-6435 4-hydroxybenzoate biosynthesis V Bphy_3284 PWY-6583 pyruvate fermentation to butanol I Bphy_3284 PWY-6863 pyruvate fermentation to hexanol Bphy_3284 PWY-6883 pyruvate fermentation to butanol II Bphy_3284 PWY-6944 androstenedione degradation Bphy_3284 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Bphy_3284 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Bphy_3284 PWY-7007 methyl ketone biosynthesis Bphy_3284 PWY-7046 4-coumarate degradation (anaerobic) Bphy_3284 PWY-7094 fatty acid salvage Bphy_3284 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Bphy_3284 PWY-735 jasmonic acid biosynthesis Bphy_3284 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Bphy_3284 PWY-7472 D-carnitine degradation II Bphy_3292 PWY-2201 folate transformations I Bphy_3292 PWY-5497 purine nucleobases degradation II (anaerobic) Bphy_3302 PWY-7533 gliotoxin biosynthesis Bphy_3303 PWY-1622 formaldehyde assimilation I (serine pathway) Bphy_3303 PWY-181 photorespiration Bphy_3303 PWY-2161 folate polyglutamylation Bphy_3303 PWY-2201 folate transformations I Bphy_3303 PWY-3661 glycine betaine degradation I Bphy_3303 PWY-3661-1 glycine betaine degradation II (mammalian) Bphy_3303 PWY-3841 folate transformations II Bphy_3303 PWY-5497 purine nucleobases degradation II (anaerobic) Bphy_3305 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Bphy_3305 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Bphy_3305 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Bphy_3305 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Bphy_3305 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Bphy_3305 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Bphy_3305 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Bphy_3305 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Bphy_3309 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Bphy_3309 PWY-7494 choline degradation IV Bphy_3310 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Bphy_3310 PWY-7494 choline degradation IV Bphy_3329 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Bphy_3329 PWY-6148 tetrahydromethanopterin biosynthesis Bphy_3329 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Bphy_3329 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Bphy_3330 PWY-3661 glycine betaine degradation I Bphy_3330 PWY-4722 creatinine degradation II Bphy_3331 PWY-3661 glycine betaine degradation I Bphy_3331 PWY-4722 creatinine degradation II Bphy_3332 PWY-3661 glycine betaine degradation I Bphy_3332 PWY-4722 creatinine degradation II Bphy_3333 PWY-3661 glycine betaine degradation I Bphy_3333 PWY-4722 creatinine degradation II Bphy_3338 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Bphy_3342 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Bphy_3451 PWY-5101 L-isoleucine biosynthesis II Bphy_3451 PWY-5103 L-isoleucine biosynthesis III Bphy_3451 PWY-5104 L-isoleucine biosynthesis IV Bphy_3451 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bphy_3468 PWY-6713 L-rhamnose degradation II Bphy_3468 PWY-6714 L-rhamnose degradation III Bphy_3474 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Bphy_3510 PWY-5162 2-oxopentenoate degradation Bphy_3511 PWY-5162 2-oxopentenoate degradation Bphy_3511 PWY-5436 L-threonine degradation IV Bphy_3511 PWY-5480 pyruvate fermentation to ethanol I Bphy_3511 PWY-6587 pyruvate fermentation to ethanol III Bphy_3511 PWY-7085 triethylamine degradation Bphy_3511 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Bphy_3561 PWY-4381 fatty acid biosynthesis initiation I Bphy_3561 PWY-5743 3-hydroxypropanoate cycle Bphy_3561 PWY-5744 glyoxylate assimilation Bphy_3561 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Bphy_3561 PWY-6679 jadomycin biosynthesis Bphy_3561 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Bphy_3572 PWY-381 nitrate reduction II (assimilatory) Bphy_3572 PWY-5675 nitrate reduction V (assimilatory) Bphy_3572 PWY-6549 L-glutamine biosynthesis III Bphy_3572 PWY-6963 ammonia assimilation cycle I Bphy_3572 PWY-6964 ammonia assimilation cycle II Bphy_3578 PWY-1042 glycolysis IV (plant cytosol) Bphy_3578 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Bphy_3578 PWY-5484 glycolysis II (from fructose 6-phosphate) Bphy_3578 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Bphy_3578 PWY-7385 1,3-propanediol biosynthesis (engineered) Bphy_3612 PWY-6654 phosphopantothenate biosynthesis III Bphy_3614 PWY-6695 oxalate degradation II Bphy_3617 PWY-6695 oxalate degradation II Bphy_3618 PWY-6695 oxalate degradation II Bphy_3618 PWY-6696 oxalate degradation III Bphy_3648 PWY-3781 aerobic respiration I (cytochrome c) Bphy_3648 PWY-4521 arsenite oxidation I (respiratory) Bphy_3648 PWY-6692 Fe(II) oxidation Bphy_3648 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Bphy_3648 PWY-7544 pyruvate to cytochrome bo oxidase electron transfer Bphy_3665 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Bphy_3665 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Bphy_3665 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Bphy_3665 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Bphy_3669 PWY-6785 hydrogen production VIII Bphy_3685 PWY-1281 sulfoacetaldehyde degradation I Bphy_3685 PWY-5482 pyruvate fermentation to acetate II Bphy_3685 PWY-5485 pyruvate fermentation to acetate IV Bphy_3685 PWY-5497 purine nucleobases degradation II (anaerobic) Bphy_3685 PWY-6637 sulfolactate degradation II Bphy_3686 PWY-5482 pyruvate fermentation to acetate II Bphy_3686 PWY-5485 pyruvate fermentation to acetate IV Bphy_3686 PWY-5497 purine nucleobases degradation II (anaerobic) Bphy_3687 PWY-5971 palmitate biosynthesis II (bacteria and plants) Bphy_3687 PWY-5973 cis-vaccenate biosynthesis Bphy_3687 PWY-5989 stearate biosynthesis II (bacteria and plants) Bphy_3687 PWY-6113 superpathway of mycolate biosynthesis Bphy_3687 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Bphy_3687 PWY-6519 8-amino-7-oxononanoate biosynthesis I Bphy_3687 PWY-7096 triclosan resistance Bphy_3687 PWYG-321 mycolate biosynthesis Bphy_3694 PWY-5101 L-isoleucine biosynthesis II Bphy_3694 PWY-5103 L-isoleucine biosynthesis III Bphy_3694 PWY-5104 L-isoleucine biosynthesis IV Bphy_3694 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bphy_3697 PWY-5194 siroheme biosynthesis Bphy_3697 PWY-7377 cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) Bphy_3717 PWY-5381 pyridine nucleotide cycling (plants) Bphy_3724 PWY-6655 xanthan biosynthesis Bphy_3724 PWY-6658 acetan biosynthesis Bphy_3725 PWY-5659 GDP-mannose biosynthesis Bphy_3725 PWY-6073 alginate biosynthesis I (algal) Bphy_3725 PWY-6082 alginate biosynthesis II (bacterial) Bphy_3725 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Bphy_3740 PWY-101 photosynthesis light reactions Bphy_3740 PWY-7230 ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic) Bphy_3757 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Bphy_3757 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Bphy_3757 PWY-7382 lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast) Bphy_3761 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Bphy_3761 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Bphy_3761 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Bphy_3767 PWY-1361 benzoyl-CoA degradation I (aerobic) Bphy_3767 PWY-2361 3-oxoadipate degradation Bphy_3767 PWY-6185 4-methylcatechol degradation (ortho cleavage) Bphy_3770 PWY-5532 adenosine nucleotides degradation IV Bphy_3771 PWY-5532 adenosine nucleotides degradation IV Bphy_3773 PWY-7399 methylphosphonate degradation II Bphy_3776 PWY-7399 methylphosphonate degradation II Bphy_3778 PWY-7399 methylphosphonate degradation II Bphy_3779 PWY-7399 methylphosphonate degradation II Bphy_3786 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Bphy_3786 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Bphy_3786 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Bphy_3786 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Bphy_3790 PWY-5941 glycogen degradation II (eukaryotic) Bphy_3790 PWY-622 starch biosynthesis Bphy_3790 PWY-6731 starch degradation III Bphy_3790 PWY-6737 starch degradation V Bphy_3790 PWY-7238 sucrose biosynthesis II Bphy_3809 PWY-6967 methylamine degradation I Bphy_3812 PWY-6967 methylamine degradation I Bphy_3820 PWY-6832 2-aminoethylphosphonate degradation II Bphy_3821 PWY-5757 fosfomycin biosynthesis Bphy_3821 PWY-6322 phosphinothricin tripeptide biosynthesis Bphy_3821 PWY-6682 dehydrophos biosynthesis Bphy_3821 PWY-6839 2-aminoethylphosphonate biosynthesis Bphy_3821 PWY-7510 rhizocticin A and B biosynthesis Bphy_3822 PWY-5757 fosfomycin biosynthesis Bphy_3822 PWY-6322 phosphinothricin tripeptide biosynthesis Bphy_3822 PWY-6682 dehydrophos biosynthesis Bphy_3822 PWY-6839 2-aminoethylphosphonate biosynthesis Bphy_3822 PWY-7419 FR-900098 and FR-33289 antibiotics biosynthesis Bphy_3822 PWY-7510 rhizocticin A and B biosynthesis Bphy_3857 PWY-4041 γ-glutamyl cycle Bphy_3857 PWY-5826 hypoglycin biosynthesis Bphy_3919 PWY-5451 acetone degradation I (to methylglyoxal) Bphy_3919 PWY-6588 pyruvate fermentation to acetone Bphy_3919 PWY-6876 isopropanol biosynthesis Bphy_3919 PWY-7466 acetone degradation III (to propane-1,2-diol) Bphy_3920 PWY-6654 phosphopantothenate biosynthesis III Bphy_3947 PWY-5663 tetrahydrobiopterin biosynthesis I Bphy_3947 PWY-5664 tetrahydrobiopterin biosynthesis II Bphy_3947 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Bphy_3947 PWY-6703 preQ0 biosynthesis Bphy_3947 PWY-6983 tetrahydrobiopterin biosynthesis III Bphy_3947 PWY-7442 drosopterin and aurodrosopterin biosynthesis Bphy_3948 PWY-6891 thiazole biosynthesis II (Bacillus) Bphy_3948 PWY-6892 thiazole biosynthesis I (E. coli) Bphy_3948 PWY-7560 methylerythritol phosphate pathway II Bphy_3952 PWY-5350 thiosulfate disproportionation III (rhodanese) Bphy_3969 PWY-3781 aerobic respiration I (cytochrome c) Bphy_3969 PWY-4521 arsenite oxidation I (respiratory) Bphy_3969 PWY-6692 Fe(II) oxidation Bphy_3969 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Bphy_3969 PWY-7544 pyruvate to cytochrome bo oxidase electron transfer Bphy_3979 PWY-5169 cyanurate degradation Bphy_3979 PWY-5703 urea degradation I Bphy_3980 PWY-5169 cyanurate degradation Bphy_3980 PWY-5703 urea degradation I Bphy_3980 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Bphy_4001 PWY-5506 methanol oxidation to formaldehyde IV Bphy_4003 PWY-6454 vancomycin resistance I Bphy_4003 PWY-6455 vancomycin resistance II Bphy_4014 PWY-6215 4-chlorobenzoate degradation Bphy_4027 PWY-6185 4-methylcatechol degradation (ortho cleavage) Bphy_4107 PWY-4061 glutathione-mediated detoxification I Bphy_4107 PWY-6842 glutathione-mediated detoxification II Bphy_4107 PWY-7112 4-hydroxy-2-nonenal detoxification Bphy_4107 PWY-7533 gliotoxin biosynthesis Bphy_4110 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Bphy_4110 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Bphy_4110 PWY-6164 3-dehydroquinate biosynthesis I Bphy_4126 PWY-5152 leucodelphinidin biosynthesis Bphy_4130 PWY-7560 methylerythritol phosphate pathway II Bphy_4137 PWY-6098 diploterol and cycloartenol biosynthesis Bphy_4137 PWY-7072 hopanoid biosynthesis (bacteria) Bphy_4150 PWY-4202 arsenate detoxification I (glutaredoxin) Bphy_4150 PWY-4621 arsenate detoxification II (glutaredoxin) Bphy_4160 PWY-7378 aminopropanol phosphate biosynthesis II Bphy_4168 PWY-1801 formaldehyde oxidation II (glutathione-dependent) Bphy_4215 PWY-5101 L-isoleucine biosynthesis II Bphy_4215 PWY-5103 L-isoleucine biosynthesis III Bphy_4215 PWY-5104 L-isoleucine biosynthesis IV Bphy_4215 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bphy_4222 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Bphy_4253 PWY-6832 2-aminoethylphosphonate degradation II Bphy_4256 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bphy_4256 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bphy_4289 PWY-5392 reductive TCA cycle II Bphy_4289 PWY-5537 pyruvate fermentation to acetate V Bphy_4289 PWY-5538 pyruvate fermentation to acetate VI Bphy_4289 PWY-5690 TCA cycle II (plants and fungi) Bphy_4289 PWY-5913 TCA cycle VI (obligate autotrophs) Bphy_4289 PWY-6728 methylaspartate cycle Bphy_4289 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bphy_4289 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Bphy_4311 PWY-1361 benzoyl-CoA degradation I (aerobic) Bphy_4311 PWY-5109 2-methylbutanoate biosynthesis Bphy_4311 PWY-5136 fatty acid β-oxidation II (peroxisome) Bphy_4311 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Bphy_4311 PWY-5177 glutaryl-CoA degradation Bphy_4311 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Bphy_4311 PWY-6435 4-hydroxybenzoate biosynthesis V Bphy_4311 PWY-6583 pyruvate fermentation to butanol I Bphy_4311 PWY-6863 pyruvate fermentation to hexanol Bphy_4311 PWY-6883 pyruvate fermentation to butanol II Bphy_4311 PWY-6944 androstenedione degradation Bphy_4311 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Bphy_4311 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Bphy_4311 PWY-7007 methyl ketone biosynthesis Bphy_4311 PWY-7046 4-coumarate degradation (anaerobic) Bphy_4311 PWY-7094 fatty acid salvage Bphy_4311 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Bphy_4311 PWY-735 jasmonic acid biosynthesis Bphy_4311 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Bphy_4356 PWY-5747 2-methylcitrate cycle II Bphy_4358 PWY-1622 formaldehyde assimilation I (serine pathway) Bphy_4358 PWY-5392 reductive TCA cycle II Bphy_4358 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Bphy_4358 PWY-5690 TCA cycle II (plants and fungi) Bphy_4358 PWY-5913 TCA cycle VI (obligate autotrophs) Bphy_4358 PWY-6728 methylaspartate cycle Bphy_4358 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bphy_4358 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Bphy_4358 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Bphy_4363 PWY-3781 aerobic respiration I (cytochrome c) Bphy_4363 PWY-4302 aerobic respiration III (alternative oxidase pathway) Bphy_4363 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Bphy_4363 PWY-5690 TCA cycle II (plants and fungi) Bphy_4363 PWY-6728 methylaspartate cycle Bphy_4363 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bphy_4363 PWY-7254 TCA cycle VII (acetate-producers) Bphy_4363 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Bphy_4364 PWY-3781 aerobic respiration I (cytochrome c) Bphy_4364 PWY-4302 aerobic respiration III (alternative oxidase pathway) Bphy_4364 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Bphy_4364 PWY-5690 TCA cycle II (plants and fungi) Bphy_4364 PWY-6728 methylaspartate cycle Bphy_4364 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bphy_4364 PWY-7254 TCA cycle VII (acetate-producers) Bphy_4364 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Bphy_4369 PWY-7396 butanol and isobutanol biosynthesis (engineered) Bphy_4370 PWY-2941 L-lysine biosynthesis II Bphy_4370 PWY-2942 L-lysine biosynthesis III Bphy_4370 PWY-5097 L-lysine biosynthesis VI Bphy_4370 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Bphy_4370 PWY-6559 spermidine biosynthesis II Bphy_4370 PWY-6562 norspermidine biosynthesis Bphy_4370 PWY-7153 grixazone biosynthesis Bphy_4370 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Bphy_4377 PWY-4381 fatty acid biosynthesis initiation I Bphy_4377 PWY-5743 3-hydroxypropanoate cycle Bphy_4377 PWY-5744 glyoxylate assimilation Bphy_4377 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Bphy_4377 PWY-6679 jadomycin biosynthesis Bphy_4377 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Bphy_4378 PWY-2161 folate polyglutamylation Bphy_4381 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Bphy_4381 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Bphy_4381 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Bphy_4381 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Bphy_4387 PWY-2661 trehalose biosynthesis V Bphy_4388 PWY-5941 glycogen degradation II (eukaryotic) Bphy_4388 PWY-6724 starch degradation II Bphy_4388 PWY-6737 starch degradation V Bphy_4388 PWY-7238 sucrose biosynthesis II Bphy_4389 PWY-2661 trehalose biosynthesis V Bphy_4391 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Bphy_4391 PWY-622 starch biosynthesis Bphy_4392 PWY-2622 trehalose biosynthesis IV Bphy_4412 PWY-702 L-methionine biosynthesis II Bphy_4414 PWY-6617 adenosine nucleotides degradation III Bphy_4437 PWY-6157 autoinducer AI-1 biosynthesis Bphy_4447 PWY-5101 L-isoleucine biosynthesis II Bphy_4447 PWY-5103 L-isoleucine biosynthesis III Bphy_4447 PWY-5104 L-isoleucine biosynthesis IV Bphy_4447 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bphy_4454 PWY-5663 tetrahydrobiopterin biosynthesis I Bphy_4454 PWY-5664 tetrahydrobiopterin biosynthesis II Bphy_4454 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Bphy_4454 PWY-6703 preQ0 biosynthesis Bphy_4454 PWY-6983 tetrahydrobiopterin biosynthesis III Bphy_4454 PWY-7442 drosopterin and aurodrosopterin biosynthesis Bphy_4459 PWY-6123 inosine-5'-phosphate biosynthesis I Bphy_4459 PWY-6124 inosine-5'-phosphate biosynthesis II Bphy_4459 PWY-7219 adenosine ribonucleotides de novo biosynthesis Bphy_4459 PWY-7234 inosine-5'-phosphate biosynthesis III Bphy_4460 PWY-6185 4-methylcatechol degradation (ortho cleavage) Bphy_4478 PWY-5386 methylglyoxal degradation I Bphy_4479 PWY-7165 L-ascorbate biosynthesis VI (engineered pathway) Bphy_4498 PWY-6654 phosphopantothenate biosynthesis III Bphy_4535 PWY-6690 cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate Bphy_4536 PWY-6690 cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate Bphy_4537 PWY-5162 2-oxopentenoate degradation Bphy_4538 PWY-5162 2-oxopentenoate degradation Bphy_4538 PWY-5436 L-threonine degradation IV Bphy_4538 PWY-5480 pyruvate fermentation to ethanol I Bphy_4538 PWY-6587 pyruvate fermentation to ethanol III Bphy_4538 PWY-7085 triethylamine degradation Bphy_4538 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Bphy_4539 PWY-5162 2-oxopentenoate degradation Bphy_4541 PWY-6690 cinnamate and 3-hydroxycinnamate degradation to 2-oxopent-4-enoate Bphy_4543 PWY-4041 γ-glutamyl cycle Bphy_4543 PWY-5826 hypoglycin biosynthesis Bphy_4553 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Bphy_4569 PWY-5743 3-hydroxypropanoate cycle Bphy_4569 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Bphy_4569 PWY-6728 methylaspartate cycle Bphy_4569 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Bphy_4626 PWY-5022 4-aminobutanoate degradation V Bphy_4626 PWY-6728 methylaspartate cycle Bphy_4626 PWY-7126 ethylene biosynthesis IV Bphy_4627 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Bphy_4652 PWY-7180 2'-deoxy-α-D-ribose 1-phosphate degradation Bphy_4692 PWY-5392 reductive TCA cycle II Bphy_4692 PWY-5537 pyruvate fermentation to acetate V Bphy_4692 PWY-5538 pyruvate fermentation to acetate VI Bphy_4692 PWY-5690 TCA cycle II (plants and fungi) Bphy_4692 PWY-5913 TCA cycle VI (obligate autotrophs) Bphy_4692 PWY-6728 methylaspartate cycle Bphy_4692 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bphy_4692 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Bphy_4693 PWY-5392 reductive TCA cycle II Bphy_4693 PWY-5537 pyruvate fermentation to acetate V Bphy_4693 PWY-5538 pyruvate fermentation to acetate VI Bphy_4693 PWY-5690 TCA cycle II (plants and fungi) Bphy_4693 PWY-5913 TCA cycle VI (obligate autotrophs) Bphy_4693 PWY-6728 methylaspartate cycle Bphy_4693 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bphy_4693 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Bphy_4694 PWY-6695 oxalate degradation II Bphy_4713 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) Bphy_4713 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Bphy_4730 PWY-5686 UMP biosynthesis Bphy_4731 PWY-2941 L-lysine biosynthesis II Bphy_4731 PWY-2942 L-lysine biosynthesis III Bphy_4731 PWY-5097 L-lysine biosynthesis VI Bphy_4736 PWY-5350 thiosulfate disproportionation III (rhodanese) Bphy_4793 PWY-3781 aerobic respiration I (cytochrome c) Bphy_4793 PWY-4521 arsenite oxidation I (respiratory) Bphy_4793 PWY-6692 Fe(II) oxidation Bphy_4793 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Bphy_4837 PWY-723 alkylnitronates degradation Bphy_4842 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Bphy_4863 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bphy_4863 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bphy_4867 PWY-3722 glycine betaine biosynthesis II (Gram-positive bacteria) Bphy_4867 PWY-7494 choline degradation IV Bphy_4929 PWY-5642 2,4-dinitrotoluene degradation Bphy_4929 PWY-6373 acrylate degradation Bphy_4991 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bphy_4991 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bphy_4993 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bphy_4993 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bphy_5007 PWY-5101 L-isoleucine biosynthesis II Bphy_5007 PWY-5103 L-isoleucine biosynthesis III Bphy_5007 PWY-5104 L-isoleucine biosynthesis IV Bphy_5007 PWY-5938 (R)-acetoin biosynthesis I Bphy_5007 PWY-5939 (R)-acetoin biosynthesis II Bphy_5007 PWY-6389 (S)-acetoin biosynthesis Bphy_5007 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bphy_5008 PWY-6891 thiazole biosynthesis II (Bacillus) Bphy_5008 PWY-6892 thiazole biosynthesis I (E. coli) Bphy_5008 PWY-7560 methylerythritol phosphate pathway II Bphy_5037 PWY-5101 L-isoleucine biosynthesis II Bphy_5037 PWY-5103 L-isoleucine biosynthesis III Bphy_5037 PWY-5104 L-isoleucine biosynthesis IV Bphy_5037 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bphy_5064 PWY-6832 2-aminoethylphosphonate degradation II Bphy_5081 PWY-4381 fatty acid biosynthesis initiation I Bphy_5081 PWY-6799 fatty acid biosynthesis (plant mitochondria) Bphy_5081 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Bphy_5082 PWY-5796 malonate decarboxylase activation Bphy_5083 PWY-6060 malonate degradation II (biotin-dependent) Bphy_5084 PWY-4381 fatty acid biosynthesis initiation I Bphy_5084 PWY-5743 3-hydroxypropanoate cycle Bphy_5084 PWY-5744 glyoxylate assimilation Bphy_5084 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Bphy_5084 PWY-6060 malonate degradation II (biotin-dependent) Bphy_5084 PWY-6679 jadomycin biosynthesis Bphy_5084 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Bphy_5086 PWY-5796 malonate decarboxylase activation Bphy_5087 PWY-5794 malonate degradation I (biotin-independent) Bphy_5087 PWY-6060 malonate degradation II (biotin-dependent) Bphy_5093 PWY-7153 grixazone biosynthesis Bphy_5094 PWY-6825 phosphatidylcholine biosynthesis V Bphy_5112 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bphy_5112 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bphy_5128 PWY-5642 2,4-dinitrotoluene degradation Bphy_5128 PWY-6373 acrylate degradation Bphy_5144 PWY-5344 L-homocysteine biosynthesis Bphy_5194 PWY-6840 homoglutathione biosynthesis Bphy_5194 PWY-7255 ergothioneine biosynthesis I (bacteria) Bphy_5206 PWY-5941 glycogen degradation II (eukaryotic) Bphy_5206 PWY-6724 starch degradation II Bphy_5206 PWY-6737 starch degradation V Bphy_5206 PWY-7238 sucrose biosynthesis II Bphy_5233 PWY-5331 taurine biosynthesis Bphy_5255 PWY-5669 phosphatidylethanolamine biosynthesis I Bphy_5336 PWY-622 starch biosynthesis Bphy_5339 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bphy_5339 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bphy_5365 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Bphy_5365 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Bphy_5385 PWY-5101 L-isoleucine biosynthesis II Bphy_5385 PWY-5103 L-isoleucine biosynthesis III Bphy_5385 PWY-5104 L-isoleucine biosynthesis IV Bphy_5385 PWY-7111 pyruvate fermentation to isobutanol (engineered) Bphy_5412 PWY-3561 choline biosynthesis III Bphy_5412 PWY-7039 phosphatidate metabolism, as a signaling molecule Bphy_5434 PWY-3121 linamarin degradation Bphy_5434 PWY-5176 coumarin biosynthesis (via 2-coumarate) Bphy_5434 PWY-6002 lotaustralin degradation Bphy_5434 PWY-6788 cellulose degradation II (fungi) Bphy_5434 PWY-7089 taxiphyllin bioactivation Bphy_5434 PWY-7091 linustatin bioactivation Bphy_5434 PWY-7092 neolinustatin bioactivation Bphy_5444 PWY-5913 TCA cycle VI (obligate autotrophs) Bphy_5444 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Bphy_5444 PWY-6638 sulfolactate degradation III Bphy_5444 PWY-6642 (R)-cysteate degradation Bphy_5444 PWY-6643 coenzyme M biosynthesis II Bphy_5444 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Bphy_5444 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Bphy_5444 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Bphy_5446 PWY-6654 phosphopantothenate biosynthesis III Bphy_5456 PWY-5913 TCA cycle VI (obligate autotrophs) Bphy_5456 PWY-6549 L-glutamine biosynthesis III Bphy_5456 PWY-6728 methylaspartate cycle Bphy_5456 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Bphy_5456 PWY-7124 ethylene biosynthesis V (engineered) Bphy_5456 PWY-7254 TCA cycle VII (acetate-producers) Bphy_5456 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Bphy_5467 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Bphy_5470 PWY-5041 S-adenosyl-L-methionine cycle II Bphy_5470 PWY-6151 S-adenosyl-L-methionine cycle I Bphy_5470 PWY-6936 seleno-amino acid biosynthesis Bphy_5470 PWY-702 L-methionine biosynthesis II Bphy_5474 PWY-1723 formaldehyde oxidation V (H4MPT pathway) Bphy_5474 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Bphy_5482 PWY-6936 seleno-amino acid biosynthesis Bphy_5484 PWY-5506 methanol oxidation to formaldehyde IV Bphy_5490 PWY-3781 aerobic respiration I (cytochrome c) Bphy_5490 PWY-4521 arsenite oxidation I (respiratory) Bphy_5490 PWY-6692 Fe(II) oxidation Bphy_5490 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Bphy_5499 PWY-4983 L-citrulline-nitric oxide cycle Bphy_5499 PWY-4984 urea cycle Bphy_5499 PWY-5 canavanine biosynthesis Bphy_5499 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Bphy_5499 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Bphy_5526 PWY-5451 acetone degradation I (to methylglyoxal) Bphy_5526 PWY-6588 pyruvate fermentation to acetone Bphy_5526 PWY-6876 isopropanol biosynthesis Bphy_5526 PWY-7466 acetone degradation III (to propane-1,2-diol)