Calni_0007 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate Calni_0007 PWY-2201 folate transformations I Calni_0007 PWY-3841 folate transformations II Calni_0007 PWY-5030 L-histidine degradation III Calni_0007 PWY-5497 purine nucleobases degradation II (anaerobic) Calni_0007 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Calni_0047 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Calni_0047 PWY-5686 UMP biosynthesis Calni_0047 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Calni_0050 PWY-4381 fatty acid biosynthesis initiation I Calni_0050 PWY-5743 3-hydroxypropanoate cycle Calni_0050 PWY-5744 glyoxylate assimilation Calni_0050 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Calni_0050 PWY-6679 jadomycin biosynthesis Calni_0050 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Calni_0051 PWY-2161 folate polyglutamylation Calni_0061 PWY-6123 inosine-5'-phosphate biosynthesis I Calni_0061 PWY-6124 inosine-5'-phosphate biosynthesis II Calni_0061 PWY-7219 adenosine ribonucleotides de novo biosynthesis Calni_0061 PWY-7234 inosine-5'-phosphate biosynthesis III Calni_0065 PWY-1281 sulfoacetaldehyde degradation I Calni_0065 PWY-5482 pyruvate fermentation to acetate II Calni_0065 PWY-5485 pyruvate fermentation to acetate IV Calni_0065 PWY-5497 purine nucleobases degradation II (anaerobic) Calni_0065 PWY-6637 sulfolactate degradation II Calni_0083 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation Calni_0088 PWY-3461 L-tyrosine biosynthesis II Calni_0088 PWY-3462 L-phenylalanine biosynthesis II Calni_0088 PWY-6120 L-tyrosine biosynthesis III Calni_0088 PWY-6627 salinosporamide A biosynthesis Calni_0088 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) Calni_0090 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Calni_0090 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Calni_0090 PWY-6164 3-dehydroquinate biosynthesis I Calni_0091 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis Calni_0092 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Calni_0093 PWY-7205 CMP phosphorylation Calni_0094 PWY-7560 methylerythritol phosphate pathway II Calni_0108 PWY-6910 hydroxymethylpyrimidine salvage Calni_0108 PWY-7356 thiamin salvage IV (yeast) Calni_0108 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Calni_0129 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_0129 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_0134 PWY-7221 guanosine ribonucleotides de novo biosynthesis Calni_0135 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Calni_0135 PWY-6596 adenosine nucleotides degradation I Calni_0135 PWY-7221 guanosine ribonucleotides de novo biosynthesis Calni_0166 PWY-3821 galactose degradation III Calni_0166 PWY-6317 galactose degradation I (Leloir pathway) Calni_0166 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis Calni_0166 PWY-6527 stachyose degradation Calni_0166 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis Calni_0166 PWY-7344 UDP-D-galactose biosynthesis Calni_0182 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Calni_0182 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Calni_0201 PWY-6654 phosphopantothenate biosynthesis III Calni_0227 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Calni_0228 PWY-6164 3-dehydroquinate biosynthesis I Calni_0231 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Calni_0231 PWY-6416 quinate degradation II Calni_0231 PWY-6707 gallate biosynthesis Calni_0238 PWY-7560 methylerythritol phosphate pathway II Calni_0247 PWY-2201 folate transformations I Calni_0247 PWY-3841 folate transformations II Calni_0248 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Calni_0255 PWY-4983 L-citrulline-nitric oxide cycle Calni_0255 PWY-4984 urea cycle Calni_0255 PWY-5 canavanine biosynthesis Calni_0255 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Calni_0255 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Calni_0262 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Calni_0262 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Calni_0275 PWY-6891 thiazole biosynthesis II (Bacillus) Calni_0275 PWY-6892 thiazole biosynthesis I (E. coli) Calni_0275 PWY-7560 methylerythritol phosphate pathway II Calni_0277 PWY-5083 NAD/NADH phosphorylation and dephosphorylation Calni_0277 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Calni_0277 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) Calni_0292 PWY-7219 adenosine ribonucleotides de novo biosynthesis Calni_0294 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Calni_0298 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_0298 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_0303 PWY-5971 palmitate biosynthesis II (bacteria and plants) Calni_0303 PWY-5973 cis-vaccenate biosynthesis Calni_0303 PWY-5989 stearate biosynthesis II (bacteria and plants) Calni_0303 PWY-5994 palmitate biosynthesis I (animals and fungi) Calni_0303 PWY-6113 superpathway of mycolate biosynthesis Calni_0303 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Calni_0303 PWY-6519 8-amino-7-oxononanoate biosynthesis I Calni_0303 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Calni_0303 PWYG-321 mycolate biosynthesis Calni_0336 PWY-5316 nicotine biosynthesis Calni_0336 PWY-7342 superpathway of nicotine biosynthesis Calni_0348 PWY-723 alkylnitronates degradation Calni_0350 PWY-1361 benzoyl-CoA degradation I (aerobic) Calni_0350 PWY-5109 2-methylbutanoate biosynthesis Calni_0350 PWY-5136 fatty acid β-oxidation II (peroxisome) Calni_0350 PWY-5138 unsaturated, even numbered fatty acid β-oxidation Calni_0350 PWY-5177 glutaryl-CoA degradation Calni_0350 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Calni_0350 PWY-6435 4-hydroxybenzoate biosynthesis V Calni_0350 PWY-6583 pyruvate fermentation to butanol I Calni_0350 PWY-6863 pyruvate fermentation to hexanol Calni_0350 PWY-6883 pyruvate fermentation to butanol II Calni_0350 PWY-6944 androstenedione degradation Calni_0350 PWY-6945 cholesterol degradation to androstenedione I (cholesterol oxidase) Calni_0350 PWY-6946 cholesterol degradation to androstenedione II (cholesterol dehydrogenase) Calni_0350 PWY-7007 methyl ketone biosynthesis Calni_0350 PWY-7046 4-coumarate degradation (anaerobic) Calni_0350 PWY-7094 fatty acid salvage Calni_0350 PWY-7216 (R)- and (S)-3-hydroxybutanoate biosynthesis Calni_0350 PWY-735 jasmonic acid biosynthesis Calni_0350 PWY-7401 crotonate fermentation (to acetate and cyclohexane carboxylate) Calni_0353 PWY-5392 reductive TCA cycle II Calni_0353 PWY-5537 pyruvate fermentation to acetate V Calni_0353 PWY-5538 pyruvate fermentation to acetate VI Calni_0353 PWY-5690 TCA cycle II (plants and fungi) Calni_0353 PWY-5913 TCA cycle VI (obligate autotrophs) Calni_0353 PWY-6728 methylaspartate cycle Calni_0353 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Calni_0353 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Calni_0354 PWY-5392 reductive TCA cycle II Calni_0354 PWY-5537 pyruvate fermentation to acetate V Calni_0354 PWY-5538 pyruvate fermentation to acetate VI Calni_0354 PWY-5690 TCA cycle II (plants and fungi) Calni_0354 PWY-5913 TCA cycle VI (obligate autotrophs) Calni_0354 PWY-6728 methylaspartate cycle Calni_0354 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Calni_0354 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Calni_0373 PWY-6832 2-aminoethylphosphonate degradation II Calni_0375 PWY-7219 adenosine ribonucleotides de novo biosynthesis Calni_0380 PWY-5392 reductive TCA cycle II Calni_0380 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Calni_0380 PWY-5690 TCA cycle II (plants and fungi) Calni_0380 PWY-5913 TCA cycle VI (obligate autotrophs) Calni_0380 PWY-6728 methylaspartate cycle Calni_0380 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Calni_0380 PWY-7254 TCA cycle VII (acetate-producers) Calni_0380 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Calni_0405 PWY-5663 tetrahydrobiopterin biosynthesis I Calni_0405 PWY-5664 tetrahydrobiopterin biosynthesis II Calni_0405 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Calni_0405 PWY-6703 preQ0 biosynthesis Calni_0405 PWY-6983 tetrahydrobiopterin biosynthesis III Calni_0405 PWY-7442 drosopterin and aurodrosopterin biosynthesis Calni_0409 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Calni_0410 PWY-6749 CMP-legionaminate biosynthesis I Calni_0419 PWY-6891 thiazole biosynthesis II (Bacillus) Calni_0419 PWY-6892 thiazole biosynthesis I (E. coli) Calni_0419 PWY-7560 methylerythritol phosphate pathway II Calni_0436 PWY-6936 seleno-amino acid biosynthesis Calni_0437 PWY-5344 L-homocysteine biosynthesis Calni_0437 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Calni_0462 PWY-5913 TCA cycle VI (obligate autotrophs) Calni_0462 PWY-6549 L-glutamine biosynthesis III Calni_0462 PWY-6728 methylaspartate cycle Calni_0462 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Calni_0462 PWY-7124 ethylene biosynthesis V (engineered) Calni_0462 PWY-7254 TCA cycle VII (acetate-producers) Calni_0462 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) Calni_0463 PWY-1622 formaldehyde assimilation I (serine pathway) Calni_0463 PWY-5392 reductive TCA cycle II Calni_0463 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Calni_0463 PWY-5690 TCA cycle II (plants and fungi) Calni_0463 PWY-5913 TCA cycle VI (obligate autotrophs) Calni_0463 PWY-6728 methylaspartate cycle Calni_0463 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Calni_0463 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Calni_0463 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Calni_0475 PWY-5523 5,6-dimethylbenzimidazole biosynthesis Calni_0475 PWY-6167 flavin biosynthesis II (archaea) Calni_0475 PWY-6168 flavin biosynthesis III (fungi) Calni_0478 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Calni_0484 PWY-5674 nitrate reduction IV (dissimilatory) Calni_0488 PWY-6892 thiazole biosynthesis I (E. coli) Calni_0488 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Calni_0489 PWY-6891 thiazole biosynthesis II (Bacillus) Calni_0489 PWY-6892 thiazole biosynthesis I (E. coli) Calni_0490 PWY-6871 3-methylbutanol biosynthesis Calni_0491 PWY-5669 phosphatidylethanolamine biosynthesis I Calni_0492 PWY-5669 phosphatidylethanolamine biosynthesis I Calni_0495 PWY-5750 itaconate biosynthesis Calni_0495 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_0495 PWY-6146 Methanobacterium thermoautotrophicum biosynthetic metabolism Calni_0513 PWY-5964 guanylyl molybdenum cofactor biosynthesis Calni_0514 PWY-2941 L-lysine biosynthesis II Calni_0514 PWY-2942 L-lysine biosynthesis III Calni_0514 PWY-5097 L-lysine biosynthesis VI Calni_0564 PWY-4381 fatty acid biosynthesis initiation I Calni_0564 PWY-5743 3-hydroxypropanoate cycle Calni_0564 PWY-5744 glyoxylate assimilation Calni_0564 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Calni_0564 PWY-6679 jadomycin biosynthesis Calni_0564 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Calni_0567 PWY-5743 3-hydroxypropanoate cycle Calni_0567 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Calni_0567 PWY-6728 methylaspartate cycle Calni_0567 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Calni_0569 PWY-5041 S-adenosyl-L-methionine cycle II Calni_0582 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Calni_0591 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Calni_0592 PWY-1622 formaldehyde assimilation I (serine pathway) Calni_0592 PWY-181 photorespiration Calni_0592 PWY-2161 folate polyglutamylation Calni_0592 PWY-2201 folate transformations I Calni_0592 PWY-3661 glycine betaine degradation I Calni_0592 PWY-3661-1 glycine betaine degradation II (mammalian) Calni_0592 PWY-3841 folate transformations II Calni_0592 PWY-5497 purine nucleobases degradation II (anaerobic) Calni_0601 PWY-6123 inosine-5'-phosphate biosynthesis I Calni_0601 PWY-6124 inosine-5'-phosphate biosynthesis II Calni_0601 PWY-7234 inosine-5'-phosphate biosynthesis III Calni_0607 PWY-6654 phosphopantothenate biosynthesis III Calni_0614 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Calni_0614 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Calni_0614 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Calni_0614 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Calni_0614 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Calni_0614 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Calni_0614 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Calni_0614 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Calni_0617 PWY-6936 seleno-amino acid biosynthesis Calni_0617 PWY-7274 D-cycloserine biosynthesis Calni_0619 PWY-6823 molybdenum cofactor biosynthesis Calni_0619 PWY-6891 thiazole biosynthesis II (Bacillus) Calni_0619 PWY-6892 thiazole biosynthesis I (E. coli) Calni_0619 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Calni_0633 PWY-5381 pyridine nucleotide cycling (plants) Calni_0633 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation Calni_0633 PWY-6596 adenosine nucleotides degradation I Calni_0633 PWY-6606 guanosine nucleotides degradation II Calni_0633 PWY-6607 guanosine nucleotides degradation I Calni_0633 PWY-6608 guanosine nucleotides degradation III Calni_0633 PWY-7185 UTP and CTP dephosphorylation I Calni_0659 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Calni_0659 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Calni_0659 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Calni_0660 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Calni_0660 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate Calni_0672 PWY-6871 3-methylbutanol biosynthesis Calni_0673 PWY-6823 molybdenum cofactor biosynthesis Calni_0704 PWY-6823 molybdenum cofactor biosynthesis Calni_0709 PWY-6143 CMP-pseudaminate biosynthesis Calni_0709 PWY-7330 UDP-N-acetyl-β-L-fucosamine biosynthesis Calni_0709 PWY-7331 UDP-N-acetyl-β-L-quinovosamine biosynthesis Calni_0709 PWY-7332 superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis Calni_0711 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Calni_0711 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Calni_0714 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Calni_0714 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Calni_0714 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Calni_0714 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Calni_0715 PWY-6164 3-dehydroquinate biosynthesis I Calni_0723 PWY-6143 CMP-pseudaminate biosynthesis Calni_0731 PWY-5022 4-aminobutanoate degradation V Calni_0731 PWY-6728 methylaspartate cycle Calni_0731 PWY-7126 ethylene biosynthesis IV Calni_0742 PWY-4981 L-proline biosynthesis II (from arginine) Calni_0742 PWY-4984 urea cycle Calni_0742 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Calni_0743 PWY-4983 L-citrulline-nitric oxide cycle Calni_0743 PWY-4984 urea cycle Calni_0743 PWY-5 canavanine biosynthesis Calni_0743 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Calni_0743 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Calni_0746 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Calni_0746 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Calni_0748 PWY-7560 methylerythritol phosphate pathway II Calni_0752 PWY-6829 tRNA methylation (yeast) Calni_0755 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Calni_0755 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Calni_0755 PWY-6896 thiamin salvage I Calni_0755 PWY-6897 thiamin salvage II Calni_0756 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Calni_0756 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Calni_0756 PWY-6897 thiamin salvage II Calni_0756 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Calni_0756 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Calni_0756 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Calni_0756 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Calni_0757 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis Calni_0758 PWY-5101 L-isoleucine biosynthesis II Calni_0758 PWY-5103 L-isoleucine biosynthesis III Calni_0758 PWY-5104 L-isoleucine biosynthesis IV Calni_0758 PWY-7111 pyruvate fermentation to isobutanol (engineered) Calni_0765 PWY-5482 pyruvate fermentation to acetate II Calni_0765 PWY-5485 pyruvate fermentation to acetate IV Calni_0765 PWY-5497 purine nucleobases degradation II (anaerobic) Calni_0766 PWY-1281 sulfoacetaldehyde degradation I Calni_0766 PWY-5482 pyruvate fermentation to acetate II Calni_0766 PWY-5485 pyruvate fermentation to acetate IV Calni_0766 PWY-5497 purine nucleobases degradation II (anaerobic) Calni_0766 PWY-6637 sulfolactate degradation II Calni_0775 PWY-5482 pyruvate fermentation to acetate II Calni_0775 PWY-5485 pyruvate fermentation to acetate IV Calni_0775 PWY-5497 purine nucleobases degradation II (anaerobic) Calni_0776 PWY-1281 sulfoacetaldehyde degradation I Calni_0776 PWY-5482 pyruvate fermentation to acetate II Calni_0776 PWY-5485 pyruvate fermentation to acetate IV Calni_0776 PWY-5497 purine nucleobases degradation II (anaerobic) Calni_0776 PWY-6637 sulfolactate degradation II Calni_0805 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) Calni_0818 PWY-3781 aerobic respiration I (cytochrome c) Calni_0818 PWY-4521 arsenite oxidation I (respiratory) Calni_0818 PWY-6692 Fe(II) oxidation Calni_0818 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Calni_0819 PWY-3781 aerobic respiration I (cytochrome c) Calni_0819 PWY-4521 arsenite oxidation I (respiratory) Calni_0819 PWY-6692 Fe(II) oxidation Calni_0819 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Calni_0829 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Calni_0829 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Calni_0830 PWY-5101 L-isoleucine biosynthesis II Calni_0830 PWY-5103 L-isoleucine biosynthesis III Calni_0830 PWY-5104 L-isoleucine biosynthesis IV Calni_0830 PWY-7111 pyruvate fermentation to isobutanol (engineered) Calni_0831 PWY-5101 L-isoleucine biosynthesis II Calni_0831 PWY-5103 L-isoleucine biosynthesis III Calni_0831 PWY-5104 L-isoleucine biosynthesis IV Calni_0831 PWY-5938 (R)-acetoin biosynthesis I Calni_0831 PWY-5939 (R)-acetoin biosynthesis II Calni_0831 PWY-6389 (S)-acetoin biosynthesis Calni_0831 PWY-7111 pyruvate fermentation to isobutanol (engineered) Calni_0832 PWY-5101 L-isoleucine biosynthesis II Calni_0832 PWY-5103 L-isoleucine biosynthesis III Calni_0832 PWY-5104 L-isoleucine biosynthesis IV Calni_0832 PWY-5938 (R)-acetoin biosynthesis I Calni_0832 PWY-5939 (R)-acetoin biosynthesis II Calni_0832 PWY-6389 (S)-acetoin biosynthesis Calni_0832 PWY-7111 pyruvate fermentation to isobutanol (engineered) Calni_0868 PWY-1042 glycolysis IV (plant cytosol) Calni_0868 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Calni_0868 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_0868 PWY-5723 Rubisco shunt Calni_0868 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_0868 PWY-6886 1-butanol autotrophic biosynthesis Calni_0868 PWY-6901 superpathway of glucose and xylose degradation Calni_0868 PWY-7003 glycerol degradation to butanol Calni_0868 PWY-7124 ethylene biosynthesis V (engineered) Calni_0868 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Calni_0869 PWY-2941 L-lysine biosynthesis II Calni_0869 PWY-2942 L-lysine biosynthesis III Calni_0869 PWY-5097 L-lysine biosynthesis VI Calni_0869 PWY-6559 spermidine biosynthesis II Calni_0869 PWY-6562 norspermidine biosynthesis Calni_0869 PWY-7153 grixazone biosynthesis Calni_0870 PWY-5101 L-isoleucine biosynthesis II Calni_0870 PWY-6871 3-methylbutanol biosynthesis Calni_0873 PWY-7205 CMP phosphorylation Calni_0874 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Calni_0874 PWY-6148 tetrahydromethanopterin biosynthesis Calni_0874 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) Calni_0874 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Calni_0876 PWY-5041 S-adenosyl-L-methionine cycle II Calni_0876 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis Calni_0884 PWY-5737 (5R)-carbapenem carboxylate biosynthesis Calni_0884 PWY-6922 L-Nδ-acetylornithine biosynthesis Calni_0885 PWY-6853 ethylene biosynthesis II (microbes) Calni_0887 PWY-6562 norspermidine biosynthesis Calni_0889 PWY-1341 phenylacetate degradation II (anaerobic) Calni_0889 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Calni_0897 PWY-1341 phenylacetate degradation II (anaerobic) Calni_0897 PWY-6318 L-phenylalanine degradation IV (mammalian, via side chain) Calni_0901 PWY-5686 UMP biosynthesis Calni_0902 PWY-5686 UMP biosynthesis Calni_0903 PWY-7183 pyrimidine nucleobases salvage I Calni_0907 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Calni_0912 PWY-6825 phosphatidylcholine biosynthesis V Calni_0915 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Calni_0915 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Calni_0915 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Calni_0915 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation Calni_0918 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Calni_0918 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Calni_0918 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Calni_0918 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Calni_0918 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Calni_0918 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Calni_0959 PWY-5667 CDP-diacylglycerol biosynthesis I Calni_0959 PWY-5981 CDP-diacylglycerol biosynthesis III Calni_0961 PWY-5057 L-valine degradation II Calni_0961 PWY-5076 L-leucine degradation III Calni_0961 PWY-5078 L-isoleucine degradation II Calni_0961 PWY-5101 L-isoleucine biosynthesis II Calni_0961 PWY-5103 L-isoleucine biosynthesis III Calni_0961 PWY-5104 L-isoleucine biosynthesis IV Calni_0961 PWY-5108 L-isoleucine biosynthesis V Calni_0964 PWY-7039 phosphatidate metabolism, as a signaling molecule Calni_0977 PWY-5958 acridone alkaloid biosynthesis Calni_0977 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Calni_0977 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Calni_0978 PWY-5958 acridone alkaloid biosynthesis Calni_0978 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Calni_0978 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Calni_0986 PWY-5747 2-methylcitrate cycle II Calni_0987 PWY-5392 reductive TCA cycle II Calni_0987 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Calni_0987 PWY-5690 TCA cycle II (plants and fungi) Calni_0987 PWY-5913 TCA cycle VI (obligate autotrophs) Calni_0987 PWY-6728 methylaspartate cycle Calni_0987 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Calni_0987 PWY-7254 TCA cycle VII (acetate-producers) Calni_0987 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Calni_0988 PWY-5686 UMP biosynthesis Calni_0989 PWY-5686 UMP biosynthesis Calni_0991 PWY-6749 CMP-legionaminate biosynthesis I Calni_0992 PWY-5941 glycogen degradation II (eukaryotic) Calni_0992 PWY-622 starch biosynthesis Calni_0992 PWY-6731 starch degradation III Calni_0992 PWY-6737 starch degradation V Calni_0992 PWY-7238 sucrose biosynthesis II Calni_0996 PWY-2941 L-lysine biosynthesis II Calni_0996 PWY-2942 L-lysine biosynthesis III Calni_0996 PWY-5097 L-lysine biosynthesis VI Calni_0996 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Calni_0996 PWY-6559 spermidine biosynthesis II Calni_0996 PWY-6562 norspermidine biosynthesis Calni_0996 PWY-7153 grixazone biosynthesis Calni_0996 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Calni_0997 PWY-5971 palmitate biosynthesis II (bacteria and plants) Calni_0997 PWY-5973 cis-vaccenate biosynthesis Calni_0997 PWY-5989 stearate biosynthesis II (bacteria and plants) Calni_0997 PWY-6113 superpathway of mycolate biosynthesis Calni_0997 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Calni_0997 PWY-6519 8-amino-7-oxononanoate biosynthesis I Calni_0997 PWY-7096 triclosan resistance Calni_0997 PWYG-321 mycolate biosynthesis Calni_1006 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Calni_1006 PWY-5686 UMP biosynthesis Calni_1006 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Calni_1016 PWY-7221 guanosine ribonucleotides de novo biosynthesis Calni_1022 PWY-1281 sulfoacetaldehyde degradation I Calni_1022 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Calni_1022 PWY-5482 pyruvate fermentation to acetate II Calni_1022 PWY-5485 pyruvate fermentation to acetate IV Calni_1022 PWY-5497 purine nucleobases degradation II (anaerobic) Calni_1022 PWY-6637 sulfolactate degradation II Calni_1022 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Calni_1031 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Calni_1031 PWY-5723 Rubisco shunt Calni_1046 PWY-5743 3-hydroxypropanoate cycle Calni_1046 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Calni_1046 PWY-6728 methylaspartate cycle Calni_1046 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) Calni_1049 PWY-6519 8-amino-7-oxononanoate biosynthesis I Calni_1055 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Calni_1055 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Calni_1055 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Calni_1055 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) Calni_1056 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Calni_1056 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Calni_1056 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Calni_1057 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Calni_1057 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Calni_1057 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Calni_1058 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Calni_1058 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Calni_1058 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Calni_1059 PWY-5988 wound-induced proteolysis I Calni_1059 PWY-6018 seed germination protein turnover Calni_1063 PWY-6823 molybdenum cofactor biosynthesis Calni_1067 PWY-4381 fatty acid biosynthesis initiation I Calni_1067 PWY-5743 3-hydroxypropanoate cycle Calni_1067 PWY-5744 glyoxylate assimilation Calni_1067 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle Calni_1067 PWY-6679 jadomycin biosynthesis Calni_1067 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Calni_1069 PWY-2781 cis-zeatin biosynthesis Calni_1079 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I Calni_1079 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II Calni_1079 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis Calni_1080 PWY-6123 inosine-5'-phosphate biosynthesis I Calni_1080 PWY-6124 inosine-5'-phosphate biosynthesis II Calni_1080 PWY-7234 inosine-5'-phosphate biosynthesis III Calni_1088 PWY-40 putrescine biosynthesis I Calni_1088 PWY-43 putrescine biosynthesis II Calni_1088 PWY-6305 putrescine biosynthesis IV Calni_1088 PWY-6834 spermidine biosynthesis III Calni_1090 PWY-5274 sulfide oxidation II (sulfide dehydrogenase) Calni_1095 PWY-7560 methylerythritol phosphate pathway II Calni_1098 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Calni_1112 PWY-5269 cardiolipin biosynthesis II Calni_1112 PWY-5668 cardiolipin biosynthesis I Calni_1116 PWY-5155 β-alanine biosynthesis III Calni_1118 PWY-6654 phosphopantothenate biosynthesis III Calni_1122 PWY-1042 glycolysis IV (plant cytosol) Calni_1122 PWY-1622 formaldehyde assimilation I (serine pathway) Calni_1122 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Calni_1122 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1122 PWY-5723 Rubisco shunt Calni_1122 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_1122 PWY-6886 1-butanol autotrophic biosynthesis Calni_1122 PWY-6901 superpathway of glucose and xylose degradation Calni_1122 PWY-7003 glycerol degradation to butanol Calni_1122 PWY-7124 ethylene biosynthesis V (engineered) Calni_1122 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Calni_1125 PWY-5316 nicotine biosynthesis Calni_1125 PWY-7342 superpathway of nicotine biosynthesis Calni_1131 PWY-7560 methylerythritol phosphate pathway II Calni_1143 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Calni_1143 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Calni_1143 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Calni_1163 PWY-5833 CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis Calni_1164 PWY-5833 CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis Calni_1164 PWY-5940 streptomycin biosynthesis Calni_1166 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Calni_1168 PWY-5738 GDP-6-deoxy-D-talose biosynthesis Calni_1168 PWY-5739 GDP-D-perosamine biosynthesis Calni_1168 PWY-5740 GDP-L-colitose biosynthesis Calni_1168 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Calni_1178 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Calni_1180 PWY-3221 dTDP-L-rhamnose biosynthesis II Calni_1180 PWY-6808 dTDP-D-forosamine biosynthesis Calni_1180 PWY-6942 dTDP-D-desosamine biosynthesis Calni_1180 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Calni_1180 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Calni_1180 PWY-6974 dTDP-L-olivose biosynthesis Calni_1180 PWY-6976 dTDP-L-mycarose biosynthesis Calni_1180 PWY-7104 dTDP-L-megosamine biosynthesis Calni_1180 PWY-7301 dTDP-β-L-noviose biosynthesis Calni_1180 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Calni_1180 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Calni_1180 PWY-7316 dTDP-N-acetylviosamine biosynthesis Calni_1180 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Calni_1180 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Calni_1180 PWY-7414 dTDP-α-D-mycaminose biosynthesis Calni_1180 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Calni_1183 PWY-3221 dTDP-L-rhamnose biosynthesis II Calni_1183 PWY-6808 dTDP-D-forosamine biosynthesis Calni_1183 PWY-6942 dTDP-D-desosamine biosynthesis Calni_1183 PWY-6953 dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis Calni_1183 PWY-6973 dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis Calni_1183 PWY-6974 dTDP-L-olivose biosynthesis Calni_1183 PWY-6976 dTDP-L-mycarose biosynthesis Calni_1183 PWY-7104 dTDP-L-megosamine biosynthesis Calni_1183 PWY-7301 dTDP-β-L-noviose biosynthesis Calni_1183 PWY-7312 dTDP-D-β-fucofuranose biosynthesis Calni_1183 PWY-7315 dTDP-N-acetylthomosamine biosynthesis Calni_1183 PWY-7316 dTDP-N-acetylviosamine biosynthesis Calni_1183 PWY-7318 dTDP-3-acetamido-3,6-dideoxy-α-D-glucose biosynthesis Calni_1183 PWY-7413 dTDP-6-deoxy-α-D-allose biosynthesis Calni_1183 PWY-7414 dTDP-α-D-mycaminose biosynthesis Calni_1183 PWY-7440 dTDP-β-L-4-epi-vancosamine biosynthesis Calni_1184 PWY-5659 GDP-mannose biosynthesis Calni_1184 PWY-6073 alginate biosynthesis I (algal) Calni_1184 PWY-6082 alginate biosynthesis II (bacterial) Calni_1184 PWY-882 L-ascorbate biosynthesis I (L-galactose pathway) Calni_1188 PWY-3341 L-proline biosynthesis III Calni_1188 PWY-4981 L-proline biosynthesis II (from arginine) Calni_1188 PWY-6344 L-ornithine degradation II (Stickland reaction) Calni_1200 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_1200 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_1215 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Calni_1215 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Calni_1215 PWY-6268 adenosylcobalamin salvage from cobalamin Calni_1215 PWY-6269 adenosylcobalamin salvage from cobinamide II Calni_1216 PWY-1042 glycolysis IV (plant cytosol) Calni_1216 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Calni_1216 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1216 PWY-7385 1,3-propanediol biosynthesis (engineered) Calni_1217 PWY-6703 preQ0 biosynthesis Calni_1223 PWY-4381 fatty acid biosynthesis initiation I Calni_1224 PWY-4381 fatty acid biosynthesis initiation I Calni_1224 PWY-6799 fatty acid biosynthesis (plant mitochondria) Calni_1224 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Calni_1225 PWY-5367 petroselinate biosynthesis Calni_1225 PWY-5971 palmitate biosynthesis II (bacteria and plants) Calni_1225 PWY-5973 cis-vaccenate biosynthesis Calni_1225 PWY-5989 stearate biosynthesis II (bacteria and plants) Calni_1225 PWY-5994 palmitate biosynthesis I (animals and fungi) Calni_1225 PWY-6113 superpathway of mycolate biosynthesis Calni_1225 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) Calni_1225 PWY-6519 8-amino-7-oxononanoate biosynthesis I Calni_1225 PWY-6951 Calni_1225|Calni_1225|YP_004051296.1|GeneID:10009247 Calni_1225 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) Calni_1225 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Calni_1225 PWYG-321 mycolate biosynthesis Calni_1237 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III Calni_1237 PWY-7176 UTP and CTP de novo biosynthesis Calni_1237 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I Calni_1237 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II Calni_1237 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation Calni_1237 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV Calni_1237 PWY-7205 CMP phosphorylation Calni_1237 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP Calni_1237 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II Calni_1237 PWY-7221 guanosine ribonucleotides de novo biosynthesis Calni_1237 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II Calni_1237 PWY-7224 purine deoxyribonucleosides salvage Calni_1237 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I Calni_1237 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis Calni_1239 PWY-6700 queuosine biosynthesis Calni_1240 PWY-6700 queuosine biosynthesis Calni_1247 PWY-7396 butanol and isobutanol biosynthesis (engineered) Calni_1258 PWY-5381 pyridine nucleotide cycling (plants) Calni_1258 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Calni_1263 PWY-3781 aerobic respiration I (cytochrome c) Calni_1263 PWY-4302 aerobic respiration III (alternative oxidase pathway) Calni_1263 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Calni_1263 PWY-5690 TCA cycle II (plants and fungi) Calni_1263 PWY-6728 methylaspartate cycle Calni_1263 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Calni_1263 PWY-7254 TCA cycle VII (acetate-producers) Calni_1263 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Calni_1264 PWY-3781 aerobic respiration I (cytochrome c) Calni_1264 PWY-4302 aerobic respiration III (alternative oxidase pathway) Calni_1264 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation Calni_1264 PWY-5690 TCA cycle II (plants and fungi) Calni_1264 PWY-6728 methylaspartate cycle Calni_1264 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) Calni_1264 PWY-7254 TCA cycle VII (acetate-producers) Calni_1264 PWY-7279 aerobic respiration II (cytochrome c) (yeast) Calni_1278 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Calni_1278 PWY-5723 Rubisco shunt Calni_1303 PWY-1042 glycolysis IV (plant cytosol) Calni_1303 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1303 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_1303 PWY-7003 glycerol degradation to butanol Calni_1310 PWY-5316 nicotine biosynthesis Calni_1310 PWY-5381 pyridine nucleotide cycling (plants) Calni_1310 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde Calni_1310 PWY-7342 superpathway of nicotine biosynthesis Calni_1315 PWY-6938 NADH repair Calni_1341 PWY-5663 tetrahydrobiopterin biosynthesis I Calni_1341 PWY-5664 tetrahydrobiopterin biosynthesis II Calni_1341 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Calni_1341 PWY-6703 preQ0 biosynthesis Calni_1341 PWY-6983 tetrahydrobiopterin biosynthesis III Calni_1341 PWY-7442 drosopterin and aurodrosopterin biosynthesis Calni_1343 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Calni_1348 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_1348 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_1357 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Calni_1357 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Calni_1357 PWY-6164 3-dehydroquinate biosynthesis I Calni_1364 PWY-2201 folate transformations I Calni_1364 PWY-3841 folate transformations II Calni_1371 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Calni_1381 PWY-6749 CMP-legionaminate biosynthesis I Calni_1385 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1398 PWY-5344 L-homocysteine biosynthesis Calni_1424 PWY-7310 D-glucosaminate degradation Calni_1434 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Calni_1434 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Calni_1436 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Calni_1436 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Calni_1437 PWY-7176 UTP and CTP de novo biosynthesis Calni_1437 PWY-7177 UTP and CTP dephosphorylation II Calni_1437 PWY-7185 UTP and CTP dephosphorylation I Calni_1438 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Calni_1438 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Calni_1439 PWY-6012 acyl carrier protein metabolism I Calni_1439 PWY-6012-1 acyl carrier protein metabolism II (mammalian) Calni_1441 PWY-6749 CMP-legionaminate biosynthesis I Calni_1444 PWY-6614 tetrahydrofolate biosynthesis Calni_1446 PWY-6599 guanine and guanosine salvage II Calni_1446 PWY-6609 adenine and adenosine salvage III Calni_1446 PWY-6610 adenine and adenosine salvage IV Calni_1446 PWY-6620 guanine and guanosine salvage Calni_1448 PWY-3801 sucrose degradation II (sucrose synthase) Calni_1448 PWY-5054 sorbitol biosynthesis I Calni_1448 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Calni_1448 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II Calni_1448 PWY-5659 GDP-mannose biosynthesis Calni_1448 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_1448 PWY-621 sucrose degradation III (sucrose invertase) Calni_1448 PWY-622 starch biosynthesis Calni_1448 PWY-6531 mannitol cycle Calni_1448 PWY-6981 chitin biosynthesis Calni_1448 PWY-7238 sucrose biosynthesis II Calni_1448 PWY-7347 sucrose biosynthesis III Calni_1448 PWY-7385 1,3-propanediol biosynthesis (engineered) Calni_1452 PWY-43 putrescine biosynthesis II Calni_1475 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Calni_1487 PWY-7219 adenosine ribonucleotides de novo biosynthesis Calni_1516 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II Calni_1525 PWY-5381 pyridine nucleotide cycling (plants) Calni_1550 PWY-5382 hydrogen oxidation II (aerobic, NAD) Calni_1550 PWY-6758 hydrogen production II Calni_1562 PWY-6703 preQ0 biosynthesis Calni_1578 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Calni_1578 PWY-7400 L-arginine biosynthesis IV (archaebacteria) Calni_1579 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) Calni_1585 PWY-381 nitrate reduction II (assimilatory) Calni_1585 PWY-5675 nitrate reduction V (assimilatory) Calni_1585 PWY-6549 L-glutamine biosynthesis III Calni_1585 PWY-6963 ammonia assimilation cycle I Calni_1585 PWY-6964 ammonia assimilation cycle II Calni_1587 PWY-7219 adenosine ribonucleotides de novo biosynthesis Calni_1589 PWY-7219 adenosine ribonucleotides de novo biosynthesis Calni_1593 PWY-1042 glycolysis IV (plant cytosol) Calni_1593 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1593 PWY-6886 1-butanol autotrophic biosynthesis Calni_1593 PWY-6901 superpathway of glucose and xylose degradation Calni_1593 PWY-7003 glycerol degradation to butanol Calni_1594 PWY-1042 glycolysis IV (plant cytosol) Calni_1594 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1594 PWY-6901 superpathway of glucose and xylose degradation Calni_1594 PWY-7003 glycerol degradation to butanol Calni_1618 PWY-5491 diethylphosphate degradation Calni_1620 PWY-5669 phosphatidylethanolamine biosynthesis I Calni_1635 PWY-3801 sucrose degradation II (sucrose synthase) Calni_1635 PWY-6527 stachyose degradation Calni_1635 PWY-6981 chitin biosynthesis Calni_1635 PWY-7238 sucrose biosynthesis II Calni_1635 PWY-7343 UDP-glucose biosynthesis Calni_1638 PWY-5198 factor 420 biosynthesis Calni_1638 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II Calni_1638 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I Calni_1641 PWY-5067 glycogen biosynthesis II (from UDP-D-Glucose) Calni_1641 PWY-622 starch biosynthesis Calni_1643 PWY-6317 galactose degradation I (Leloir pathway) Calni_1643 PWY-6527 stachyose degradation Calni_1649 PWY-6163 chorismate biosynthesis from 3-dehydroquinate Calni_1651 PWY-7183 pyrimidine nucleobases salvage I Calni_1657 PWY-6167 flavin biosynthesis II (archaea) Calni_1657 PWY-6168 flavin biosynthesis III (fungi) Calni_1658 PWY-6167 flavin biosynthesis II (archaea) Calni_1658 PWY-6168 flavin biosynthesis III (fungi) Calni_1658 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) Calni_1659 PWY-6167 flavin biosynthesis II (archaea) Calni_1659 PWY-6168 flavin biosynthesis III (fungi) Calni_1659 PWY-7219 adenosine ribonucleotides de novo biosynthesis Calni_1662 PWY-5269 cardiolipin biosynthesis II Calni_1662 PWY-5668 cardiolipin biosynthesis I Calni_1674 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) Calni_1674 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) Calni_1675 PWY-3961 phosphopantothenate biosynthesis II Calni_1678 PWY-6823 molybdenum cofactor biosynthesis Calni_1678 PWY-6891 thiazole biosynthesis II (Bacillus) Calni_1678 PWY-6892 thiazole biosynthesis I (E. coli) Calni_1678 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis Calni_1691 PWY-5381 pyridine nucleotide cycling (plants) Calni_1709 PWY-622 starch biosynthesis Calni_1723 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_1723 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_1724 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_1724 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_1725 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Calni_1725 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) Calni_1725 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Calni_1725 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Calni_1727 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_1727 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_1728 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Calni_1728 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Calni_1728 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Calni_1729 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_1729 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_1741 PWY-6478 GDP-D-glycero-α-D-manno-heptose biosynthesis Calni_1753 PWY-1042 glycolysis IV (plant cytosol) Calni_1753 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Calni_1753 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1753 PWY-5723 Rubisco shunt Calni_1753 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_1753 PWY-6886 1-butanol autotrophic biosynthesis Calni_1753 PWY-6901 superpathway of glucose and xylose degradation Calni_1753 PWY-7003 glycerol degradation to butanol Calni_1753 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Calni_1753 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Calni_1756 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) Calni_1756 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) Calni_1772 PWY-5839 menaquinol-7 biosynthesis Calni_1772 PWY-5844 menaquinol-9 biosynthesis Calni_1772 PWY-5849 menaquinol-6 biosynthesis Calni_1772 PWY-5890 menaquinol-10 biosynthesis Calni_1772 PWY-5891 menaquinol-11 biosynthesis Calni_1772 PWY-5892 menaquinol-12 biosynthesis Calni_1772 PWY-5895 menaquinol-13 biosynthesis Calni_1784 PWY-7219 adenosine ribonucleotides de novo biosynthesis Calni_1791 PWY-6123 inosine-5'-phosphate biosynthesis I Calni_1791 PWY-7234 inosine-5'-phosphate biosynthesis III Calni_1795 PWY-6823 molybdenum cofactor biosynthesis Calni_1804 PWY-7335 UDP-N-acetyl-α-D-mannosaminouronate biosynthesis Calni_1810 PWY-2941 L-lysine biosynthesis II Calni_1810 PWY-5097 L-lysine biosynthesis VI Calni_1811 PWY-2941 L-lysine biosynthesis II Calni_1811 PWY-2942 L-lysine biosynthesis III Calni_1811 PWY-5097 L-lysine biosynthesis VI Calni_1812 PWY-2941 L-lysine biosynthesis II Calni_1812 PWY-2942 L-lysine biosynthesis III Calni_1812 PWY-5097 L-lysine biosynthesis VI Calni_1838 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) Calni_1838 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) Calni_1845 PWY-1042 glycolysis IV (plant cytosol) Calni_1845 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Calni_1845 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1845 PWY-5723 Rubisco shunt Calni_1845 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_1845 PWY-6886 1-butanol autotrophic biosynthesis Calni_1845 PWY-6901 superpathway of glucose and xylose degradation Calni_1845 PWY-7003 glycerol degradation to butanol Calni_1845 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Calni_1845 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) Calni_1858 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Calni_1858 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_1858 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Calni_1858 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Calni_1859 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I Calni_1859 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) Calni_1859 PWY-6164 3-dehydroquinate biosynthesis I Calni_1866 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) Calni_1866 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) Calni_1866 PWY-6897 thiamin salvage II Calni_1866 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) Calni_1866 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) Calni_1866 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) Calni_1866 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) Calni_1885 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Calni_1885 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Calni_1885 PWY-6269 adenosylcobalamin salvage from cobinamide II Calni_1887 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Calni_1887 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Calni_1887 PWY-6269 adenosylcobalamin salvage from cobinamide II Calni_1888 PWY-5508 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II Calni_1888 PWY-5509 adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I Calni_1888 PWY-6269 adenosylcobalamin salvage from cobinamide II Calni_1927 PWY-5958 acridone alkaloid biosynthesis Calni_1927 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis Calni_1927 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis Calni_1933 PWY-1042 glycolysis IV (plant cytosol) Calni_1933 PWY-1861 formaldehyde assimilation II (RuMP Cycle) Calni_1933 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_1933 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_1933 PWY-7385 1,3-propanediol biosynthesis (engineered) Calni_1934 PWY-4361 S-methyl-5-thio-α-D-ribose 1-phosphate degradation Calni_1934 PWY-7174 S-methyl-5-thio-α-D-ribose 1-phosphate degradation II Calni_1938 PWY-5269 cardiolipin biosynthesis II Calni_1938 PWY-5668 cardiolipin biosynthesis I Calni_1961 PWY-5738 GDP-6-deoxy-D-talose biosynthesis Calni_1961 PWY-5739 GDP-D-perosamine biosynthesis Calni_1961 PWY-5740 GDP-L-colitose biosynthesis Calni_1961 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Calni_1962 PWY-66 GDP-L-fucose biosynthesis I (from GDP-D-mannose) Calni_1978 PWY-5265 peptidoglycan biosynthesis II (staphylococci) Calni_1978 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) Calni_1978 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) Calni_1980 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Calni_1980 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Calni_1981 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Calni_1981 PWY-5189 tetrapyrrole biosynthesis II (from glycine) Calni_1982 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Calni_1989 PWY-2723 trehalose degradation V Calni_1989 PWY-3801 sucrose degradation II (sucrose synthase) Calni_1989 PWY-5384 sucrose degradation IV (sucrose phosphorylase) Calni_1989 PWY-5661 GDP-glucose biosynthesis Calni_1989 PWY-5661-1 Calni_1989|Calni_1989|YP_004052047.1|GeneID:10010035 Calni_1989 PWY-5940 streptomycin biosynthesis Calni_1989 PWY-5941 glycogen degradation II (eukaryotic) Calni_1989 PWY-622 starch biosynthesis Calni_1989 PWY-6731 starch degradation III Calni_1989 PWY-6737 starch degradation V Calni_1989 PWY-6749 CMP-legionaminate biosynthesis I Calni_1989 PWY-7238 sucrose biosynthesis II Calni_1989 PWY-7343 UDP-glucose biosynthesis Calni_1999 PWY-7560 methylerythritol phosphate pathway II Calni_2007 PWY-7346 UDP-α-D-glucuronate biosynthesis (from UDP-glucose) Calni_2012 PWY-6829 tRNA methylation (yeast) Calni_2012 PWY-7285 methylwyosine biosynthesis Calni_2012 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis Calni_2047 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) Calni_2053 PWY-1042 glycolysis IV (plant cytosol) Calni_2053 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) Calni_2053 PWY-5484 glycolysis II (from fructose 6-phosphate) Calni_2053 PWY-5723 Rubisco shunt Calni_2053 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) Calni_2053 PWY-6886 1-butanol autotrophic biosynthesis Calni_2053 PWY-6901 superpathway of glucose and xylose degradation Calni_2053 PWY-7003 glycerol degradation to butanol Calni_2053 PWY-7124 ethylene biosynthesis V (engineered) Calni_2053 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) Calni_2058 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type Calni_2058 PWY-6549 L-glutamine biosynthesis III Calni_2058 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type Calni_2058 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type Calni_2061 PWY-5198 factor 420 biosynthesis