Cal6303_0002	PWY-6823	molybdenum cofactor biosynthesis
Cal6303_0010	PWY-6703	preQ<sub>0</sub> biosynthesis
Cal6303_0018	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Cal6303_0052	PWY-5482	pyruvate fermentation to acetate II
Cal6303_0052	PWY-5485	pyruvate fermentation to acetate IV
Cal6303_0052	PWY-5497	purine nucleobases degradation II (anaerobic)
Cal6303_0054	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_0054	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_0056	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cal6303_0061	PWY-3781	aerobic respiration I (cytochrome c)
Cal6303_0061	PWY-4521	arsenite oxidation I (respiratory)
Cal6303_0061	PWY-6692	Fe(II) oxidation
Cal6303_0061	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cal6303_0087	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Cal6303_0087	PWY-6853	ethylene biosynthesis II (microbes)
Cal6303_0087	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Cal6303_0095	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_0095	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_0148	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cal6303_0148	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cal6303_0148	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cal6303_0149	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cal6303_0149	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cal6303_0149	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cal6303_0151	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Cal6303_0151	PWY-622	starch biosynthesis
Cal6303_0178	PWY-5101	L-isoleucine biosynthesis II
Cal6303_0178	PWY-6871	3-methylbutanol biosynthesis
Cal6303_0196	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_0196	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_0328	PWY-2261	ascorbate glutathione cycle
Cal6303_0328	PWY-4061	glutathione-mediated detoxification I
Cal6303_0328	PWY-4202	arsenate detoxification I (glutaredoxin)
Cal6303_0328	PWY-6370	ascorbate recycling (cytosolic)
Cal6303_0328	PWY-6842	glutathione-mediated detoxification II
Cal6303_0328	PWY-7112	4-hydroxy-2-nonenal detoxification
Cal6303_0328	PWY-7533	gliotoxin biosynthesis
Cal6303_0397	PWY-6823	molybdenum cofactor biosynthesis
Cal6303_0397	PWY-6891	thiazole biosynthesis II (Bacillus)
Cal6303_0397	PWY-6892	thiazole biosynthesis I (E. coli)
Cal6303_0397	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cal6303_0399	PWY-6823	molybdenum cofactor biosynthesis
Cal6303_0437	PWY-2941	L-lysine biosynthesis II
Cal6303_0437	PWY-5097	L-lysine biosynthesis VI
Cal6303_0460	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_0460	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_0461	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cal6303_0469	PWY-6906	chitin derivatives degradation
Cal6303_0469	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Cal6303_0469	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Cal6303_0473	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Cal6303_0473	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Cal6303_0507	PWY-5874	heme degradation
Cal6303_0507	PWY-5915	phycoerythrobilin biosynthesis I
Cal6303_0507	PWY-5917	phycocyanobilin biosynthesis
Cal6303_0507	PWY-7170	phytochromobilin biosynthesis
Cal6303_0511	PWY-5506	methanol oxidation to formaldehyde IV
Cal6303_0520	PWY-5723	Rubisco shunt
Cal6303_0529	PWY-842	starch degradation I
Cal6303_0541	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_0541	PWY-1622	formaldehyde assimilation I (serine pathway)
Cal6303_0541	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cal6303_0541	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_0541	PWY-5723	Rubisco shunt
Cal6303_0541	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cal6303_0541	PWY-6886	1-butanol autotrophic biosynthesis
Cal6303_0541	PWY-6901	superpathway of glucose and xylose degradation
Cal6303_0541	PWY-7003	glycerol degradation to butanol
Cal6303_0541	PWY-7124	ethylene biosynthesis V (engineered)
Cal6303_0541	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Cal6303_0554	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_0554	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cal6303_0554	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_0554	PWY-5723	Rubisco shunt
Cal6303_0554	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cal6303_0554	PWY-6886	1-butanol autotrophic biosynthesis
Cal6303_0554	PWY-6901	superpathway of glucose and xylose degradation
Cal6303_0554	PWY-7003	glycerol degradation to butanol
Cal6303_0554	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Cal6303_0554	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cal6303_0557	PWY-3461	L-tyrosine biosynthesis II
Cal6303_0557	PWY-3462	L-phenylalanine biosynthesis II
Cal6303_0557	PWY-6120	L-tyrosine biosynthesis III
Cal6303_0557	PWY-6627	salinosporamide A biosynthesis
Cal6303_0570	PWY-5101	L-isoleucine biosynthesis II
Cal6303_0570	PWY-5103	L-isoleucine biosynthesis III
Cal6303_0570	PWY-5104	L-isoleucine biosynthesis IV
Cal6303_0570	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cal6303_0578	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Cal6303_0585	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cal6303_0585	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cal6303_0585	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Cal6303_0597	PWY-6936	seleno-amino acid biosynthesis
Cal6303_0597	PWY-7274	D-cycloserine biosynthesis
Cal6303_0610	PWY-7238	sucrose biosynthesis II
Cal6303_0610	PWY-7347	sucrose biosynthesis III
Cal6303_0612	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cal6303_0612	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Cal6303_0612	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Cal6303_0627	PWY-101	photosynthesis light reactions
Cal6303_0627	PWY-6785	hydrogen production VIII
Cal6303_0629	PWY-6936	seleno-amino acid biosynthesis
Cal6303_0629	PWY-7274	D-cycloserine biosynthesis
Cal6303_0630	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Cal6303_0632	PWY-6823	molybdenum cofactor biosynthesis
Cal6303_0632	PWY-6891	thiazole biosynthesis II (Bacillus)
Cal6303_0632	PWY-6892	thiazole biosynthesis I (E. coli)
Cal6303_0632	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cal6303_0637	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_0637	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cal6303_0637	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cal6303_0637	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_0642	PWY-5316	nicotine biosynthesis
Cal6303_0642	PWY-5381	pyridine nucleotide cycling (plants)
Cal6303_0642	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Cal6303_0642	PWY-7342	superpathway of nicotine biosynthesis
Cal6303_0667	PWY-5686	UMP biosynthesis
Cal6303_0676	PWY-6454	vancomycin resistance I
Cal6303_0676	PWY-6455	vancomycin resistance II
Cal6303_0683	PWY-5386	methylglyoxal degradation I
Cal6303_0692	PWY-5532	adenosine nucleotides degradation IV
Cal6303_0692	PWY-5723	Rubisco shunt
Cal6303_0706	PWY-622	starch biosynthesis
Cal6303_0707	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cal6303_0707	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cal6303_0708	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cal6303_0708	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cal6303_0708	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cal6303_0711	PWY-101	photosynthesis light reactions
Cal6303_0711	PWY-6785	hydrogen production VIII
Cal6303_0714	PWY-5198	factor 420 biosynthesis
Cal6303_0718	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cal6303_0718	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cal6303_0718	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Cal6303_0735	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cal6303_0735	PWY-5723	Rubisco shunt
Cal6303_0757	PWY-7560	methylerythritol phosphate pathway II
Cal6303_0767	PWY-6167	flavin biosynthesis II (archaea)
Cal6303_0767	PWY-6168	flavin biosynthesis III (fungi)
Cal6303_0767	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cal6303_0768	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cal6303_0768	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cal6303_0771	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cal6303_0771	PWY-6148	tetrahydromethanopterin biosynthesis
Cal6303_0771	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Cal6303_0771	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cal6303_0772	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Cal6303_0772	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Cal6303_0773	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Cal6303_0773	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Cal6303_0787	PWY-6938	NADH repair
Cal6303_0794	PWY-101	photosynthesis light reactions
Cal6303_0794	PWY-6785	hydrogen production VIII
Cal6303_0795	PWY-101	photosynthesis light reactions
Cal6303_0795	PWY-6785	hydrogen production VIII
Cal6303_0798	PWY-6749	CMP-legionaminate biosynthesis I
Cal6303_0806	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cal6303_0806	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cal6303_0842	PWY-7560	methylerythritol phosphate pathway II
Cal6303_0858	PWY-7560	methylerythritol phosphate pathway II
Cal6303_0945	PWY-5694	allantoin degradation to glyoxylate I
Cal6303_0945	PWY-5705	allantoin degradation to glyoxylate III
Cal6303_0953	PWY-5958	acridone alkaloid biosynthesis
Cal6303_0953	PWY-6543	4-aminobenzoate biosynthesis
Cal6303_0953	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cal6303_0953	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Cal6303_0953	PWY-6722	candicidin biosynthesis
Cal6303_0983	PWY-6834	spermidine biosynthesis III
Cal6303_0994	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cal6303_0997	PWY-5350	thiosulfate disproportionation III (rhodanese)
Cal6303_0998	PWY-4261	glycerol degradation I
Cal6303_1016	PWY-2201	folate transformations I
Cal6303_1016	PWY-3841	folate transformations II
Cal6303_1024	PWY-6683	sulfate reduction III (assimilatory)
Cal6303_1045	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_1058	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_1058	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_1077	PWY-40	putrescine biosynthesis I
Cal6303_1077	PWY-43	putrescine biosynthesis II
Cal6303_1077	PWY-6305	putrescine biosynthesis IV
Cal6303_1077	PWY-6834	spermidine biosynthesis III
Cal6303_1078	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cal6303_1078	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Cal6303_1078	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cal6303_1078	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cal6303_1078	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Cal6303_1078	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cal6303_1078	PWY-7205	CMP phosphorylation
Cal6303_1078	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cal6303_1078	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cal6303_1078	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_1078	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cal6303_1078	PWY-7224	purine deoxyribonucleosides salvage
Cal6303_1078	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cal6303_1078	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cal6303_1080	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cal6303_1091	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Cal6303_1092	PWY-5101	L-isoleucine biosynthesis II
Cal6303_1092	PWY-5103	L-isoleucine biosynthesis III
Cal6303_1092	PWY-5104	L-isoleucine biosynthesis IV
Cal6303_1092	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Cal6303_1092	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Cal6303_1092	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Cal6303_1092	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cal6303_1119	PWY-101	photosynthesis light reactions
Cal6303_1119	PWY-6785	hydrogen production VIII
Cal6303_1153	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Cal6303_1157	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Cal6303_1160	PWY-3081	L-lysine biosynthesis V
Cal6303_1160	PWY-6871	3-methylbutanol biosynthesis
Cal6303_1194	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_1194	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_1204	PWY-5169	cyanurate degradation
Cal6303_1204	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Cal6303_1212	PWY-7560	methylerythritol phosphate pathway II
Cal6303_1232	PWY-5686	UMP biosynthesis
Cal6303_1248	PWY-1622	formaldehyde assimilation I (serine pathway)
Cal6303_1248	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cal6303_1248	PWY-5913	TCA cycle VI (obligate autotrophs)
Cal6303_1248	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cal6303_1248	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Cal6303_1248	PWY-6549	L-glutamine biosynthesis III
Cal6303_1248	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cal6303_1248	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cal6303_1248	PWY-7124	ethylene biosynthesis V (engineered)
Cal6303_1255	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cal6303_1257	PWY-101	photosynthesis light reactions
Cal6303_1257	PWY-6785	hydrogen production VIII
Cal6303_1276	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cal6303_1276	PWY-6855	chitin degradation I (archaea)
Cal6303_1276	PWY-6906	chitin derivatives degradation
Cal6303_1285	PWY-5958	acridone alkaloid biosynthesis
Cal6303_1285	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cal6303_1285	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Cal6303_1305	PWY-5381	pyridine nucleotide cycling (plants)
Cal6303_1305	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Cal6303_1306	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cal6303_1306	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cal6303_1306	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cal6303_1307	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cal6303_1307	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cal6303_1307	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cal6303_1307	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cal6303_1384	PWY-621	sucrose degradation III (sucrose invertase)
Cal6303_1394	PWY-5532	adenosine nucleotides degradation IV
Cal6303_1394	PWY-5723	Rubisco shunt
Cal6303_1398	PWY-6891	thiazole biosynthesis II (Bacillus)
Cal6303_1398	PWY-6892	thiazole biosynthesis I (E. coli)
Cal6303_1398	PWY-7560	methylerythritol phosphate pathway II
Cal6303_1403	PWY-101	photosynthesis light reactions
Cal6303_1403	PWY-6785	hydrogen production VIII
Cal6303_1434	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Cal6303_1434	PWY-7205	CMP phosphorylation
Cal6303_1438	PWY-2161	folate polyglutamylation
Cal6303_1461	PWY-2201	folate transformations I
Cal6303_1461	PWY-5497	purine nucleobases degradation II (anaerobic)
Cal6303_1469	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_1488	PWY-5367	petroselinate biosynthesis
Cal6303_1488	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cal6303_1488	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cal6303_1488	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cal6303_1488	PWY-5994	palmitate biosynthesis I (animals and fungi)
Cal6303_1488	PWY-6113	superpathway of mycolate biosynthesis
Cal6303_1488	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cal6303_1488	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cal6303_1488	PWY-6951	Cal6303_1488|Cal6303_1488|YP_007136508.1|GeneID:14163547
Cal6303_1488	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Cal6303_1488	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cal6303_1488	PWYG-321	mycolate biosynthesis
Cal6303_1492	PWY-6123	inosine-5'-phosphate biosynthesis I
Cal6303_1492	PWY-6124	inosine-5'-phosphate biosynthesis II
Cal6303_1492	PWY-7234	inosine-5'-phosphate biosynthesis III
Cal6303_1507	PWY-5659	GDP-mannose biosynthesis
Cal6303_1507	PWY-6073	alginate biosynthesis I (algal)
Cal6303_1507	PWY-6082	alginate biosynthesis II (bacterial)
Cal6303_1507	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Cal6303_1515	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Cal6303_1525	PWY-3821	galactose degradation III
Cal6303_1525	PWY-6317	galactose degradation I (Leloir pathway)
Cal6303_1525	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cal6303_1525	PWY-6527	stachyose degradation
Cal6303_1525	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cal6303_1525	PWY-7344	UDP-D-galactose biosynthesis
Cal6303_1526	PWY-5667	CDP-diacylglycerol biosynthesis I
Cal6303_1526	PWY-5981	CDP-diacylglycerol biosynthesis III
Cal6303_1526	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
Cal6303_1526	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
Cal6303_1530	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cal6303_1530	PWY-5686	UMP biosynthesis
Cal6303_1530	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cal6303_1581	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_1583	PWY-6910	hydroxymethylpyrimidine salvage
Cal6303_1583	PWY-7356	thiamin salvage IV (yeast)
Cal6303_1583	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Cal6303_1586	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Cal6303_1588	PWY-6749	CMP-legionaminate biosynthesis I
Cal6303_1594	PWY-6854	ethylene biosynthesis III (microbes)
Cal6303_1596	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cal6303_1596	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cal6303_1596	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cal6303_1612	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cal6303_1612	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cal6303_1612	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cal6303_1612	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Cal6303_1612	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cal6303_1612	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cal6303_1641	PWY-6605	adenine and adenosine salvage II
Cal6303_1641	PWY-6610	adenine and adenosine salvage IV
Cal6303_1648	PWY-3961	phosphopantothenate biosynthesis II
Cal6303_1653	PWY-4983	L-citrulline-nitric oxide cycle
Cal6303_1653	PWY-4984	urea cycle
Cal6303_1653	PWY-5	canavanine biosynthesis
Cal6303_1653	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cal6303_1653	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cal6303_1669	PWY-6832	2-aminoethylphosphonate degradation II
Cal6303_1675	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_1675	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cal6303_1675	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_1684	PWY-5316	nicotine biosynthesis
Cal6303_1684	PWY-7342	superpathway of nicotine biosynthesis
Cal6303_1686	PWY-6012	acyl carrier protein metabolism I
Cal6303_1686	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cal6303_1688	PWY-4381	fatty acid biosynthesis initiation I
Cal6303_1688	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Cal6303_1688	PWY-723	alkylnitronates degradation
Cal6303_1688	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cal6303_1737	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Cal6303_1739	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cal6303_1739	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cal6303_1739	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cal6303_1743	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cal6303_1744	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_1751	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_1751	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_1805	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_1805	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_1805	PWY-6901	superpathway of glucose and xylose degradation
Cal6303_1805	PWY-7003	glycerol degradation to butanol
Cal6303_1817	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Cal6303_1817	PWY-5940	streptomycin biosynthesis
Cal6303_1856	PWY-5917	phycocyanobilin biosynthesis
Cal6303_1878	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cal6303_1878	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cal6303_1878	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cal6303_1880	PWY-6164	3-dehydroquinate biosynthesis I
Cal6303_1889	PWY-6167	flavin biosynthesis II (archaea)
Cal6303_1891	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_1891	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_1919	PWY-1281	sulfoacetaldehyde degradation I
Cal6303_1919	PWY-5482	pyruvate fermentation to acetate II
Cal6303_1919	PWY-5485	pyruvate fermentation to acetate IV
Cal6303_1919	PWY-5497	purine nucleobases degradation II (anaerobic)
Cal6303_1919	PWY-6637	sulfolactate degradation II
Cal6303_1927	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Cal6303_1937	PWY-6832	2-aminoethylphosphonate degradation II
Cal6303_1942	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Cal6303_1942	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Cal6303_1959	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_1959	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_1974	PWY-6891	thiazole biosynthesis II (Bacillus)
Cal6303_1974	PWY-6892	thiazole biosynthesis I (E. coli)
Cal6303_1982	PWY-5692	allantoin degradation to glyoxylate II
Cal6303_1982	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Cal6303_1993	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cal6303_1996	PWY-5386	methylglyoxal degradation I
Cal6303_1998	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Cal6303_1998	PWY-5739	GDP-D-perosamine biosynthesis
Cal6303_1998	PWY-5740	GDP-L-colitose biosynthesis
Cal6303_1998	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Cal6303_2012	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cal6303_2012	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Cal6303_2020	PWY-3781	aerobic respiration I (cytochrome c)
Cal6303_2020	PWY-4521	arsenite oxidation I (respiratory)
Cal6303_2020	PWY-6692	Fe(II) oxidation
Cal6303_2020	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cal6303_2054	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Cal6303_2072	PWY-6700	queuosine biosynthesis
Cal6303_2091	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Cal6303_2091	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Cal6303_2091	PWY-6164	3-dehydroquinate biosynthesis I
Cal6303_2114	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_2114	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cal6303_2114	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cal6303_2114	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_2135	PWY-2721	trehalose degradation III
Cal6303_2135	PWY-2722	trehalose degradation IV
Cal6303_2135	PWY-6317	galactose degradation I (Leloir pathway)
Cal6303_2135	PWY-7459	kojibiose degradation
Cal6303_2136	PWY-3801	sucrose degradation II (sucrose synthase)
Cal6303_2141	PWY-3221	dTDP-L-rhamnose biosynthesis II
Cal6303_2141	PWY-6808	dTDP-D-forosamine biosynthesis
Cal6303_2141	PWY-6942	dTDP-D-desosamine biosynthesis
Cal6303_2141	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Cal6303_2141	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Cal6303_2141	PWY-6974	dTDP-L-olivose biosynthesis
Cal6303_2141	PWY-6976	dTDP-L-mycarose biosynthesis
Cal6303_2141	PWY-7104	dTDP-L-megosamine biosynthesis
Cal6303_2141	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Cal6303_2141	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Cal6303_2141	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Cal6303_2141	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Cal6303_2141	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Cal6303_2141	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Cal6303_2141	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Cal6303_2141	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Cal6303_2142	PWY-3221	dTDP-L-rhamnose biosynthesis II
Cal6303_2142	PWY-6808	dTDP-D-forosamine biosynthesis
Cal6303_2142	PWY-6942	dTDP-D-desosamine biosynthesis
Cal6303_2142	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Cal6303_2142	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Cal6303_2142	PWY-6974	dTDP-L-olivose biosynthesis
Cal6303_2142	PWY-6976	dTDP-L-mycarose biosynthesis
Cal6303_2142	PWY-7104	dTDP-L-megosamine biosynthesis
Cal6303_2142	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Cal6303_2142	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Cal6303_2142	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Cal6303_2142	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Cal6303_2142	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Cal6303_2142	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Cal6303_2142	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Cal6303_2142	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Cal6303_2166	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cal6303_2166	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cal6303_2166	PWY-5194	siroheme biosynthesis
Cal6303_2166	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cal6303_2423	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_2423	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cal6303_2423	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cal6303_2423	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_2600	PWY-6409	pyoverdine I biosynthesis
Cal6303_2600	PWY-6562	norspermidine biosynthesis
Cal6303_2600	PWY-761	rhizobactin 1021 biosynthesis
Cal6303_2854	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_2854	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cal6303_2854	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cal6303_2854	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_2867	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Cal6303_2884	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cal6303_2884	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cal6303_2899	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cal6303_2899	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cal6303_2909	PWY-6349	CDP-archaeol biosynthesis
Cal6303_2925	PWY-4983	L-citrulline-nitric oxide cycle
Cal6303_2925	PWY-4984	urea cycle
Cal6303_2925	PWY-5	canavanine biosynthesis
Cal6303_2925	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cal6303_2925	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cal6303_2964	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Cal6303_2964	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Cal6303_2964	PWY-6164	3-dehydroquinate biosynthesis I
Cal6303_2968	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cal6303_2968	PWY-5723	Rubisco shunt
Cal6303_2981	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_2981	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_2984	PWY-5491	diethylphosphate degradation
Cal6303_3012	PWY-5101	L-isoleucine biosynthesis II
Cal6303_3012	PWY-5103	L-isoleucine biosynthesis III
Cal6303_3012	PWY-5104	L-isoleucine biosynthesis IV
Cal6303_3012	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cal6303_3028	PWY-5532	adenosine nucleotides degradation IV
Cal6303_3028	PWY-5723	Rubisco shunt
Cal6303_3034	PWY-1001	cellulose biosynthesis
Cal6303_3036	PWY-6788	cellulose degradation II (fungi)
Cal6303_3043	PWY-5532	adenosine nucleotides degradation IV
Cal6303_3043	PWY-5723	Rubisco shunt
Cal6303_3045	PWY-5532	adenosine nucleotides degradation IV
Cal6303_3045	PWY-5723	Rubisco shunt
Cal6303_3047	PWY-6654	phosphopantothenate biosynthesis III
Cal6303_3137	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cal6303_3137	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cal6303_3137	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cal6303_3146	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cal6303_3146	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cal6303_3219	PWY-1622	formaldehyde assimilation I (serine pathway)
Cal6303_3219	PWY-181	photorespiration
Cal6303_3219	PWY-2161	folate polyglutamylation
Cal6303_3219	PWY-2201	folate transformations I
Cal6303_3219	PWY-3661	glycine betaine degradation I
Cal6303_3219	PWY-3661-1	glycine betaine degradation II (mammalian)
Cal6303_3219	PWY-3841	folate transformations II
Cal6303_3219	PWY-5497	purine nucleobases degradation II (anaerobic)
Cal6303_3229	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_3229	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_3229	PWY-6886	1-butanol autotrophic biosynthesis
Cal6303_3229	PWY-6901	superpathway of glucose and xylose degradation
Cal6303_3229	PWY-7003	glycerol degradation to butanol
Cal6303_3231	PWY-842	starch degradation I
Cal6303_3244	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cal6303_3244	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cal6303_3244	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cal6303_3248	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cal6303_3248	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Cal6303_3248	PWY-7242	D-fructuronate degradation
Cal6303_3248	PWY-7310	D-glucosaminate degradation
Cal6303_3255	PWY-101	photosynthesis light reactions
Cal6303_3255	PWY-6785	hydrogen production VIII
Cal6303_3272	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cal6303_3272	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cal6303_3272	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cal6303_3272	PWY-6113	superpathway of mycolate biosynthesis
Cal6303_3272	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cal6303_3272	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cal6303_3272	PWY-7096	triclosan resistance
Cal6303_3272	PWYG-321	mycolate biosynthesis
Cal6303_3277	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_3277	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_3279	PWY-5101	L-isoleucine biosynthesis II
Cal6303_3279	PWY-5103	L-isoleucine biosynthesis III
Cal6303_3279	PWY-5104	L-isoleucine biosynthesis IV
Cal6303_3279	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Cal6303_3279	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Cal6303_3279	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Cal6303_3279	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cal6303_3280	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cal6303_3280	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cal6303_3280	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cal6303_3280	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cal6303_3296	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Cal6303_3297	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Cal6303_3297	PWY-5739	GDP-D-perosamine biosynthesis
Cal6303_3297	PWY-5740	GDP-L-colitose biosynthesis
Cal6303_3297	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Cal6303_3324	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cal6303_3338	PWY-6749	CMP-legionaminate biosynthesis I
Cal6303_3347	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Cal6303_3347	PWY-7118	chitin degradation to ethanol
Cal6303_3370	PWY-4381	fatty acid biosynthesis initiation I
Cal6303_3384	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cal6303_3384	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cal6303_3410	PWY-2941	L-lysine biosynthesis II
Cal6303_3410	PWY-2942	L-lysine biosynthesis III
Cal6303_3410	PWY-5097	L-lysine biosynthesis VI
Cal6303_3410	PWY-6559	spermidine biosynthesis II
Cal6303_3410	PWY-6562	norspermidine biosynthesis
Cal6303_3410	PWY-7153	grixazone biosynthesis
Cal6303_3417	PWY-5663	tetrahydrobiopterin biosynthesis I
Cal6303_3417	PWY-5664	tetrahydrobiopterin biosynthesis II
Cal6303_3417	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cal6303_3417	PWY-6703	preQ<sub>0</sub> biosynthesis
Cal6303_3417	PWY-6983	tetrahydrobiopterin biosynthesis III
Cal6303_3417	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Cal6303_3434	PWY-5988	wound-induced proteolysis I
Cal6303_3434	PWY-6018	seed germination protein turnover
Cal6303_3447	PWY-2941	L-lysine biosynthesis II
Cal6303_3447	PWY-2942	L-lysine biosynthesis III
Cal6303_3447	PWY-5097	L-lysine biosynthesis VI
Cal6303_3447	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cal6303_3447	PWY-6559	spermidine biosynthesis II
Cal6303_3447	PWY-6562	norspermidine biosynthesis
Cal6303_3447	PWY-7153	grixazone biosynthesis
Cal6303_3447	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cal6303_3448	PWY-2941	L-lysine biosynthesis II
Cal6303_3448	PWY-2942	L-lysine biosynthesis III
Cal6303_3448	PWY-5097	L-lysine biosynthesis VI
Cal6303_3461	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_3461	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cal6303_3461	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_3461	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cal6303_3461	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cal6303_3486	PWY-6823	molybdenum cofactor biosynthesis
Cal6303_3490	PWY-5386	methylglyoxal degradation I
Cal6303_3492	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cal6303_3492	PWY-6855	chitin degradation I (archaea)
Cal6303_3492	PWY-6906	chitin derivatives degradation
Cal6303_3493	PWY-5097	L-lysine biosynthesis VI
Cal6303_3497	PWY-5667	CDP-diacylglycerol biosynthesis I
Cal6303_3497	PWY-5981	CDP-diacylglycerol biosynthesis III
Cal6303_3503	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cal6303_3503	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cal6303_3511	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Cal6303_3511	PWY-2201	folate transformations I
Cal6303_3511	PWY-3841	folate transformations II
Cal6303_3511	PWY-5030	L-histidine degradation III
Cal6303_3511	PWY-5497	purine nucleobases degradation II (anaerobic)
Cal6303_3511	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Cal6303_3516	PWY-5386	methylglyoxal degradation I
Cal6303_3518	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_3518	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_3520	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_3520	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_3541	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cal6303_3541	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cal6303_3577	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_3577	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_3596	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cal6303_3597	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_3621	PWY-5381	pyridine nucleotide cycling (plants)
Cal6303_3621	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cal6303_3621	PWY-6596	adenosine nucleotides degradation I
Cal6303_3621	PWY-6606	guanosine nucleotides degradation II
Cal6303_3621	PWY-6607	guanosine nucleotides degradation I
Cal6303_3621	PWY-6608	guanosine nucleotides degradation III
Cal6303_3621	PWY-7185	UTP and CTP dephosphorylation I
Cal6303_3622	PWY-5694	allantoin degradation to glyoxylate I
Cal6303_3622	PWY-5705	allantoin degradation to glyoxylate III
Cal6303_3652	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Cal6303_3652	PWY-7177	UTP and CTP dephosphorylation II
Cal6303_3652	PWY-7185	UTP and CTP dephosphorylation I
Cal6303_3662	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_3662	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_3666	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cal6303_3680	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_3680	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_3680	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cal6303_3680	PWY-7003	glycerol degradation to butanol
Cal6303_3681	PWY-6614	tetrahydrofolate biosynthesis
Cal6303_3682	PWY-5194	siroheme biosynthesis
Cal6303_3682	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cal6303_3683	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cal6303_3712	PWY-6167	flavin biosynthesis II (archaea)
Cal6303_3712	PWY-6168	flavin biosynthesis III (fungi)
Cal6303_3726	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cal6303_3726	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cal6303_3726	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cal6303_3728	PWY-6700	queuosine biosynthesis
Cal6303_3738	PWY-5839	menaquinol-7 biosynthesis
Cal6303_3738	PWY-5844	menaquinol-9 biosynthesis
Cal6303_3738	PWY-5849	menaquinol-6 biosynthesis
Cal6303_3738	PWY-5890	menaquinol-10 biosynthesis
Cal6303_3738	PWY-5891	menaquinol-11 biosynthesis
Cal6303_3738	PWY-5892	menaquinol-12 biosynthesis
Cal6303_3738	PWY-5895	menaquinol-13 biosynthesis
Cal6303_3753	PWY-6098	diploterol and cycloartenol biosynthesis
Cal6303_3753	PWY-7072	hopanoid biosynthesis (bacteria)
Cal6303_3761	PWY-2941	L-lysine biosynthesis II
Cal6303_3761	PWY-2942	L-lysine biosynthesis III
Cal6303_3761	PWY-5097	L-lysine biosynthesis VI
Cal6303_3779	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cal6303_3779	PWY-6416	quinate degradation II
Cal6303_3779	PWY-6707	gallate biosynthesis
Cal6303_3790	PWY-5704	urea degradation II
Cal6303_3820	PWY-2201	folate transformations I
Cal6303_3820	PWY-3841	folate transformations II
Cal6303_3824	PWY-6123	inosine-5'-phosphate biosynthesis I
Cal6303_3824	PWY-7234	inosine-5'-phosphate biosynthesis III
Cal6303_3831	PWY-2781	<i>cis</i>-zeatin biosynthesis
Cal6303_3833	PWY-702	L-methionine biosynthesis II
Cal6303_3843	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Cal6303_3843	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Cal6303_3843	PWY-6897	thiamin salvage II
Cal6303_3843	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Cal6303_3843	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Cal6303_3843	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Cal6303_3843	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Cal6303_3866	PWY-101	photosynthesis light reactions
Cal6303_3866	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Cal6303_3867	PWY-5723	Rubisco shunt
Cal6303_3868	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Cal6303_3868	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Cal6303_3880	PWY-4061	glutathione-mediated detoxification I
Cal6303_3880	PWY-6842	glutathione-mediated detoxification II
Cal6303_3880	PWY-7112	4-hydroxy-2-nonenal detoxification
Cal6303_3880	PWY-7533	gliotoxin biosynthesis
Cal6303_3911	PWY-6167	flavin biosynthesis II (archaea)
Cal6303_3918	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_3918	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_3925	PWY-6936	seleno-amino acid biosynthesis
Cal6303_3941	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cal6303_3941	PWY-5723	Rubisco shunt
Cal6303_4000	PWY-5913	TCA cycle VI (obligate autotrophs)
Cal6303_4000	PWY-6549	L-glutamine biosynthesis III
Cal6303_4000	PWY-6728	methylaspartate cycle
Cal6303_4000	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cal6303_4000	PWY-7124	ethylene biosynthesis V (engineered)
Cal6303_4000	PWY-7254	TCA cycle VII (acetate-producers)
Cal6303_4000	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cal6303_4002	PWY-6840	homoglutathione biosynthesis
Cal6303_4002	PWY-7255	ergothioneine biosynthesis I (bacteria)
Cal6303_4009	PWY-6854	ethylene biosynthesis III (microbes)
Cal6303_4013	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_4013	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_4014	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_4014	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_4016	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_4016	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_4016	PWY-6901	superpathway of glucose and xylose degradation
Cal6303_4016	PWY-7003	glycerol degradation to butanol
Cal6303_4017	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Cal6303_4017	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Cal6303_4017	PWY-6896	thiamin salvage I
Cal6303_4017	PWY-6897	thiamin salvage II
Cal6303_4021	PWY-5915	phycoerythrobilin biosynthesis I
Cal6303_4026	PWY-5958	acridone alkaloid biosynthesis
Cal6303_4026	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cal6303_4026	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Cal6303_4027	PWY-7039	phosphatidate metabolism, as a signaling molecule
Cal6303_4051	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Cal6303_4062	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_4062	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_4074	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Cal6303_4100	PWY-5663	tetrahydrobiopterin biosynthesis I
Cal6303_4100	PWY-5664	tetrahydrobiopterin biosynthesis II
Cal6303_4100	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cal6303_4100	PWY-6703	preQ<sub>0</sub> biosynthesis
Cal6303_4100	PWY-6983	tetrahydrobiopterin biosynthesis III
Cal6303_4100	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Cal6303_4108	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Cal6303_4108	PWY-6174	mevalonate pathway II (archaea)
Cal6303_4108	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Cal6303_4108	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Cal6303_4108	PWY-7102	bisabolene biosynthesis
Cal6303_4108	PWY-7391	isoprene biosynthesis II (engineered)
Cal6303_4108	PWY-7524	mevalonate pathway III (archaea)
Cal6303_4108	PWY-7560	methylerythritol phosphate pathway II
Cal6303_4108	PWY-922	mevalonate pathway I
Cal6303_4111	PWY-6683	sulfate reduction III (assimilatory)
Cal6303_4133	PWY-7560	methylerythritol phosphate pathway II
Cal6303_4135	PWY-3821	galactose degradation III
Cal6303_4135	PWY-6317	galactose degradation I (Leloir pathway)
Cal6303_4135	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cal6303_4135	PWY-6527	stachyose degradation
Cal6303_4135	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cal6303_4135	PWY-7344	UDP-D-galactose biosynthesis
Cal6303_4138	PWY-5443	aminopropanol phosphate biosynthesis I
Cal6303_4156	PWY-2723	trehalose degradation V
Cal6303_4156	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cal6303_4156	PWY-5661	GDP-glucose biosynthesis
Cal6303_4156	PWY-7238	sucrose biosynthesis II
Cal6303_4156	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cal6303_4158	PWY-6823	molybdenum cofactor biosynthesis
Cal6303_4192	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Cal6303_4192	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Cal6303_4201	PWY-3781	aerobic respiration I (cytochrome c)
Cal6303_4201	PWY-4521	arsenite oxidation I (respiratory)
Cal6303_4201	PWY-6692	Fe(II) oxidation
Cal6303_4201	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cal6303_4213	PWY-6871	3-methylbutanol biosynthesis
Cal6303_4230	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Cal6303_4230	PWY-6167	flavin biosynthesis II (archaea)
Cal6303_4230	PWY-6168	flavin biosynthesis III (fungi)
Cal6303_4232	PWY-5381	pyridine nucleotide cycling (plants)
Cal6303_4232	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cal6303_4232	PWY-6596	adenosine nucleotides degradation I
Cal6303_4232	PWY-6606	guanosine nucleotides degradation II
Cal6303_4232	PWY-6607	guanosine nucleotides degradation I
Cal6303_4232	PWY-6608	guanosine nucleotides degradation III
Cal6303_4232	PWY-7185	UTP and CTP dephosphorylation I
Cal6303_4254	PWY-5941	glycogen degradation II (eukaryotic)
Cal6303_4254	PWY-622	starch biosynthesis
Cal6303_4254	PWY-6731	starch degradation III
Cal6303_4254	PWY-6737	starch degradation V
Cal6303_4254	PWY-7238	sucrose biosynthesis II
Cal6303_4255	PWY-622	starch biosynthesis
Cal6303_4271	PWY-5686	UMP biosynthesis
Cal6303_4295	PWY-5155	&beta;-alanine biosynthesis III
Cal6303_4299	PWY-5392	reductive TCA cycle II
Cal6303_4299	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cal6303_4299	PWY-5690	TCA cycle II (plants and fungi)
Cal6303_4299	PWY-5913	TCA cycle VI (obligate autotrophs)
Cal6303_4299	PWY-6728	methylaspartate cycle
Cal6303_4299	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cal6303_4299	PWY-7254	TCA cycle VII (acetate-producers)
Cal6303_4299	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cal6303_4312	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Cal6303_4314	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Cal6303_4317	PWY-4381	fatty acid biosynthesis initiation I
Cal6303_4317	PWY-5743	3-hydroxypropanoate cycle
Cal6303_4317	PWY-5744	glyoxylate assimilation
Cal6303_4317	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cal6303_4317	PWY-6679	jadomycin biosynthesis
Cal6303_4317	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cal6303_4320	PWY-5278	sulfite oxidation III
Cal6303_4320	PWY-5340	sulfate activation for sulfonation
Cal6303_4320	PWY-6683	sulfate reduction III (assimilatory)
Cal6303_4320	PWY-6932	selenate reduction
Cal6303_4365	PWY-5941	glycogen degradation II (eukaryotic)
Cal6303_4365	PWY-6724	starch degradation II
Cal6303_4365	PWY-6737	starch degradation V
Cal6303_4365	PWY-7238	sucrose biosynthesis II
Cal6303_4369	PWY-282	cuticular wax biosynthesis
Cal6303_4369	PWY-6622	heptadecane biosynthesis
Cal6303_4369	PWY-7032	alkane biosynthesis I
Cal6303_4370	PWY-6622	heptadecane biosynthesis
Cal6303_4370	PWY-7032	alkane biosynthesis I
Cal6303_4371	PWY-4381	fatty acid biosynthesis initiation I
Cal6303_4371	PWY-5743	3-hydroxypropanoate cycle
Cal6303_4371	PWY-5744	glyoxylate assimilation
Cal6303_4371	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cal6303_4371	PWY-6679	jadomycin biosynthesis
Cal6303_4371	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cal6303_4378	PWY-2301	<i>myo</i>-inositol biosynthesis
Cal6303_4378	PWY-4702	phytate degradation I
Cal6303_4378	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Cal6303_4393	PWY-5198	factor 420 biosynthesis
Cal6303_4410	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cal6303_4410	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cal6303_4410	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cal6303_4419	PWY-5269	cardiolipin biosynthesis II
Cal6303_4419	PWY-5668	cardiolipin biosynthesis I
Cal6303_4461	PWY-3821	galactose degradation III
Cal6303_4461	PWY-6317	galactose degradation I (Leloir pathway)
Cal6303_4461	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cal6303_4461	PWY-6527	stachyose degradation
Cal6303_4461	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cal6303_4461	PWY-7344	UDP-D-galactose biosynthesis
Cal6303_4466	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cal6303_4480	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Cal6303_4480	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Cal6303_4482	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Cal6303_4482	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Cal6303_4484	PWY-5791	1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
Cal6303_4484	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
Cal6303_4484	PWY-5901	2,3-dihydroxybenzoate biosynthesis
Cal6303_4484	PWY-6406	salicylate biosynthesis I
Cal6303_4491	PWY-3781	aerobic respiration I (cytochrome c)
Cal6303_4491	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Cal6303_4491	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cal6303_4491	PWY-5690	TCA cycle II (plants and fungi)
Cal6303_4491	PWY-6728	methylaspartate cycle
Cal6303_4491	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cal6303_4491	PWY-7254	TCA cycle VII (acetate-producers)
Cal6303_4491	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cal6303_4525	PWY-6700	queuosine biosynthesis
Cal6303_4533	PWY-5392	reductive TCA cycle II
Cal6303_4533	PWY-5537	pyruvate fermentation to acetate V
Cal6303_4533	PWY-5538	pyruvate fermentation to acetate VI
Cal6303_4533	PWY-5690	TCA cycle II (plants and fungi)
Cal6303_4533	PWY-5913	TCA cycle VI (obligate autotrophs)
Cal6303_4533	PWY-6728	methylaspartate cycle
Cal6303_4533	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cal6303_4533	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cal6303_4534	PWY-5392	reductive TCA cycle II
Cal6303_4534	PWY-5537	pyruvate fermentation to acetate V
Cal6303_4534	PWY-5538	pyruvate fermentation to acetate VI
Cal6303_4534	PWY-5690	TCA cycle II (plants and fungi)
Cal6303_4534	PWY-5913	TCA cycle VI (obligate autotrophs)
Cal6303_4534	PWY-6728	methylaspartate cycle
Cal6303_4534	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cal6303_4534	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cal6303_4555	PWY-5874	heme degradation
Cal6303_4555	PWY-5915	phycoerythrobilin biosynthesis I
Cal6303_4555	PWY-5917	phycocyanobilin biosynthesis
Cal6303_4555	PWY-7170	phytochromobilin biosynthesis
Cal6303_4556	PWY-6749	CMP-legionaminate biosynthesis I
Cal6303_4558	PWY-6502	oxidized GTP and dGTP detoxification
Cal6303_4566	PWY-101	photosynthesis light reactions
Cal6303_4566	PWY-6785	hydrogen production VIII
Cal6303_4567	PWY-101	photosynthesis light reactions
Cal6303_4567	PWY-6785	hydrogen production VIII
Cal6303_4580	PWY-4381	fatty acid biosynthesis initiation I
Cal6303_4581	PWY-4381	fatty acid biosynthesis initiation I
Cal6303_4581	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Cal6303_4581	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cal6303_4611	PWY-622	starch biosynthesis
Cal6303_4616	PWY-5941	glycogen degradation II (eukaryotic)
Cal6303_4616	PWY-6724	starch degradation II
Cal6303_4616	PWY-6737	starch degradation V
Cal6303_4616	PWY-7238	sucrose biosynthesis II
Cal6303_4628	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cal6303_4628	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cal6303_4628	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cal6303_4640	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Cal6303_4640	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Cal6303_4640	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Cal6303_4640	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Cal6303_4640	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Cal6303_4640	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Cal6303_4640	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Cal6303_4640	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Cal6303_4640	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Cal6303_4640	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Cal6303_4652	PWY-5316	nicotine biosynthesis
Cal6303_4652	PWY-7342	superpathway of nicotine biosynthesis
Cal6303_4660	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cal6303_4660	PWY-5686	UMP biosynthesis
Cal6303_4660	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cal6303_4689	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cal6303_4689	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cal6303_4689	PWY-6268	adenosylcobalamin salvage from cobalamin
Cal6303_4689	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cal6303_4692	PWY-2582	brassinosteroid biosynthesis II
Cal6303_4692	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Cal6303_4692	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Cal6303_4692	PWY-6948	sitosterol degradation to androstenedione
Cal6303_4692	PWY-699	brassinosteroid biosynthesis I
Cal6303_4692	PWY-7299	progesterone biosynthesis
Cal6303_4698	PWY-6703	preQ<sub>0</sub> biosynthesis
Cal6303_4704	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cal6303_4704	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cal6303_4704	PWY-6268	adenosylcobalamin salvage from cobalamin
Cal6303_4704	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cal6303_4707	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cal6303_4713	PWY-6823	molybdenum cofactor biosynthesis
Cal6303_4713	PWY-6891	thiazole biosynthesis II (Bacillus)
Cal6303_4713	PWY-6892	thiazole biosynthesis I (E. coli)
Cal6303_4713	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cal6303_4725	PWY-6012	acyl carrier protein metabolism I
Cal6303_4725	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cal6303_4728	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_4728	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cal6303_4728	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_4728	PWY-5723	Rubisco shunt
Cal6303_4728	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cal6303_4728	PWY-6886	1-butanol autotrophic biosynthesis
Cal6303_4728	PWY-6901	superpathway of glucose and xylose degradation
Cal6303_4728	PWY-7003	glycerol degradation to butanol
Cal6303_4728	PWY-7124	ethylene biosynthesis V (engineered)
Cal6303_4728	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Cal6303_4736	PWY-6123	inosine-5'-phosphate biosynthesis I
Cal6303_4736	PWY-6124	inosine-5'-phosphate biosynthesis II
Cal6303_4736	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_4736	PWY-7234	inosine-5'-phosphate biosynthesis III
Cal6303_4749	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_4749	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_4758	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cal6303_4758	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cal6303_4763	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cal6303_4763	PWY-5723	Rubisco shunt
Cal6303_4780	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_4788	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_4788	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_4803	PWY-4981	L-proline biosynthesis II (from arginine)
Cal6303_4838	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_4851	PWY-3781	aerobic respiration I (cytochrome c)
Cal6303_4851	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Cal6303_4851	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cal6303_4851	PWY-5690	TCA cycle II (plants and fungi)
Cal6303_4851	PWY-6728	methylaspartate cycle
Cal6303_4851	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cal6303_4851	PWY-7254	TCA cycle VII (acetate-producers)
Cal6303_4851	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cal6303_4879	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cal6303_4882	PWY-7158	L-phenylalanine degradation V
Cal6303_4885	PWY-6936	seleno-amino acid biosynthesis
Cal6303_4902	PWY-5194	siroheme biosynthesis
Cal6303_4902	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cal6303_4909	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_4909	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_4915	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cal6303_4936	PWY-6823	molybdenum cofactor biosynthesis
Cal6303_4936	PWY-6891	thiazole biosynthesis II (Bacillus)
Cal6303_4936	PWY-6892	thiazole biosynthesis I (E. coli)
Cal6303_4936	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cal6303_4948	PWY-5686	UMP biosynthesis
Cal6303_4974	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cal6303_4974	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cal6303_4974	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cal6303_4987	PWY-4981	L-proline biosynthesis II (from arginine)
Cal6303_4987	PWY-4984	urea cycle
Cal6303_4987	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cal6303_4994	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_4994	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_5001	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cal6303_5001	PWY-5723	Rubisco shunt
Cal6303_5001	PWY-6891	thiazole biosynthesis II (Bacillus)
Cal6303_5001	PWY-6892	thiazole biosynthesis I (E. coli)
Cal6303_5001	PWY-6901	superpathway of glucose and xylose degradation
Cal6303_5001	PWY-7560	methylerythritol phosphate pathway II
Cal6303_5003	PWY-1042	glycolysis IV (plant cytosol)
Cal6303_5003	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cal6303_5003	PWY-6901	superpathway of glucose and xylose degradation
Cal6303_5003	PWY-7003	glycerol degradation to butanol
Cal6303_5005	PWY-6475	<i>trans</i>-lycopene biosynthesis II (plants)
Cal6303_5010	PWY-7183	pyrimidine nucleobases salvage I
Cal6303_5018	PWY-5381	pyridine nucleotide cycling (plants)
Cal6303_5019	PWY-5381	pyridine nucleotide cycling (plants)
Cal6303_5019	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Cal6303_5027	PWY-5747	2-methylcitrate cycle II
Cal6303_5040	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Cal6303_5040	PWY-5389	3-methylthiopropanoate biosynthesis
Cal6303_5042	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Cal6303_5047	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_5047	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cal6303_5047	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cal6303_5047	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_5050	PWY-6167	flavin biosynthesis II (archaea)
Cal6303_5050	PWY-6168	flavin biosynthesis III (fungi)
Cal6303_5050	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_5061	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cal6303_5061	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cal6303_5097	PWY-5686	UMP biosynthesis
Cal6303_5131	PWY-5941	glycogen degradation II (eukaryotic)
Cal6303_5131	PWY-6724	starch degradation II
Cal6303_5131	PWY-6737	starch degradation V
Cal6303_5131	PWY-7238	sucrose biosynthesis II
Cal6303_5132	PWY-381	nitrate reduction II (assimilatory)
Cal6303_5132	PWY-5675	nitrate reduction V (assimilatory)
Cal6303_5132	PWY-6549	L-glutamine biosynthesis III
Cal6303_5132	PWY-6963	ammonia assimilation cycle I
Cal6303_5132	PWY-6964	ammonia assimilation cycle II
Cal6303_5137	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cal6303_5141	PWY-7052	cyanophycin metabolism
Cal6303_5142	PWY-7052	cyanophycin metabolism
Cal6303_5143	PWY-6829	tRNA methylation (yeast)
Cal6303_5143	PWY-7285	methylwyosine biosynthesis
Cal6303_5143	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Cal6303_5144	PWY-7560	methylerythritol phosphate pathway II
Cal6303_5149	PWY-5152	leucodelphinidin biosynthesis
Cal6303_5174	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cal6303_5174	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cal6303_5174	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Cal6303_5193	PWY-5530	sorbitol biosynthesis II
Cal6303_5193	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cal6303_5208	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cal6303_5222	PWY-4081	glutathione redox reactions I
Cal6303_5224	PWY-4061	glutathione-mediated detoxification I
Cal6303_5224	PWY-6842	glutathione-mediated detoxification II
Cal6303_5224	PWY-7112	4-hydroxy-2-nonenal detoxification
Cal6303_5224	PWY-7533	gliotoxin biosynthesis
Cal6303_5228	PWY-6749	CMP-legionaminate biosynthesis I
Cal6303_5232	PWY-4041	&gamma;-glutamyl cycle
Cal6303_5232	PWY-5826	hypoglycin biosynthesis
Cal6303_5233	PWY-6745	phytochelatins biosynthesis
Cal6303_5248	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Cal6303_5270	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Cal6303_5270	PWY-3162	L-tryptophan degradation V (side chain pathway)
Cal6303_5270	PWY-5057	L-valine degradation II
Cal6303_5270	PWY-5076	L-leucine degradation III
Cal6303_5270	PWY-5078	L-isoleucine degradation II
Cal6303_5270	PWY-5079	L-phenylalanine degradation III
Cal6303_5270	PWY-5082	L-methionine degradation III
Cal6303_5270	PWY-5480	pyruvate fermentation to ethanol I
Cal6303_5270	PWY-5486	pyruvate fermentation to ethanol II
Cal6303_5270	PWY-5751	phenylethanol biosynthesis
Cal6303_5270	PWY-6028	acetoin degradation
Cal6303_5270	PWY-6313	serotonin degradation
Cal6303_5270	PWY-6333	acetaldehyde biosynthesis I
Cal6303_5270	PWY-6342	noradrenaline and adrenaline degradation
Cal6303_5270	PWY-6587	pyruvate fermentation to ethanol III
Cal6303_5270	PWY-6802	salidroside biosynthesis
Cal6303_5270	PWY-6871	3-methylbutanol biosynthesis
Cal6303_5270	PWY-7013	L-1,2-propanediol degradation
Cal6303_5270	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cal6303_5270	PWY-7118	chitin degradation to ethanol
Cal6303_5270	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Cal6303_5270	PWY-7557	dehydrodiconiferyl alcohol degradation
Cal6303_5279	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cal6303_5279	PWY-6148	tetrahydromethanopterin biosynthesis
Cal6303_5279	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Cal6303_5279	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cal6303_5291	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cal6303_5291	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cal6303_5296	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_5303	PWY-2941	L-lysine biosynthesis II
Cal6303_5303	PWY-2942	L-lysine biosynthesis III
Cal6303_5303	PWY-5097	L-lysine biosynthesis VI
Cal6303_5315	PWY-5704	urea degradation II
Cal6303_5316	PWY-5704	urea degradation II
Cal6303_5332	PWY-5686	UMP biosynthesis
Cal6303_5335	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Cal6303_5335	PWY-622	starch biosynthesis
Cal6303_5346	PWY-7183	pyrimidine nucleobases salvage I
Cal6303_5351	PWY-6683	sulfate reduction III (assimilatory)
Cal6303_5354	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cal6303_5354	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cal6303_5354	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cal6303_5371	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cal6303_5407	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cal6303_5407	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cal6303_5407	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cal6303_5407	PWY-5994	palmitate biosynthesis I (animals and fungi)
Cal6303_5407	PWY-6113	superpathway of mycolate biosynthesis
Cal6303_5407	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cal6303_5407	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cal6303_5407	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cal6303_5407	PWYG-321	mycolate biosynthesis
Cal6303_5410	PWY-6123	inosine-5'-phosphate biosynthesis I
Cal6303_5410	PWY-6124	inosine-5'-phosphate biosynthesis II
Cal6303_5410	PWY-7234	inosine-5'-phosphate biosynthesis III
Cal6303_5482	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cal6303_5487	PWY-5068	chlorophyll cycle
Cal6303_5487	PWY-5086	chlorophyll <i>a</i> biosynthesis I
Cal6303_5497	PWY-5057	L-valine degradation II
Cal6303_5497	PWY-5076	L-leucine degradation III
Cal6303_5497	PWY-5078	L-isoleucine degradation II
Cal6303_5497	PWY-5101	L-isoleucine biosynthesis II
Cal6303_5497	PWY-5103	L-isoleucine biosynthesis III
Cal6303_5497	PWY-5104	L-isoleucine biosynthesis IV
Cal6303_5497	PWY-5108	L-isoleucine biosynthesis V
Cal6303_5509	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cal6303_5509	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cal6303_5509	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cal6303_5521	PWY-3801	sucrose degradation II (sucrose synthase)
Cal6303_5521	PWY-5054	sorbitol biosynthesis I
Cal6303_5521	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Cal6303_5521	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cal6303_5521	PWY-5659	GDP-mannose biosynthesis
Cal6303_5521	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cal6303_5521	PWY-621	sucrose degradation III (sucrose invertase)
Cal6303_5521	PWY-622	starch biosynthesis
Cal6303_5521	PWY-6531	mannitol cycle
Cal6303_5521	PWY-6981	chitin biosynthesis
Cal6303_5521	PWY-7238	sucrose biosynthesis II
Cal6303_5521	PWY-7347	sucrose biosynthesis III
Cal6303_5521	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cal6303_5541	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cal6303_5541	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cal6303_5541	PWY-6268	adenosylcobalamin salvage from cobalamin
Cal6303_5541	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cal6303_5573	PWY-3221	dTDP-L-rhamnose biosynthesis II
Cal6303_5573	PWY-6808	dTDP-D-forosamine biosynthesis
Cal6303_5573	PWY-6942	dTDP-D-desosamine biosynthesis
Cal6303_5573	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Cal6303_5573	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Cal6303_5573	PWY-6974	dTDP-L-olivose biosynthesis
Cal6303_5573	PWY-6976	dTDP-L-mycarose biosynthesis
Cal6303_5573	PWY-7104	dTDP-L-megosamine biosynthesis
Cal6303_5573	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Cal6303_5573	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Cal6303_5573	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Cal6303_5573	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Cal6303_5573	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Cal6303_5573	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Cal6303_5573	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Cal6303_5573	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Cal6303_5575	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_5575	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_5578	PWY-6871	3-methylbutanol biosynthesis
Cal6303_5587	PWY-3341	L-proline biosynthesis III
Cal6303_5587	PWY-4981	L-proline biosynthesis II (from arginine)
Cal6303_5587	PWY-6344	L-ornithine degradation II (Stickland reaction)
Cal6303_5589	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cal6303_5598	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cal6303_5598	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cal6303_5608	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)