CJSA_0013 PWY-5101 L-isoleucine biosynthesis II CJSA_0013 PWY-5103 L-isoleucine biosynthesis III CJSA_0013 PWY-5104 L-isoleucine biosynthesis IV CJSA_0013 PWY-7111 pyruvate fermentation to isobutanol (engineered) CJSA_0016 PWY-6703 preQ0 biosynthesis CJSA_0023 PWY-6123 inosine-5'-phosphate biosynthesis I CJSA_0023 PWY-6124 inosine-5'-phosphate biosynthesis II CJSA_0023 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_0023 PWY-7234 inosine-5'-phosphate biosynthesis III CJSA_0024 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III CJSA_0024 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I CJSA_0024 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV CJSA_0024 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP CJSA_0024 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II CJSA_0024 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II CJSA_0024 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I CJSA_0024 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis CJSA_0026 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III CJSA_0027 PWY-7176 UTP and CTP de novo biosynthesis CJSA_0027 PWY-7177 UTP and CTP dephosphorylation II CJSA_0027 PWY-7185 UTP and CTP dephosphorylation I CJSA_0059 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I CJSA_0059 PWY-6148 tetrahydromethanopterin biosynthesis CJSA_0059 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) CJSA_0059 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) CJSA_0060 PWY-6163 chorismate biosynthesis from 3-dehydroquinate CJSA_0060 PWY-6416 quinate degradation II CJSA_0060 PWY-6707 gallate biosynthesis CJSA_0076 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_0076 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_0078 PWY-5392 reductive TCA cycle II CJSA_0078 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation CJSA_0078 PWY-5690 TCA cycle II (plants and fungi) CJSA_0078 PWY-5913 TCA cycle VI (obligate autotrophs) CJSA_0078 PWY-6728 methylaspartate cycle CJSA_0078 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_0078 PWY-7254 TCA cycle VII (acetate-producers) CJSA_0078 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) CJSA_0090 PWY-6987 lipoate biosynthesis and incorporation III (Bacillus) CJSA_0090 PWY-7381 lipoate biosynthesis and incorporation (glycine cleavage system, yeast) CJSA_0096 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_0098 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_0107 PWY-4381 fatty acid biosynthesis initiation I CJSA_0107 PWY-6799 fatty acid biosynthesis (plant mitochondria) CJSA_0107 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) CJSA_0108 PWY-6151 S-adenosyl-L-methionine cycle I CJSA_0108 PWY-6153 autoinducer AI-2 biosynthesis I CJSA_0108 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) CJSA_0118 PWY-4381 fatty acid biosynthesis initiation I CJSA_0118 PWY-5743 3-hydroxypropanoate cycle CJSA_0118 PWY-5744 glyoxylate assimilation CJSA_0118 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle CJSA_0118 PWY-6679 jadomycin biosynthesis CJSA_0118 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) CJSA_0121 PWY-7303 3-dimethylallyl-4-hydroxybenzoate biosynthesis CJSA_0125 PWY-702 L-methionine biosynthesis II CJSA_0151 PWY-6703 preQ0 biosynthesis CJSA_0152 PWY-6823 molybdenum cofactor biosynthesis CJSA_0156 PWY-2781 cis-zeatin biosynthesis CJSA_0159 PWY-6854 ethylene biosynthesis III (microbes) CJSA_0177 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I CJSA_0177 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate CJSA_0178 PWY-6938 NADH repair CJSA_0184 PWY-5663 tetrahydrobiopterin biosynthesis I CJSA_0184 PWY-5664 tetrahydrobiopterin biosynthesis II CJSA_0184 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I CJSA_0184 PWY-6703 preQ0 biosynthesis CJSA_0184 PWY-6983 tetrahydrobiopterin biosynthesis III CJSA_0184 PWY-7442 drosopterin and aurodrosopterin biosynthesis CJSA_0185 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_0186 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I CJSA_0186 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II CJSA_0186 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis CJSA_0186 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) CJSA_0187 PWY-2941 L-lysine biosynthesis II CJSA_0187 PWY-2942 L-lysine biosynthesis III CJSA_0187 PWY-5097 L-lysine biosynthesis VI CJSA_0201 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) CJSA_0201 PWY-7400 L-arginine biosynthesis IV (archaebacteria) CJSA_0203 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) CJSA_0203 PWY-7400 L-arginine biosynthesis IV (archaebacteria) CJSA_0207 PWY-5381 pyridine nucleotide cycling (plants) CJSA_0208 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III CJSA_0208 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I CJSA_0208 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV CJSA_0208 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP CJSA_0208 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II CJSA_0208 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II CJSA_0208 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I CJSA_0208 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis CJSA_0210 PWY-5686 UMP biosynthesis CJSA_0214 PWY-241 C4 photosynthetic carbon assimilation cycle, NADP-ME type CJSA_0214 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) CJSA_0214 PWY-7115 C4 photosynthetic carbon assimilation cycle, NAD-ME type CJSA_0214 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type CJSA_0217 PWY-6823 molybdenum cofactor biosynthesis CJSA_0217 PWY-6891 thiazole biosynthesis II (Bacillus) CJSA_0217 PWY-6892 thiazole biosynthesis I (E. coli) CJSA_0217 PWY-7250 [2Fe-2S] iron-sulfur cluster biosynthesis CJSA_0234 PWY-7039 phosphatidate metabolism, as a signaling molecule CJSA_0236 PWY-5686 UMP biosynthesis CJSA_0246 PWY-5057 L-valine degradation II CJSA_0246 PWY-5076 L-leucine degradation III CJSA_0246 PWY-5078 L-isoleucine degradation II CJSA_0246 PWY-5101 L-isoleucine biosynthesis II CJSA_0246 PWY-5103 L-isoleucine biosynthesis III CJSA_0246 PWY-5104 L-isoleucine biosynthesis IV CJSA_0246 PWY-5108 L-isoleucine biosynthesis V CJSA_0250 PWY-5971 palmitate biosynthesis II (bacteria and plants) CJSA_0250 PWY-5973 cis-vaccenate biosynthesis CJSA_0250 PWY-5989 stearate biosynthesis II (bacteria and plants) CJSA_0250 PWY-5994 palmitate biosynthesis I (animals and fungi) CJSA_0250 PWY-6113 superpathway of mycolate biosynthesis CJSA_0250 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) CJSA_0250 PWY-6519 8-amino-7-oxononanoate biosynthesis I CJSA_0250 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) CJSA_0250 PWYG-321 mycolate biosynthesis CJSA_0255 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) CJSA_0255 PWY-5686 UMP biosynthesis CJSA_0255 PWY-7400 L-arginine biosynthesis IV (archaebacteria) CJSA_0257 PWY-1861 formaldehyde assimilation II (RuMP Cycle) CJSA_0257 PWY-5723 Rubisco shunt CJSA_0267 PWY-5381 pyridine nucleotide cycling (plants) CJSA_0267 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation CJSA_0267 PWY-6596 adenosine nucleotides degradation I CJSA_0267 PWY-6606 guanosine nucleotides degradation II CJSA_0267 PWY-6607 guanosine nucleotides degradation I CJSA_0267 PWY-6608 guanosine nucleotides degradation III CJSA_0267 PWY-7185 UTP and CTP dephosphorylation I CJSA_0270 PWY-5155 β-alanine biosynthesis III CJSA_0272 PWY-6654 phosphopantothenate biosynthesis III CJSA_0278 PWY-6519 8-amino-7-oxononanoate biosynthesis I CJSA_0282 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II CJSA_0288 PWY-2941 L-lysine biosynthesis II CJSA_0288 PWY-2942 L-lysine biosynthesis III CJSA_0288 PWY-5097 L-lysine biosynthesis VI CJSA_0290 PWY-3461 L-tyrosine biosynthesis II CJSA_0290 PWY-3462 L-phenylalanine biosynthesis II CJSA_0290 PWY-6120 L-tyrosine biosynthesis III CJSA_0290 PWY-6627 salinosporamide A biosynthesis CJSA_0290 PWY-7432 L-phenylalanine biosynthesis III (cytosolic, plants) CJSA_0295 PWY-6891 thiazole biosynthesis II (Bacillus) CJSA_0295 PWY-6892 thiazole biosynthesis I (E. coli) CJSA_0295 PWY-7560 methylerythritol phosphate pathway II CJSA_0298 PWY-5839 menaquinol-7 biosynthesis CJSA_0298 PWY-5844 menaquinol-9 biosynthesis CJSA_0298 PWY-5849 menaquinol-6 biosynthesis CJSA_0298 PWY-5890 menaquinol-10 biosynthesis CJSA_0298 PWY-5891 menaquinol-11 biosynthesis CJSA_0298 PWY-5892 menaquinol-12 biosynthesis CJSA_0298 PWY-5895 menaquinol-13 biosynthesis CJSA_0302 PWY-4381 fatty acid biosynthesis initiation I CJSA_0306 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III CJSA_0306 PWY-7176 UTP and CTP de novo biosynthesis CJSA_0306 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I CJSA_0306 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II CJSA_0306 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation CJSA_0306 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV CJSA_0306 PWY-7205 CMP phosphorylation CJSA_0306 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP CJSA_0306 PWY-7220 adenosine deoxyribonucleotides de novo biosynthesis II CJSA_0306 PWY-7221 guanosine ribonucleotides de novo biosynthesis CJSA_0306 PWY-7222 guanosine deoxyribonucleotides de novo biosynthesis II CJSA_0306 PWY-7224 purine deoxyribonucleosides salvage CJSA_0306 PWY-7226 guanosine deoxyribonucleotides de novo biosynthesis I CJSA_0306 PWY-7227 adenosine deoxyribonucleotides de novo biosynthesis CJSA_0319 PWY-5958 acridone alkaloid biosynthesis CJSA_0319 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis CJSA_0319 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis CJSA_0320 PWY-5958 acridone alkaloid biosynthesis CJSA_0320 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis CJSA_0320 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis CJSA_0330 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I CJSA_0330 PWY-6148 tetrahydromethanopterin biosynthesis CJSA_0330 PWY-6797 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea) CJSA_0330 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) CJSA_0333 PWY-6749 CMP-legionaminate biosynthesis I CJSA_0354 PWY-5686 UMP biosynthesis CJSA_0356 PWY-6167 flavin biosynthesis II (archaea) CJSA_0356 PWY-6168 flavin biosynthesis III (fungi) CJSA_0357 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I CJSA_0357 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) CJSA_0360 PWY-6163 chorismate biosynthesis from 3-dehydroquinate CJSA_0362 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) CJSA_0365 PWY-1042 glycolysis IV (plant cytosol) CJSA_0365 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) CJSA_0365 PWY-5484 glycolysis II (from fructose 6-phosphate) CJSA_0365 PWY-5723 Rubisco shunt CJSA_0365 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) CJSA_0365 PWY-6886 1-butanol autotrophic biosynthesis CJSA_0365 PWY-6901 superpathway of glucose and xylose degradation CJSA_0365 PWY-7003 glycerol degradation to butanol CJSA_0365 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) CJSA_0365 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) CJSA_0366 PWY-7254 TCA cycle VII (acetate-producers) CJSA_0367 PWY-3961 phosphopantothenate biosynthesis II CJSA_0375 PWY-1622 formaldehyde assimilation I (serine pathway) CJSA_0375 PWY-181 photorespiration CJSA_0375 PWY-2161 folate polyglutamylation CJSA_0375 PWY-2201 folate transformations I CJSA_0375 PWY-3661 glycine betaine degradation I CJSA_0375 PWY-3661-1 glycine betaine degradation II (mammalian) CJSA_0375 PWY-3841 folate transformations II CJSA_0375 PWY-5497 purine nucleobases degradation II (anaerobic) CJSA_0378 PWY-6163 chorismate biosynthesis from 3-dehydroquinate CJSA_0382 PWY-3781 aerobic respiration I (cytochrome c) CJSA_0382 PWY-4302 aerobic respiration III (alternative oxidase pathway) CJSA_0382 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation CJSA_0382 PWY-5690 TCA cycle II (plants and fungi) CJSA_0382 PWY-6728 methylaspartate cycle CJSA_0382 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_0382 PWY-7254 TCA cycle VII (acetate-producers) CJSA_0382 PWY-7279 aerobic respiration II (cytochrome c) (yeast) CJSA_0383 PWY-3781 aerobic respiration I (cytochrome c) CJSA_0383 PWY-4302 aerobic respiration III (alternative oxidase pathway) CJSA_0383 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation CJSA_0383 PWY-5690 TCA cycle II (plants and fungi) CJSA_0383 PWY-6728 methylaspartate cycle CJSA_0383 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_0383 PWY-7254 TCA cycle VII (acetate-producers) CJSA_0383 PWY-7279 aerobic respiration II (cytochrome c) (yeast) CJSA_0387 PWY-7165 L-ascorbate biosynthesis VI (engineered pathway) CJSA_0404 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_0404 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_0405 PWY-5265 peptidoglycan biosynthesis II (staphylococci) CJSA_0405 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) CJSA_0405 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) CJSA_0406 PWY-1042 glycolysis IV (plant cytosol) CJSA_0406 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) CJSA_0406 PWY-5484 glycolysis II (from fructose 6-phosphate) CJSA_0406 PWY-5723 Rubisco shunt CJSA_0406 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) CJSA_0406 PWY-6886 1-butanol autotrophic biosynthesis CJSA_0406 PWY-6901 superpathway of glucose and xylose degradation CJSA_0406 PWY-7003 glycerol degradation to butanol CJSA_0406 PWY-7124 ethylene biosynthesis V (engineered) CJSA_0406 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) CJSA_0407 PWY-5367 petroselinate biosynthesis CJSA_0407 PWY-5971 palmitate biosynthesis II (bacteria and plants) CJSA_0407 PWY-5973 cis-vaccenate biosynthesis CJSA_0407 PWY-5989 stearate biosynthesis II (bacteria and plants) CJSA_0407 PWY-5994 palmitate biosynthesis I (animals and fungi) CJSA_0407 PWY-6113 superpathway of mycolate biosynthesis CJSA_0407 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) CJSA_0407 PWY-6519 8-amino-7-oxononanoate biosynthesis I CJSA_0407 PWY-6951 CJSA_0407|fabG|YP_005655773.1|GeneID:12249258 CJSA_0407 PWY-7053 docosahexaenoate biosynthesis I (lower eukaryotes) CJSA_0407 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) CJSA_0407 PWYG-321 mycolate biosynthesis CJSA_0408 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) CJSA_0408 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) CJSA_0409 PWY-3781 aerobic respiration I (cytochrome c) CJSA_0409 PWY-4302 aerobic respiration III (alternative oxidase pathway) CJSA_0409 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation CJSA_0409 PWY-5690 TCA cycle II (plants and fungi) CJSA_0409 PWY-6728 methylaspartate cycle CJSA_0409 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_0409 PWY-7254 TCA cycle VII (acetate-producers) CJSA_0409 PWY-7279 aerobic respiration II (cytochrome c) (yeast) CJSA_0410 PWY-3781 aerobic respiration I (cytochrome c) CJSA_0410 PWY-4302 aerobic respiration III (alternative oxidase pathway) CJSA_0410 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation CJSA_0410 PWY-5690 TCA cycle II (plants and fungi) CJSA_0410 PWY-6728 methylaspartate cycle CJSA_0410 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_0410 PWY-7254 TCA cycle VII (acetate-producers) CJSA_0410 PWY-7279 aerobic respiration II (cytochrome c) (yeast) CJSA_0412 PWY-6899 base-degraded thiamin salvage CJSA_0412 PWY-7356 thiamin salvage IV (yeast) CJSA_0415 PWY-4381 fatty acid biosynthesis initiation I CJSA_0415 PWY-5743 3-hydroxypropanoate cycle CJSA_0415 PWY-5744 glyoxylate assimilation CJSA_0415 PWY-5789 3-hydroxypropanoate/4-hydroxybutanate cycle CJSA_0415 PWY-6679 jadomycin biosynthesis CJSA_0415 PWY-7388 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) CJSA_0421 PWY-1861 formaldehyde assimilation II (RuMP Cycle) CJSA_0421 PWY-5723 Rubisco shunt CJSA_0423 PWY-6890 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis CJSA_0432 PWY-5198 factor 420 biosynthesis CJSA_0451 PWY-2941 L-lysine biosynthesis II CJSA_0451 PWY-2942 L-lysine biosynthesis III CJSA_0451 PWY-5097 L-lysine biosynthesis VI CJSA_0482 PWY-6123 inosine-5'-phosphate biosynthesis I CJSA_0482 PWY-6124 inosine-5'-phosphate biosynthesis II CJSA_0482 PWY-7234 inosine-5'-phosphate biosynthesis III CJSA_0483 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I CJSA_0483 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II CJSA_0483 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis CJSA_0484 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I CJSA_0484 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II CJSA_0484 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis CJSA_0486 PWY-5667 CDP-diacylglycerol biosynthesis I CJSA_0486 PWY-5981 CDP-diacylglycerol biosynthesis III CJSA_0486 PWY-7411 superpathway of phosphatidate biosynthesis (yeast) CJSA_0486 PWY-7417 phospholipid remodeling (phosphatidate, yeast) CJSA_0498 PWY-5913 TCA cycle VI (obligate autotrophs) CJSA_0498 PWY-6549 L-glutamine biosynthesis III CJSA_0498 PWY-6728 methylaspartate cycle CJSA_0498 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_0498 PWY-7124 ethylene biosynthesis V (engineered) CJSA_0498 PWY-7254 TCA cycle VII (acetate-producers) CJSA_0498 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) CJSA_0500 PWY-5392 reductive TCA cycle II CJSA_0500 PWY-5537 pyruvate fermentation to acetate V CJSA_0500 PWY-5538 pyruvate fermentation to acetate VI CJSA_0500 PWY-5690 TCA cycle II (plants and fungi) CJSA_0500 PWY-5913 TCA cycle VI (obligate autotrophs) CJSA_0500 PWY-6728 methylaspartate cycle CJSA_0500 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_0500 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) CJSA_0501 PWY-5392 reductive TCA cycle II CJSA_0501 PWY-5537 pyruvate fermentation to acetate V CJSA_0501 PWY-5538 pyruvate fermentation to acetate VI CJSA_0501 PWY-5690 TCA cycle II (plants and fungi) CJSA_0501 PWY-5913 TCA cycle VI (obligate autotrophs) CJSA_0501 PWY-6728 methylaspartate cycle CJSA_0501 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_0501 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) CJSA_0509 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) CJSA_0512 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) CJSA_0512 PWY-5189 tetrapyrrole biosynthesis II (from glycine) CJSA_0540 PWY-6167 flavin biosynthesis II (archaea) CJSA_0540 PWY-6168 flavin biosynthesis III (fungi) CJSA_0540 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) CJSA_0542 PWY-5101 L-isoleucine biosynthesis II CJSA_0542 PWY-5103 L-isoleucine biosynthesis III CJSA_0542 PWY-5104 L-isoleucine biosynthesis IV CJSA_0542 PWY-5938 (R)-acetoin biosynthesis I CJSA_0542 PWY-5939 (R)-acetoin biosynthesis II CJSA_0542 PWY-6389 (S)-acetoin biosynthesis CJSA_0542 PWY-7111 pyruvate fermentation to isobutanol (engineered) CJSA_0543 PWY-5101 L-isoleucine biosynthesis II CJSA_0543 PWY-5103 L-isoleucine biosynthesis III CJSA_0543 PWY-5104 L-isoleucine biosynthesis IV CJSA_0543 PWY-5938 (R)-acetoin biosynthesis I CJSA_0543 PWY-5939 (R)-acetoin biosynthesis II CJSA_0543 PWY-6389 (S)-acetoin biosynthesis CJSA_0543 PWY-7111 pyruvate fermentation to isobutanol (engineered) CJSA_0545 PWY-6700 queuosine biosynthesis CJSA_0550 PWY-2941 L-lysine biosynthesis II CJSA_0550 PWY-2942 L-lysine biosynthesis III CJSA_0550 PWY-5097 L-lysine biosynthesis VI CJSA_0550 PWY-6559 spermidine biosynthesis II CJSA_0550 PWY-6562 norspermidine biosynthesis CJSA_0550 PWY-7153 grixazone biosynthesis CJSA_0553 PWY-6614 tetrahydrofolate biosynthesis CJSA_0557 PWY-5523 5,6-dimethylbenzimidazole biosynthesis CJSA_0557 PWY-6167 flavin biosynthesis II (archaea) CJSA_0557 PWY-6168 flavin biosynthesis III (fungi) CJSA_0565 PWY-1042 glycolysis IV (plant cytosol) CJSA_0565 PWY-1861 formaldehyde assimilation II (RuMP Cycle) CJSA_0565 PWY-5484 glycolysis II (from fructose 6-phosphate) CJSA_0565 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) CJSA_0565 PWY-7385 1,3-propanediol biosynthesis (engineered) CJSA_0599 PWY-5101 L-isoleucine biosynthesis II CJSA_0599 PWY-5103 L-isoleucine biosynthesis III CJSA_0599 PWY-5104 L-isoleucine biosynthesis IV CJSA_0599 PWY-7111 pyruvate fermentation to isobutanol (engineered) CJSA_0606 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_0608 PWY-5083 NAD/NADH phosphorylation and dephosphorylation CJSA_0608 PWY-7268 NAD/NADP-NADH/NADPH cytosolic interconversion (yeast) CJSA_0608 PWY-7269 NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast) CJSA_0614 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I CJSA_0614 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) CJSA_0630 PWY-4983 L-citrulline-nitric oxide cycle CJSA_0630 PWY-4984 urea cycle CJSA_0630 PWY-5 canavanine biosynthesis CJSA_0630 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) CJSA_0630 PWY-7400 L-arginine biosynthesis IV (archaebacteria) CJSA_0650 PWY-7560 methylerythritol phosphate pathway II CJSA_0652 PWY-1281 sulfoacetaldehyde degradation I CJSA_0652 PWY-5482 pyruvate fermentation to acetate II CJSA_0652 PWY-5485 pyruvate fermentation to acetate IV CJSA_0652 PWY-5497 purine nucleobases degradation II (anaerobic) CJSA_0652 PWY-6637 sulfolactate degradation II CJSA_0653 PWY-5482 pyruvate fermentation to acetate II CJSA_0653 PWY-5485 pyruvate fermentation to acetate IV CJSA_0653 PWY-5497 purine nucleobases degradation II (anaerobic) CJSA_0663 PWY-381 nitrate reduction II (assimilatory) CJSA_0663 PWY-5675 nitrate reduction V (assimilatory) CJSA_0663 PWY-6549 L-glutamine biosynthesis III CJSA_0663 PWY-6963 ammonia assimilation cycle I CJSA_0663 PWY-6964 ammonia assimilation cycle II CJSA_0666 PWY-6123 inosine-5'-phosphate biosynthesis I CJSA_0666 PWY-7234 inosine-5'-phosphate biosynthesis III CJSA_0669 PWY-5663 tetrahydrobiopterin biosynthesis I CJSA_0669 PWY-5664 tetrahydrobiopterin biosynthesis II CJSA_0669 PWY-6147 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I CJSA_0669 PWY-6703 preQ0 biosynthesis CJSA_0669 PWY-6983 tetrahydrobiopterin biosynthesis III CJSA_0669 PWY-7442 drosopterin and aurodrosopterin biosynthesis CJSA_0677 PWY-6829 tRNA methylation (yeast) CJSA_0677 PWY-7285 methylwyosine biosynthesis CJSA_0677 PWY-7286 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis CJSA_0679 PWY-5691 urate degradation to allantoin I CJSA_0679 PWY-7394 urate degradation to allantoin II CJSA_0680 PWY-6164 3-dehydroquinate biosynthesis I CJSA_0683 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) CJSA_0719 PWY-6936 seleno-amino acid biosynthesis CJSA_0719 PWY-7274 D-cycloserine biosynthesis CJSA_0720 PWY-40 putrescine biosynthesis I CJSA_0720 PWY-43 putrescine biosynthesis II CJSA_0720 PWY-6305 putrescine biosynthesis IV CJSA_0720 PWY-6834 spermidine biosynthesis III CJSA_0722 PWY-6545 pyrimidine deoxyribonucleotides de novo biosynthesis III CJSA_0722 PWY-7184 pyrimidine deoxyribonucleotides de novo biosynthesis I CJSA_0722 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II CJSA_0722 PWY-7197 pyrimidine deoxyribonucleotide phosphorylation CJSA_0722 PWY-7198 pyrimidine deoxyribonucleotides de novo biosynthesis IV CJSA_0722 PWY-7210 pyrimidine deoxyribonucleotides biosynthesis from CTP CJSA_0746 PWY-2201 folate transformations I CJSA_0746 PWY-5497 purine nucleobases degradation II (anaerobic) CJSA_0751 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_0751 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_0754 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_0754 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_0760 PWY-5686 UMP biosynthesis CJSA_0762 PWY-2941 L-lysine biosynthesis II CJSA_0762 PWY-2942 L-lysine biosynthesis III CJSA_0762 PWY-5097 L-lysine biosynthesis VI CJSA_0769 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I CJSA_0769 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) CJSA_0776 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II CJSA_0790 PWY-5747 2-methylcitrate cycle II CJSA_0795 PWY-5484 glycolysis II (from fructose 6-phosphate) CJSA_0800 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) CJSA_0802 PWY-5669 phosphatidylethanolamine biosynthesis I CJSA_0808 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) CJSA_0810 PWY-1722 formate reduction to 5,10-methylenetetrahydrofolate CJSA_0810 PWY-2201 folate transformations I CJSA_0810 PWY-3841 folate transformations II CJSA_0810 PWY-5030 L-histidine degradation III CJSA_0810 PWY-5497 purine nucleobases degradation II (anaerobic) CJSA_0810 PWY-6613 tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate CJSA_0812 PWY-6823 molybdenum cofactor biosynthesis CJSA_0813 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_0813 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_0815 PWY-5958 acridone alkaloid biosynthesis CJSA_0815 PWY-6660 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis CJSA_0815 PWY-6661 4-hydroxy-2(1H)-quinolone biosynthesis CJSA_0840 PWY-7560 methylerythritol phosphate pathway II CJSA_0841 PWY-6163 chorismate biosynthesis from 3-dehydroquinate CJSA_0851 PWY-7383 anaerobic energy metabolism (invertebrates, cytosol) CJSA_0857 PWY-6936 seleno-amino acid biosynthesis CJSA_0872 PWY-6605 adenine and adenosine salvage II CJSA_0872 PWY-6610 adenine and adenosine salvage IV CJSA_0874 PWY-5988 wound-induced proteolysis I CJSA_0874 PWY-6018 seed germination protein turnover CJSA_0876 PWY-4983 L-citrulline-nitric oxide cycle CJSA_0876 PWY-4984 urea cycle CJSA_0876 PWY-5 canavanine biosynthesis CJSA_0876 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) CJSA_0876 PWY-7400 L-arginine biosynthesis IV (archaebacteria) CJSA_0877 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation CJSA_0877 PWY-7117 C4 photosynthetic carbon assimilation cycle, PEPCK type CJSA_0894 PWY-43 putrescine biosynthesis II CJSA_0898 PWY-6123 inosine-5'-phosphate biosynthesis I CJSA_0898 PWY-6124 inosine-5'-phosphate biosynthesis II CJSA_0898 PWY-7234 inosine-5'-phosphate biosynthesis III CJSA_0900 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I CJSA_0900 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II CJSA_0900 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis CJSA_0937 PWY-4981 L-proline biosynthesis II (from arginine) CJSA_0937 PWY-4984 urea cycle CJSA_0937 PWY-7400 L-arginine biosynthesis IV (archaebacteria) CJSA_0938 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) CJSA_0938 PWY-5189 tetrapyrrole biosynthesis II (from glycine) CJSA_0939 PWY-6168 flavin biosynthesis III (fungi) CJSA_0939 PWY-7539 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) CJSA_0951 PWY-6164 3-dehydroquinate biosynthesis I CJSA_0953 PWY-6700 queuosine biosynthesis CJSA_0966 PWY-2941 L-lysine biosynthesis II CJSA_0966 PWY-2942 L-lysine biosynthesis III CJSA_0966 PWY-5097 L-lysine biosynthesis VI CJSA_0966 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) CJSA_0966 PWY-6559 spermidine biosynthesis II CJSA_0966 PWY-6562 norspermidine biosynthesis CJSA_0966 PWY-7153 grixazone biosynthesis CJSA_0966 PWY-7400 L-arginine biosynthesis IV (archaebacteria) CJSA_0982 PWY-5265 peptidoglycan biosynthesis II (staphylococci) CJSA_0982 PWY-6385 peptidoglycan biosynthesis III (mycobacteria) CJSA_0982 PWY-6470 peptidoglycan biosynthesis V (β-lactam resistance) CJSA_0982 PWY-6471 peptidoglycan biosynthesis IV (Enterococcus faecium) CJSA_0986 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) CJSA_0986 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) CJSA_0986 PWY-6897 thiamin salvage II CJSA_0986 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) CJSA_0986 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) CJSA_0986 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) CJSA_0986 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) CJSA_0987 PWY-6892 thiazole biosynthesis I (E. coli) CJSA_0987 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II CJSA_0988 PWY-6891 thiazole biosynthesis II (Bacillus) CJSA_0988 PWY-6892 thiazole biosynthesis I (E. coli) CJSA_0997 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_0997 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_1001 PWY-5695 urate biosynthesis/inosine 5'-phosphate degradation CJSA_1001 PWY-6596 adenosine nucleotides degradation I CJSA_1001 PWY-7221 guanosine ribonucleotides de novo biosynthesis CJSA_1002 PWY-5921 glutaminyl-tRNAgln biosynthesis via transamidation CJSA_1009 PWY-5269 cardiolipin biosynthesis II CJSA_1009 PWY-5668 cardiolipin biosynthesis I CJSA_1018 PWY-3341 L-proline biosynthesis III CJSA_1018 PWY-4981 L-proline biosynthesis II (from arginine) CJSA_1018 PWY-6344 L-ornithine degradation II (Stickland reaction) CJSA_1022 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) CJSA_1022 PWY-5189 tetrapyrrole biosynthesis II (from glycine) CJSA_1023 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) CJSA_1023 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) CJSA_1023 PWY-6897 thiamin salvage II CJSA_1023 PWY-6907 thiamin diphosphate biosynthesis III (Staphylococcus) CJSA_1023 PWY-6908 thiamin diphosphate biosynthesis IV (eukaryotes) CJSA_1023 PWY-7353 4-methyl-5(β-hydroxyethyl)thiazole salvage (yeast) CJSA_1023 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) CJSA_1024 PWY-6910 hydroxymethylpyrimidine salvage CJSA_1024 PWY-7356 thiamin salvage IV (yeast) CJSA_1024 PWY-7357 thiamin formation from pyrithiamine and oxythiamine (yeast) CJSA_1030 PWY-2161 folate polyglutamylation CJSA_1038 PWY-5041 S-adenosyl-L-methionine cycle II CJSA_1038 PWY-5912 2'-deoxymugineic acid phytosiderophore biosynthesis CJSA_1040 PWY-5686 UMP biosynthesis CJSA_1046 PWY-7560 methylerythritol phosphate pathway II CJSA_1056 PWY-5669 phosphatidylethanolamine biosynthesis I CJSA_1057 PWY-5669 phosphatidylethanolamine biosynthesis I CJSA_1073 PWY-3821 galactose degradation III CJSA_1073 PWY-6317 galactose degradation I (Leloir pathway) CJSA_1073 PWY-6397 mycolyl-arabinogalactan-peptidoglycan complex biosynthesis CJSA_1073 PWY-6527 stachyose degradation CJSA_1073 PWY-7328 superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis CJSA_1073 PWY-7344 UDP-D-galactose biosynthesis CJSA_1085 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I CJSA_1085 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) CJSA_1089 PWY-6478 GDP-D-glycero-α-D-manno-heptose biosynthesis CJSA_1096 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_1105 PWY-5481 pyruvate fermentation to lactate CJSA_1105 PWY-6901 superpathway of glucose and xylose degradation CJSA_1115 PWY-7221 guanosine ribonucleotides de novo biosynthesis CJSA_1124 PWY-3781 aerobic respiration I (cytochrome c) CJSA_1124 PWY-6692 Fe(II) oxidation CJSA_1124 PWY-7082 ammonia oxidation IV (autotrophic ammonia oxidizers) CJSA_1124 PWY-7279 aerobic respiration II (cytochrome c) (yeast) CJSA_1134 PWY-5667 CDP-diacylglycerol biosynthesis I CJSA_1134 PWY-5981 CDP-diacylglycerol biosynthesis III CJSA_1136 PWY-6151 S-adenosyl-L-methionine cycle I CJSA_1136 PWY-6153 autoinducer AI-2 biosynthesis I CJSA_1136 PWY-6154 autoinducer AI-2 biosynthesis II (Vibrio) CJSA_1139 PWY-5041 S-adenosyl-L-methionine cycle II CJSA_1139 PWY-6151 S-adenosyl-L-methionine cycle I CJSA_1139 PWY-6936 seleno-amino acid biosynthesis CJSA_1139 PWY-702 L-methionine biosynthesis II CJSA_1140 PWY-2201 folate transformations I CJSA_1140 PWY-3841 folate transformations II CJSA_1151 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_1151 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_1156 PWY-6167 flavin biosynthesis II (archaea) CJSA_1156 PWY-6168 flavin biosynthesis III (fungi) CJSA_1156 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_1181 PWY-5531 chlorophyllide a biosynthesis II (anaerobic) CJSA_1181 PWY-7159 chlorophyllide a biosynthesis III (aerobic, light independent) CJSA_1187 PWY-7221 guanosine ribonucleotides de novo biosynthesis CJSA_1189 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I CJSA_1189 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II CJSA_1189 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis CJSA_1209 PWY-723 alkylnitronates degradation CJSA_1224 PWY-7183 pyrimidine nucleobases salvage I CJSA_1226 PWY-5188 tetrapyrrole biosynthesis I (from glutamate) CJSA_1230 PWY-7187 pyrimidine deoxyribonucleotides de novo biosynthesis II CJSA_1231 PWY-6143 CMP-pseudaminate biosynthesis CJSA_1231 PWY-7330 UDP-N-acetyl-β-L-fucosamine biosynthesis CJSA_1231 PWY-7331 UDP-N-acetyl-β-L-quinovosamine biosynthesis CJSA_1231 PWY-7332 superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis CJSA_1241 PWY-4381 fatty acid biosynthesis initiation I CJSA_1249 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I CJSA_1249 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) CJSA_1249 PWY-6143 CMP-pseudaminate biosynthesis CJSA_1255 PWY-6143 CMP-pseudaminate biosynthesis CJSA_1263 PWY-6749 CMP-legionaminate biosynthesis I CJSA_1263 PWY-7131 CMP-legionaminate biosynthesis II CJSA_1267 PWY-1269 CMP-3-deoxy-D-manno-octulosonate biosynthesis I CJSA_1267 PWY-5111 CMP-3-deoxy-D-manno-octulosonate biosynthesis II (from D-arabinose 5-phosphate) CJSA_1281 PWY-7560 methylerythritol phosphate pathway II CJSA_1285 PWY-5964 guanylyl molybdenum cofactor biosynthesis CJSA_1286 PWY-6803 phosphatidylcholine acyl editing CJSA_1286 PWY-7409 phospholipid remodeling (phosphatidylethanolamine, yeast) CJSA_1286 PWY-7416 phospholipid remodeling (phosphatidylcholine, yeast) CJSA_1286 PWY-7417 phospholipid remodeling (phosphatidate, yeast) CJSA_1292 PWY-5674 nitrate reduction IV (dissimilatory) CJSA_1298 PWY-5392 reductive TCA cycle II CJSA_1298 PWY-561 superpathway of glyoxylate cycle and fatty acid degradation CJSA_1298 PWY-5690 TCA cycle II (plants and fungi) CJSA_1298 PWY-5913 TCA cycle VI (obligate autotrophs) CJSA_1298 PWY-6728 methylaspartate cycle CJSA_1298 PWY-6969 TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) CJSA_1298 PWY-7254 TCA cycle VII (acetate-producers) CJSA_1298 PWY-7384 anaerobic energy metabolism (invertebrates, mitochondrial) CJSA_1300 PWY-6749 CMP-legionaminate biosynthesis I CJSA_1302 PWY-5198 factor 420 biosynthesis CJSA_1302 PWY-7371 1,4-dihydroxy-6-naphthoate biosynthesis II CJSA_1302 PWY-7374 1,4-dihydroxy-6-naphthoate biosynthesis I CJSA_1308 PWY-7206 pyrimidine deoxyribonucleotides dephosphorylation CJSA_1319 PWY-5506 methanol oxidation to formaldehyde IV CJSA_1326 PWY-6123 inosine-5'-phosphate biosynthesis I CJSA_1326 PWY-6124 inosine-5'-phosphate biosynthesis II CJSA_1326 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_1326 PWY-7234 inosine-5'-phosphate biosynthesis III CJSA_1331 PWY-5971 palmitate biosynthesis II (bacteria and plants) CJSA_1331 PWY-5973 cis-vaccenate biosynthesis CJSA_1331 PWY-5989 stearate biosynthesis II (bacteria and plants) CJSA_1331 PWY-6113 superpathway of mycolate biosynthesis CJSA_1331 PWY-6282 palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) CJSA_1331 PWY-6519 8-amino-7-oxononanoate biosynthesis I CJSA_1331 PWY-7096 triclosan resistance CJSA_1331 PWYG-321 mycolate biosynthesis CJSA_1332 PWY-1042 glycolysis IV (plant cytosol) CJSA_1332 PWY-5484 glycolysis II (from fructose 6-phosphate) CJSA_1332 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) CJSA_1332 PWY-7003 glycerol degradation to butanol CJSA_1333 PWY-1042 glycolysis IV (plant cytosol) CJSA_1333 PWY-5484 glycolysis II (from fructose 6-phosphate) CJSA_1333 PWY-6886 1-butanol autotrophic biosynthesis CJSA_1333 PWY-6901 superpathway of glucose and xylose degradation CJSA_1333 PWY-7003 glycerol degradation to butanol CJSA_1334 PWY-1042 glycolysis IV (plant cytosol) CJSA_1334 PWY-5484 glycolysis II (from fructose 6-phosphate) CJSA_1334 PWY-6901 superpathway of glucose and xylose degradation CJSA_1334 PWY-7003 glycerol degradation to butanol CJSA_1335 PWY-5381 pyridine nucleotide cycling (plants) CJSA_1335 PWY-5653 NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde CJSA_1338 PWY-6749 CMP-legionaminate biosynthesis I CJSA_1340 PWY-6012 acyl carrier protein metabolism I CJSA_1340 PWY-6012-1 acyl carrier protein metabolism II (mammalian) CJSA_1346 PWY-5340 sulfate activation for sulfonation CJSA_1346 PWY-6163 chorismate biosynthesis from 3-dehydroquinate CJSA_1382 PWY-6893 thiamin diphosphate biosynthesis II (Bacillus) CJSA_1382 PWY-6894 thiamin diphosphate biosynthesis I (E. coli) CJSA_1382 PWY-6896 thiamin salvage I CJSA_1382 PWY-6897 thiamin salvage II CJSA_1412 PWY-3781 aerobic respiration I (cytochrome c) CJSA_1412 PWY-4521 arsenite oxidation I (respiratory) CJSA_1412 PWY-6692 Fe(II) oxidation CJSA_1412 PWY-7279 aerobic respiration II (cytochrome c) (yeast) CJSA_1413 PWY-3781 aerobic respiration I (cytochrome c) CJSA_1413 PWY-4521 arsenite oxidation I (respiratory) CJSA_1413 PWY-6692 Fe(II) oxidation CJSA_1413 PWY-7279 aerobic respiration II (cytochrome c) (yeast) CJSA_1417 PWY-5154 L-arginine biosynthesis III (via N-acetyl-L-citrulline) CJSA_1417 PWY-5686 UMP biosynthesis CJSA_1417 PWY-7400 L-arginine biosynthesis IV (archaebacteria) CJSA_1421 PWY-7219 adenosine ribonucleotides de novo biosynthesis CJSA_1425 PWY-5737 (5R)-carbapenem carboxylate biosynthesis CJSA_1425 PWY-6853 ethylene biosynthesis II (microbes) CJSA_1425 PWY-6922 L-Nδ-acetylornithine biosynthesis CJSA_1426 PWY-6281 L-selenocysteine biosynthesis II (archaea and eukaryotes) CJSA_1436 PWY-6562 norspermidine biosynthesis CJSA_1439 PWY-6823 molybdenum cofactor biosynthesis CJSA_1440 PWY-6823 molybdenum cofactor biosynthesis CJSA_1445 PWY-6121 5-aminoimidazole ribonucleotide biosynthesis I CJSA_1445 PWY-6122 5-aminoimidazole ribonucleotide biosynthesis II CJSA_1445 PWY-6277 superpathway of 5-aminoimidazole ribonucleotide biosynthesis CJSA_1447 PWY-2941 L-lysine biosynthesis II CJSA_1447 PWY-5097 L-lysine biosynthesis VI CJSA_1451 PWY-3801 sucrose degradation II (sucrose synthase) CJSA_1451 PWY-5054 sorbitol biosynthesis I CJSA_1451 PWY-5384 sucrose degradation IV (sucrose phosphorylase) CJSA_1451 PWY-5514 UDP-N-acetyl-D-galactosamine biosynthesis II CJSA_1451 PWY-5659 GDP-mannose biosynthesis CJSA_1451 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) CJSA_1451 PWY-621 sucrose degradation III (sucrose invertase) CJSA_1451 PWY-622 starch biosynthesis CJSA_1451 PWY-6531 mannitol cycle CJSA_1451 PWY-6981 chitin biosynthesis CJSA_1451 PWY-7238 sucrose biosynthesis II CJSA_1451 PWY-7347 sucrose biosynthesis III CJSA_1451 PWY-7385 1,3-propanediol biosynthesis (engineered) CJSA_1452 PWY-3801 sucrose degradation II (sucrose synthase) CJSA_1452 PWY-6527 stachyose degradation CJSA_1452 PWY-6981 chitin biosynthesis CJSA_1452 PWY-7238 sucrose biosynthesis II CJSA_1452 PWY-7343 UDP-glucose biosynthesis CJSA_1453 PWY-6672 cis-genanyl-CoA degradation CJSA_1453 PWY-7118 chitin degradation to ethanol CJSA_1497 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_1497 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_1519 PWY-7560 methylerythritol phosphate pathway II CJSA_1521 PWY-5278 sulfite oxidation III CJSA_1521 PWY-5340 sulfate activation for sulfonation CJSA_1521 PWY-6683 sulfate reduction III (assimilatory) CJSA_1521 PWY-6932 selenate reduction CJSA_1522 PWY-5269 cardiolipin biosynthesis II CJSA_1522 PWY-5668 cardiolipin biosynthesis I CJSA_1525 PWY-7204 pyridoxal 5'-phosphate salvage II (plants) CJSA_1525 PWY-7282 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) CJSA_1546 PWY-6163 chorismate biosynthesis from 3-dehydroquinate CJSA_1557 PWY-1861 formaldehyde assimilation II (RuMP Cycle) CJSA_1557 PWY-5723 Rubisco shunt CJSA_1557 PWY-6891 thiazole biosynthesis II (Bacillus) CJSA_1557 PWY-6892 thiazole biosynthesis I (E. coli) CJSA_1557 PWY-6901 superpathway of glucose and xylose degradation CJSA_1557 PWY-7560 methylerythritol phosphate pathway II CJSA_1564 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_1564 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_1583 PWY-1042 glycolysis IV (plant cytosol) CJSA_1583 PWY-1622 formaldehyde assimilation I (serine pathway) CJSA_1583 PWY-2221 Entner-Doudoroff pathway III (semi-phosphorylative) CJSA_1583 PWY-5484 glycolysis II (from fructose 6-phosphate) CJSA_1583 PWY-5723 Rubisco shunt CJSA_1583 PWY-6142 gluconeogenesis II (Methanobacterium thermoautotrophicum) CJSA_1583 PWY-6886 1-butanol autotrophic biosynthesis CJSA_1583 PWY-6901 superpathway of glucose and xylose degradation CJSA_1583 PWY-7003 glycerol degradation to butanol CJSA_1583 PWY-7124 ethylene biosynthesis V (engineered) CJSA_1583 PWY-7218 photosynthetic 3-hydroxybutanoate biosynthesis (engineered) CJSA_1587 PWY-6386 UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) CJSA_1587 PWY-6387 UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) CJSA_1594 PWY-7380 biotin biosynthesis from 8-amino-7-oxononanoate II CJSA_1627 PWY-7396 butanol and isobutanol biosynthesis (engineered) CJSA_1628 PWY-6871 3-methylbutanol biosynthesis CJSA_1631 PWY-6700 queuosine biosynthesis