CJE0012	PWY-5101	L-isoleucine biosynthesis II
CJE0012	PWY-5103	L-isoleucine biosynthesis III
CJE0012	PWY-5104	L-isoleucine biosynthesis IV
CJE0012	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CJE0016	PWY-6703	preQ<sub>0</sub> biosynthesis
CJE0023	PWY-6123	inosine-5'-phosphate biosynthesis I
CJE0023	PWY-6124	inosine-5'-phosphate biosynthesis II
CJE0023	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE0023	PWY-7234	inosine-5'-phosphate biosynthesis III
CJE0024	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJE0024	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJE0024	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CJE0024	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CJE0024	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE0024	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE0024	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJE0024	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CJE0026	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJE0027	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CJE0027	PWY-7177	UTP and CTP dephosphorylation II
CJE0027	PWY-7185	UTP and CTP dephosphorylation I
CJE0062	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CJE0062	PWY-6148	tetrahydromethanopterin biosynthesis
CJE0062	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CJE0062	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CJE0063	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJE0063	PWY-6416	quinate degradation II
CJE0063	PWY-6707	gallate biosynthesis
CJE0080	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE0080	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE0082	PWY-5392	reductive TCA cycle II
CJE0082	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJE0082	PWY-5690	TCA cycle II (plants and fungi)
CJE0082	PWY-5913	TCA cycle VI (obligate autotrophs)
CJE0082	PWY-6728	methylaspartate cycle
CJE0082	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE0082	PWY-7254	TCA cycle VII (acetate-producers)
CJE0082	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CJE0094	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CJE0094	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CJE0100	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE0102	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE0111	PWY-4381	fatty acid biosynthesis initiation I
CJE0111	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CJE0111	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJE0112	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CJE0112	PWY-6153	autoinducer AI-2 biosynthesis I
CJE0112	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CJE0122	PWY-4381	fatty acid biosynthesis initiation I
CJE0122	PWY-5743	3-hydroxypropanoate cycle
CJE0122	PWY-5744	glyoxylate assimilation
CJE0122	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CJE0122	PWY-6679	jadomycin biosynthesis
CJE0122	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJE0125	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CJE0129	PWY-702	L-methionine biosynthesis II
CJE0156	PWY-6703	preQ<sub>0</sub> biosynthesis
CJE0157	PWY-6823	molybdenum cofactor biosynthesis
CJE0161	PWY-2781	<i>cis</i>-zeatin biosynthesis
CJE0164	PWY-6854	ethylene biosynthesis III (microbes)
CJE0180	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJE0180	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CJE0181	PWY-6938	NADH repair
CJE0187	PWY-5663	tetrahydrobiopterin biosynthesis I
CJE0187	PWY-5664	tetrahydrobiopterin biosynthesis II
CJE0187	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CJE0187	PWY-6703	preQ<sub>0</sub> biosynthesis
CJE0187	PWY-6983	tetrahydrobiopterin biosynthesis III
CJE0187	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CJE0188	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE0189	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJE0189	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJE0189	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJE0189	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CJE0190	PWY-2941	L-lysine biosynthesis II
CJE0190	PWY-2942	L-lysine biosynthesis III
CJE0190	PWY-5097	L-lysine biosynthesis VI
CJE0241	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CJE0275	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJE0275	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJE0277	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJE0277	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJE0281	PWY-5381	pyridine nucleotide cycling (plants)
CJE0282	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJE0282	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJE0282	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CJE0282	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CJE0282	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE0282	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE0282	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJE0282	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CJE0284	PWY-5686	UMP biosynthesis
CJE0288	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CJE0288	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJE0288	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CJE0288	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CJE0291	PWY-6823	molybdenum cofactor biosynthesis
CJE0291	PWY-6891	thiazole biosynthesis II (Bacillus)
CJE0291	PWY-6892	thiazole biosynthesis I (E. coli)
CJE0291	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CJE0307	PWY-7039	phosphatidate metabolism, as a signaling molecule
CJE0309	PWY-5686	UMP biosynthesis
CJE0318	PWY-5057	L-valine degradation II
CJE0318	PWY-5076	L-leucine degradation III
CJE0318	PWY-5078	L-isoleucine degradation II
CJE0318	PWY-5101	L-isoleucine biosynthesis II
CJE0318	PWY-5103	L-isoleucine biosynthesis III
CJE0318	PWY-5104	L-isoleucine biosynthesis IV
CJE0318	PWY-5108	L-isoleucine biosynthesis V
CJE0322	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CJE0322	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CJE0322	PWY-5989	stearate biosynthesis II (bacteria and plants)
CJE0322	PWY-5994	palmitate biosynthesis I (animals and fungi)
CJE0322	PWY-6113	superpathway of mycolate biosynthesis
CJE0322	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CJE0322	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CJE0322	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJE0322	PWYG-321	mycolate biosynthesis
CJE0327	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJE0327	PWY-5686	UMP biosynthesis
CJE0327	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJE0329	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CJE0329	PWY-5723	Rubisco shunt
CJE0339	PWY-5381	pyridine nucleotide cycling (plants)
CJE0339	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CJE0339	PWY-6596	adenosine nucleotides degradation I
CJE0339	PWY-6606	guanosine nucleotides degradation II
CJE0339	PWY-6607	guanosine nucleotides degradation I
CJE0339	PWY-6608	guanosine nucleotides degradation III
CJE0339	PWY-7185	UTP and CTP dephosphorylation I
CJE0341	PWY-5155	&beta;-alanine biosynthesis III
CJE0343	PWY-6654	phosphopantothenate biosynthesis III
CJE0349	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CJE0353	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CJE0359	PWY-2941	L-lysine biosynthesis II
CJE0359	PWY-2942	L-lysine biosynthesis III
CJE0359	PWY-5097	L-lysine biosynthesis VI
CJE0361	PWY-3461	L-tyrosine biosynthesis II
CJE0361	PWY-3462	L-phenylalanine biosynthesis II
CJE0361	PWY-6120	L-tyrosine biosynthesis III
CJE0361	PWY-6627	salinosporamide A biosynthesis
CJE0361	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CJE0366	PWY-6891	thiazole biosynthesis II (Bacillus)
CJE0366	PWY-6892	thiazole biosynthesis I (E. coli)
CJE0366	PWY-7560	methylerythritol phosphate pathway II
CJE0369	PWY-5839	menaquinol-7 biosynthesis
CJE0369	PWY-5844	menaquinol-9 biosynthesis
CJE0369	PWY-5849	menaquinol-6 biosynthesis
CJE0369	PWY-5890	menaquinol-10 biosynthesis
CJE0369	PWY-5891	menaquinol-11 biosynthesis
CJE0369	PWY-5892	menaquinol-12 biosynthesis
CJE0369	PWY-5895	menaquinol-13 biosynthesis
CJE0373	PWY-4381	fatty acid biosynthesis initiation I
CJE0377	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJE0377	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CJE0377	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJE0377	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE0377	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CJE0377	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CJE0377	PWY-7205	CMP phosphorylation
CJE0377	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CJE0377	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE0377	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CJE0377	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE0377	PWY-7224	purine deoxyribonucleosides salvage
CJE0377	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJE0377	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CJE0394	PWY-5958	acridone alkaloid biosynthesis
CJE0394	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CJE0394	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CJE0395	PWY-5958	acridone alkaloid biosynthesis
CJE0395	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CJE0395	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CJE0405	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CJE0405	PWY-6148	tetrahydromethanopterin biosynthesis
CJE0405	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CJE0405	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CJE0409	PWY-6749	CMP-legionaminate biosynthesis I
CJE0430	PWY-5686	UMP biosynthesis
CJE0432	PWY-6167	flavin biosynthesis II (archaea)
CJE0432	PWY-6168	flavin biosynthesis III (fungi)
CJE0433	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJE0433	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJE0436	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJE0438	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CJE0441	PWY-1042	glycolysis IV (plant cytosol)
CJE0441	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CJE0441	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJE0441	PWY-5723	Rubisco shunt
CJE0441	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJE0441	PWY-6886	1-butanol autotrophic biosynthesis
CJE0441	PWY-6901	superpathway of glucose and xylose degradation
CJE0441	PWY-7003	glycerol degradation to butanol
CJE0441	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CJE0441	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CJE0442	PWY-7254	TCA cycle VII (acetate-producers)
CJE0443	PWY-3961	phosphopantothenate biosynthesis II
CJE0451	PWY-1622	formaldehyde assimilation I (serine pathway)
CJE0451	PWY-181	photorespiration
CJE0451	PWY-2161	folate polyglutamylation
CJE0451	PWY-2201	folate transformations I
CJE0451	PWY-3661	glycine betaine degradation I
CJE0451	PWY-3661-1	glycine betaine degradation II (mammalian)
CJE0451	PWY-3841	folate transformations II
CJE0451	PWY-5497	purine nucleobases degradation II (anaerobic)
CJE0454	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJE0458	PWY-3781	aerobic respiration I (cytochrome c)
CJE0458	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CJE0458	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJE0458	PWY-5690	TCA cycle II (plants and fungi)
CJE0458	PWY-6728	methylaspartate cycle
CJE0458	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE0458	PWY-7254	TCA cycle VII (acetate-producers)
CJE0458	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJE0459	PWY-3781	aerobic respiration I (cytochrome c)
CJE0459	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CJE0459	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJE0459	PWY-5690	TCA cycle II (plants and fungi)
CJE0459	PWY-6728	methylaspartate cycle
CJE0459	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE0459	PWY-7254	TCA cycle VII (acetate-producers)
CJE0459	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJE0463	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
CJE0482	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE0482	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE0483	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CJE0483	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CJE0483	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CJE0484	PWY-1042	glycolysis IV (plant cytosol)
CJE0484	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CJE0484	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJE0484	PWY-5723	Rubisco shunt
CJE0484	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJE0484	PWY-6886	1-butanol autotrophic biosynthesis
CJE0484	PWY-6901	superpathway of glucose and xylose degradation
CJE0484	PWY-7003	glycerol degradation to butanol
CJE0484	PWY-7124	ethylene biosynthesis V (engineered)
CJE0484	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CJE0485	PWY-5367	petroselinate biosynthesis
CJE0485	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CJE0485	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CJE0485	PWY-5989	stearate biosynthesis II (bacteria and plants)
CJE0485	PWY-5994	palmitate biosynthesis I (animals and fungi)
CJE0485	PWY-6113	superpathway of mycolate biosynthesis
CJE0485	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CJE0485	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CJE0485	PWY-6951	CJE0485|fabG|YP_178504.1|GeneID:3231246
CJE0485	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CJE0485	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJE0485	PWYG-321	mycolate biosynthesis
CJE0486	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CJE0486	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CJE0488	PWY-3781	aerobic respiration I (cytochrome c)
CJE0488	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CJE0488	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJE0488	PWY-5690	TCA cycle II (plants and fungi)
CJE0488	PWY-6728	methylaspartate cycle
CJE0488	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE0488	PWY-7254	TCA cycle VII (acetate-producers)
CJE0488	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJE0489	PWY-3781	aerobic respiration I (cytochrome c)
CJE0489	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CJE0489	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJE0489	PWY-5690	TCA cycle II (plants and fungi)
CJE0489	PWY-6728	methylaspartate cycle
CJE0489	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE0489	PWY-7254	TCA cycle VII (acetate-producers)
CJE0489	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJE0491	PWY-6899	base-degraded thiamin salvage
CJE0491	PWY-7356	thiamin salvage IV (yeast)
CJE0495	PWY-4381	fatty acid biosynthesis initiation I
CJE0495	PWY-5743	3-hydroxypropanoate cycle
CJE0495	PWY-5744	glyoxylate assimilation
CJE0495	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CJE0495	PWY-6679	jadomycin biosynthesis
CJE0495	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJE0501	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CJE0501	PWY-5723	Rubisco shunt
CJE0503	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CJE0512	PWY-5198	factor 420 biosynthesis
CJE0532	PWY-2941	L-lysine biosynthesis II
CJE0532	PWY-2942	L-lysine biosynthesis III
CJE0532	PWY-5097	L-lysine biosynthesis VI
CJE0563	PWY-6854	ethylene biosynthesis III (microbes)
CJE0619	PWY-6123	inosine-5'-phosphate biosynthesis I
CJE0619	PWY-6124	inosine-5'-phosphate biosynthesis II
CJE0619	PWY-7234	inosine-5'-phosphate biosynthesis III
CJE0620	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJE0620	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJE0620	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJE0621	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJE0621	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJE0621	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJE0623	PWY-5667	CDP-diacylglycerol biosynthesis I
CJE0623	PWY-5981	CDP-diacylglycerol biosynthesis III
CJE0623	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CJE0623	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CJE0635	PWY-5913	TCA cycle VI (obligate autotrophs)
CJE0635	PWY-6549	L-glutamine biosynthesis III
CJE0635	PWY-6728	methylaspartate cycle
CJE0635	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE0635	PWY-7124	ethylene biosynthesis V (engineered)
CJE0635	PWY-7254	TCA cycle VII (acetate-producers)
CJE0635	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CJE0637	PWY-5392	reductive TCA cycle II
CJE0637	PWY-5537	pyruvate fermentation to acetate V
CJE0637	PWY-5538	pyruvate fermentation to acetate VI
CJE0637	PWY-5690	TCA cycle II (plants and fungi)
CJE0637	PWY-5913	TCA cycle VI (obligate autotrophs)
CJE0637	PWY-6728	methylaspartate cycle
CJE0637	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE0637	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CJE0638	PWY-5392	reductive TCA cycle II
CJE0638	PWY-5537	pyruvate fermentation to acetate V
CJE0638	PWY-5538	pyruvate fermentation to acetate VI
CJE0638	PWY-5690	TCA cycle II (plants and fungi)
CJE0638	PWY-5913	TCA cycle VI (obligate autotrophs)
CJE0638	PWY-6728	methylaspartate cycle
CJE0638	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE0638	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CJE0646	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJE0649	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJE0649	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CJE0675	PWY-6167	flavin biosynthesis II (archaea)
CJE0675	PWY-6168	flavin biosynthesis III (fungi)
CJE0675	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CJE0677	PWY-5101	L-isoleucine biosynthesis II
CJE0677	PWY-5103	L-isoleucine biosynthesis III
CJE0677	PWY-5104	L-isoleucine biosynthesis IV
CJE0677	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CJE0677	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CJE0677	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CJE0677	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CJE0678	PWY-5101	L-isoleucine biosynthesis II
CJE0678	PWY-5103	L-isoleucine biosynthesis III
CJE0678	PWY-5104	L-isoleucine biosynthesis IV
CJE0678	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CJE0678	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CJE0678	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CJE0678	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CJE0680	PWY-6700	queuosine biosynthesis
CJE0685	PWY-2941	L-lysine biosynthesis II
CJE0685	PWY-2942	L-lysine biosynthesis III
CJE0685	PWY-5097	L-lysine biosynthesis VI
CJE0685	PWY-6559	spermidine biosynthesis II
CJE0685	PWY-6562	norspermidine biosynthesis
CJE0685	PWY-7153	grixazone biosynthesis
CJE0688	PWY-6614	tetrahydrofolate biosynthesis
CJE0692	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CJE0692	PWY-6167	flavin biosynthesis II (archaea)
CJE0692	PWY-6168	flavin biosynthesis III (fungi)
CJE0700	PWY-1042	glycolysis IV (plant cytosol)
CJE0700	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CJE0700	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJE0700	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJE0700	PWY-7385	1,3-propanediol biosynthesis (engineered)
CJE0735	PWY-5101	L-isoleucine biosynthesis II
CJE0735	PWY-5103	L-isoleucine biosynthesis III
CJE0735	PWY-5104	L-isoleucine biosynthesis IV
CJE0735	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CJE0742	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE0744	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CJE0744	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CJE0744	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CJE0750	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJE0750	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJE0767	PWY-4983	L-citrulline-nitric oxide cycle
CJE0767	PWY-4984	urea cycle
CJE0767	PWY-5	canavanine biosynthesis
CJE0767	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJE0767	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJE0785	PWY-7560	methylerythritol phosphate pathway II
CJE0787	PWY-1281	sulfoacetaldehyde degradation I
CJE0787	PWY-5482	pyruvate fermentation to acetate II
CJE0787	PWY-5485	pyruvate fermentation to acetate IV
CJE0787	PWY-5497	purine nucleobases degradation II (anaerobic)
CJE0787	PWY-6637	sulfolactate degradation II
CJE0788	PWY-5482	pyruvate fermentation to acetate II
CJE0788	PWY-5485	pyruvate fermentation to acetate IV
CJE0788	PWY-5497	purine nucleobases degradation II (anaerobic)
CJE0798	PWY-381	nitrate reduction II (assimilatory)
CJE0798	PWY-5675	nitrate reduction V (assimilatory)
CJE0798	PWY-6549	L-glutamine biosynthesis III
CJE0798	PWY-6963	ammonia assimilation cycle I
CJE0798	PWY-6964	ammonia assimilation cycle II
CJE0802	PWY-6123	inosine-5'-phosphate biosynthesis I
CJE0802	PWY-7234	inosine-5'-phosphate biosynthesis III
CJE0805	PWY-5663	tetrahydrobiopterin biosynthesis I
CJE0805	PWY-5664	tetrahydrobiopterin biosynthesis II
CJE0805	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CJE0805	PWY-6703	preQ<sub>0</sub> biosynthesis
CJE0805	PWY-6983	tetrahydrobiopterin biosynthesis III
CJE0805	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CJE0813	PWY-6829	tRNA methylation (yeast)
CJE0813	PWY-7285	methylwyosine biosynthesis
CJE0813	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CJE0815	PWY-5691	urate degradation to allantoin I
CJE0815	PWY-7394	urate degradation to allantoin II
CJE0816	PWY-6164	3-dehydroquinate biosynthesis I
CJE0819	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CJE0854	PWY-6936	seleno-amino acid biosynthesis
CJE0854	PWY-7274	D-cycloserine biosynthesis
CJE0855	PWY-40	putrescine biosynthesis I
CJE0855	PWY-43	putrescine biosynthesis II
CJE0855	PWY-6305	putrescine biosynthesis IV
CJE0855	PWY-6834	spermidine biosynthesis III
CJE0857	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJE0857	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJE0857	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE0857	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CJE0857	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CJE0857	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CJE0881	PWY-2201	folate transformations I
CJE0881	PWY-5497	purine nucleobases degradation II (anaerobic)
CJE0886	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE0886	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE0889	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE0889	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE0895	PWY-5686	UMP biosynthesis
CJE0897	PWY-2941	L-lysine biosynthesis II
CJE0897	PWY-2942	L-lysine biosynthesis III
CJE0897	PWY-5097	L-lysine biosynthesis VI
CJE0904	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJE0904	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJE0908	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CJE0922	PWY-5747	2-methylcitrate cycle II
CJE0927	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJE0932	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJE0934	PWY-5669	phosphatidylethanolamine biosynthesis I
CJE0940	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJE0942	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CJE0942	PWY-2201	folate transformations I
CJE0942	PWY-3841	folate transformations II
CJE0942	PWY-5030	L-histidine degradation III
CJE0942	PWY-5497	purine nucleobases degradation II (anaerobic)
CJE0942	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CJE0944	PWY-6823	molybdenum cofactor biosynthesis
CJE0945	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE0945	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE0948	PWY-5958	acridone alkaloid biosynthesis
CJE0948	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CJE0948	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CJE0973	PWY-7560	methylerythritol phosphate pathway II
CJE0974	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJE0984	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CJE0990	PWY-6936	seleno-amino acid biosynthesis
CJE1005	PWY-6605	adenine and adenosine salvage II
CJE1005	PWY-6610	adenine and adenosine salvage IV
CJE1007	PWY-5988	wound-induced proteolysis I
CJE1007	PWY-6018	seed germination protein turnover
CJE1009	PWY-4983	L-citrulline-nitric oxide cycle
CJE1009	PWY-4984	urea cycle
CJE1009	PWY-5	canavanine biosynthesis
CJE1009	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJE1009	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJE1010	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJE1010	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CJE1027	PWY-43	putrescine biosynthesis II
CJE1033	PWY-6123	inosine-5'-phosphate biosynthesis I
CJE1033	PWY-6124	inosine-5'-phosphate biosynthesis II
CJE1033	PWY-7234	inosine-5'-phosphate biosynthesis III
CJE1035	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJE1035	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJE1035	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJE1074	PWY-4981	L-proline biosynthesis II (from arginine)
CJE1074	PWY-4984	urea cycle
CJE1074	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJE1075	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJE1075	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CJE1076	PWY-6168	flavin biosynthesis III (fungi)
CJE1076	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CJE1088	PWY-6164	3-dehydroquinate biosynthesis I
CJE1090	PWY-6700	queuosine biosynthesis
CJE1167	PWY-2941	L-lysine biosynthesis II
CJE1167	PWY-2942	L-lysine biosynthesis III
CJE1167	PWY-5097	L-lysine biosynthesis VI
CJE1167	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJE1167	PWY-6559	spermidine biosynthesis II
CJE1167	PWY-6562	norspermidine biosynthesis
CJE1167	PWY-7153	grixazone biosynthesis
CJE1167	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJE1183	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CJE1183	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CJE1183	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CJE1183	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CJE1187	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CJE1187	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CJE1187	PWY-6897	thiamin salvage II
CJE1187	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CJE1187	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CJE1187	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
CJE1187	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CJE1188	PWY-6892	thiazole biosynthesis I (E. coli)
CJE1188	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CJE1189	PWY-6891	thiazole biosynthesis II (Bacillus)
CJE1189	PWY-6892	thiazole biosynthesis I (E. coli)
CJE1198	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE1198	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE1201	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CJE1201	PWY-6596	adenosine nucleotides degradation I
CJE1201	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CJE1202	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CJE1210	PWY-5269	cardiolipin biosynthesis II
CJE1210	PWY-5668	cardiolipin biosynthesis I
CJE1219	PWY-3341	L-proline biosynthesis III
CJE1219	PWY-4981	L-proline biosynthesis II (from arginine)
CJE1219	PWY-6344	L-ornithine degradation II (Stickland reaction)
CJE1223	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJE1223	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CJE1224	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CJE1224	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CJE1224	PWY-6897	thiamin salvage II
CJE1224	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CJE1224	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CJE1224	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
CJE1224	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CJE1225	PWY-6910	hydroxymethylpyrimidine salvage
CJE1225	PWY-7356	thiamin salvage IV (yeast)
CJE1225	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CJE1231	PWY-2161	folate polyglutamylation
CJE1239	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CJE1239	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CJE1241	PWY-5686	UMP biosynthesis
CJE1247	PWY-7560	methylerythritol phosphate pathway II
CJE1257	PWY-5669	phosphatidylethanolamine biosynthesis I
CJE1258	PWY-5669	phosphatidylethanolamine biosynthesis I
CJE1273	PWY-3821	galactose degradation III
CJE1273	PWY-6317	galactose degradation I (Leloir pathway)
CJE1273	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CJE1273	PWY-6527	stachyose degradation
CJE1273	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CJE1273	PWY-7344	UDP-D-galactose biosynthesis
CJE1285	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CJE1292	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE1301	PWY-5481	pyruvate fermentation to lactate
CJE1301	PWY-6901	superpathway of glucose and xylose degradation
CJE1311	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CJE1320	PWY-3781	aerobic respiration I (cytochrome c)
CJE1320	PWY-6692	Fe(II) oxidation
CJE1320	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
CJE1320	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJE1330	PWY-5667	CDP-diacylglycerol biosynthesis I
CJE1330	PWY-5981	CDP-diacylglycerol biosynthesis III
CJE1332	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CJE1332	PWY-6153	autoinducer AI-2 biosynthesis I
CJE1332	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CJE1335	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CJE1335	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CJE1335	PWY-6936	seleno-amino acid biosynthesis
CJE1335	PWY-702	L-methionine biosynthesis II
CJE1336	PWY-2201	folate transformations I
CJE1336	PWY-3841	folate transformations II
CJE1347	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE1347	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE1353	PWY-6167	flavin biosynthesis II (archaea)
CJE1353	PWY-6168	flavin biosynthesis III (fungi)
CJE1353	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE1379	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CJE1379	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CJE1385	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CJE1387	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJE1387	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJE1387	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJE1406	PWY-723	alkylnitronates degradation
CJE1478	PWY-7183	pyrimidine nucleobases salvage I
CJE1480	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJE1484	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJE1485	PWY-6143	CMP-pseudaminate biosynthesis
CJE1485	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
CJE1485	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
CJE1485	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
CJE1492	PWY-4381	fatty acid biosynthesis initiation I
CJE1506	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJE1506	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJE1506	PWY-6143	CMP-pseudaminate biosynthesis
CJE1512	PWY-6143	CMP-pseudaminate biosynthesis
CJE1516	PWY-6749	CMP-legionaminate biosynthesis I
CJE1516	PWY-7131	CMP-legionaminate biosynthesis II
CJE1520	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJE1520	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJE1535	PWY-7560	methylerythritol phosphate pathway II
CJE1539	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CJE1540	PWY-6803	phosphatidylcholine acyl editing
CJE1540	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CJE1540	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CJE1540	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CJE1546	PWY-5674	nitrate reduction IV (dissimilatory)
CJE1556	PWY-5392	reductive TCA cycle II
CJE1556	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJE1556	PWY-5690	TCA cycle II (plants and fungi)
CJE1556	PWY-5913	TCA cycle VI (obligate autotrophs)
CJE1556	PWY-6728	methylaspartate cycle
CJE1556	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJE1556	PWY-7254	TCA cycle VII (acetate-producers)
CJE1556	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CJE1558	PWY-6749	CMP-legionaminate biosynthesis I
CJE1560	PWY-5198	factor 420 biosynthesis
CJE1560	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CJE1560	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CJE1566	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CJE1576	PWY-5506	methanol oxidation to formaldehyde IV
CJE1582	PWY-6123	inosine-5'-phosphate biosynthesis I
CJE1582	PWY-6124	inosine-5'-phosphate biosynthesis II
CJE1582	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE1582	PWY-7234	inosine-5'-phosphate biosynthesis III
CJE1587	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CJE1587	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CJE1587	PWY-5989	stearate biosynthesis II (bacteria and plants)
CJE1587	PWY-6113	superpathway of mycolate biosynthesis
CJE1587	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CJE1587	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CJE1587	PWY-7096	triclosan resistance
CJE1587	PWYG-321	mycolate biosynthesis
CJE1588	PWY-1042	glycolysis IV (plant cytosol)
CJE1588	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJE1588	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJE1588	PWY-7003	glycerol degradation to butanol
CJE1589	PWY-1042	glycolysis IV (plant cytosol)
CJE1589	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJE1589	PWY-6886	1-butanol autotrophic biosynthesis
CJE1589	PWY-6901	superpathway of glucose and xylose degradation
CJE1589	PWY-7003	glycerol degradation to butanol
CJE1590	PWY-1042	glycolysis IV (plant cytosol)
CJE1590	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJE1590	PWY-6901	superpathway of glucose and xylose degradation
CJE1590	PWY-7003	glycerol degradation to butanol
CJE1591	PWY-5381	pyridine nucleotide cycling (plants)
CJE1591	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CJE1594	PWY-6749	CMP-legionaminate biosynthesis I
CJE1596	PWY-6012	acyl carrier protein metabolism I
CJE1596	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CJE1606	PWY-5723	Rubisco shunt
CJE1609	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CJE1610	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CJE1612	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
CJE1632	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CJE1632	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CJE1632	PWY-6896	thiamin salvage I
CJE1632	PWY-6897	thiamin salvage II
CJE1662	PWY-3781	aerobic respiration I (cytochrome c)
CJE1662	PWY-4521	arsenite oxidation I (respiratory)
CJE1662	PWY-6692	Fe(II) oxidation
CJE1662	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJE1663	PWY-3781	aerobic respiration I (cytochrome c)
CJE1663	PWY-4521	arsenite oxidation I (respiratory)
CJE1663	PWY-6692	Fe(II) oxidation
CJE1663	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJE1667	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJE1667	PWY-5686	UMP biosynthesis
CJE1667	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJE1671	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJE1676	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CJE1676	PWY-6853	ethylene biosynthesis II (microbes)
CJE1676	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CJE1677	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CJE1688	PWY-6562	norspermidine biosynthesis
CJE1691	PWY-6823	molybdenum cofactor biosynthesis
CJE1693	PWY-6823	molybdenum cofactor biosynthesis
CJE1700	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJE1700	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJE1700	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJE1702	PWY-2941	L-lysine biosynthesis II
CJE1702	PWY-5097	L-lysine biosynthesis VI
CJE1706	PWY-3801	sucrose degradation II (sucrose synthase)
CJE1706	PWY-5054	sorbitol biosynthesis I
CJE1706	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CJE1706	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CJE1706	PWY-5659	GDP-mannose biosynthesis
CJE1706	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJE1706	PWY-621	sucrose degradation III (sucrose invertase)
CJE1706	PWY-622	starch biosynthesis
CJE1706	PWY-6531	mannitol cycle
CJE1706	PWY-6981	chitin biosynthesis
CJE1706	PWY-7238	sucrose biosynthesis II
CJE1706	PWY-7347	sucrose biosynthesis III
CJE1706	PWY-7385	1,3-propanediol biosynthesis (engineered)
CJE1707	PWY-3801	sucrose degradation II (sucrose synthase)
CJE1707	PWY-6527	stachyose degradation
CJE1707	PWY-6981	chitin biosynthesis
CJE1707	PWY-7238	sucrose biosynthesis II
CJE1707	PWY-7343	UDP-glucose biosynthesis
CJE1708	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CJE1708	PWY-7118	chitin degradation to ethanol
CJE1756	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE1756	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE1779	PWY-7560	methylerythritol phosphate pathway II
CJE1781	PWY-5278	sulfite oxidation III
CJE1781	PWY-5340	sulfate activation for sulfonation
CJE1781	PWY-6683	sulfate reduction III (assimilatory)
CJE1781	PWY-6932	selenate reduction
CJE1782	PWY-5269	cardiolipin biosynthesis II
CJE1782	PWY-5668	cardiolipin biosynthesis I
CJE1785	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CJE1785	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CJE1806	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJE1817	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CJE1817	PWY-5723	Rubisco shunt
CJE1817	PWY-6891	thiazole biosynthesis II (Bacillus)
CJE1817	PWY-6892	thiazole biosynthesis I (E. coli)
CJE1817	PWY-6901	superpathway of glucose and xylose degradation
CJE1817	PWY-7560	methylerythritol phosphate pathway II
CJE1824	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE1824	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE1844	PWY-1042	glycolysis IV (plant cytosol)
CJE1844	PWY-1622	formaldehyde assimilation I (serine pathway)
CJE1844	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CJE1844	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJE1844	PWY-5723	Rubisco shunt
CJE1844	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJE1844	PWY-6886	1-butanol autotrophic biosynthesis
CJE1844	PWY-6901	superpathway of glucose and xylose degradation
CJE1844	PWY-7003	glycerol degradation to butanol
CJE1844	PWY-7124	ethylene biosynthesis V (engineered)
CJE1844	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CJE1848	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJE1848	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJE1853	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CJE1888	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CJE1889	PWY-6871	3-methylbutanol biosynthesis
CJE1892	PWY-6700	queuosine biosynthesis
CJE1895	PWY-5344	L-homocysteine biosynthesis
CJE1895	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
