CJS3_0012	PWY-5101	L-isoleucine biosynthesis II
CJS3_0012	PWY-5103	L-isoleucine biosynthesis III
CJS3_0012	PWY-5104	L-isoleucine biosynthesis IV
CJS3_0012	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CJS3_0016	PWY-6703	preQ<sub>0</sub> biosynthesis
CJS3_0023	PWY-6123	inosine-5'-phosphate biosynthesis I
CJS3_0023	PWY-6124	inosine-5'-phosphate biosynthesis II
CJS3_0023	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_0023	PWY-7234	inosine-5'-phosphate biosynthesis III
CJS3_0024	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJS3_0024	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJS3_0024	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CJS3_0024	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CJS3_0024	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_0024	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_0024	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJS3_0024	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CJS3_0026	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJS3_0027	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CJS3_0027	PWY-7177	UTP and CTP dephosphorylation II
CJS3_0027	PWY-7185	UTP and CTP dephosphorylation I
CJS3_0065	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CJS3_0065	PWY-6148	tetrahydromethanopterin biosynthesis
CJS3_0065	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CJS3_0065	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CJS3_0066	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJS3_0066	PWY-6416	quinate degradation II
CJS3_0066	PWY-6707	gallate biosynthesis
CJS3_0084	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_0084	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_0086	PWY-5392	reductive TCA cycle II
CJS3_0086	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJS3_0086	PWY-5690	TCA cycle II (plants and fungi)
CJS3_0086	PWY-5913	TCA cycle VI (obligate autotrophs)
CJS3_0086	PWY-6728	methylaspartate cycle
CJS3_0086	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_0086	PWY-7254	TCA cycle VII (acetate-producers)
CJS3_0086	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CJS3_0098	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CJS3_0098	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CJS3_0104	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_0106	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_0115	PWY-4381	fatty acid biosynthesis initiation I
CJS3_0115	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CJS3_0115	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJS3_0116	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CJS3_0116	PWY-6153	autoinducer AI-2 biosynthesis I
CJS3_0116	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CJS3_0126	PWY-4381	fatty acid biosynthesis initiation I
CJS3_0126	PWY-5743	3-hydroxypropanoate cycle
CJS3_0126	PWY-5744	glyoxylate assimilation
CJS3_0126	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CJS3_0126	PWY-6679	jadomycin biosynthesis
CJS3_0126	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJS3_0129	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CJS3_0133	PWY-702	L-methionine biosynthesis II
CJS3_0159	PWY-6703	preQ<sub>0</sub> biosynthesis
CJS3_0160	PWY-6823	molybdenum cofactor biosynthesis
CJS3_0164	PWY-2781	<i>cis</i>-zeatin biosynthesis
CJS3_0167	PWY-6854	ethylene biosynthesis III (microbes)
CJS3_0183	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJS3_0183	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CJS3_0184	PWY-6938	NADH repair
CJS3_0190	PWY-5663	tetrahydrobiopterin biosynthesis I
CJS3_0190	PWY-5664	tetrahydrobiopterin biosynthesis II
CJS3_0190	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CJS3_0190	PWY-6703	preQ<sub>0</sub> biosynthesis
CJS3_0190	PWY-6983	tetrahydrobiopterin biosynthesis III
CJS3_0190	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CJS3_0191	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_0192	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJS3_0192	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJS3_0192	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJS3_0192	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CJS3_0193	PWY-2941	L-lysine biosynthesis II
CJS3_0193	PWY-2942	L-lysine biosynthesis III
CJS3_0193	PWY-5097	L-lysine biosynthesis VI
CJS3_0213	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJS3_0213	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJS3_0215	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJS3_0215	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJS3_0219	PWY-5381	pyridine nucleotide cycling (plants)
CJS3_0220	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJS3_0220	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJS3_0220	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CJS3_0220	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CJS3_0220	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_0220	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_0220	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJS3_0220	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CJS3_0222	PWY-5686	UMP biosynthesis
CJS3_0226	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CJS3_0226	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJS3_0226	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CJS3_0226	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CJS3_0229	PWY-6823	molybdenum cofactor biosynthesis
CJS3_0229	PWY-6891	thiazole biosynthesis II (Bacillus)
CJS3_0229	PWY-6892	thiazole biosynthesis I (E. coli)
CJS3_0229	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CJS3_0247	PWY-7039	phosphatidate metabolism, as a signaling molecule
CJS3_0249	PWY-5686	UMP biosynthesis
CJS3_0259	PWY-5057	L-valine degradation II
CJS3_0259	PWY-5076	L-leucine degradation III
CJS3_0259	PWY-5078	L-isoleucine degradation II
CJS3_0259	PWY-5101	L-isoleucine biosynthesis II
CJS3_0259	PWY-5103	L-isoleucine biosynthesis III
CJS3_0259	PWY-5104	L-isoleucine biosynthesis IV
CJS3_0259	PWY-5108	L-isoleucine biosynthesis V
CJS3_0263	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CJS3_0263	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CJS3_0263	PWY-5989	stearate biosynthesis II (bacteria and plants)
CJS3_0263	PWY-5994	palmitate biosynthesis I (animals and fungi)
CJS3_0263	PWY-6113	superpathway of mycolate biosynthesis
CJS3_0263	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CJS3_0263	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CJS3_0263	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJS3_0263	PWYG-321	mycolate biosynthesis
CJS3_0268	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJS3_0268	PWY-5686	UMP biosynthesis
CJS3_0268	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJS3_0270	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CJS3_0270	PWY-5723	Rubisco shunt
CJS3_0280	PWY-5381	pyridine nucleotide cycling (plants)
CJS3_0280	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CJS3_0280	PWY-6596	adenosine nucleotides degradation I
CJS3_0280	PWY-6606	guanosine nucleotides degradation II
CJS3_0280	PWY-6607	guanosine nucleotides degradation I
CJS3_0280	PWY-6608	guanosine nucleotides degradation III
CJS3_0280	PWY-7185	UTP and CTP dephosphorylation I
CJS3_0282	PWY-5155	&beta;-alanine biosynthesis III
CJS3_0284	PWY-6654	phosphopantothenate biosynthesis III
CJS3_0290	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CJS3_0294	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CJS3_0300	PWY-2941	L-lysine biosynthesis II
CJS3_0300	PWY-2942	L-lysine biosynthesis III
CJS3_0300	PWY-5097	L-lysine biosynthesis VI
CJS3_0302	PWY-3461	L-tyrosine biosynthesis II
CJS3_0302	PWY-3462	L-phenylalanine biosynthesis II
CJS3_0302	PWY-6120	L-tyrosine biosynthesis III
CJS3_0302	PWY-6627	salinosporamide A biosynthesis
CJS3_0302	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CJS3_0307	PWY-6891	thiazole biosynthesis II (Bacillus)
CJS3_0307	PWY-6892	thiazole biosynthesis I (E. coli)
CJS3_0307	PWY-7560	methylerythritol phosphate pathway II
CJS3_0310	PWY-5839	menaquinol-7 biosynthesis
CJS3_0310	PWY-5844	menaquinol-9 biosynthesis
CJS3_0310	PWY-5849	menaquinol-6 biosynthesis
CJS3_0310	PWY-5890	menaquinol-10 biosynthesis
CJS3_0310	PWY-5891	menaquinol-11 biosynthesis
CJS3_0310	PWY-5892	menaquinol-12 biosynthesis
CJS3_0310	PWY-5895	menaquinol-13 biosynthesis
CJS3_0314	PWY-4381	fatty acid biosynthesis initiation I
CJS3_0318	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJS3_0318	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CJS3_0318	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJS3_0318	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_0318	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CJS3_0318	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CJS3_0318	PWY-7205	CMP phosphorylation
CJS3_0318	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CJS3_0318	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_0318	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_0318	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_0318	PWY-7224	purine deoxyribonucleosides salvage
CJS3_0318	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJS3_0318	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CJS3_0336	PWY-5958	acridone alkaloid biosynthesis
CJS3_0336	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CJS3_0336	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CJS3_0337	PWY-5958	acridone alkaloid biosynthesis
CJS3_0337	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CJS3_0337	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CJS3_0347	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CJS3_0347	PWY-6148	tetrahydromethanopterin biosynthesis
CJS3_0347	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CJS3_0347	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CJS3_0350	PWY-6749	CMP-legionaminate biosynthesis I
CJS3_0371	PWY-5686	UMP biosynthesis
CJS3_0373	PWY-6167	flavin biosynthesis II (archaea)
CJS3_0373	PWY-6168	flavin biosynthesis III (fungi)
CJS3_0374	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJS3_0374	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJS3_0377	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJS3_0379	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CJS3_0382	PWY-1042	glycolysis IV (plant cytosol)
CJS3_0382	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CJS3_0382	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJS3_0382	PWY-5723	Rubisco shunt
CJS3_0382	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJS3_0382	PWY-6886	1-butanol autotrophic biosynthesis
CJS3_0382	PWY-6901	superpathway of glucose and xylose degradation
CJS3_0382	PWY-7003	glycerol degradation to butanol
CJS3_0382	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CJS3_0382	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CJS3_0383	PWY-7254	TCA cycle VII (acetate-producers)
CJS3_0384	PWY-3961	phosphopantothenate biosynthesis II
CJS3_0392	PWY-1622	formaldehyde assimilation I (serine pathway)
CJS3_0392	PWY-181	photorespiration
CJS3_0392	PWY-2161	folate polyglutamylation
CJS3_0392	PWY-2201	folate transformations I
CJS3_0392	PWY-3661	glycine betaine degradation I
CJS3_0392	PWY-3661-1	glycine betaine degradation II (mammalian)
CJS3_0392	PWY-3841	folate transformations II
CJS3_0392	PWY-5497	purine nucleobases degradation II (anaerobic)
CJS3_0395	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJS3_0399	PWY-3781	aerobic respiration I (cytochrome c)
CJS3_0399	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CJS3_0399	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJS3_0399	PWY-5690	TCA cycle II (plants and fungi)
CJS3_0399	PWY-6728	methylaspartate cycle
CJS3_0399	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_0399	PWY-7254	TCA cycle VII (acetate-producers)
CJS3_0399	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJS3_0400	PWY-3781	aerobic respiration I (cytochrome c)
CJS3_0400	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CJS3_0400	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJS3_0400	PWY-5690	TCA cycle II (plants and fungi)
CJS3_0400	PWY-6728	methylaspartate cycle
CJS3_0400	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_0400	PWY-7254	TCA cycle VII (acetate-producers)
CJS3_0400	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJS3_0404	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
CJS3_0421	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_0421	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_0422	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CJS3_0422	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CJS3_0422	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CJS3_0423	PWY-1042	glycolysis IV (plant cytosol)
CJS3_0423	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CJS3_0423	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJS3_0423	PWY-5723	Rubisco shunt
CJS3_0423	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJS3_0423	PWY-6886	1-butanol autotrophic biosynthesis
CJS3_0423	PWY-6901	superpathway of glucose and xylose degradation
CJS3_0423	PWY-7003	glycerol degradation to butanol
CJS3_0423	PWY-7124	ethylene biosynthesis V (engineered)
CJS3_0423	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CJS3_0424	PWY-5367	petroselinate biosynthesis
CJS3_0424	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CJS3_0424	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CJS3_0424	PWY-5989	stearate biosynthesis II (bacteria and plants)
CJS3_0424	PWY-5994	palmitate biosynthesis I (animals and fungi)
CJS3_0424	PWY-6113	superpathway of mycolate biosynthesis
CJS3_0424	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CJS3_0424	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CJS3_0424	PWY-6951	CJS3_0424|fabG|YP_005659022.1|GeneID:12246830
CJS3_0424	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CJS3_0424	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJS3_0424	PWYG-321	mycolate biosynthesis
CJS3_0425	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CJS3_0425	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CJS3_0426	PWY-3781	aerobic respiration I (cytochrome c)
CJS3_0426	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CJS3_0426	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJS3_0426	PWY-5690	TCA cycle II (plants and fungi)
CJS3_0426	PWY-6728	methylaspartate cycle
CJS3_0426	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_0426	PWY-7254	TCA cycle VII (acetate-producers)
CJS3_0426	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJS3_0427	PWY-3781	aerobic respiration I (cytochrome c)
CJS3_0427	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CJS3_0427	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJS3_0427	PWY-5690	TCA cycle II (plants and fungi)
CJS3_0427	PWY-6728	methylaspartate cycle
CJS3_0427	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_0427	PWY-7254	TCA cycle VII (acetate-producers)
CJS3_0427	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJS3_0429	PWY-6899	base-degraded thiamin salvage
CJS3_0429	PWY-7356	thiamin salvage IV (yeast)
CJS3_0433	PWY-4381	fatty acid biosynthesis initiation I
CJS3_0433	PWY-5743	3-hydroxypropanoate cycle
CJS3_0433	PWY-5744	glyoxylate assimilation
CJS3_0433	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CJS3_0433	PWY-6679	jadomycin biosynthesis
CJS3_0433	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CJS3_0443	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CJS3_0443	PWY-5723	Rubisco shunt
CJS3_0445	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CJS3_0454	PWY-5198	factor 420 biosynthesis
CJS3_0473	PWY-2941	L-lysine biosynthesis II
CJS3_0473	PWY-2942	L-lysine biosynthesis III
CJS3_0473	PWY-5097	L-lysine biosynthesis VI
CJS3_0505	PWY-6123	inosine-5'-phosphate biosynthesis I
CJS3_0505	PWY-6124	inosine-5'-phosphate biosynthesis II
CJS3_0505	PWY-7234	inosine-5'-phosphate biosynthesis III
CJS3_0506	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJS3_0506	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJS3_0506	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJS3_0507	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJS3_0507	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJS3_0507	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJS3_0509	PWY-5667	CDP-diacylglycerol biosynthesis I
CJS3_0509	PWY-5981	CDP-diacylglycerol biosynthesis III
CJS3_0509	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CJS3_0509	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CJS3_0521	PWY-5913	TCA cycle VI (obligate autotrophs)
CJS3_0521	PWY-6549	L-glutamine biosynthesis III
CJS3_0521	PWY-6728	methylaspartate cycle
CJS3_0521	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_0521	PWY-7124	ethylene biosynthesis V (engineered)
CJS3_0521	PWY-7254	TCA cycle VII (acetate-producers)
CJS3_0521	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CJS3_0523	PWY-5392	reductive TCA cycle II
CJS3_0523	PWY-5537	pyruvate fermentation to acetate V
CJS3_0523	PWY-5538	pyruvate fermentation to acetate VI
CJS3_0523	PWY-5690	TCA cycle II (plants and fungi)
CJS3_0523	PWY-5913	TCA cycle VI (obligate autotrophs)
CJS3_0523	PWY-6728	methylaspartate cycle
CJS3_0523	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_0523	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CJS3_0524	PWY-5392	reductive TCA cycle II
CJS3_0524	PWY-5537	pyruvate fermentation to acetate V
CJS3_0524	PWY-5538	pyruvate fermentation to acetate VI
CJS3_0524	PWY-5690	TCA cycle II (plants and fungi)
CJS3_0524	PWY-5913	TCA cycle VI (obligate autotrophs)
CJS3_0524	PWY-6728	methylaspartate cycle
CJS3_0524	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_0524	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CJS3_0532	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJS3_0535	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJS3_0535	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CJS3_0562	PWY-6167	flavin biosynthesis II (archaea)
CJS3_0562	PWY-6168	flavin biosynthesis III (fungi)
CJS3_0562	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CJS3_0564	PWY-5101	L-isoleucine biosynthesis II
CJS3_0564	PWY-5103	L-isoleucine biosynthesis III
CJS3_0564	PWY-5104	L-isoleucine biosynthesis IV
CJS3_0564	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CJS3_0564	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CJS3_0564	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CJS3_0564	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CJS3_0565	PWY-5101	L-isoleucine biosynthesis II
CJS3_0565	PWY-5103	L-isoleucine biosynthesis III
CJS3_0565	PWY-5104	L-isoleucine biosynthesis IV
CJS3_0565	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CJS3_0565	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CJS3_0565	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CJS3_0565	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CJS3_0567	PWY-6700	queuosine biosynthesis
CJS3_0572	PWY-2941	L-lysine biosynthesis II
CJS3_0572	PWY-2942	L-lysine biosynthesis III
CJS3_0572	PWY-5097	L-lysine biosynthesis VI
CJS3_0572	PWY-6559	spermidine biosynthesis II
CJS3_0572	PWY-6562	norspermidine biosynthesis
CJS3_0572	PWY-7153	grixazone biosynthesis
CJS3_0575	PWY-6614	tetrahydrofolate biosynthesis
CJS3_0579	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CJS3_0579	PWY-6167	flavin biosynthesis II (archaea)
CJS3_0579	PWY-6168	flavin biosynthesis III (fungi)
CJS3_0587	PWY-1042	glycolysis IV (plant cytosol)
CJS3_0587	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CJS3_0587	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJS3_0587	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJS3_0587	PWY-7385	1,3-propanediol biosynthesis (engineered)
CJS3_0622	PWY-5101	L-isoleucine biosynthesis II
CJS3_0622	PWY-5103	L-isoleucine biosynthesis III
CJS3_0622	PWY-5104	L-isoleucine biosynthesis IV
CJS3_0622	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CJS3_0629	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_0631	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CJS3_0631	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CJS3_0631	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CJS3_0637	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJS3_0637	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJS3_0656	PWY-4983	L-citrulline-nitric oxide cycle
CJS3_0656	PWY-4984	urea cycle
CJS3_0656	PWY-5	canavanine biosynthesis
CJS3_0656	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJS3_0656	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJS3_0707	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CJS3_0737	PWY-7560	methylerythritol phosphate pathway II
CJS3_0739	PWY-1281	sulfoacetaldehyde degradation I
CJS3_0739	PWY-5482	pyruvate fermentation to acetate II
CJS3_0739	PWY-5485	pyruvate fermentation to acetate IV
CJS3_0739	PWY-5497	purine nucleobases degradation II (anaerobic)
CJS3_0739	PWY-6637	sulfolactate degradation II
CJS3_0740	PWY-5482	pyruvate fermentation to acetate II
CJS3_0740	PWY-5485	pyruvate fermentation to acetate IV
CJS3_0740	PWY-5497	purine nucleobases degradation II (anaerobic)
CJS3_0750	PWY-381	nitrate reduction II (assimilatory)
CJS3_0750	PWY-5675	nitrate reduction V (assimilatory)
CJS3_0750	PWY-6549	L-glutamine biosynthesis III
CJS3_0750	PWY-6963	ammonia assimilation cycle I
CJS3_0750	PWY-6964	ammonia assimilation cycle II
CJS3_0753	PWY-6123	inosine-5'-phosphate biosynthesis I
CJS3_0753	PWY-7234	inosine-5'-phosphate biosynthesis III
CJS3_0756	PWY-5663	tetrahydrobiopterin biosynthesis I
CJS3_0756	PWY-5664	tetrahydrobiopterin biosynthesis II
CJS3_0756	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CJS3_0756	PWY-6703	preQ<sub>0</sub> biosynthesis
CJS3_0756	PWY-6983	tetrahydrobiopterin biosynthesis III
CJS3_0756	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CJS3_0764	PWY-6829	tRNA methylation (yeast)
CJS3_0764	PWY-7285	methylwyosine biosynthesis
CJS3_0764	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CJS3_0766	PWY-5691	urate degradation to allantoin I
CJS3_0766	PWY-7394	urate degradation to allantoin II
CJS3_0767	PWY-6164	3-dehydroquinate biosynthesis I
CJS3_0770	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CJS3_0811	PWY-6936	seleno-amino acid biosynthesis
CJS3_0811	PWY-7274	D-cycloserine biosynthesis
CJS3_0812	PWY-40	putrescine biosynthesis I
CJS3_0812	PWY-43	putrescine biosynthesis II
CJS3_0812	PWY-6305	putrescine biosynthesis IV
CJS3_0812	PWY-6834	spermidine biosynthesis III
CJS3_0814	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CJS3_0814	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CJS3_0814	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_0814	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CJS3_0814	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CJS3_0814	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CJS3_0838	PWY-2201	folate transformations I
CJS3_0838	PWY-5497	purine nucleobases degradation II (anaerobic)
CJS3_0843	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_0843	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_0846	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_0846	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_0852	PWY-5686	UMP biosynthesis
CJS3_0854	PWY-2941	L-lysine biosynthesis II
CJS3_0854	PWY-2942	L-lysine biosynthesis III
CJS3_0854	PWY-5097	L-lysine biosynthesis VI
CJS3_0861	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJS3_0861	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJS3_0865	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CJS3_0879	PWY-5747	2-methylcitrate cycle II
CJS3_0884	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJS3_0889	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJS3_0891	PWY-5669	phosphatidylethanolamine biosynthesis I
CJS3_0897	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJS3_0899	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CJS3_0899	PWY-2201	folate transformations I
CJS3_0899	PWY-3841	folate transformations II
CJS3_0899	PWY-5030	L-histidine degradation III
CJS3_0899	PWY-5497	purine nucleobases degradation II (anaerobic)
CJS3_0899	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CJS3_0901	PWY-6823	molybdenum cofactor biosynthesis
CJS3_0902	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_0902	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_0905	PWY-5958	acridone alkaloid biosynthesis
CJS3_0905	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CJS3_0905	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CJS3_0935	PWY-7560	methylerythritol phosphate pathway II
CJS3_0936	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJS3_0946	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CJS3_0953	PWY-6936	seleno-amino acid biosynthesis
CJS3_0969	PWY-6605	adenine and adenosine salvage II
CJS3_0969	PWY-6610	adenine and adenosine salvage IV
CJS3_0971	PWY-5988	wound-induced proteolysis I
CJS3_0971	PWY-6018	seed germination protein turnover
CJS3_0973	PWY-4983	L-citrulline-nitric oxide cycle
CJS3_0973	PWY-4984	urea cycle
CJS3_0973	PWY-5	canavanine biosynthesis
CJS3_0973	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJS3_0973	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJS3_0974	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJS3_0974	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CJS3_0991	PWY-43	putrescine biosynthesis II
CJS3_0997	PWY-6123	inosine-5'-phosphate biosynthesis I
CJS3_0997	PWY-6124	inosine-5'-phosphate biosynthesis II
CJS3_0997	PWY-7234	inosine-5'-phosphate biosynthesis III
CJS3_0999	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJS3_0999	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJS3_0999	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJS3_1043	PWY-4981	L-proline biosynthesis II (from arginine)
CJS3_1043	PWY-4984	urea cycle
CJS3_1043	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJS3_1044	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJS3_1044	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CJS3_1045	PWY-6168	flavin biosynthesis III (fungi)
CJS3_1045	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CJS3_1057	PWY-6164	3-dehydroquinate biosynthesis I
CJS3_1059	PWY-6700	queuosine biosynthesis
CJS3_1072	PWY-2941	L-lysine biosynthesis II
CJS3_1072	PWY-2942	L-lysine biosynthesis III
CJS3_1072	PWY-5097	L-lysine biosynthesis VI
CJS3_1072	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJS3_1072	PWY-6559	spermidine biosynthesis II
CJS3_1072	PWY-6562	norspermidine biosynthesis
CJS3_1072	PWY-7153	grixazone biosynthesis
CJS3_1072	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJS3_1088	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CJS3_1088	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CJS3_1088	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CJS3_1088	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CJS3_1092	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CJS3_1092	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CJS3_1092	PWY-6897	thiamin salvage II
CJS3_1092	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CJS3_1092	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CJS3_1092	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
CJS3_1092	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CJS3_1093	PWY-6892	thiazole biosynthesis I (E. coli)
CJS3_1093	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CJS3_1094	PWY-6891	thiazole biosynthesis II (Bacillus)
CJS3_1094	PWY-6892	thiazole biosynthesis I (E. coli)
CJS3_1103	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_1103	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_1106	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CJS3_1106	PWY-6596	adenosine nucleotides degradation I
CJS3_1106	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_1107	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CJS3_1114	PWY-5269	cardiolipin biosynthesis II
CJS3_1114	PWY-5668	cardiolipin biosynthesis I
CJS3_1123	PWY-3341	L-proline biosynthesis III
CJS3_1123	PWY-4981	L-proline biosynthesis II (from arginine)
CJS3_1123	PWY-6344	L-ornithine degradation II (Stickland reaction)
CJS3_1127	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJS3_1127	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CJS3_1128	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CJS3_1128	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CJS3_1128	PWY-6897	thiamin salvage II
CJS3_1128	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CJS3_1128	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CJS3_1128	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
CJS3_1128	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CJS3_1129	PWY-6910	hydroxymethylpyrimidine salvage
CJS3_1129	PWY-7356	thiamin salvage IV (yeast)
CJS3_1129	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CJS3_1135	PWY-2161	folate polyglutamylation
CJS3_1143	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CJS3_1143	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CJS3_1145	PWY-5686	UMP biosynthesis
CJS3_1151	PWY-7560	methylerythritol phosphate pathway II
CJS3_1161	PWY-5669	phosphatidylethanolamine biosynthesis I
CJS3_1162	PWY-5669	phosphatidylethanolamine biosynthesis I
CJS3_1177	PWY-3821	galactose degradation III
CJS3_1177	PWY-6317	galactose degradation I (Leloir pathway)
CJS3_1177	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CJS3_1177	PWY-6527	stachyose degradation
CJS3_1177	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CJS3_1177	PWY-7344	UDP-D-galactose biosynthesis
CJS3_1191	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CJS3_1198	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_1209	PWY-5481	pyruvate fermentation to lactate
CJS3_1209	PWY-6901	superpathway of glucose and xylose degradation
CJS3_1219	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_1228	PWY-3781	aerobic respiration I (cytochrome c)
CJS3_1228	PWY-6692	Fe(II) oxidation
CJS3_1228	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
CJS3_1228	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJS3_1238	PWY-5667	CDP-diacylglycerol biosynthesis I
CJS3_1238	PWY-5981	CDP-diacylglycerol biosynthesis III
CJS3_1240	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CJS3_1240	PWY-6153	autoinducer AI-2 biosynthesis I
CJS3_1240	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CJS3_1243	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CJS3_1243	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CJS3_1243	PWY-6936	seleno-amino acid biosynthesis
CJS3_1243	PWY-702	L-methionine biosynthesis II
CJS3_1244	PWY-2201	folate transformations I
CJS3_1244	PWY-3841	folate transformations II
CJS3_1256	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_1256	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_1261	PWY-6167	flavin biosynthesis II (archaea)
CJS3_1261	PWY-6168	flavin biosynthesis III (fungi)
CJS3_1261	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_1288	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CJS3_1288	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CJS3_1294	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_1296	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJS3_1296	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJS3_1296	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJS3_1315	PWY-723	alkylnitronates degradation
CJS3_1383	PWY-7183	pyrimidine nucleobases salvage I
CJS3_1385	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CJS3_1389	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CJS3_1390	PWY-6143	CMP-pseudaminate biosynthesis
CJS3_1390	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
CJS3_1390	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
CJS3_1390	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
CJS3_1398	PWY-4381	fatty acid biosynthesis initiation I
CJS3_1411	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJS3_1411	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJS3_1411	PWY-6143	CMP-pseudaminate biosynthesis
CJS3_1417	PWY-6143	CMP-pseudaminate biosynthesis
CJS3_1421	PWY-6749	CMP-legionaminate biosynthesis I
CJS3_1421	PWY-7131	CMP-legionaminate biosynthesis II
CJS3_1425	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CJS3_1425	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CJS3_1441	PWY-7560	methylerythritol phosphate pathway II
CJS3_1445	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CJS3_1446	PWY-6803	phosphatidylcholine acyl editing
CJS3_1446	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CJS3_1446	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CJS3_1446	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CJS3_1452	PWY-5674	nitrate reduction IV (dissimilatory)
CJS3_1462	PWY-5392	reductive TCA cycle II
CJS3_1462	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CJS3_1462	PWY-5690	TCA cycle II (plants and fungi)
CJS3_1462	PWY-5913	TCA cycle VI (obligate autotrophs)
CJS3_1462	PWY-6728	methylaspartate cycle
CJS3_1462	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CJS3_1462	PWY-7254	TCA cycle VII (acetate-producers)
CJS3_1462	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CJS3_1464	PWY-6749	CMP-legionaminate biosynthesis I
CJS3_1466	PWY-5198	factor 420 biosynthesis
CJS3_1466	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CJS3_1466	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CJS3_1472	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CJS3_1482	PWY-5506	methanol oxidation to formaldehyde IV
CJS3_1489	PWY-6123	inosine-5'-phosphate biosynthesis I
CJS3_1489	PWY-6124	inosine-5'-phosphate biosynthesis II
CJS3_1489	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_1489	PWY-7234	inosine-5'-phosphate biosynthesis III
CJS3_1495	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CJS3_1495	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CJS3_1495	PWY-5989	stearate biosynthesis II (bacteria and plants)
CJS3_1495	PWY-6113	superpathway of mycolate biosynthesis
CJS3_1495	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CJS3_1495	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CJS3_1495	PWY-7096	triclosan resistance
CJS3_1495	PWYG-321	mycolate biosynthesis
CJS3_1496	PWY-1042	glycolysis IV (plant cytosol)
CJS3_1496	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJS3_1496	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJS3_1496	PWY-7003	glycerol degradation to butanol
CJS3_1497	PWY-1042	glycolysis IV (plant cytosol)
CJS3_1497	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJS3_1497	PWY-6886	1-butanol autotrophic biosynthesis
CJS3_1497	PWY-6901	superpathway of glucose and xylose degradation
CJS3_1497	PWY-7003	glycerol degradation to butanol
CJS3_1498	PWY-1042	glycolysis IV (plant cytosol)
CJS3_1498	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJS3_1498	PWY-6901	superpathway of glucose and xylose degradation
CJS3_1498	PWY-7003	glycerol degradation to butanol
CJS3_1499	PWY-5381	pyridine nucleotide cycling (plants)
CJS3_1499	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CJS3_1502	PWY-6749	CMP-legionaminate biosynthesis I
CJS3_1504	PWY-6012	acyl carrier protein metabolism I
CJS3_1504	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CJS3_1514	PWY-5723	Rubisco shunt
CJS3_1517	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CJS3_1518	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CJS3_1520	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
CJS3_1539	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CJS3_1539	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CJS3_1539	PWY-6896	thiamin salvage I
CJS3_1539	PWY-6897	thiamin salvage II
CJS3_1569	PWY-3781	aerobic respiration I (cytochrome c)
CJS3_1569	PWY-4521	arsenite oxidation I (respiratory)
CJS3_1569	PWY-6692	Fe(II) oxidation
CJS3_1569	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJS3_1570	PWY-3781	aerobic respiration I (cytochrome c)
CJS3_1570	PWY-4521	arsenite oxidation I (respiratory)
CJS3_1570	PWY-6692	Fe(II) oxidation
CJS3_1570	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CJS3_1574	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CJS3_1574	PWY-5686	UMP biosynthesis
CJS3_1574	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CJS3_1578	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CJS3_1582	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CJS3_1582	PWY-6853	ethylene biosynthesis II (microbes)
CJS3_1582	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CJS3_1583	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CJS3_1595	PWY-6562	norspermidine biosynthesis
CJS3_1598	PWY-6823	molybdenum cofactor biosynthesis
CJS3_1600	PWY-6823	molybdenum cofactor biosynthesis
CJS3_1607	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CJS3_1607	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CJS3_1607	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CJS3_1609	PWY-2941	L-lysine biosynthesis II
CJS3_1609	PWY-5097	L-lysine biosynthesis VI
CJS3_1613	PWY-3801	sucrose degradation II (sucrose synthase)
CJS3_1613	PWY-5054	sorbitol biosynthesis I
CJS3_1613	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CJS3_1613	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CJS3_1613	PWY-5659	GDP-mannose biosynthesis
CJS3_1613	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJS3_1613	PWY-621	sucrose degradation III (sucrose invertase)
CJS3_1613	PWY-622	starch biosynthesis
CJS3_1613	PWY-6531	mannitol cycle
CJS3_1613	PWY-6981	chitin biosynthesis
CJS3_1613	PWY-7238	sucrose biosynthesis II
CJS3_1613	PWY-7347	sucrose biosynthesis III
CJS3_1613	PWY-7385	1,3-propanediol biosynthesis (engineered)
CJS3_1614	PWY-3801	sucrose degradation II (sucrose synthase)
CJS3_1614	PWY-6527	stachyose degradation
CJS3_1614	PWY-6981	chitin biosynthesis
CJS3_1614	PWY-7238	sucrose biosynthesis II
CJS3_1614	PWY-7343	UDP-glucose biosynthesis
CJS3_1615	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CJS3_1615	PWY-7118	chitin degradation to ethanol
CJS3_1665	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_1665	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_1688	PWY-7560	methylerythritol phosphate pathway II
CJS3_1690	PWY-5278	sulfite oxidation III
CJS3_1690	PWY-5340	sulfate activation for sulfonation
CJS3_1690	PWY-6683	sulfate reduction III (assimilatory)
CJS3_1690	PWY-6932	selenate reduction
CJS3_1691	PWY-5269	cardiolipin biosynthesis II
CJS3_1691	PWY-5668	cardiolipin biosynthesis I
CJS3_1694	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CJS3_1694	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CJS3_1716	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CJS3_1727	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CJS3_1727	PWY-5723	Rubisco shunt
CJS3_1727	PWY-6891	thiazole biosynthesis II (Bacillus)
CJS3_1727	PWY-6892	thiazole biosynthesis I (E. coli)
CJS3_1727	PWY-6901	superpathway of glucose and xylose degradation
CJS3_1727	PWY-7560	methylerythritol phosphate pathway II
CJS3_1734	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_1734	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_1754	PWY-1042	glycolysis IV (plant cytosol)
CJS3_1754	PWY-1622	formaldehyde assimilation I (serine pathway)
CJS3_1754	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CJS3_1754	PWY-5484	glycolysis II (from fructose 6-phosphate)
CJS3_1754	PWY-5723	Rubisco shunt
CJS3_1754	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CJS3_1754	PWY-6886	1-butanol autotrophic biosynthesis
CJS3_1754	PWY-6901	superpathway of glucose and xylose degradation
CJS3_1754	PWY-7003	glycerol degradation to butanol
CJS3_1754	PWY-7124	ethylene biosynthesis V (engineered)
CJS3_1754	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CJS3_1758	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CJS3_1758	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CJS3_1763	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CJS3_1797	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CJS3_1798	PWY-6871	3-methylbutanol biosynthesis
CJS3_1801	PWY-6700	queuosine biosynthesis
CJS3_1804	PWY-5344	L-homocysteine biosynthesis
CJS3_1804	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
