RATSFB_0001	SSF48295	TrpR-like
RATSFB_0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0002	SSF55979	DNA clamp
RATSFB_0003	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0005	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_0005	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0005	SSF56719	Type II DNA topoisomerase
RATSFB_0006	SSF101904	GyrA/ParC C-terminal domain-like
RATSFB_0006	SSF56719	Type II DNA topoisomerase
RATSFB_0007	SSF109604	HD-domain/PDEase-like
RATSFB_0008	SSF46589	tRNA-binding arm
RATSFB_0008	SSF55681	Class II aaRS and biotin synthetases
RATSFB_0010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0011	SSF52980	Restriction endonuclease-like
RATSFB_0012	SSF81301	Nucleotidyltransferase
RATSFB_0012	SSF81891	Poly A polymerase C-terminal region-like
RATSFB_0013	SSF109604	HD-domain/PDEase-like
RATSFB_0013	SSF50249	Nucleic acid-binding proteins
RATSFB_0015	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
RATSFB_0016	SSF53474	alpha/beta-Hydrolases
RATSFB_0017	SSF53474	alpha/beta-Hydrolases
RATSFB_0019	SSF46689	Homeodomain-like
RATSFB_0020	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
RATSFB_0021	SSF48150	DNA-glycosylase
RATSFB_0029	SSF52954	Class II aaRS ABD-related
RATSFB_0029	SSF55681	Class II aaRS and biotin synthetases
RATSFB_0029	SSF64586	C-terminal domain of ProRS
RATSFB_0030	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0031	SSF54631	CBS-domain pair
RATSFB_0031	SSF56176	FAD-binding/transporter-associated domain-like
RATSFB_0032	SSF53927	Cytidine deaminase-like
RATSFB_0033	SSF48019	post-AAA+ oligomerization domain-like
RATSFB_0033	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0034	SSF82607	YbaB-like
RATSFB_0035	SSF111304	Recombination protein RecR
RATSFB_0038	SSF53167	Purine and uridine phosphorylases
RATSFB_0039	SSF69572	Activating enzymes of the ubiquitin-like proteins
RATSFB_0040	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RATSFB_0041	SSF53790	Tetrapyrrole methylase
RATSFB_0042	SSF89447	AbrB/MazE/MraZ-like
RATSFB_0043	SSF55166	Hedgehog/DD-peptidase
RATSFB_0046	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_0047	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_0049	SSF49384	Carbohydrate-binding domain
RATSFB_0052	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_0055	SSF159283	Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
RATSFB_0055	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_0056	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_0057	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_0058	SSF52499	Isochorismatase-like hydrolases
RATSFB_0059	SSF50249	Nucleic acid-binding proteins
RATSFB_0060	SSF52218	Flavoproteins
RATSFB_0060	SSF56281	Metallo-hydrolase/oxidoreductase
RATSFB_0062	SSF56214	4'-phosphopantetheinyl transferase
RATSFB_0064	SSF50621	Alanine racemase C-terminal domain-like
RATSFB_0064	SSF51419	PLP-binding barrel
RATSFB_0066	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
RATSFB_0067	SSF49785	Galactose-binding domain-like
RATSFB_0068	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0070	SSF50156	PDZ domain-like
RATSFB_0070	SSF52096	ClpP/crotonase
RATSFB_0072	SSF46600	C-terminal UvrC-binding domain of UvrB
RATSFB_0072	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0073	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0075	SSF56519	Penicillin binding protein dimerisation domain
RATSFB_0075	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0076	SSF46600	C-terminal UvrC-binding domain of UvrB
RATSFB_0076	SSF47781	RuvA domain 2-like
RATSFB_0076	SSF82771	GIY-YIG endonuclease
RATSFB_0077	SSF56176	FAD-binding/transporter-associated domain-like
RATSFB_0077	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
RATSFB_0078	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0079	SSF142338	CofD-like
RATSFB_0080	SSF55608	Homing endonucleases
RATSFB_0082	SSF52402	Adenine nucleotide alpha hydrolases-like
RATSFB_0082	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RATSFB_0083	SSF89550	PHP domain-like
RATSFB_0084	SSF53784	Phosphofructokinase
RATSFB_0085	SSF50800	PK beta-barrel domain-like
RATSFB_0085	SSF51621	Phosphoenolpyruvate/pyruvate domain
RATSFB_0085	SSF52935	PK C-terminal domain-like
RATSFB_0086	SSF50249	Nucleic acid-binding proteins
RATSFB_0086	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0089	SSF51306	LexA/Signal peptidase
RATSFB_0090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0092	SSF160240	Cation efflux protein cytoplasmic domain-like
RATSFB_0092	SSF161111	Cation efflux protein transmembrane domain-like
RATSFB_0093	SSF53633	Carbamate kinase-like
RATSFB_0093	SSF55021	ACT-like
RATSFB_0094	SSF50621	Alanine racemase C-terminal domain-like
RATSFB_0094	SSF51419	PLP-binding barrel
RATSFB_0096	SSF101821	Aminopeptidase/glucanase lid domain
RATSFB_0096	SSF53187	Zn-dependent exopeptidases
RATSFB_0097	SSF69765	IpsF-like
RATSFB_0098	SSF55120	Pseudouridine synthase
RATSFB_0098	SSF55174	Alpha-L RNA-binding motif
RATSFB_0110	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0116	SSF53649	Alkaline phosphatase-like
RATSFB_0117	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RATSFB_0118	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0119	SSF161098	MetI-like
RATSFB_0120	SSF53850	Periplasmic binding protein-like II
RATSFB_0122	SSF56024	Phospholipase D/nuclease
RATSFB_0123	SSF49303	beta-Galactosidase/glucuronidase domain
RATSFB_0123	SSF49785	Galactose-binding domain-like
RATSFB_0123	SSF49899	Concanavalin A-like lectins/glucanases
RATSFB_0123	SSF51445	(Trans)glycosidases
RATSFB_0123	SSF74650	Galactose mutarotase-like
RATSFB_0124	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RATSFB_0125	SSF53822	Periplasmic binding protein-like I
RATSFB_0126	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0130	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0130	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RATSFB_0131	SSF53748	Phosphoglycerate kinase
RATSFB_0132	SSF51351	Triosephosphate isomerase (TIM)
RATSFB_0133	SSF53649	Alkaline phosphatase-like
RATSFB_0133	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
RATSFB_0134	SSF51604	Enolase C-terminal domain-like
RATSFB_0134	SSF54826	Enolase N-terminal domain-like
RATSFB_0135	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0135	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RATSFB_0136	SSF52304	Type II 3-dehydroquinate dehydratase
RATSFB_0137	SSF48600	Chorismate mutase II
RATSFB_0137	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0139	SSF50249	Nucleic acid-binding proteins
RATSFB_0140	SSF74982	Small protein B (SmpB)
RATSFB_0142	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0145	SSF49265	Fibronectin type III
RATSFB_0147	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RATSFB_0149	SSF52794	PTS system IIB component-like
RATSFB_0149	SSF55804	Phoshotransferase/anion transport protein
RATSFB_0150	SSF55804	Phoshotransferase/anion transport protein
RATSFB_0150	SSF63520	PTS-regulatory domain, PRD
RATSFB_0151	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RATSFB_0151	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0152	SSF53187	Zn-dependent exopeptidases
RATSFB_0154	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0156	SSF52402	Adenine nucleotide alpha hydrolases-like
RATSFB_0156	SSF56317	Carbon-nitrogen hydrolase
RATSFB_0157	SSF52141	Uracil-DNA glycosylase-like
RATSFB_0158	SSF50621	Alanine racemase C-terminal domain-like
RATSFB_0158	SSF51419	PLP-binding barrel
RATSFB_0160	SSF54506	Diaminopimelate epimerase-like
RATSFB_0161	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0163	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0165	SSF53720	ALDH-like
RATSFB_0166	SSF51445	(Trans)glycosidases
RATSFB_0167	SSF100950	NagB/RpiA/CoA transferase-like
RATSFB_0168	SSF158682	TerB-like
RATSFB_0170	SSF50978	WD40 repeat-like
RATSFB_0171	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0172	SSF56276	S-adenosylmethionine decarboxylase
RATSFB_0173	SSF52402	Adenine nucleotide alpha hydrolases-like
RATSFB_0174	SSF46689	Homeodomain-like
RATSFB_0176	SSF50715	Ribosomal protein L25-like
RATSFB_0176	SSF52374	Nucleotidylyl transferase
RATSFB_0177	SSF51445	(Trans)glycosidases
RATSFB_0177	SSF53187	Zn-dependent exopeptidases
RATSFB_0178	SSF51306	LexA/Signal peptidase
RATSFB_0180	SSF55008	HMA, heavy metal-associated domain
RATSFB_0180	SSF56784	HAD-like
RATSFB_0180	SSF81653	Calcium ATPase, transduction domain A
RATSFB_0180	SSF81665	Calcium ATPase, transmembrane domain M
RATSFB_0181	SSF50199	Staphylococcal nuclease
RATSFB_0182	SSF55008	HMA, heavy metal-associated domain
RATSFB_0184	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RATSFB_0184	SSF50677	ValRS/IleRS/LeuRS editing domain
RATSFB_0184	SSF52374	Nucleotidylyl transferase
RATSFB_0185	SSF47413	lambda repressor-like DNA-binding domains
RATSFB_0185	SSF53822	Periplasmic binding protein-like I
RATSFB_0189	SSF53092	Creatinase/prolidase N-terminal domain
RATSFB_0189	SSF55920	Creatinase/aminopeptidase
RATSFB_0193	SSF50249	Nucleic acid-binding proteins
RATSFB_0194	SSF53187	Zn-dependent exopeptidases
RATSFB_0195	SSF144091	Rhomboid-like
RATSFB_0197	SSF51338	Composite domain of metallo-dependent hydrolases
RATSFB_0197	SSF51556	Metallo-dependent hydrolases
RATSFB_0201	SSF47807	5' to 3' exonuclease, C-terminal subdomain
RATSFB_0201	SSF53098	Ribonuclease H-like
RATSFB_0201	SSF56672	DNA/RNA polymerases
RATSFB_0201	SSF88723	PIN domain-like
RATSFB_0202	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0203	SSF53955	Lysozyme-like
RATSFB_0204	SSF51182	RmlC-like cupins
RATSFB_0207	SSF51366	Ribulose-phoshate binding barrel
RATSFB_0208	SSF88713	Glycoside hydrolase/deacetylase
RATSFB_0209	SSF46894	C-terminal effector domain of the bipartite response regulators
RATSFB_0209	SSF52172	CheY-like
RATSFB_0210	SSF158472	HAMP domain-like
RATSFB_0210	SSF47384	Homodimeric domain of signal transducing histidine kinase
RATSFB_0210	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0212	SSF64307	SirA-like
RATSFB_0212	SSF75169	DsrEFH-like
RATSFB_0213	SSF103084	Holliday junction resolvase RusA
RATSFB_0214	SSF53067	Actin-like ATPase domain
RATSFB_0215	SSF53474	alpha/beta-Hydrolases
RATSFB_0216	SSF50156	PDZ domain-like
RATSFB_0216	SSF50494	Trypsin-like serine proteases
RATSFB_0217	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0218	SSF51366	Ribulose-phoshate binding barrel
RATSFB_0219	SSF51569	Aldolase
RATSFB_0221	SSF53067	Actin-like ATPase domain
RATSFB_0223	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0224	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RATSFB_0225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0226	SSF53807	"Helical backbone" metal receptor
RATSFB_0228	SSF144091	Rhomboid-like
RATSFB_0229	SSF144091	Rhomboid-like
RATSFB_0232	SSF51261	Duplicated hybrid motif
RATSFB_0234	SSF102735	Trigger factor ribosome-binding domain
RATSFB_0234	SSF109998	Triger factor/SurA peptide-binding domain-like
RATSFB_0234	SSF54534	FKBP-like
RATSFB_0235	SSF52096	ClpP/crotonase
RATSFB_0236	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0236	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RATSFB_0237	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0241	SSF53187	Zn-dependent exopeptidases
RATSFB_0241	SSF55031	Bacterial exopeptidase dimerisation domain
RATSFB_0242	SSF55120	Pseudouridine synthase
RATSFB_0242	SSF55174	Alpha-L RNA-binding motif
RATSFB_0246	SSF48537	Phospholipase C/P1 nuclease
RATSFB_0247	SSF81573	F1F0 ATP synthase subunit B, membrane domain
RATSFB_0249	SSF81333	F1F0 ATP synthase subunit C
RATSFB_0250	SSF160527	V-type ATPase subunit E-like
RATSFB_0251	SSF103486	V-type ATP synthase subunit C
RATSFB_0252	SSF159468	AtpF-like
RATSFB_0253	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
RATSFB_0253	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
RATSFB_0253	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0254	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0256	SSF51306	LexA/Signal peptidase
RATSFB_0257	SSF159283	Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
RATSFB_0257	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_0261	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0261	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0262	SSF48150	DNA-glycosylase
RATSFB_0262	SSF55945	TATA-box binding protein-like
RATSFB_0265	SSF50729	PH domain-like
RATSFB_0268	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0269	SSF158221	YnzC-like
RATSFB_0270	SSF53795	PEP carboxykinase-like
RATSFB_0270	SSF75138	HprK N-terminal domain-like
RATSFB_0271	SSF143865	CorA soluble domain-like
RATSFB_0271	SSF144083	Magnesium transport protein CorA, transmembrane region
RATSFB_0272	SSF101821	Aminopeptidase/glucanase lid domain
RATSFB_0272	SSF53187	Zn-dependent exopeptidases
RATSFB_0274	SSF56784	HAD-like
RATSFB_0275	SSF52728	PTS IIb component
RATSFB_0275	SSF53062	PTS system fructose IIA component-like
RATSFB_0280	SSF46689	Homeodomain-like
RATSFB_0281	SSF51905	FAD/NAD(P)-binding domain
RATSFB_0282	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0284	SSF117892	Band 7/SPFH domain
RATSFB_0286	SSF103473	MFS general substrate transporter
RATSFB_0287	SSF143100	TTHA1013/TTHA0281-like
RATSFB_0288	SSF55154	CYTH-like phosphatases
RATSFB_0289	SSF53807	"Helical backbone" metal receptor
RATSFB_0290	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RATSFB_0291	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0292	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0293	SSF53167	Purine and uridine phosphorylases
RATSFB_0294	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0297	SSF52172	CheY-like
RATSFB_0298	SSF47384	Homodimeric domain of signal transducing histidine kinase
RATSFB_0298	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0302	SSF56784	HAD-like
RATSFB_0302	SSF81653	Calcium ATPase, transduction domain A
RATSFB_0302	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
RATSFB_0302	SSF81665	Calcium ATPase, transmembrane domain M
RATSFB_0303	SSF158397	TM1646-like
RATSFB_0306	SSF47240	Ferritin-like
RATSFB_0306	SSF57802	Rubredoxin-like
RATSFB_0308	SSF55326	PurM N-terminal domain-like
RATSFB_0308	SSF56042	PurM C-terminal domain-like
RATSFB_0309	SSF52972	ITPase-like
RATSFB_0310	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RATSFB_0310	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0311	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0311	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RATSFB_0312	SSF102198	Putative cyclase
RATSFB_0313	SSF88713	Glycoside hydrolase/deacetylase
RATSFB_0314	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0316	SSF47090	PGBD-like
RATSFB_0318	SSF51905	FAD/NAD(P)-binding domain
RATSFB_0318	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
RATSFB_0325	SSF54001	Cysteine proteinases
RATSFB_0327	SSF53067	Actin-like ATPase domain
RATSFB_0330	SSF56519	Penicillin binding protein dimerisation domain
RATSFB_0330	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0331	SSF63848	Cell-division inhibitor MinC, C-terminal domain
RATSFB_0332	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0333	SSF55229	Cell division protein MinE topological specificity domain
RATSFB_0336	SSF141091	L21p-like
RATSFB_0337	SSF118010	TM1457-like
RATSFB_0338	SSF110324	Ribosomal L27 protein-like
RATSFB_0339	SSF102741	Obg GTP-binding protein C-terminal domain
RATSFB_0339	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0339	SSF82051	Obg GTP-binding protein N-terminal domain
RATSFB_0340	SSF52374	Nucleotidylyl transferase
RATSFB_0341	SSF109604	HD-domain/PDEase-like
RATSFB_0342	SSF55120	Pseudouridine synthase
RATSFB_0343	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0344	SSF47781	RuvA domain 2-like
RATSFB_0345	SSF55326	PurM N-terminal domain-like
RATSFB_0345	SSF56042	PurM C-terminal domain-like
RATSFB_0346	SSF53383	PLP-dependent transferases
RATSFB_0347	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0347	SSF50447	Translation proteins
RATSFB_0347	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RATSFB_0347	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0350	SSF53187	Zn-dependent exopeptidases
RATSFB_0351	SSF50891	Cyclophilin-like
RATSFB_0352	SSF52954	Class II aaRS ABD-related
RATSFB_0352	SSF55186	ThrRS/AlaRS common domain
RATSFB_0352	SSF55681	Class II aaRS and biotin synthetases
RATSFB_0352	SSF81271	TGS-like
RATSFB_0353	SSF50129	GroES-like
RATSFB_0354	SSF48592	GroEL equatorial domain-like
RATSFB_0354	SSF52029	GroEL apical domain-like
RATSFB_0354	SSF54849	GroEL-intermediate domain like
RATSFB_0355	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RATSFB_0356	SSF54523	Pili subunits
RATSFB_0358	SSF161098	MetI-like
RATSFB_0359	SSF161098	MetI-like
RATSFB_0360	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0361	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0362	SSF53850	Periplasmic binding protein-like II
RATSFB_0363	SSF53850	Periplasmic binding protein-like II
RATSFB_0364	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
RATSFB_0365	SSF53597	Dihydrofolate reductase-like
RATSFB_0366	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
RATSFB_0367	SSF53067	Actin-like ATPase domain
RATSFB_0368	SSF51430	NAD(P)-linked oxidoreductase
RATSFB_0371	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0373	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0375	SSF52172	CheY-like
RATSFB_0376	SSF47384	Homodimeric domain of signal transducing histidine kinase
RATSFB_0380	SSF51261	Duplicated hybrid motif
RATSFB_0382	SSF54364	Translation initiation factor IF3, N-terminal domain
RATSFB_0382	SSF55200	Translation initiation factor IF3, C-terminal domain
RATSFB_0383	SSF143034	L35p-like
RATSFB_0384	SSF74731	Ribosomal protein L20
RATSFB_0386	SSF116726	TrkA C-terminal domain-like
RATSFB_0386	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0387	SSF55315	L30e-like
RATSFB_0387	SSF75217	alpha/beta knot
RATSFB_0388	SSF46589	tRNA-binding arm
RATSFB_0388	SSF55681	Class II aaRS and biotin synthetases
RATSFB_0389	SSF46955	Putative DNA-binding domain
RATSFB_0389	SSF50249	Nucleic acid-binding proteins
RATSFB_0389	SSF54991	Anticodon-binding domain of PheRS
RATSFB_0389	SSF55681	Class II aaRS and biotin synthetases
RATSFB_0389	SSF56037	PheT/TilS domain
RATSFB_0390	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0390	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RATSFB_0396	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0396	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RATSFB_0397	SSF51569	Aldolase
RATSFB_0398	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0398	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RATSFB_0400	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0400	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RATSFB_0400	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
RATSFB_0401	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RATSFB_0401	SSF52922	TK C-terminal domain-like
RATSFB_0402	SSF63411	LuxS/MPP-like metallohydrolase
RATSFB_0403	SSF56112	Protein kinase-like (PK-like)
RATSFB_0406	SSF52788	Phosphotyrosine protein phosphatases I
RATSFB_0408	SSF50249	Nucleic acid-binding proteins
RATSFB_0410	SSF64182	DHH phosphoesterases
RATSFB_0411	SSF47384	Homodimeric domain of signal transducing histidine kinase
RATSFB_0411	SSF55785	PYP-like sensor domain (PAS domain)
RATSFB_0411	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0412	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_0414	SSF48452	TPR-like
RATSFB_0418	SSF49265	Fibronectin type III
RATSFB_0419	SSF102829	Cell division protein ZapA-like
RATSFB_0420	SSF47240	Ferritin-like
RATSFB_0420	SSF57802	Rubredoxin-like
RATSFB_0421	SSF161111	Cation efflux protein transmembrane domain-like
RATSFB_0423	SSF53955	Lysozyme-like
RATSFB_0426	SSF46689	Homeodomain-like
RATSFB_0429	SSF160443	SMR domain-like
RATSFB_0429	SSF48334	DNA repair protein MutS, domain III
RATSFB_0429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0432	SSF109604	HD-domain/PDEase-like
RATSFB_0433	SSF55486	Metalloproteases ("zincins"), catalytic domain
RATSFB_0434	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
RATSFB_0435	SSF53927	Cytidine deaminase-like
RATSFB_0436	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0436	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RATSFB_0437	SSF50249	Nucleic acid-binding proteins
RATSFB_0437	SSF57863	ArfGap/RecO-like zinc finger
RATSFB_0438	SSF46934	UBA-like
RATSFB_0439	SSF51621	Phosphoenolpyruvate/pyruvate domain
RATSFB_0439	SSF52009	Phosphohistidine domain
RATSFB_0439	SSF56059	Glutathione synthetase ATP-binding domain-like
RATSFB_0440	SSF56112	Protein kinase-like (PK-like)
RATSFB_0441	SSF56731	DNA primase core
RATSFB_0441	SSF57783	Zinc beta-ribbon
RATSFB_0442	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RATSFB_0442	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RATSFB_0443	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0444	SSF102705	NIF3 (NGG1p interacting factor 3)-like
RATSFB_0445	SSF53474	alpha/beta-Hydrolases
RATSFB_0447	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_0448	SSF63446	Type I dockerin domain
RATSFB_0449	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
RATSFB_0449	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
RATSFB_0450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0451	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RATSFB_0452	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RATSFB_0452	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RATSFB_0457	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0457	SSF52821	Rhodanese/Cell cycle control phosphatase
RATSFB_0459	SSF56281	Metallo-hydrolase/oxidoreductase
RATSFB_0460	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RATSFB_0460	SSF52922	TK C-terminal domain-like
RATSFB_0460	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RATSFB_0460	SSF54862	4Fe-4S ferredoxins
RATSFB_0461	SSF51445	(Trans)glycosidases
RATSFB_0462	SSF46689	Homeodomain-like
RATSFB_0464	SSF56784	HAD-like
RATSFB_0465	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
RATSFB_0466	SSF50341	CheW-like
RATSFB_0467	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RATSFB_0468	SSF52738	Methylesterase CheB, C-terminal domain
RATSFB_0469	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
RATSFB_0469	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0470	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
RATSFB_0470	SSF47384	Homodimeric domain of signal transducing histidine kinase
RATSFB_0470	SSF50341	CheW-like
RATSFB_0470	SSF55052	CheY-binding domain of CheA
RATSFB_0470	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0471	SSF103039	CheC-like
RATSFB_0472	SSF52172	CheY-like
RATSFB_0473	SSF50341	CheW-like
RATSFB_0474	SSF101801	Surface presentation of antigens (SPOA)
RATSFB_0474	SSF103039	CheC-like
RATSFB_0475	SSF101801	Surface presentation of antigens (SPOA)
RATSFB_0475	SSF103039	CheC-like
RATSFB_0476	SSF140566	FlgN-like
RATSFB_0477	SSF64518	Phase 1 flagellin
RATSFB_0478	SSF64518	Phase 1 flagellin
RATSFB_0479	SSF141457	BH3618-like
RATSFB_0480	SSF117130	CsrA-like
RATSFB_0481	SSF101116	Flagellar export chaperone FliS
RATSFB_0484	SSF117143	Flagellar hook protein flgE
RATSFB_0485	SSF64518	Phase 1 flagellin
RATSFB_0486	SSF64518	Phase 1 flagellin
RATSFB_0487	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0490	SSF53474	alpha/beta-Hydrolases
RATSFB_0492	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
RATSFB_0494	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0495	SSF63562	RPB6/omega subunit-like
RATSFB_0496	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0497	SSF56420	Peptide deformylase
RATSFB_0498	SSF50486	FMT C-terminal domain-like
RATSFB_0498	SSF53328	Formyltransferase
RATSFB_0500	SSF48013	NusB-like
RATSFB_0500	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0501	SSF102114	Radical SAM enzymes
RATSFB_0502	SSF81606	PP2C-like
RATSFB_0503	SSF56112	Protein kinase-like (PK-like)
RATSFB_0504	SSF50249	Nucleic acid-binding proteins
RATSFB_0504	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0505	SSF63862	Thiamin pyrophosphokinase, substrate-binding domain
RATSFB_0505	SSF63999	Thiamin pyrophosphokinase, catalytic domain
RATSFB_0508	SSF56784	HAD-like
RATSFB_0508	SSF81653	Calcium ATPase, transduction domain A
RATSFB_0508	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
RATSFB_0508	SSF81665	Calcium ATPase, transmembrane domain M
RATSFB_0509	SSF50494	Trypsin-like serine proteases
RATSFB_0510	SSF89082	Antibiotic binding domain of TipA-like multidrug resistance regulators
RATSFB_0511	SSF143800	L28p-like
RATSFB_0513	SSF50249	Nucleic acid-binding proteins
RATSFB_0513	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0514	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0515	SSF52374	Nucleotidylyl transferase
RATSFB_0517	SSF56784	HAD-like
RATSFB_0519	SSF52374	Nucleotidylyl transferase
RATSFB_0520	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RATSFB_0521	SSF53067	Actin-like ATPase domain
RATSFB_0523	SSF57829	Zn-binding ribosomal proteins
RATSFB_0524	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
RATSFB_0525	SSF47336	ACP-like
RATSFB_0526	SSF54768	dsRNA-binding domain-like
RATSFB_0526	SSF69065	RNase III domain-like
RATSFB_0528	SSF51658	Xylose isomerase-like
RATSFB_0529	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0530	SSF160996	HI0933 insert domain-like
RATSFB_0530	SSF51905	FAD/NAD(P)-binding domain
RATSFB_0531	SSF50249	Nucleic acid-binding proteins
RATSFB_0531	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0532	SSF53098	Ribonuclease H-like
RATSFB_0532	SSF55658	L9 N-domain-like
RATSFB_0533	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
RATSFB_0535	SSF52317	Class I glutamine amidotransferase-like
RATSFB_0535	SSF52402	Adenine nucleotide alpha hydrolases-like
RATSFB_0537	SSF64518	Phase 1 flagellin
RATSFB_0538	SSF53850	Periplasmic binding protein-like II
RATSFB_0539	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0540	SSF161098	MetI-like
RATSFB_0542	SSF161098	MetI-like
RATSFB_0543	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
RATSFB_0543	SSF56300	Metallo-dependent phosphatases
RATSFB_0544	SSF51430	NAD(P)-linked oxidoreductase
RATSFB_0545	SSF50891	Cyclophilin-like
RATSFB_0545	SSF51445	(Trans)glycosidases
RATSFB_0546	SSF52794	PTS system IIB component-like
RATSFB_0546	SSF55804	Phoshotransferase/anion transport protein
RATSFB_0547	SSF53613	Ribokinase-like
RATSFB_0548	SSF48013	NusB-like
RATSFB_0550	SSF116842	XseB-like
RATSFB_0551	SSF48576	Terpenoid synthases
RATSFB_0552	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0552	SSF55174	Alpha-L RNA-binding motif
RATSFB_0553	SSF111331	NAD kinase/diacylglycerol kinase-like
RATSFB_0554	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0554	SSF55252	C-terminal domain of arginine repressor
RATSFB_0555	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0556	SSF50156	PDZ domain-like
RATSFB_0556	SSF50494	Trypsin-like serine proteases
RATSFB_0557	SSF46894	C-terminal effector domain of the bipartite response regulators
RATSFB_0557	SSF52172	CheY-like
RATSFB_0559	SSF51569	Aldolase
RATSFB_0560	SSF52266	SGNH hydrolase
RATSFB_0561	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0561	SSF75553	Smc hinge domain
RATSFB_0562	SSF47364	Domain of the SRP/SRP receptor G-proteins
RATSFB_0562	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0563	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RATSFB_0564	SSF47446	Signal peptide-binding domain
RATSFB_0564	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0565	SSF54565	Ribosomal protein S16
RATSFB_0566	SSF50346	PRC-barrel domain
RATSFB_0566	SSF50447	Translation proteins
RATSFB_0567	SSF75217	alpha/beta knot
RATSFB_0568	SSF50104	Translation proteins SH3-like domain
RATSFB_0569	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0570	SSF53098	Ribonuclease H-like
RATSFB_0571	SSF51395	FMN-linked oxidoreductases
RATSFB_0572	SSF52980	Restriction endonuclease-like
RATSFB_0575	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0581	SSF143430	TTP0101/SSO1404-like
RATSFB_0585	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0586	SSF116734	DNA methylase specificity domain
RATSFB_0587	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0590	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RATSFB_0591	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0591	SSF52794	PTS system IIB component-like
RATSFB_0591	SSF55804	Phoshotransferase/anion transport protein
RATSFB_0591	SSF63520	PTS-regulatory domain, PRD
RATSFB_0592	SSF55804	Phoshotransferase/anion transport protein
RATSFB_0594	SSF52794	PTS system IIB component-like
RATSFB_0595	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0596	SSF56024	Phospholipase D/nuclease
RATSFB_0597	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0597	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_0598	SSF102405	MCP/YpsA-like
RATSFB_0598	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0599	SSF56712	Prokaryotic type I DNA topoisomerase
RATSFB_0599	SSF57783	Zinc beta-ribbon
RATSFB_0600	SSF52313	Ribosomal protein S2
RATSFB_0601	SSF46934	UBA-like
RATSFB_0601	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
RATSFB_0602	SSF53633	Carbamate kinase-like
RATSFB_0603	SSF55194	Ribosome recycling factor, RRF
RATSFB_0604	SSF64005	Undecaprenyl diphosphate synthase
RATSFB_0606	SSF50156	PDZ domain-like
RATSFB_0607	SSF51717	Dihydropteroate synthetase-like
RATSFB_0607	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
RATSFB_0608	SSF50249	Nucleic acid-binding proteins
RATSFB_0608	SSF53098	Ribonuclease H-like
RATSFB_0609	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0609	SSF51206	cAMP-binding domain-like
RATSFB_0610	SSF74942	YhbC-like, C-terminal domain
RATSFB_0610	SSF75420	YhbC-like, N-terminal domain
RATSFB_0611	SSF50249	Nucleic acid-binding proteins
RATSFB_0611	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RATSFB_0611	SSF69705	Transcription factor NusA, N-terminal domain
RATSFB_0612	SSF64376	YlxR-like
RATSFB_0613	SSF50447	Translation proteins
RATSFB_0613	SSF52156	Initiation factor IF2/eIF5b, domain 3
RATSFB_0613	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0614	SSF89919	Ribosome-binding factor A, RbfA
RATSFB_0615	SSF64182	DHH phosphoesterases
RATSFB_0616	SSF55120	Pseudouridine synthase
RATSFB_0617	SSF52374	Nucleotidylyl transferase
RATSFB_0617	SSF82114	Riboflavin kinase-like
RATSFB_0618	SSF47060	S15/NS1 RNA-binding domain
RATSFB_0619	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
RATSFB_0619	SSF50249	Nucleic acid-binding proteins
RATSFB_0619	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_0619	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RATSFB_0619	SSF55666	Ribonuclease PH domain 2-like
RATSFB_0620	SSF50346	PRC-barrel domain
RATSFB_0621	SSF53633	Carbamate kinase-like
RATSFB_0621	SSF55021	ACT-like
RATSFB_0622	SSF52096	ClpP/crotonase
RATSFB_0623	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0623	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0624	SSF102114	Radical SAM enzymes
RATSFB_0626	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0626	SSF54752	RecA protein, C-terminal domain
RATSFB_0627	SSF109604	HD-domain/PDEase-like
RATSFB_0627	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
RATSFB_0629	SSF55594	HPr-like
RATSFB_0630	SSF56349	DNA breaking-rejoining enzymes
RATSFB_0631	SSF53383	PLP-dependent transferases
RATSFB_0632	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0633	SSF118116	DNA mismatch repair protein MutL
RATSFB_0633	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_0633	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0634	SSF48334	DNA repair protein MutS, domain III
RATSFB_0634	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0634	SSF53150	DNA repair protein MutS, domain II
RATSFB_0634	SSF55271	DNA repair protein MutS, domain I
RATSFB_0635	SSF102114	Radical SAM enzymes
RATSFB_0636	SSF116734	DNA methylase specificity domain
RATSFB_0638	SSF51695	PLC-like phosphodiesterases
RATSFB_0641	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0642	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0644	SSF53383	PLP-dependent transferases
RATSFB_0646	SSF53271	PRTase-like
RATSFB_0647	SSF89550	PHP domain-like
RATSFB_0649	SSF56112	Protein kinase-like (PK-like)
RATSFB_0650	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0652	SSF49299	PKD domain
RATSFB_0652	SSF49785	Galactose-binding domain-like
RATSFB_0653	SSF53067	Actin-like ATPase domain
RATSFB_0654	SSF50331	MOP-like
RATSFB_0654	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0656	SSF53850	Periplasmic binding protein-like II
RATSFB_0657	SSF74650	Galactose mutarotase-like
RATSFB_0657	SSF88688	Families 57/38 glycoside transferase middle domain
RATSFB_0657	SSF88713	Glycoside hydrolase/deacetylase
RATSFB_0658	SSF161098	MetI-like
RATSFB_0659	SSF161098	MetI-like
RATSFB_0660	SSF46689	Homeodomain-like
RATSFB_0660	SSF52172	CheY-like
RATSFB_0662	SSF48208	Six-hairpin glycosidases
RATSFB_0663	SSF51011	Glycosyl hydrolase domain
RATSFB_0663	SSF51445	(Trans)glycosidases
RATSFB_0663	SSF74650	Galactose mutarotase-like
RATSFB_0664	SSF52317	Class I glutamine amidotransferase-like
RATSFB_0665	SSF51366	Ribulose-phoshate binding barrel
RATSFB_0667	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0668	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
RATSFB_0668	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0669	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0670	SSF53187	Zn-dependent exopeptidases
RATSFB_0671	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RATSFB_0672	SSF116734	DNA methylase specificity domain
RATSFB_0673	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RATSFB_0674	SSF109755	PhoU-like
RATSFB_0675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0676	SSF161098	MetI-like
RATSFB_0677	SSF161098	MetI-like
RATSFB_0678	SSF53850	Periplasmic binding protein-like II
RATSFB_0679	SSF47384	Homodimeric domain of signal transducing histidine kinase
RATSFB_0679	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0680	SSF46894	C-terminal effector domain of the bipartite response regulators
RATSFB_0680	SSF52172	CheY-like
RATSFB_0681	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
RATSFB_0682	SSF50346	PRC-barrel domain
RATSFB_0683	SSF55008	HMA, heavy metal-associated domain
RATSFB_0683	SSF56784	HAD-like
RATSFB_0683	SSF81653	Calcium ATPase, transduction domain A
RATSFB_0683	SSF81665	Calcium ATPase, transmembrane domain M
RATSFB_0684	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RATSFB_0684	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RATSFB_0685	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RATSFB_0685	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RATSFB_0687	SSF52490	Tubulin nucleotide-binding domain-like
RATSFB_0687	SSF55307	Tubulin C-terminal domain-like
RATSFB_0688	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_0689	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0690	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RATSFB_0690	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RATSFB_0691	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0693	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0695	SSF158622	YheA/YmcA-like
RATSFB_0696	SSF56281	Metallo-hydrolase/oxidoreductase
RATSFB_0697	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0698	SSF53098	Ribonuclease H-like
RATSFB_0700	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
RATSFB_0700	SSF50447	Translation proteins
RATSFB_0700	SSF55186	ThrRS/AlaRS common domain
RATSFB_0700	SSF55681	Class II aaRS and biotin synthetases
RATSFB_0701	SSF52402	Adenine nucleotide alpha hydrolases-like
RATSFB_0702	SSF53383	PLP-dependent transferases
RATSFB_0703	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0704	SSF52096	ClpP/crotonase
RATSFB_0705	SSF52096	ClpP/crotonase
RATSFB_0706	SSF51246	Rudiment single hybrid motif
RATSFB_0706	SSF52440	PreATP-grasp domain
RATSFB_0706	SSF56059	Glutathione synthetase ATP-binding domain-like
RATSFB_0707	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RATSFB_0708	SSF51230	Single hybrid motif
RATSFB_0709	SSF53901	Thiolase-like
RATSFB_0710	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0711	SSF52151	FabD/lysophospholipase-like
RATSFB_0711	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
RATSFB_0712	SSF53901	Thiolase-like
RATSFB_0713	SSF53383	PLP-dependent transferases
RATSFB_0714	SSF50249	Nucleic acid-binding proteins
RATSFB_0714	SSF55261	GAD domain-like
RATSFB_0714	SSF55681	Class II aaRS and biotin synthetases
RATSFB_0715	SSF52954	Class II aaRS ABD-related
RATSFB_0715	SSF55681	Class II aaRS and biotin synthetases
RATSFB_0716	SSF56281	Metallo-hydrolase/oxidoreductase
RATSFB_0717	SSF109604	HD-domain/PDEase-like
RATSFB_0717	SSF55021	ACT-like
RATSFB_0717	SSF81271	TGS-like
RATSFB_0717	SSF81301	Nucleotidyltransferase
RATSFB_0718	SSF53271	PRTase-like
RATSFB_0719	SSF64182	DHH phosphoesterases
RATSFB_0720	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RATSFB_0721	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
RATSFB_0722	SSF102114	Radical SAM enzymes
RATSFB_0726	SSF51713	tRNA-guanine transglycosylase
RATSFB_0727	SSF111337	QueA-like
RATSFB_0728	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0728	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0729	SSF46929	DNA helicase RuvA subunit, C-terminal domain
RATSFB_0729	SSF47781	RuvA domain 2-like
RATSFB_0729	SSF50249	Nucleic acid-binding proteins
RATSFB_0731	SSF75625	YebC-like
RATSFB_0732	SSF101386	all-alpha NTP pyrophosphatases
RATSFB_0733	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_0733	SSF54980	EF-G C-terminal domain-like
RATSFB_0734	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0735	SSF53955	Lysozyme-like
RATSFB_0735	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0736	SSF56300	Metallo-dependent phosphatases
RATSFB_0738	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0738	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RATSFB_0739	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_0740	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_0741	SSF88713	Glycoside hydrolase/deacetylase
RATSFB_0742	SSF103473	MFS general substrate transporter
RATSFB_0743	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0746	SSF118352	HSP33 redox switch-like
RATSFB_0746	SSF64397	Hsp33 domain
RATSFB_0748	SSF50156	PDZ domain-like
RATSFB_0748	SSF50494	Trypsin-like serine proteases
RATSFB_0749	SSF56796	Dehydroquinate synthase-like
RATSFB_0751	SSF55120	Pseudouridine synthase
RATSFB_0751	SSF55174	Alpha-L RNA-binding motif
RATSFB_0753	SSF55174	Alpha-L RNA-binding motif
RATSFB_0758	SSF53244	MurD-like peptide ligases, peptide-binding domain
RATSFB_0758	SSF53623	MurD-like peptide ligases, catalytic domain
RATSFB_0758	SSF63418	MurE/MurF N-terminal domain
RATSFB_0759	SSF53244	MurD-like peptide ligases, peptide-binding domain
RATSFB_0759	SSF53623	MurD-like peptide ligases, catalytic domain
RATSFB_0759	SSF63418	MurE/MurF N-terminal domain
RATSFB_0760	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
RATSFB_0760	SSF56519	Penicillin binding protein dimerisation domain
RATSFB_0760	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0762	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0762	SSF81799	Putative methyltransferase TM0872, insert domain
RATSFB_0763	SSF63411	LuxS/MPP-like metallohydrolase
RATSFB_0764	SSF63411	LuxS/MPP-like metallohydrolase
RATSFB_0769	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0769	SSF90123	ABC transporter transmembrane region
RATSFB_0770	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0770	SSF90123	ABC transporter transmembrane region
RATSFB_0771	SSF53920	Fe-only hydrogenase
RATSFB_0771	SSF54292	2Fe-2S ferredoxin-like
RATSFB_0771	SSF54862	4Fe-4S ferredoxins
RATSFB_0772	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0773	SSF102114	Radical SAM enzymes
RATSFB_0774	SSF102114	Radical SAM enzymes
RATSFB_0775	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0775	SSF81271	TGS-like
RATSFB_0776	SSF88713	Glycoside hydrolase/deacetylase
RATSFB_0778	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_0779	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_0781	SSF48452	TPR-like
RATSFB_0782	SSF53738	Phosphoglucomutase, first 3 domains
RATSFB_0782	SSF55957	Phosphoglucomutase, C-terminal domain
RATSFB_0783	SSF50715	Ribosomal protein L25-like
RATSFB_0784	SSF53383	PLP-dependent transferases
RATSFB_0784	SSF55904	Ornithine decarboxylase C-terminal domain
RATSFB_0787	SSF54197	HIT-like
RATSFB_0788	SSF102114	Radical SAM enzymes
RATSFB_0789	SSF75217	alpha/beta knot
RATSFB_0789	SSF88697	PUA domain-like
RATSFB_0790	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0792	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0793	SSF48019	post-AAA+ oligomerization domain-like
RATSFB_0793	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0794	SSF46565	Chaperone J-domain
RATSFB_0794	SSF49493	HSP40/DnaJ peptide-binding domain
RATSFB_0794	SSF57938	DnaJ/Hsp40 cysteine-rich domain
RATSFB_0795	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
RATSFB_0795	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
RATSFB_0795	SSF53067	Actin-like ATPase domain
RATSFB_0796	SSF51064	Head domain of nucleotide exchange factor GrpE
RATSFB_0796	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
RATSFB_0797	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0797	SSF55781	GAF domain-like
RATSFB_0798	SSF102114	Radical SAM enzymes
RATSFB_0799	SSF50447	Translation proteins
RATSFB_0799	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0799	SSF54980	EF-G C-terminal domain-like
RATSFB_0801	SSF53163	HybD-like
RATSFB_0802	SSF46992	Ribosomal protein S20
RATSFB_0803	SSF48019	post-AAA+ oligomerization domain-like
RATSFB_0803	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0806	SSF53901	Thiolase-like
RATSFB_0813	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0815	SSF48029	FliG
RATSFB_0818	SSF64518	Phase 1 flagellin
RATSFB_0820	SSF118215	Proton glutamate symport protein
RATSFB_0821	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
RATSFB_0830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0831	SSF50104	Translation proteins SH3-like domain
RATSFB_0831	SSF50249	Nucleic acid-binding proteins
RATSFB_0840	SSF160246	EspE N-terminal domain-like
RATSFB_0840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0842	SSF50475	FMN-binding split barrel
RATSFB_0843	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0844	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RATSFB_0845	SSF53807	"Helical backbone" metal receptor
RATSFB_0846	SSF52833	Thioredoxin-like
RATSFB_0847	SSF103481	Multidrug resistance efflux transporter EmrE
RATSFB_0849	SSF51445	(Trans)glycosidases
RATSFB_0851	SSF52794	PTS system IIB component-like
RATSFB_0852	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0852	SSF56327	LDH C-terminal domain-like
RATSFB_0853	SSF51658	Xylose isomerase-like
RATSFB_0854	SSF53639	AraD/HMP-PK domain-like
RATSFB_0856	SSF52794	PTS system IIB component-like
RATSFB_0858	SSF55804	Phoshotransferase/anion transport protein
RATSFB_0859	SSF56281	Metallo-hydrolase/oxidoreductase
RATSFB_0860	SSF100950	NagB/RpiA/CoA transferase-like
RATSFB_0860	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0861	SSF110395	CutC-like
RATSFB_0862	SSF46458	Globin-like
RATSFB_0863	SSF48019	post-AAA+ oligomerization domain-like
RATSFB_0865	SSF55718	SCP-like
RATSFB_0866	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RATSFB_0866	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RATSFB_0867	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0868	SSF52091	SpoIIaa-like
RATSFB_0870	SSF53187	Zn-dependent exopeptidases
RATSFB_0871	SSF53850	Periplasmic binding protein-like II
RATSFB_0876	SSF88713	Glycoside hydrolase/deacetylase
RATSFB_0878	SSF64518	Phase 1 flagellin
RATSFB_0879	SSF53383	PLP-dependent transferases
RATSFB_0880	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RATSFB_0881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0881	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_0882	SSF57783	Zinc beta-ribbon
RATSFB_0883	SSF52743	Subtilisin-like
RATSFB_0884	SSF53697	SIS domain
RATSFB_0884	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
RATSFB_0888	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0888	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
RATSFB_0892	SSF52833	Thioredoxin-like
RATSFB_0898	SSF53383	PLP-dependent transferases
RATSFB_0899	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0900	SSF51161	Trimeric LpxA-like enzymes
RATSFB_0901	SSF50249	Nucleic acid-binding proteins
RATSFB_0902	SSF88713	Glycoside hydrolase/deacetylase
RATSFB_0904	SSF50969	YVTN repeat-like/Quinoprotein amine dehydrogenase
RATSFB_0905	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0906	SSF46589	tRNA-binding arm
RATSFB_0906	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RATSFB_0906	SSF50677	ValRS/IleRS/LeuRS editing domain
RATSFB_0906	SSF52374	Nucleotidylyl transferase
RATSFB_0907	SSF48452	TPR-like
RATSFB_0908	SSF54001	Cysteine proteinases
RATSFB_0910	SSF63411	LuxS/MPP-like metallohydrolase
RATSFB_0912	SSF47240	Ferritin-like
RATSFB_0912	SSF57802	Rubredoxin-like
RATSFB_0919	SSF53850	Periplasmic binding protein-like II
RATSFB_0920	SSF47781	RuvA domain 2-like
RATSFB_0920	SSF50249	Nucleic acid-binding proteins
RATSFB_0920	SSF52113	BRCT domain
RATSFB_0920	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
RATSFB_0921	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0922	SSF55120	Pseudouridine synthase
RATSFB_0922	SSF55174	Alpha-L RNA-binding motif
RATSFB_0923	SSF53955	Lysozyme-like
RATSFB_0925	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_0926	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0927	SSF53697	SIS domain
RATSFB_0930	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0935	SSF52317	Class I glutamine amidotransferase-like
RATSFB_0936	SSF51283	dUTPase-like
RATSFB_0939	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RATSFB_0942	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0943	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0944	SSF46894	C-terminal effector domain of the bipartite response regulators
RATSFB_0944	SSF52172	CheY-like
RATSFB_0945	SSF102705	NIF3 (NGG1p interacting factor 3)-like
RATSFB_0946	SSF117143	Flagellar hook protein flgE
RATSFB_0947	SSF117143	Flagellar hook protein flgE
RATSFB_0948	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
RATSFB_0948	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RATSFB_0950	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0951	SSF90123	ABC transporter transmembrane region
RATSFB_0952	SSF160544	EscU C-terminal domain-like
RATSFB_0957	SSF103088	OmpA-like
RATSFB_0959	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
RATSFB_0960	SSF48557	L-aspartase-like
RATSFB_0961	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_0961	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
RATSFB_0962	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0963	SSF46785	"Winged helix" DNA-binding domain
RATSFB_0965	SSF116734	DNA methylase specificity domain
RATSFB_0966	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_0966	SSF69189	Penicillin-binding protein associated domain
RATSFB_0967	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
RATSFB_0967	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
RATSFB_0967	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
RATSFB_0968	SSF143856	DeoB insert domain-like
RATSFB_0968	SSF53649	Alkaline phosphatase-like
RATSFB_0970	SSF55811	Nudix
RATSFB_0973	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0974	SSF56300	Metallo-dependent phosphatases
RATSFB_0975	SSF142433	CinA-like
RATSFB_0975	SSF53218	Molybdenum cofactor biosynthesis proteins
RATSFB_0976	SSF47384	Homodimeric domain of signal transducing histidine kinase
RATSFB_0976	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_0977	SSF46894	C-terminal effector domain of the bipartite response regulators
RATSFB_0977	SSF52172	CheY-like
RATSFB_0981	SSF48208	Six-hairpin glycosidases
RATSFB_0982	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0982	SSF90123	ABC transporter transmembrane region
RATSFB_0983	SSF53807	"Helical backbone" metal receptor
RATSFB_0984	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0985	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RATSFB_0986	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RATSFB_0988	SSF53807	"Helical backbone" metal receptor
RATSFB_0989	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RATSFB_0990	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
RATSFB_0991	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_0992	SSF103473	MFS general substrate transporter
RATSFB_0995	SSF51182	RmlC-like cupins
RATSFB_0996	SSF53187	Zn-dependent exopeptidases
RATSFB_0997	SSF50475	FMN-binding split barrel
RATSFB_0997	SSF57802	Rubredoxin-like
RATSFB_0998	SSF50249	Nucleic acid-binding proteins
RATSFB_0998	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1000	SSF46785	"Winged helix" DNA-binding domain
RATSFB_1001	SSF56634	Heme-dependent catalase-like
RATSFB_1002	SSF46785	"Winged helix" DNA-binding domain
RATSFB_1004	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RATSFB_1006	SSF47240	Ferritin-like
RATSFB_1007	SSF143880	NE0471 N-terminal domain-like
RATSFB_1011	SSF50249	Nucleic acid-binding proteins
RATSFB_1011	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_1012	SSF56796	Dehydroquinate synthase-like
RATSFB_1013	SSF56784	HAD-like
RATSFB_1014	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RATSFB_1015	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
RATSFB_1017	SSF51230	Single hybrid motif
RATSFB_1019	SSF51569	Aldolase
RATSFB_1019	SSF89000	post-HMGL domain-like
RATSFB_1021	SSF82649	SufE/NifU
RATSFB_1022	SSF53383	PLP-dependent transferases
RATSFB_1023	SSF101960	Stabilizer of iron transporter SufD
RATSFB_1024	SSF101960	Stabilizer of iron transporter SufD
RATSFB_1025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1027	SSF56784	HAD-like
RATSFB_1029	SSF48208	Six-hairpin glycosidases
RATSFB_1032	SSF56796	Dehydroquinate synthase-like
RATSFB_1033	SSF103263	Chorismate synthase, AroC
RATSFB_1034	SSF55205	EPT/RTPC-like
RATSFB_1035	SSF51569	Aldolase
RATSFB_1036	SSF51998	PFL-like glycyl radical enzymes
RATSFB_1039	SSF46785	"Winged helix" DNA-binding domain
RATSFB_1039	SSF54909	Dimeric alpha+beta barrel
RATSFB_1040	SSF53795	PEP carboxykinase-like
RATSFB_1041	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RATSFB_1042	SSF56281	Metallo-hydrolase/oxidoreductase
RATSFB_1043	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
RATSFB_1043	SSF52374	Nucleotidylyl transferase
RATSFB_1044	SSF53098	Ribonuclease H-like
RATSFB_1045	SSF50037	C-terminal domain of transcriptional repressors
RATSFB_1046	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1047	SSF48208	Six-hairpin glycosidases
RATSFB_1047	SSF74650	Galactose mutarotase-like
RATSFB_1048	SSF50998	Quinoprotein alcohol dehydrogenase-like
RATSFB_1049	SSF50182	Sm-like ribonucleoproteins
RATSFB_1049	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
RATSFB_1049	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
RATSFB_1052	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RATSFB_1052	SSF52374	Nucleotidylyl transferase
RATSFB_1052	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
RATSFB_1053	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_1054	SSF50037	C-terminal domain of transcriptional repressors
RATSFB_1054	SSF55681	Class II aaRS and biotin synthetases
RATSFB_1060	SSF52768	Arginase/deacetylase
RATSFB_1061	SSF53098	Ribonuclease H-like
RATSFB_1062	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_1062	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
RATSFB_1064	SSF53784	Phosphofructokinase
RATSFB_1066	SSF48452	TPR-like
RATSFB_1068	SSF53623	MurD-like peptide ligases, catalytic domain
RATSFB_1069	SSF52317	Class I glutamine amidotransferase-like
RATSFB_1072	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_1076	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_1077	SSF51338	Composite domain of metallo-dependent hydrolases
RATSFB_1077	SSF51556	Metallo-dependent hydrolases
RATSFB_1079	SSF51338	Composite domain of metallo-dependent hydrolases
RATSFB_1079	SSF51556	Metallo-dependent hydrolases
RATSFB_1080	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_1084	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1085	SSF56601	beta-lactamase/transpeptidase-like
RATSFB_1086	SSF88713	Glycoside hydrolase/deacetylase
RATSFB_1088	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1089	SSF53067	Actin-like ATPase domain
RATSFB_1090	SSF55729	Acyl-CoA N-acyltransferases (Nat)
RATSFB_1092	SSF158832	Tex N-terminal region-like
RATSFB_1092	SSF47781	RuvA domain 2-like
RATSFB_1092	SSF50249	Nucleic acid-binding proteins
RATSFB_1092	SSF53098	Ribonuclease H-like
RATSFB_1093	SSF75620	Release factor
RATSFB_1094	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1094	SSF81767	Pre-protein crosslinking domain of SecA
RATSFB_1094	SSF81886	Helical scaffold and wing domains of SecA
RATSFB_1095	SSF69754	Ribosome binding protein Y (YfiA homologue)
RATSFB_1096	SSF53271	PRTase-like
RATSFB_1098	SSF47781	RuvA domain 2-like
RATSFB_1098	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1099	SSF51338	Composite domain of metallo-dependent hydrolases
RATSFB_1099	SSF51556	Metallo-dependent hydrolases
RATSFB_1100	SSF55973	S-adenosylmethionine synthetase
RATSFB_1102	SSF51261	Duplicated hybrid motif
RATSFB_1104	SSF55205	EPT/RTPC-like
RATSFB_1105	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_1107	SSF53271	PRTase-like
RATSFB_1108	SSF52788	Phosphotyrosine protein phosphatases I
RATSFB_1109	SSF55821	YrdC/RibB
RATSFB_1110	SSF75620	Release factor
RATSFB_1111	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_1112	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1112	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RATSFB_1113	SSF143800	L28p-like
RATSFB_1114	SSF50249	Nucleic acid-binding proteins
RATSFB_1114	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1114	SSF68912	Rho N-terminal domain-like
RATSFB_1115	SSF52317	Class I glutamine amidotransferase-like
RATSFB_1115	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1116	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_1121	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_1121	SSF55060	GHMP Kinase, C-terminal domain
RATSFB_1122	SSF53244	MurD-like peptide ligases, peptide-binding domain
RATSFB_1122	SSF53623	MurD-like peptide ligases, catalytic domain
RATSFB_1122	SSF56059	Glutathione synthetase ATP-binding domain-like
RATSFB_1123	SSF52317	Class I glutamine amidotransferase-like
RATSFB_1124	SSF54106	LysM domain
RATSFB_1127	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_1128	SSF56112	Protein kinase-like (PK-like)
RATSFB_1129	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
RATSFB_1130	SSF51905	FAD/NAD(P)-binding domain
RATSFB_1131	SSF82549	DAK1/DegV-like
RATSFB_1132	SSF75217	alpha/beta knot
RATSFB_1134	SSF52440	PreATP-grasp domain
RATSFB_1134	SSF56059	Glutathione synthetase ATP-binding domain-like
RATSFB_1135	SSF48150	DNA-glycosylase
RATSFB_1136	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
RATSFB_1137	SSF46548	alpha-helical ferredoxin
RATSFB_1138	SSF158791	MgtE N-terminal domain-like
RATSFB_1138	SSF54631	CBS-domain pair
RATSFB_1142	SSF51569	Aldolase
RATSFB_1146	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1147	SSF50037	C-terminal domain of transcriptional repressors
RATSFB_1153	SSF53187	Zn-dependent exopeptidases
RATSFB_1154	SSF55486	Metalloproteases ("zincins"), catalytic domain
RATSFB_1155	SSF53474	alpha/beta-Hydrolases
RATSFB_1156	SSF55486	Metalloproteases ("zincins"), catalytic domain
RATSFB_1158	SSF47413	lambda repressor-like DNA-binding domains
RATSFB_1158	SSF53822	Periplasmic binding protein-like I
RATSFB_1159	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RATSFB_1159	SSF50677	ValRS/IleRS/LeuRS editing domain
RATSFB_1159	SSF52374	Nucleotidylyl transferase
RATSFB_1160	SSF89360	HesB-like domain
RATSFB_1161	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1162	SSF52374	Nucleotidylyl transferase
RATSFB_1164	SSF55073	Nucleotide cyclase
RATSFB_1164	SSF55781	GAF domain-like
RATSFB_1165	SSF56300	Metallo-dependent phosphatases
RATSFB_1166	SSF81301	Nucleotidyltransferase
RATSFB_1167	SSF50447	Translation proteins
RATSFB_1167	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1167	SSF54980	EF-G C-terminal domain-like
RATSFB_1169	SSF51735	NAD(P)-binding Rossmann-fold domains
RATSFB_1170	SSF52374	Nucleotidylyl transferase
RATSFB_1170	SSF55174	Alpha-L RNA-binding motif
RATSFB_1171	SSF48208	Six-hairpin glycosidases
RATSFB_1171	SSF74650	Galactose mutarotase-like
RATSFB_1172	SSF53720	ALDH-like
RATSFB_1172	SSF56796	Dehydroquinate synthase-like
RATSFB_1173	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_1175	SSF56784	HAD-like
RATSFB_1176	SSF53738	Phosphoglucomutase, first 3 domains
RATSFB_1176	SSF55957	Phosphoglucomutase, C-terminal domain
RATSFB_1177	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
RATSFB_1178	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RATSFB_1179	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RATSFB_1179	SSF52922	TK C-terminal domain-like
RATSFB_1180	SSF54862	4Fe-4S ferredoxins
RATSFB_1182	SSF143597	YojJ-like
RATSFB_1185	SSF52833	Thioredoxin-like
RATSFB_1186	SSF51556	Metallo-dependent hydrolases
RATSFB_1187	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
RATSFB_1187	SSF51621	Phosphoenolpyruvate/pyruvate domain
RATSFB_1187	SSF52009	Phosphohistidine domain
RATSFB_1189	SSF53187	Zn-dependent exopeptidases
RATSFB_1190	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_1191	SSF52161	Ribosomal protein L13
RATSFB_1192	SSF55120	Pseudouridine synthase
RATSFB_1194	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1195	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1196	SSF64263	Prokaryotic ribosomal protein L17
RATSFB_1197	SSF47789	C-terminal domain of RNA polymerase alpha subunit
RATSFB_1197	SSF55257	RBP11-like subunits of RNA polymerase
RATSFB_1197	SSF56553	Insert subdomain of RNA polymerase alpha subunit
RATSFB_1198	SSF55174	Alpha-L RNA-binding motif
RATSFB_1199	SSF53137	Translational machinery components
RATSFB_1200	SSF46946	S13-like H2TH domain
RATSFB_1201	SSF57840	Ribosomal protein L36
RATSFB_1202	SSF50249	Nucleic acid-binding proteins
RATSFB_1203	SSF55920	Creatinase/aminopeptidase
RATSFB_1204	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1204	SSF57774	Microbial and mitochondrial ADK, insert "zinc finger" domain
RATSFB_1205	SSF103491	Preprotein translocase SecY subunit
RATSFB_1206	SSF52080	Ribosomal proteins L15p and L18e
RATSFB_1207	SSF55129	Ribosomal protein L30p/L7e
RATSFB_1208	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_1208	SSF54768	dsRNA-binding domain-like
RATSFB_1209	SSF53137	Translational machinery components
RATSFB_1210	SSF56053	Ribosomal protein L6
RATSFB_1211	SSF56047	Ribosomal protein S8
RATSFB_1212	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
RATSFB_1213	SSF55282	RL5-like
RATSFB_1214	SSF50104	Translation proteins SH3-like domain
RATSFB_1215	SSF50193	Ribosomal protein L14
RATSFB_1216	SSF50249	Nucleic acid-binding proteins
RATSFB_1217	SSF46561	Ribosomal protein L29 (L29p)
RATSFB_1218	SSF54686	Ribosomal protein L16p/L10e
RATSFB_1219	SSF54814	Prokaryotic type KH domain (KH-domain type II)
RATSFB_1219	SSF54821	Ribosomal protein S3 C-terminal domain
RATSFB_1220	SSF54843	Ribosomal protein L22
RATSFB_1221	SSF54570	Ribosomal protein S19
RATSFB_1222	SSF50104	Translation proteins SH3-like domain
RATSFB_1222	SSF50249	Nucleic acid-binding proteins
RATSFB_1223	SSF54189	Ribosomal proteins S24e, L23 and L15e
RATSFB_1224	SSF52166	Ribosomal protein L4
RATSFB_1225	SSF50447	Translation proteins
RATSFB_1226	SSF54999	Ribosomal protein S10
RATSFB_1227	SSF50447	Translation proteins
RATSFB_1227	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RATSFB_1227	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1228	SSF50447	Translation proteins
RATSFB_1228	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1228	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_1228	SSF54980	EF-G C-terminal domain-like
RATSFB_1229	SSF47973	Ribosomal protein S7
RATSFB_1230	SSF50249	Nucleic acid-binding proteins
RATSFB_1231	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RATSFB_1232	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
RATSFB_1233	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
RATSFB_1233	SSF54736	ClpS-like
RATSFB_1234	SSF160369	Ribosomal protein L10-like
RATSFB_1235	SSF56808	Ribosomal protein L1
RATSFB_1236	SSF46906	Ribosomal protein L11, C-terminal domain
RATSFB_1236	SSF54747	Ribosomal L11/L12e N-terminal domain
RATSFB_1237	SSF50104	Translation proteins SH3-like domain
RATSFB_1237	SSF82679	N-utilization substance G protein NusG, N-terminal domain
RATSFB_1239	SSF50447	Translation proteins
RATSFB_1239	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
RATSFB_1239	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1240	SSF46894	C-terminal effector domain of the bipartite response regulators
RATSFB_1240	SSF88946	Sigma2 domain of RNA polymerase sigma factors
RATSFB_1242	SSF55315	L30e-like
RATSFB_1242	SSF75217	alpha/beta knot
RATSFB_1243	SSF69065	RNase III domain-like
RATSFB_1244	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RATSFB_1244	SSF52374	Nucleotidylyl transferase
RATSFB_1245	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_1246	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1246	SSF81923	Double Clp-N motif
RATSFB_1247	SSF55931	Glutamine synthetase/guanido kinase
RATSFB_1248	SSF46600	C-terminal UvrC-binding domain of UvrB
RATSFB_1249	SSF54862	4Fe-4S ferredoxins
RATSFB_1251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1252	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1253	SSF53383	PLP-dependent transferases
RATSFB_1253	SSF55904	Ornithine decarboxylase C-terminal domain
RATSFB_1254	SSF143865	CorA soluble domain-like
RATSFB_1254	SSF144083	Magnesium transport protein CorA, transmembrane region
RATSFB_1255	SSF141986	LD-carboxypeptidase A C-terminal domain-like
RATSFB_1255	SSF52317	Class I glutamine amidotransferase-like
RATSFB_1256	SSF51984	MurCD N-terminal domain
RATSFB_1256	SSF53244	MurD-like peptide ligases, peptide-binding domain
RATSFB_1256	SSF53623	MurD-like peptide ligases, catalytic domain
RATSFB_1257	SSF52954	Class II aaRS ABD-related
RATSFB_1257	SSF55681	Class II aaRS and biotin synthetases
RATSFB_1258	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1259	SSF53613	Ribokinase-like
RATSFB_1260	SSF102546	RbsD-like
RATSFB_1261	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1264	SSF53822	Periplasmic binding protein-like I
RATSFB_1265	SSF116734	DNA methylase specificity domain
RATSFB_1266	SSF50249	Nucleic acid-binding proteins
RATSFB_1266	SSF55681	Class II aaRS and biotin synthetases
RATSFB_1267	SSF46557	GreA transcript cleavage protein, N-terminal domain
RATSFB_1267	SSF54534	FKBP-like
RATSFB_1268	SSF51395	FMN-linked oxidoreductases
RATSFB_1269	SSF140990	FtsH protease domain-like
RATSFB_1269	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1270	SSF53271	PRTase-like
RATSFB_1271	SSF52402	Adenine nucleotide alpha hydrolases-like
RATSFB_1271	SSF56037	PheT/TilS domain
RATSFB_1271	SSF82829	MesJ substrate recognition domain-like
RATSFB_1272	SSF81606	PP2C-like
RATSFB_1273	SSF50249	Nucleic acid-binding proteins
RATSFB_1277	SSF55174	Alpha-L RNA-binding motif
RATSFB_1278	SSF47729	IHF-like DNA-binding proteins
RATSFB_1280	SSF55781	GAF domain-like
RATSFB_1280	SSF89447	AbrB/MazE/MraZ-like
RATSFB_1281	SSF109998	Triger factor/SurA peptide-binding domain-like
RATSFB_1281	SSF54534	FKBP-like
RATSFB_1282	SSF109998	Triger factor/SurA peptide-binding domain-like
RATSFB_1282	SSF54534	FKBP-like
RATSFB_1283	SSF53178	Peptidyl-tRNA hydrolase-like
RATSFB_1284	SSF50494	Trypsin-like serine proteases
RATSFB_1285	SSF158472	HAMP domain-like
RATSFB_1285	SSF47384	Homodimeric domain of signal transducing histidine kinase
RATSFB_1285	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
RATSFB_1286	SSF46894	C-terminal effector domain of the bipartite response regulators
RATSFB_1286	SSF52172	CheY-like
RATSFB_1287	SSF53271	PRTase-like
RATSFB_1288	SSF51161	Trimeric LpxA-like enzymes
RATSFB_1288	SSF53448	Nucleotide-diphospho-sugar transferases
RATSFB_1289	SSF50249	Nucleic acid-binding proteins
RATSFB_1289	SSF55681	Class II aaRS and biotin synthetases
RATSFB_1290	SSF56300	Metallo-dependent phosphatases
RATSFB_1291	SSF51984	MurCD N-terminal domain
RATSFB_1291	SSF53244	MurD-like peptide ligases, peptide-binding domain
RATSFB_1291	SSF53623	MurD-like peptide ligases, catalytic domain
RATSFB_1292	SSF160537	SpoVG-like
RATSFB_1293	SSF52949	Macro domain-like
RATSFB_1293	SSF53187	Zn-dependent exopeptidases
RATSFB_1294	SSF53474	alpha/beta-Hydrolases
RATSFB_1296	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_1297	SSF110455	Toprim domain
RATSFB_1298	SSF50685	Barwin-like endoglucanases
RATSFB_1299	SSF51556	Metallo-dependent hydrolases
RATSFB_1300	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RATSFB_1300	SSF52922	TK C-terminal domain-like
RATSFB_1301	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
RATSFB_1302	SSF53850	Periplasmic binding protein-like II
RATSFB_1304	SSF47090	PGBD-like
RATSFB_1306	SSF53681	Aspartate/glutamate racemase
RATSFB_1307	SSF55931	Glutamine synthetase/guanido kinase
RATSFB_1309	SSF102114	Radical SAM enzymes
RATSFB_1311	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1314	SSF53649	Alkaline phosphatase-like
RATSFB_1315	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
RATSFB_1315	SSF52374	Nucleotidylyl transferase
RATSFB_1316	SSF55653	Ribosomal protein L9 C-domain
RATSFB_1316	SSF55658	L9 N-domain-like
RATSFB_1317	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1317	SSF54211	Ribosomal protein S5 domain 2-like
RATSFB_1318	SSF47413	lambda repressor-like DNA-binding domains
RATSFB_1318	SSF51182	RmlC-like cupins
RATSFB_1319	SSF48024	N-terminal domain of DnaB helicase
RATSFB_1319	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1320	SSF75217	alpha/beta knot
RATSFB_1321	SSF75217	alpha/beta knot
RATSFB_1322	SSF103642	Sec-C motif
RATSFB_1323	SSF56281	Metallo-hydrolase/oxidoreductase
RATSFB_1324	SSF55205	EPT/RTPC-like
RATSFB_1327	SSF52743	Subtilisin-like
RATSFB_1328	SSF51261	Duplicated hybrid motif
RATSFB_1329	SSF158499	DnaD domain-like
RATSFB_1330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1331	SSF46911	Ribosomal protein S18
RATSFB_1332	SSF50249	Nucleic acid-binding proteins
RATSFB_1333	SSF54995	Ribosomal protein S6
RATSFB_1335	SSF53383	PLP-dependent transferases
RATSFB_1336	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1337	SSF109709	KorB DNA-binding domain-like
RATSFB_1337	SSF110849	ParB/Sulfiredoxin
RATSFB_1339	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
RATSFB_1340	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
RATSFB_1341	SSF51905	FAD/NAD(P)-binding domain
RATSFB_1342	SSF52540	P-loop containing nucleoside triphosphate hydrolases
RATSFB_1345	SSF54211	Ribosomal protein S5 domain 2-like