BVAF_006	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_008	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_010	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BVAF_021	PWY-6854	ethylene biosynthesis III (microbes)
BVAF_031	PWY-4981	L-proline biosynthesis II (from arginine)
BVAF_031	PWY-4984	urea cycle
BVAF_031	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BVAF_034	PWY-5988	wound-induced proteolysis I
BVAF_034	PWY-6018	seed germination protein turnover
BVAF_046	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BVAF_046	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BVAF_061	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BVAF_061	PWY-6148	tetrahydromethanopterin biosynthesis
BVAF_061	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BVAF_061	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BVAF_065	PWY-6167	flavin biosynthesis II (archaea)
BVAF_065	PWY-6168	flavin biosynthesis III (fungi)
BVAF_066	PWY-5667	CDP-diacylglycerol biosynthesis I
BVAF_066	PWY-5981	CDP-diacylglycerol biosynthesis III
BVAF_066	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
BVAF_066	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
BVAF_067	PWY-6936	seleno-amino acid biosynthesis
BVAF_074	PWY-5669	phosphatidylethanolamine biosynthesis I
BVAF_079	PWY-2781	<i>cis</i>-zeatin biosynthesis
BVAF_083	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_099	PWY-6614	tetrahydrofolate biosynthesis
BVAF_100	PWY-6749	CMP-legionaminate biosynthesis I
BVAF_112	PWY-2941	L-lysine biosynthesis II
BVAF_112	PWY-2942	L-lysine biosynthesis III
BVAF_112	PWY-5097	L-lysine biosynthesis VI
BVAF_112	PWY-6559	spermidine biosynthesis II
BVAF_112	PWY-6562	norspermidine biosynthesis
BVAF_112	PWY-7153	grixazone biosynthesis
BVAF_113	PWY-702	L-methionine biosynthesis II
BVAF_118	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
BVAF_118	PWY-6167	flavin biosynthesis II (archaea)
BVAF_118	PWY-6168	flavin biosynthesis III (fungi)
BVAF_121	PWY-7560	methylerythritol phosphate pathway II
BVAF_122	PWY-2941	L-lysine biosynthesis II
BVAF_122	PWY-2942	L-lysine biosynthesis III
BVAF_122	PWY-5097	L-lysine biosynthesis VI
BVAF_123	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BVAF_123	PWY-5686	UMP biosynthesis
BVAF_123	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BVAF_124	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BVAF_124	PWY-5686	UMP biosynthesis
BVAF_124	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BVAF_125	PWY-3841	folate transformations II
BVAF_125	PWY-6614	tetrahydrofolate biosynthesis
BVAF_133	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BVAF_134	PWY-6871	3-methylbutanol biosynthesis
BVAF_139	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BVAF_139	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BVAF_140	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BVAF_140	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BVAF_140	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BVAF_141	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BVAF_141	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BVAF_143	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BVAF_143	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BVAF_143	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BVAF_143	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BVAF_144	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BVAF_144	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BVAF_151	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BVAF_151	PWY-6148	tetrahydromethanopterin biosynthesis
BVAF_151	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BVAF_151	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BVAF_152	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BVAF_152	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BVAF_154	PWY-6891	thiazole biosynthesis II (Bacillus)
BVAF_154	PWY-6892	thiazole biosynthesis I (E. coli)
BVAF_154	PWY-7560	methylerythritol phosphate pathway II
BVAF_155	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BVAF_155	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BVAF_155	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BVAF_155	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BVAF_157	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BVAF_157	PWY-7177	UTP and CTP dephosphorylation II
BVAF_157	PWY-7185	UTP and CTP dephosphorylation I
BVAF_158	PWY-1042	glycolysis IV (plant cytosol)
BVAF_158	PWY-1622	formaldehyde assimilation I (serine pathway)
BVAF_158	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BVAF_158	PWY-5484	glycolysis II (from fructose 6-phosphate)
BVAF_158	PWY-5723	Rubisco shunt
BVAF_158	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BVAF_158	PWY-6886	1-butanol autotrophic biosynthesis
BVAF_158	PWY-6901	superpathway of glucose and xylose degradation
BVAF_158	PWY-7003	glycerol degradation to butanol
BVAF_158	PWY-7124	ethylene biosynthesis V (engineered)
BVAF_158	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BVAF_159	PWY-6683	sulfate reduction III (assimilatory)
BVAF_160	PWY-6683	sulfate reduction III (assimilatory)
BVAF_162	PWY-5194	siroheme biosynthesis
BVAF_162	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BVAF_163	PWY-5278	sulfite oxidation III
BVAF_163	PWY-5340	sulfate activation for sulfonation
BVAF_163	PWY-6683	sulfate reduction III (assimilatory)
BVAF_163	PWY-6932	selenate reduction
BVAF_164	PWY-5278	sulfite oxidation III
BVAF_164	PWY-5340	sulfate activation for sulfonation
BVAF_164	PWY-6683	sulfate reduction III (assimilatory)
BVAF_164	PWY-6932	selenate reduction
BVAF_165	PWY-5340	sulfate activation for sulfonation
BVAF_167	PWY-7560	methylerythritol phosphate pathway II
BVAF_168	PWY-7560	methylerythritol phosphate pathway II
BVAF_176	PWY-6829	tRNA methylation (yeast)
BVAF_176	PWY-7285	methylwyosine biosynthesis
BVAF_176	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
BVAF_178	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BVAF_178	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BVAF_178	PWY-6164	3-dehydroquinate biosynthesis I
BVAF_179	PWY-3461	L-tyrosine biosynthesis II
BVAF_179	PWY-3462	L-phenylalanine biosynthesis II
BVAF_179	PWY-6120	L-tyrosine biosynthesis III
BVAF_179	PWY-6627	salinosporamide A biosynthesis
BVAF_179	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
BVAF_180	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
BVAF_184	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BVAF_184	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BVAF_185	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BVAF_185	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BVAF_222	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BVAF_224	PWY-5386	methylglyoxal degradation I
BVAF_231	PWY-6700	queuosine biosynthesis
BVAF_236	PWY-6167	flavin biosynthesis II (archaea)
BVAF_236	PWY-6168	flavin biosynthesis III (fungi)
BVAF_238	PWY-5269	cardiolipin biosynthesis II
BVAF_238	PWY-5668	cardiolipin biosynthesis I
BVAF_239	PWY-6891	thiazole biosynthesis II (Bacillus)
BVAF_239	PWY-6892	thiazole biosynthesis I (E. coli)
BVAF_239	PWY-7560	methylerythritol phosphate pathway II
BVAF_245	PWY-3781	aerobic respiration I (cytochrome c)
BVAF_245	PWY-4521	arsenite oxidation I (respiratory)
BVAF_245	PWY-6692	Fe(II) oxidation
BVAF_245	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BVAF_245	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
BVAF_251	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BVAF_254	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BVAF_254	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
BVAF_255	PWY-40	putrescine biosynthesis I
BVAF_255	PWY-6305	putrescine biosynthesis IV
BVAF_256	PWY-1042	glycolysis IV (plant cytosol)
BVAF_256	PWY-5484	glycolysis II (from fructose 6-phosphate)
BVAF_256	PWY-6886	1-butanol autotrophic biosynthesis
BVAF_256	PWY-6901	superpathway of glucose and xylose degradation
BVAF_256	PWY-7003	glycerol degradation to butanol
BVAF_257	PWY-1042	glycolysis IV (plant cytosol)
BVAF_257	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BVAF_257	PWY-5484	glycolysis II (from fructose 6-phosphate)
BVAF_257	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BVAF_257	PWY-7385	1,3-propanediol biosynthesis (engineered)
BVAF_258	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BVAF_258	PWY-5723	Rubisco shunt
BVAF_266	PWY-2941	L-lysine biosynthesis II
BVAF_266	PWY-2942	L-lysine biosynthesis III
BVAF_266	PWY-5097	L-lysine biosynthesis VI
BVAF_278	PWY-7560	methylerythritol phosphate pathway II
BVAF_285	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BVAF_285	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BVAF_285	PWY-5989	stearate biosynthesis II (bacteria and plants)
BVAF_285	PWY-5994	palmitate biosynthesis I (animals and fungi)
BVAF_285	PWY-6113	superpathway of mycolate biosynthesis
BVAF_285	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BVAF_285	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BVAF_285	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BVAF_285	PWYG-321	mycolate biosynthesis
BVAF_290	PWY-4381	fatty acid biosynthesis initiation I
BVAF_290	PWY-5743	3-hydroxypropanoate cycle
BVAF_290	PWY-5744	glyoxylate assimilation
BVAF_290	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BVAF_290	PWY-6679	jadomycin biosynthesis
BVAF_290	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BVAF_296	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BVAF_296	PWY-6416	quinate degradation II
BVAF_296	PWY-6707	gallate biosynthesis
BVAF_303	PWY-6605	adenine and adenosine salvage II
BVAF_303	PWY-6610	adenine and adenosine salvage IV
BVAF_305	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_308	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
BVAF_308	PWY-2201	folate transformations I
BVAF_308	PWY-3841	folate transformations II
BVAF_308	PWY-5030	L-histidine degradation III
BVAF_308	PWY-5497	purine nucleobases degradation II (anaerobic)
BVAF_308	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BVAF_325	PWY-6906	chitin derivatives degradation
BVAF_325	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
BVAF_325	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
BVAF_326	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BVAF_326	PWY-6855	chitin degradation I (archaea)
BVAF_326	PWY-6906	chitin derivatives degradation
BVAF_327	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BVAF_331	PWY-3781	aerobic respiration I (cytochrome c)
BVAF_331	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BVAF_331	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BVAF_331	PWY-5690	TCA cycle II (plants and fungi)
BVAF_331	PWY-6728	methylaspartate cycle
BVAF_331	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BVAF_331	PWY-7254	TCA cycle VII (acetate-producers)
BVAF_331	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BVAF_332	PWY-3781	aerobic respiration I (cytochrome c)
BVAF_332	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BVAF_332	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BVAF_332	PWY-5690	TCA cycle II (plants and fungi)
BVAF_332	PWY-6728	methylaspartate cycle
BVAF_332	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BVAF_332	PWY-7254	TCA cycle VII (acetate-producers)
BVAF_332	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BVAF_333	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BVAF_334	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BVAF_335	PWY-5392	reductive TCA cycle II
BVAF_335	PWY-5537	pyruvate fermentation to acetate V
BVAF_335	PWY-5538	pyruvate fermentation to acetate VI
BVAF_335	PWY-5690	TCA cycle II (plants and fungi)
BVAF_335	PWY-5913	TCA cycle VI (obligate autotrophs)
BVAF_335	PWY-6728	methylaspartate cycle
BVAF_335	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BVAF_335	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BVAF_336	PWY-5392	reductive TCA cycle II
BVAF_336	PWY-5537	pyruvate fermentation to acetate V
BVAF_336	PWY-5538	pyruvate fermentation to acetate VI
BVAF_336	PWY-5690	TCA cycle II (plants and fungi)
BVAF_336	PWY-5913	TCA cycle VI (obligate autotrophs)
BVAF_336	PWY-6728	methylaspartate cycle
BVAF_336	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BVAF_336	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BVAF_344	PWY-1622	formaldehyde assimilation I (serine pathway)
BVAF_344	PWY-5484	glycolysis II (from fructose 6-phosphate)
BVAF_349	PWY-7560	methylerythritol phosphate pathway II
BVAF_353	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BVAF_353	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BVAF_360	PWY-6984	lipoate salvage II
BVAF_360	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BVAF_360	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
BVAF_365	PWY-6823	molybdenum cofactor biosynthesis
BVAF_365	PWY-6891	thiazole biosynthesis II (Bacillus)
BVAF_365	PWY-6892	thiazole biosynthesis I (E. coli)
BVAF_365	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BVAF_369	PWY-6167	flavin biosynthesis II (archaea)
BVAF_369	PWY-6168	flavin biosynthesis III (fungi)
BVAF_369	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_373	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BVAF_373	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BVAF_376	PWY-5392	reductive TCA cycle II
BVAF_376	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BVAF_376	PWY-5690	TCA cycle II (plants and fungi)
BVAF_376	PWY-5913	TCA cycle VI (obligate autotrophs)
BVAF_376	PWY-6728	methylaspartate cycle
BVAF_376	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BVAF_376	PWY-7254	TCA cycle VII (acetate-producers)
BVAF_376	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BVAF_379	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BVAF_379	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
BVAF_384	PWY-7205	CMP phosphorylation
BVAF_385	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BVAF_387	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
BVAF_396	PWY-6123	inosine-5'-phosphate biosynthesis I
BVAF_396	PWY-6124	inosine-5'-phosphate biosynthesis II
BVAF_396	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_396	PWY-7234	inosine-5'-phosphate biosynthesis III
BVAF_404	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BVAF_404	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BVAF_404	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_404	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BVAF_404	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BVAF_404	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BVAF_405	PWY-6543	4-aminobenzoate biosynthesis
BVAF_405	PWY-6722	candicidin biosynthesis
BVAF_407	PWY-5367	petroselinate biosynthesis
BVAF_407	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BVAF_407	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BVAF_407	PWY-5989	stearate biosynthesis II (bacteria and plants)
BVAF_407	PWY-5994	palmitate biosynthesis I (animals and fungi)
BVAF_407	PWY-6113	superpathway of mycolate biosynthesis
BVAF_407	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BVAF_407	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BVAF_407	PWY-6951	BVAF_407|fabG|YP_004124474.1|GeneID:10101796
BVAF_407	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
BVAF_407	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BVAF_407	PWYG-321	mycolate biosynthesis
BVAF_408	PWY-4381	fatty acid biosynthesis initiation I
BVAF_408	PWY-6799	fatty acid biosynthesis (plant mitochondria)
BVAF_408	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BVAF_409	PWY-4381	fatty acid biosynthesis initiation I
BVAF_416	PWY-5269	cardiolipin biosynthesis II
BVAF_416	PWY-5668	cardiolipin biosynthesis I
BVAF_421	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BVAF_421	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BVAF_421	PWY-5989	stearate biosynthesis II (bacteria and plants)
BVAF_421	PWY-5994	palmitate biosynthesis I (animals and fungi)
BVAF_421	PWY-6113	superpathway of mycolate biosynthesis
BVAF_421	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BVAF_421	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BVAF_421	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BVAF_421	PWYG-321	mycolate biosynthesis
BVAF_423	PWY-5913	TCA cycle VI (obligate autotrophs)
BVAF_423	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
BVAF_423	PWY-6638	sulfolactate degradation III
BVAF_423	PWY-6642	(<i>R</i>)-cysteate degradation
BVAF_423	PWY-6643	coenzyme M biosynthesis II
BVAF_423	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BVAF_423	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BVAF_423	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BVAF_425	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BVAF_425	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BVAF_425	PWY-5989	stearate biosynthesis II (bacteria and plants)
BVAF_425	PWY-6113	superpathway of mycolate biosynthesis
BVAF_425	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BVAF_425	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BVAF_425	PWY-7096	triclosan resistance
BVAF_425	PWYG-321	mycolate biosynthesis
BVAF_426	PWY-6168	flavin biosynthesis III (fungi)
BVAF_426	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BVAF_427	PWY-5958	acridone alkaloid biosynthesis
BVAF_427	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BVAF_427	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BVAF_428	PWY-5958	acridone alkaloid biosynthesis
BVAF_428	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BVAF_428	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BVAF_435	PWY-7199	pyrimidine deoxyribonucleosides salvage
BVAF_438	PWY-1042	glycolysis IV (plant cytosol)
BVAF_438	PWY-5484	glycolysis II (from fructose 6-phosphate)
BVAF_438	PWY-6901	superpathway of glucose and xylose degradation
BVAF_438	PWY-7003	glycerol degradation to butanol
BVAF_444	PWY-5958	acridone alkaloid biosynthesis
BVAF_444	PWY-6543	4-aminobenzoate biosynthesis
BVAF_444	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BVAF_444	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BVAF_444	PWY-6722	candicidin biosynthesis
BVAF_446	PWY-7310	D-glucosaminate degradation
BVAF_450	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BVAF_451	PWY-1042	glycolysis IV (plant cytosol)
BVAF_451	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BVAF_451	PWY-5484	glycolysis II (from fructose 6-phosphate)
BVAF_451	PWY-5723	Rubisco shunt
BVAF_451	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BVAF_451	PWY-6886	1-butanol autotrophic biosynthesis
BVAF_451	PWY-6901	superpathway of glucose and xylose degradation
BVAF_451	PWY-7003	glycerol degradation to butanol
BVAF_451	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BVAF_451	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BVAF_473	PWY-5663	tetrahydrobiopterin biosynthesis I
BVAF_473	PWY-5664	tetrahydrobiopterin biosynthesis II
BVAF_473	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BVAF_473	PWY-6703	preQ<sub>0</sub> biosynthesis
BVAF_473	PWY-6983	tetrahydrobiopterin biosynthesis III
BVAF_473	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BVAF_475	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BVAF_475	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BVAF_478	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
BVAF_478	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
BVAF_478	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
BVAF_478	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
BVAF_478	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
BVAF_478	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
BVAF_478	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
BVAF_478	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
BVAF_478	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
BVAF_478	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
BVAF_479	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BVAF_479	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BVAF_479	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BVAF_479	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BVAF_479	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_479	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_479	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BVAF_479	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BVAF_480	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BVAF_480	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BVAF_480	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BVAF_480	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BVAF_480	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_480	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_480	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BVAF_480	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BVAF_495	PWY-2161	folate polyglutamylation
BVAF_496	PWY-4381	fatty acid biosynthesis initiation I
BVAF_496	PWY-5743	3-hydroxypropanoate cycle
BVAF_496	PWY-5744	glyoxylate assimilation
BVAF_496	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BVAF_496	PWY-6679	jadomycin biosynthesis
BVAF_496	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BVAF_501	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BVAF_504	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BVAF_508	PWY-6936	seleno-amino acid biosynthesis
BVAF_515	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BVAF_515	PWY-5723	Rubisco shunt
BVAF_516	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BVAF_516	PWY-5723	Rubisco shunt
BVAF_516	PWY-6891	thiazole biosynthesis II (Bacillus)
BVAF_516	PWY-6892	thiazole biosynthesis I (E. coli)
BVAF_516	PWY-6901	superpathway of glucose and xylose degradation
BVAF_516	PWY-7560	methylerythritol phosphate pathway II
BVAF_518	PWY-2941	L-lysine biosynthesis II
BVAF_518	PWY-2942	L-lysine biosynthesis III
BVAF_518	PWY-5097	L-lysine biosynthesis VI
BVAF_520	PWY-7183	pyrimidine nucleobases salvage I
BVAF_524	PWY-5704	urea degradation II
BVAF_525	PWY-5704	urea degradation II
BVAF_526	PWY-5704	urea degradation II
BVAF_528	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_529	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BVAF_529	PWY-6596	adenosine nucleotides degradation I
BVAF_529	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_530	PWY-7254	TCA cycle VII (acetate-producers)
BVAF_533	PWY-7560	methylerythritol phosphate pathway II
BVAF_535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BVAF_535	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BVAF_535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BVAF_535	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_535	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BVAF_535	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BVAF_535	PWY-7205	CMP phosphorylation
BVAF_535	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BVAF_535	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_535	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_535	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_535	PWY-7224	purine deoxyribonucleosides salvage
BVAF_535	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BVAF_535	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BVAF_536	PWY-6823	molybdenum cofactor biosynthesis
BVAF_536	PWY-6891	thiazole biosynthesis II (Bacillus)
BVAF_536	PWY-6892	thiazole biosynthesis I (E. coli)
BVAF_536	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BVAF_538	PWY-1622	formaldehyde assimilation I (serine pathway)
BVAF_538	PWY-181	photorespiration
BVAF_538	PWY-2161	folate polyglutamylation
BVAF_538	PWY-2201	folate transformations I
BVAF_538	PWY-3661	glycine betaine degradation I
BVAF_538	PWY-3661-1	glycine betaine degradation II (mammalian)
BVAF_538	PWY-3841	folate transformations II
BVAF_538	PWY-5497	purine nucleobases degradation II (anaerobic)
BVAF_540	PWY-6012	acyl carrier protein metabolism I
BVAF_540	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BVAF_547	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BVAF_547	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BVAF_547	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BVAF_553	PWY-5269	cardiolipin biosynthesis II
BVAF_553	PWY-5668	cardiolipin biosynthesis I
BVAF_557	PWY-6123	inosine-5'-phosphate biosynthesis I
BVAF_557	PWY-6124	inosine-5'-phosphate biosynthesis II
BVAF_557	PWY-7234	inosine-5'-phosphate biosynthesis III
BVAF_570	PWY-5958	acridone alkaloid biosynthesis
BVAF_570	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BVAF_570	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BVAF_572	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BVAF_572	PWY-5723	Rubisco shunt
BVAF_573	PWY-6164	3-dehydroquinate biosynthesis I
BVAF_574	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BVAF_576	PWY-2941	L-lysine biosynthesis II
BVAF_576	PWY-2942	L-lysine biosynthesis III
BVAF_576	PWY-5097	L-lysine biosynthesis VI
BVAF_576	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BVAF_576	PWY-6559	spermidine biosynthesis II
BVAF_576	PWY-6562	norspermidine biosynthesis
BVAF_576	PWY-7153	grixazone biosynthesis
BVAF_576	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BVAF_581	PWY-2941	L-lysine biosynthesis II
BVAF_581	PWY-5097	L-lysine biosynthesis VI
BVAF_582	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BVAF_582	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BVAF_583	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BVAF_583	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BVAF_588	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_590	PWY-5101	L-isoleucine biosynthesis II
BVAF_590	PWY-5103	L-isoleucine biosynthesis III
BVAF_590	PWY-5104	L-isoleucine biosynthesis IV
BVAF_590	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BVAF_592	PWY-5101	L-isoleucine biosynthesis II
BVAF_592	PWY-5103	L-isoleucine biosynthesis III
BVAF_592	PWY-5104	L-isoleucine biosynthesis IV
BVAF_592	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BVAF_593	PWY-5057	L-valine degradation II
BVAF_593	PWY-5076	L-leucine degradation III
BVAF_593	PWY-5078	L-isoleucine degradation II
BVAF_593	PWY-5101	L-isoleucine biosynthesis II
BVAF_593	PWY-5103	L-isoleucine biosynthesis III
BVAF_593	PWY-5104	L-isoleucine biosynthesis IV
BVAF_593	PWY-5108	L-isoleucine biosynthesis V
BVAF_595	PWY-5101	L-isoleucine biosynthesis II
BVAF_595	PWY-5103	L-isoleucine biosynthesis III
BVAF_595	PWY-5104	L-isoleucine biosynthesis IV
BVAF_595	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BVAF_595	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BVAF_595	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BVAF_595	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BVAF_599	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BVAF_599	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BVAF_600	PWY-2201	folate transformations I
BVAF_600	PWY-3841	folate transformations II
BVAF_604	PWY-1042	glycolysis IV (plant cytosol)
BVAF_604	PWY-5484	glycolysis II (from fructose 6-phosphate)
BVAF_604	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BVAF_604	PWY-7003	glycerol degradation to butanol
BVAF_605	PWY-1042	glycolysis IV (plant cytosol)
BVAF_605	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BVAF_605	PWY-5484	glycolysis II (from fructose 6-phosphate)
BVAF_605	PWY-7385	1,3-propanediol biosynthesis (engineered)
BVAF_606	PWY-6936	seleno-amino acid biosynthesis
BVAF_606	PWY-7274	D-cycloserine biosynthesis
BVAF_607	PWY-5667	CDP-diacylglycerol biosynthesis I
BVAF_607	PWY-5981	CDP-diacylglycerol biosynthesis III
BVAF_615	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BVAF_615	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BVAF_615	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BVAF_615	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
BVAF_618	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BVAF_624	PWY-5839	menaquinol-7 biosynthesis
BVAF_624	PWY-5844	menaquinol-9 biosynthesis
BVAF_624	PWY-5849	menaquinol-6 biosynthesis
BVAF_624	PWY-5890	menaquinol-10 biosynthesis
BVAF_624	PWY-5891	menaquinol-11 biosynthesis
BVAF_624	PWY-5892	menaquinol-12 biosynthesis
BVAF_624	PWY-5895	menaquinol-13 biosynthesis
BVAF_626	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BVAF_626	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BVAF_626	PWY-6936	seleno-amino acid biosynthesis
BVAF_626	PWY-702	L-methionine biosynthesis II
BVAF_629	PWY-3801	sucrose degradation II (sucrose synthase)
BVAF_629	PWY-5054	sorbitol biosynthesis I
BVAF_629	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
BVAF_629	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BVAF_629	PWY-5659	GDP-mannose biosynthesis
BVAF_629	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BVAF_629	PWY-621	sucrose degradation III (sucrose invertase)
BVAF_629	PWY-622	starch biosynthesis
BVAF_629	PWY-6531	mannitol cycle
BVAF_629	PWY-6981	chitin biosynthesis
BVAF_629	PWY-7238	sucrose biosynthesis II
BVAF_629	PWY-7347	sucrose biosynthesis III
BVAF_629	PWY-7385	1,3-propanediol biosynthesis (engineered)
