PAQ_001	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
PAQ_001	SSF53067	Actin-like ATPase domain
PAQ_002	SSF46565	Chaperone J-domain
PAQ_002	SSF49493	HSP40/DnaJ peptide-binding domain
PAQ_002	SSF57938	DnaJ/Hsp40 cysteine-rich domain
PAQ_008	SSF54862	4Fe-4S ferredoxins
PAQ_010	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
PAQ_010	SSF54292	2Fe-2S ferredoxin-like
PAQ_010	SSF54862	4Fe-4S ferredoxins
PAQ_011	SSF140490	Nqo1C-terminal domain-like
PAQ_011	SSF142019	Nqo1 FMN-binding domain-like
PAQ_011	SSF142984	Nqo1 middle domain-like
PAQ_012	SSF52833	Thioredoxin-like
PAQ_013	SSF143243	Nqo5-like
PAQ_013	SSF56762	HydB/Nqo4-like
PAQ_014	SSF56770	HydA/Nqo6-like
PAQ_016	SSF54211	Ribosomal protein S5 domain 2-like
PAQ_018	SSF54211	Ribosomal protein S5 domain 2-like
PAQ_018	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
PAQ_018	SSF56719	Type II DNA topoisomerase
PAQ_021	SSF55681	Class II aaRS and biotin synthetases
PAQ_022	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAQ_022	SSF55021	ACT-like
PAQ_023	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
PAQ_023	SSF63380	Riboflavin synthase domain-like
PAQ_025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_026	SSF51905	FAD/NAD(P)-binding domain
PAQ_028	SSF81336	F1F0 ATP synthase subunit A
PAQ_029	SSF81333	F1F0 ATP synthase subunit C
PAQ_032	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PAQ_032	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
PAQ_032	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_033	SSF52943	ATP synthase (F1-ATPase), gamma subunit
PAQ_034	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
PAQ_034	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
PAQ_034	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_035	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
PAQ_036	SSF53671	Aspartate/ornithine carbamoyltransferase
PAQ_037	SSF52016	LeuD/IlvD-like
PAQ_038	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
PAQ_039	SSF51735	NAD(P)-binding Rossmann-fold domains
PAQ_039	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAQ_040	SSF55120	Pseudouridine synthase
PAQ_041	SSF51366	Ribulose-phoshate binding barrel
PAQ_043	SSF46589	tRNA-binding arm
PAQ_043	SSF55681	Class II aaRS and biotin synthetases
PAQ_045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_046	SSF52954	Class II aaRS ABD-related
PAQ_046	SSF55681	Class II aaRS and biotin synthetases
PAQ_047	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_047	SSF54211	Ribosomal protein S5 domain 2-like
PAQ_047	SSF88697	PUA domain-like
PAQ_048	SSF143975	IlvD/EDD N-terminal domain-like
PAQ_048	SSF52016	LeuD/IlvD-like
PAQ_050	SSF55681	Class II aaRS and biotin synthetases
PAQ_051	SSF101960	Stabilizer of iron transporter SufD
PAQ_052	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_053	SSF101960	Stabilizer of iron transporter SufD
PAQ_054	SSF53383	PLP-dependent transferases
PAQ_055	SSF52402	Adenine nucleotide alpha hydrolases-like
PAQ_056	SSF50249	Nucleic acid-binding proteins
PAQ_059	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_062	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAQ_062	SSF51735	NAD(P)-binding Rossmann-fold domains
PAQ_067	SSF50104	Translation proteins SH3-like domain
PAQ_067	SSF82679	N-utilization substance G protein NusG, N-terminal domain
PAQ_068	SSF46906	Ribosomal protein L11, C-terminal domain
PAQ_068	SSF54747	Ribosomal L11/L12e N-terminal domain
PAQ_069	SSF56808	Ribosomal protein L1
PAQ_070	SSF160369	Ribosomal protein L10-like
PAQ_071	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
PAQ_071	SSF54736	ClpS-like
PAQ_072	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
PAQ_073	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
PAQ_074	SSF50249	Nucleic acid-binding proteins
PAQ_075	SSF47973	Ribosomal protein S7
PAQ_076	SSF50447	Translation proteins
PAQ_076	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_076	SSF54211	Ribosomal protein S5 domain 2-like
PAQ_076	SSF54980	EF-G C-terminal domain-like
PAQ_077	SSF50447	Translation proteins
PAQ_077	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
PAQ_077	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_078	SSF54999	Ribosomal protein S10
PAQ_079	SSF50447	Translation proteins
PAQ_080	SSF52166	Ribosomal protein L4
PAQ_081	SSF54189	Ribosomal proteins S24e, L23 and L15e
PAQ_082	SSF50104	Translation proteins SH3-like domain
PAQ_082	SSF50249	Nucleic acid-binding proteins
PAQ_083	SSF54570	Ribosomal protein S19
PAQ_084	SSF54843	Ribosomal protein L22
PAQ_085	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PAQ_085	SSF54821	Ribosomal protein S3 C-terminal domain
PAQ_086	SSF54686	Ribosomal protein L16p/L10e
PAQ_087	SSF46561	Ribosomal protein L29 (L29p)
PAQ_088	SSF50249	Nucleic acid-binding proteins
PAQ_089	SSF50193	Ribosomal protein L14
PAQ_090	SSF50104	Translation proteins SH3-like domain
PAQ_091	SSF55282	RL5-like
PAQ_092	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
PAQ_093	SSF56047	Ribosomal protein S8
PAQ_094	SSF56053	Ribosomal protein L6
PAQ_095	SSF53137	Translational machinery components
PAQ_096	SSF54211	Ribosomal protein S5 domain 2-like
PAQ_096	SSF54768	dsRNA-binding domain-like
PAQ_097	SSF52080	Ribosomal proteins L15p and L18e
PAQ_098	SSF103491	Preprotein translocase SecY subunit
PAQ_099	SSF57840	Ribosomal protein L36
PAQ_100	SSF46946	S13-like H2TH domain
PAQ_101	SSF53137	Translational machinery components
PAQ_102	SSF55174	Alpha-L RNA-binding motif
PAQ_103	SSF47789	C-terminal domain of RNA polymerase alpha subunit
PAQ_103	SSF55257	RBP11-like subunits of RNA polymerase
PAQ_103	SSF56553	Insert subdomain of RNA polymerase alpha subunit
PAQ_104	SSF64263	Prokaryotic ribosomal protein L17
PAQ_105	SSF141091	L21p-like
PAQ_106	SSF110324	Ribosomal L27 protein-like
PAQ_107	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_107	SSF82051	Obg GTP-binding protein N-terminal domain
PAQ_108	SSF46992	Ribosomal protein S20
PAQ_109	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAQ_109	SSF50677	ValRS/IleRS/LeuRS editing domain
PAQ_109	SSF52374	Nucleotidylyl transferase
PAQ_110	SSF75620	Release factor
PAQ_111	SSF50249	Nucleic acid-binding proteins
PAQ_111	SSF55681	Class II aaRS and biotin synthetases
PAQ_112	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAQ_113	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAQ_113	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAQ_114	SSF143800	L28p-like
PAQ_115	SSF57829	Zn-binding ribosomal proteins
PAQ_121	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
PAQ_121	SSF52374	Nucleotidylyl transferase
PAQ_122	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAQ_123	SSF52777	CoA-dependent acyltransferases
PAQ_124	SSF51905	FAD/NAD(P)-binding domain
PAQ_124	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
PAQ_126	SSF54995	Ribosomal protein S6
PAQ_127	SSF46911	Ribosomal protein S18
PAQ_128	SSF55653	Ribosomal protein L9 C-domain
PAQ_128	SSF55658	L9 N-domain-like
PAQ_129	SSF48024	N-terminal domain of DnaB helicase
PAQ_129	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_130	SSF53067	Actin-like ATPase domain
PAQ_132	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
PAQ_132	SSF88946	Sigma2 domain of RNA polymerase sigma factors
PAQ_133	SSF49503	Cupredoxins
PAQ_133	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
PAQ_134	SSF81442	Cytochrome c oxidase subunit I-like
PAQ_135	SSF81452	Cytochrome c oxidase subunit III-like
PAQ_139	SSF47060	S15/NS1 RNA-binding domain
PAQ_140	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
PAQ_140	SSF50249	Nucleic acid-binding proteins
PAQ_140	SSF54211	Ribosomal protein S5 domain 2-like
PAQ_140	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
PAQ_140	SSF55666	Ribonuclease PH domain 2-like
PAQ_142	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
PAQ_143	SSF117916	Fe-S cluster assembly (FSCA) domain-like
PAQ_143	SSF89360	HesB-like domain
PAQ_144	SSF82649	SufE/NifU
PAQ_145	SSF141734	HisI-like
PAQ_149	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
PAQ_149	SSF51230	Single hybrid motif
PAQ_149	SSF52777	CoA-dependent acyltransferases
PAQ_150	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAQ_150	SSF52922	TK C-terminal domain-like
PAQ_151	SSF51569	Aldolase
PAQ_152	SSF50249	Nucleic acid-binding proteins
PAQ_153	SSF55205	EPT/RTPC-like
PAQ_154	SSF48600	Chorismate mutase II
PAQ_154	SSF53850	Periplasmic binding protein-like II
PAQ_154	SSF55021	ACT-like
PAQ_155	SSF101904	GyrA/ParC C-terminal domain-like
PAQ_155	SSF56719	Type II DNA topoisomerase
PAQ_156	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_156	SSF81767	Pre-protein crosslinking domain of SecA
PAQ_156	SSF81886	Helical scaffold and wing domains of SecA
PAQ_158	SSF53732	Aconitase iron-sulfur domain
PAQ_159	SSF103263	Chorismate synthase, AroC
PAQ_160	SSF50249	Nucleic acid-binding proteins
PAQ_161	SSF51569	Aldolase
PAQ_161	SSF89000	post-HMGL domain-like
PAQ_162	SSF47336	ACP-like
PAQ_163	SSF57829	Zn-binding ribosomal proteins
PAQ_164	SSF55120	Pseudouridine synthase
PAQ_164	SSF55174	Alpha-L RNA-binding motif
PAQ_165	SSF50249	Nucleic acid-binding proteins
PAQ_166	SSF103473	MFS general substrate transporter
PAQ_167	SSF56796	Dehydroquinate synthase-like
PAQ_168	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_169	SSF143800	L28p-like
PAQ_170	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
PAQ_171	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_172	SSF101386	all-alpha NTP pyrophosphatases
PAQ_173	SSF51726	UROD/MetE-like
PAQ_174	SSF51569	Aldolase
PAQ_175	SSF50249	Nucleic acid-binding proteins
PAQ_175	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_175	SSF68912	Rho N-terminal domain-like
PAQ_176	SSF52402	Adenine nucleotide alpha hydrolases-like
PAQ_176	SSF56037	PheT/TilS domain
PAQ_176	SSF82829	MesJ substrate recognition domain-like
PAQ_177	SSF89550	PHP domain-like
PAQ_178	SSF46934	UBA-like
PAQ_178	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
PAQ_179	SSF52313	Ribosomal protein S2
PAQ_180	SSF55920	Creatinase/aminopeptidase
PAQ_181	SSF51161	Trimeric LpxA-like enzymes
PAQ_182	SSF53187	Zn-dependent exopeptidases
PAQ_182	SSF55031	Bacterial exopeptidase dimerisation domain
PAQ_184	SSF52374	Nucleotidylyl transferase
PAQ_184	SSF55174	Alpha-L RNA-binding motif
PAQ_187	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
PAQ_187	SSF52317	Class I glutamine amidotransferase-like
PAQ_188	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
PAQ_188	SSF52335	Methylglyoxal synthase-like
PAQ_188	SSF52440	PreATP-grasp domain
PAQ_188	SSF56059	Glutathione synthetase ATP-binding domain-like
PAQ_189	SSF46557	GreA transcript cleavage protein, N-terminal domain
PAQ_189	SSF54534	FKBP-like
PAQ_190	SSF140990	FtsH protease domain-like
PAQ_190	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_193	SSF50249	Nucleic acid-binding proteins
PAQ_193	SSF54814	Prokaryotic type KH domain (KH-domain type II)
PAQ_193	SSF69705	Transcription factor NusA, N-terminal domain
PAQ_194	SSF46955	Putative DNA-binding domain
PAQ_194	SSF50447	Translation proteins
PAQ_194	SSF52156	Initiation factor IF2/eIF5b, domain 3
PAQ_194	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_195	SSF89919	Ribosome-binding factor A, RbfA
PAQ_196	SSF46955	Putative DNA-binding domain
PAQ_196	SSF50249	Nucleic acid-binding proteins
PAQ_196	SSF54991	Anticodon-binding domain of PheRS
PAQ_196	SSF55681	Class II aaRS and biotin synthetases
PAQ_196	SSF56037	PheT/TilS domain
PAQ_197	SSF46589	tRNA-binding arm
PAQ_197	SSF55681	Class II aaRS and biotin synthetases
PAQ_198	SSF74731	Ribosomal protein L20
PAQ_199	SSF143034	L35p-like
PAQ_200	SSF54364	Translation initiation factor IF3, N-terminal domain
PAQ_200	SSF55200	Translation initiation factor IF3, C-terminal domain
PAQ_202	SSF52954	Class II aaRS ABD-related
PAQ_202	SSF55681	Class II aaRS and biotin synthetases
PAQ_202	SSF55826	YbaK/ProRS associated domain
PAQ_203	SSF52304	Type II 3-dehydroquinate dehydratase
PAQ_204	SSF118215	Proton glutamate symport protein
PAQ_205	SSF51730	FAD-linked oxidoreductase
PAQ_207	SSF51735	NAD(P)-binding Rossmann-fold domains
PAQ_207	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAQ_208	SSF53067	Actin-like ATPase domain
PAQ_209	SSF56420	Peptide deformylase
PAQ_210	SSF51735	NAD(P)-binding Rossmann-fold domains
PAQ_210	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
PAQ_211	SSF50715	Ribosomal protein L25-like
PAQ_211	SSF52374	Nucleotidylyl transferase
PAQ_212	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAQ_212	SSF52374	Nucleotidylyl transferase
PAQ_219	SSF56024	Phospholipase D/nuclease
PAQ_220	SSF158791	MgtE N-terminal domain-like
PAQ_220	SSF161093	MgtE membrane domain-like
PAQ_220	SSF54631	CBS-domain pair
PAQ_221	SSF50249	Nucleic acid-binding proteins
PAQ_221	SSF55261	GAD domain-like
PAQ_221	SSF55681	Class II aaRS and biotin synthetases
PAQ_222	SSF103088	OmpA-like
PAQ_225	SSF102114	Radical SAM enzymes
PAQ_227	SSF53633	Carbamate kinase-like
PAQ_227	SSF55021	ACT-like
PAQ_228	SSF55186	ThrRS/AlaRS common domain
PAQ_229	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAQ_229	SSF50677	ValRS/IleRS/LeuRS editing domain
PAQ_229	SSF52374	Nucleotidylyl transferase
PAQ_230	SSF55486	Metalloproteases ("zincins"), catalytic domain
PAQ_231	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAQ_232	SSF51366	Ribulose-phoshate binding barrel
PAQ_233	SSF54862	4Fe-4S ferredoxins
PAQ_234	SSF52833	Thioredoxin-like
PAQ_235	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
PAQ_235	SSF50677	ValRS/IleRS/LeuRS editing domain
PAQ_235	SSF52374	Nucleotidylyl transferase
PAQ_236	SSF53383	PLP-dependent transferases
PAQ_237	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_237	SSF54980	EF-G C-terminal domain-like
PAQ_238	SSF48592	GroEL equatorial domain-like
PAQ_238	SSF52029	GroEL apical domain-like
PAQ_238	SSF54849	GroEL-intermediate domain like
PAQ_239	SSF50129	GroES-like
PAQ_240	SSF52402	Adenine nucleotide alpha hydrolases-like
PAQ_240	SSF69864	Argininosuccinate synthetase, C-terminal domain
PAQ_241	SSF52833	Thioredoxin-like
PAQ_244	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_247	SSF56322	ADC synthase
PAQ_248	SSF52317	Class I glutamine amidotransferase-like
PAQ_249	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
PAQ_249	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
PAQ_250	SSF51366	Ribulose-phoshate binding barrel
PAQ_253	SSF50715	Ribosomal protein L25-like
PAQ_254	SSF53271	PRTase-like
PAQ_255	SSF75620	Release factor
PAQ_256	SSF51905	FAD/NAD(P)-binding domain
PAQ_257	SSF48576	Terpenoid synthases
PAQ_258	SSF51905	FAD/NAD(P)-binding domain
PAQ_259	SSF55931	Glutamine synthetase/guanido kinase
PAQ_259	SSF89095	GatB/YqeY motif
PAQ_260	SSF75304	Amidase signature (AS) enzymes
PAQ_262	SSF53850	Periplasmic binding protein-like II
PAQ_263	SSF52161	Ribosomal protein L13
PAQ_264	SSF54211	Ribosomal protein S5 domain 2-like
PAQ_266	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
PAQ_266	SSF81799	Putative methyltransferase TM0872, insert domain
PAQ_267	SSF48334	DNA repair protein MutS, domain III
PAQ_267	SSF52540	P-loop containing nucleoside triphosphate hydrolases
PAQ_267	SSF53150	DNA repair protein MutS, domain II
PAQ_267	SSF55271	DNA repair protein MutS, domain I
PAQ_271	SSF56112	Protein kinase-like (PK-like)
PAQ_272	SSF53383	PLP-dependent transferases
PAQ_273	SSF51366	Ribulose-phoshate binding barrel
PAQ_274	SSF51366	Ribulose-phoshate binding barrel
PAQ_275	SSF52317	Class I glutamine amidotransferase-like
PAQ_276	SSF54211	Ribosomal protein S5 domain 2-like
PAQ_281	SSF55120	Pseudouridine synthase
PAQ_283	SSF52467	DHS-like NAD/FAD-binding domain
PAQ_283	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
PAQ_284	SSF55021	ACT-like
PAQ_285	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
PAQ_285	SSF51735	NAD(P)-binding Rossmann-fold domains
PAQ_286	SSF54565	Ribosomal protein S16
PAQ_287	SSF50447	Translation proteins
PAQ_288	SSF50104	Translation proteins SH3-like domain
PAQ_289	SSF51735	NAD(P)-binding Rossmann-fold domains
PAQ_289	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
PAQ_290	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
PAQ_291	SSF74982	Small protein B (SmpB)
PAQ_292	SSF51064	Head domain of nucleotide exchange factor GrpE
PAQ_292	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE