Rmag_0004	PWY-5723	Rubisco shunt
Rmag_0007	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Rmag_0011	PWY-3781	aerobic respiration I (cytochrome c)
Rmag_0011	PWY-6692	Fe(II) oxidation
Rmag_0011	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Rmag_0011	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Rmag_0015	PWY-5686	UMP biosynthesis
Rmag_0016	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Rmag_0016	PWY-6167	flavin biosynthesis II (archaea)
Rmag_0016	PWY-6168	flavin biosynthesis III (fungi)
Rmag_0023	PWY-6123	inosine-5'-phosphate biosynthesis I
Rmag_0023	PWY-6124	inosine-5'-phosphate biosynthesis II
Rmag_0023	PWY-7234	inosine-5'-phosphate biosynthesis III
Rmag_0025	PWY-7560	methylerythritol phosphate pathway II
Rmag_0035	PWY-3781	aerobic respiration I (cytochrome c)
Rmag_0035	PWY-4521	arsenite oxidation I (respiratory)
Rmag_0035	PWY-6692	Fe(II) oxidation
Rmag_0035	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Rmag_0039	PWY-3781	aerobic respiration I (cytochrome c)
Rmag_0039	PWY-4521	arsenite oxidation I (respiratory)
Rmag_0039	PWY-6692	Fe(II) oxidation
Rmag_0039	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Rmag_0040	PWY-3781	aerobic respiration I (cytochrome c)
Rmag_0040	PWY-4521	arsenite oxidation I (respiratory)
Rmag_0040	PWY-6692	Fe(II) oxidation
Rmag_0040	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Rmag_0045	PWY-5686	UMP biosynthesis
Rmag_0057	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rmag_0057	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rmag_0057	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rmag_0062	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rmag_0062	PWY-5723	Rubisco shunt
Rmag_0062	PWY-6891	thiazole biosynthesis II (Bacillus)
Rmag_0062	PWY-6892	thiazole biosynthesis I (E. coli)
Rmag_0062	PWY-6901	superpathway of glucose and xylose degradation
Rmag_0062	PWY-7560	methylerythritol phosphate pathway II
Rmag_0063	PWY-1042	glycolysis IV (plant cytosol)
Rmag_0063	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rmag_0063	PWY-6901	superpathway of glucose and xylose degradation
Rmag_0063	PWY-7003	glycerol degradation to butanol
Rmag_0065	PWY-1042	glycolysis IV (plant cytosol)
Rmag_0065	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rmag_0065	PWY-6886	1-butanol autotrophic biosynthesis
Rmag_0065	PWY-6901	superpathway of glucose and xylose degradation
Rmag_0065	PWY-7003	glycerol degradation to butanol
Rmag_0066	PWY-1042	glycolysis IV (plant cytosol)
Rmag_0066	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Rmag_0066	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rmag_0066	PWY-5723	Rubisco shunt
Rmag_0066	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rmag_0066	PWY-6886	1-butanol autotrophic biosynthesis
Rmag_0066	PWY-6901	superpathway of glucose and xylose degradation
Rmag_0066	PWY-7003	glycerol degradation to butanol
Rmag_0066	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Rmag_0066	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Rmag_0067	PWY-1042	glycolysis IV (plant cytosol)
Rmag_0067	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rmag_0067	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rmag_0067	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rmag_0067	PWY-7385	1,3-propanediol biosynthesis (engineered)
Rmag_0082	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Rmag_0082	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Rmag_0082	PWY-6897	thiamin salvage II
Rmag_0082	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Rmag_0082	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Rmag_0082	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Rmag_0082	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Rmag_0085	PWY-5278	sulfite oxidation III
Rmag_0085	PWY-5340	sulfate activation for sulfonation
Rmag_0085	PWY-6683	sulfate reduction III (assimilatory)
Rmag_0085	PWY-6932	selenate reduction
Rmag_0093	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0094	PWY-1042	glycolysis IV (plant cytosol)
Rmag_0094	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rmag_0094	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rmag_0094	PWY-6531	mannitol cycle
Rmag_0094	PWY-7385	1,3-propanediol biosynthesis (engineered)
Rmag_0099	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Rmag_0103	PWY-2941	L-lysine biosynthesis II
Rmag_0103	PWY-2942	L-lysine biosynthesis III
Rmag_0103	PWY-5097	L-lysine biosynthesis VI
Rmag_0106	PWY-5316	nicotine biosynthesis
Rmag_0106	PWY-5381	pyridine nucleotide cycling (plants)
Rmag_0106	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Rmag_0106	PWY-7342	superpathway of nicotine biosynthesis
Rmag_0110	PWY-7560	methylerythritol phosphate pathway II
Rmag_0116	PWY-3341	L-proline biosynthesis III
Rmag_0116	PWY-4981	L-proline biosynthesis II (from arginine)
Rmag_0116	PWY-6344	L-ornithine degradation II (Stickland reaction)
Rmag_0117	PWY-181	photorespiration
Rmag_0123	PWY-4381	fatty acid biosynthesis initiation I
Rmag_0123	PWY-5743	3-hydroxypropanoate cycle
Rmag_0123	PWY-5744	glyoxylate assimilation
Rmag_0123	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rmag_0123	PWY-6679	jadomycin biosynthesis
Rmag_0123	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rmag_0137	PWY-6614	tetrahydrofolate biosynthesis
Rmag_0138	PWY-6749	CMP-legionaminate biosynthesis I
Rmag_0145	PWY-5392	reductive TCA cycle II
Rmag_0145	PWY-5537	pyruvate fermentation to acetate V
Rmag_0145	PWY-5538	pyruvate fermentation to acetate VI
Rmag_0145	PWY-5690	TCA cycle II (plants and fungi)
Rmag_0145	PWY-5913	TCA cycle VI (obligate autotrophs)
Rmag_0145	PWY-6728	methylaspartate cycle
Rmag_0145	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rmag_0145	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rmag_0146	PWY-5392	reductive TCA cycle II
Rmag_0146	PWY-5537	pyruvate fermentation to acetate V
Rmag_0146	PWY-5538	pyruvate fermentation to acetate VI
Rmag_0146	PWY-5690	TCA cycle II (plants and fungi)
Rmag_0146	PWY-5913	TCA cycle VI (obligate autotrophs)
Rmag_0146	PWY-6728	methylaspartate cycle
Rmag_0146	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rmag_0146	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rmag_0151	PWY-4983	L-citrulline-nitric oxide cycle
Rmag_0151	PWY-4984	urea cycle
Rmag_0151	PWY-5	canavanine biosynthesis
Rmag_0151	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rmag_0151	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rmag_0152	PWY-5269	cardiolipin biosynthesis II
Rmag_0152	PWY-5668	cardiolipin biosynthesis I
Rmag_0153	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rmag_0153	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rmag_0211	PWY-5988	wound-induced proteolysis I
Rmag_0211	PWY-6018	seed germination protein turnover
Rmag_0218	PWY-6543	4-aminobenzoate biosynthesis
Rmag_0218	PWY-6722	candicidin biosynthesis
Rmag_0220	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rmag_0220	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rmag_0220	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0220	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Rmag_0220	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Rmag_0220	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rmag_0222	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rmag_0227	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rmag_0227	PWY-5723	Rubisco shunt
Rmag_0228	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Rmag_0232	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rmag_0232	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rmag_0234	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Rmag_0257	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Rmag_0265	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rmag_0265	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Rmag_0266	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rmag_0266	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rmag_0266	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rmag_0267	PWY-5269	cardiolipin biosynthesis II
Rmag_0267	PWY-5668	cardiolipin biosynthesis I
Rmag_0270	PWY-5194	siroheme biosynthesis
Rmag_0270	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Rmag_0275	PWY-6829	tRNA methylation (yeast)
Rmag_0275	PWY-7285	methylwyosine biosynthesis
Rmag_0275	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Rmag_0278	PWY-2941	L-lysine biosynthesis II
Rmag_0278	PWY-2942	L-lysine biosynthesis III
Rmag_0278	PWY-5097	L-lysine biosynthesis VI
Rmag_0290	PWY-4081	glutathione redox reactions I
Rmag_0304	PWY-5663	tetrahydrobiopterin biosynthesis I
Rmag_0304	PWY-5664	tetrahydrobiopterin biosynthesis II
Rmag_0304	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rmag_0304	PWY-6703	preQ<sub>0</sub> biosynthesis
Rmag_0304	PWY-6983	tetrahydrobiopterin biosynthesis III
Rmag_0304	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Rmag_0305	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Rmag_0305	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Rmag_0305	PWY-6164	3-dehydroquinate biosynthesis I
Rmag_0308	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rmag_0309	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Rmag_0309	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Rmag_0309	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Rmag_0312	PWY-6832	2-aminoethylphosphonate degradation II
Rmag_0313	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rmag_0313	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rmag_0314	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rmag_0314	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rmag_0324	PWY-4202	arsenate detoxification I (glutaredoxin)
Rmag_0324	PWY-4621	arsenate detoxification II (glutaredoxin)
Rmag_0325	PWY-2261	ascorbate glutathione cycle
Rmag_0325	PWY-4061	glutathione-mediated detoxification I
Rmag_0325	PWY-4202	arsenate detoxification I (glutaredoxin)
Rmag_0325	PWY-6370	ascorbate recycling (cytosolic)
Rmag_0325	PWY-6842	glutathione-mediated detoxification II
Rmag_0325	PWY-7112	4-hydroxy-2-nonenal detoxification
Rmag_0325	PWY-7533	gliotoxin biosynthesis
Rmag_0327	PWY-5381	pyridine nucleotide cycling (plants)
Rmag_0327	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Rmag_0337	PWY-3961	phosphopantothenate biosynthesis II
Rmag_0341	PWY-6164	3-dehydroquinate biosynthesis I
Rmag_0344	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Rmag_0349	PWY-5669	phosphatidylethanolamine biosynthesis I
Rmag_0351	PWY-1042	glycolysis IV (plant cytosol)
Rmag_0351	PWY-1622	formaldehyde assimilation I (serine pathway)
Rmag_0351	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Rmag_0351	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rmag_0351	PWY-5723	Rubisco shunt
Rmag_0351	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rmag_0351	PWY-6886	1-butanol autotrophic biosynthesis
Rmag_0351	PWY-6901	superpathway of glucose and xylose degradation
Rmag_0351	PWY-7003	glycerol degradation to butanol
Rmag_0351	PWY-7124	ethylene biosynthesis V (engineered)
Rmag_0351	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Rmag_0381	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rmag_0381	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Rmag_0381	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rmag_0381	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0381	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Rmag_0381	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Rmag_0381	PWY-7205	CMP phosphorylation
Rmag_0381	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rmag_0381	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0381	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0381	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0381	PWY-7224	purine deoxyribonucleosides salvage
Rmag_0381	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rmag_0381	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Rmag_0384	PWY-7560	methylerythritol phosphate pathway II
Rmag_0386	PWY-6891	thiazole biosynthesis II (Bacillus)
Rmag_0386	PWY-6892	thiazole biosynthesis I (E. coli)
Rmag_0386	PWY-7560	methylerythritol phosphate pathway II
Rmag_0392	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rmag_0392	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rmag_0392	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rmag_0395	PWY-5316	nicotine biosynthesis
Rmag_0395	PWY-7342	superpathway of nicotine biosynthesis
Rmag_0409	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rmag_0409	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Rmag_0410	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Rmag_0414	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rmag_0414	PWY-6148	tetrahydromethanopterin biosynthesis
Rmag_0414	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Rmag_0414	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rmag_0415	PWY-6654	phosphopantothenate biosynthesis III
Rmag_0419	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Rmag_0419	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Rmag_0419	PWY-6896	thiamin salvage I
Rmag_0419	PWY-6897	thiamin salvage II
Rmag_0423	PWY-5913	TCA cycle VI (obligate autotrophs)
Rmag_0423	PWY-6549	L-glutamine biosynthesis III
Rmag_0423	PWY-6728	methylaspartate cycle
Rmag_0423	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rmag_0423	PWY-7124	ethylene biosynthesis V (engineered)
Rmag_0423	PWY-7254	TCA cycle VII (acetate-producers)
Rmag_0423	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Rmag_0427	PWY-6703	preQ<sub>0</sub> biosynthesis
Rmag_0430	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rmag_0432	PWY-5686	UMP biosynthesis
Rmag_0434	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Rmag_0434	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rmag_0435	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rmag_0445	PWY-5101	L-isoleucine biosynthesis II
Rmag_0445	PWY-5103	L-isoleucine biosynthesis III
Rmag_0445	PWY-5104	L-isoleucine biosynthesis IV
Rmag_0445	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Rmag_0445	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Rmag_0445	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Rmag_0445	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rmag_0446	PWY-5101	L-isoleucine biosynthesis II
Rmag_0446	PWY-5103	L-isoleucine biosynthesis III
Rmag_0446	PWY-5104	L-isoleucine biosynthesis IV
Rmag_0446	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Rmag_0446	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Rmag_0446	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Rmag_0446	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rmag_0447	PWY-5101	L-isoleucine biosynthesis II
Rmag_0447	PWY-5103	L-isoleucine biosynthesis III
Rmag_0447	PWY-5104	L-isoleucine biosynthesis IV
Rmag_0447	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rmag_0448	PWY-5669	phosphatidylethanolamine biosynthesis I
Rmag_0449	PWY-6871	3-methylbutanol biosynthesis
Rmag_0452	PWY-4981	L-proline biosynthesis II (from arginine)
Rmag_0452	PWY-4984	urea cycle
Rmag_0452	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rmag_0456	PWY-6749	CMP-legionaminate biosynthesis I
Rmag_0458	PWY-6891	thiazole biosynthesis II (Bacillus)
Rmag_0458	PWY-6892	thiazole biosynthesis I (E. coli)
Rmag_0458	PWY-7560	methylerythritol phosphate pathway II
Rmag_0462	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Rmag_0462	PWY-6596	adenosine nucleotides degradation I
Rmag_0462	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0470	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Rmag_0470	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Rmag_0474	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rmag_0477	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0479	PWY-6700	queuosine biosynthesis
Rmag_0483	PWY-4381	fatty acid biosynthesis initiation I
Rmag_0491	PWY-2301	<i>myo</i>-inositol biosynthesis
Rmag_0491	PWY-4702	phytate degradation I
Rmag_0491	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Rmag_0496	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Rmag_0496	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Rmag_0498	PWY-381	nitrate reduction II (assimilatory)
Rmag_0498	PWY-5675	nitrate reduction V (assimilatory)
Rmag_0498	PWY-6549	L-glutamine biosynthesis III
Rmag_0498	PWY-6963	ammonia assimilation cycle I
Rmag_0498	PWY-6964	ammonia assimilation cycle II
Rmag_0499	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Rmag_0500	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Rmag_0500	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Rmag_0500	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Rmag_0500	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Rmag_0504	PWY-6167	flavin biosynthesis II (archaea)
Rmag_0504	PWY-6168	flavin biosynthesis III (fungi)
Rmag_0504	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0505	PWY-6167	flavin biosynthesis II (archaea)
Rmag_0505	PWY-6168	flavin biosynthesis III (fungi)
Rmag_0505	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rmag_0506	PWY-6167	flavin biosynthesis II (archaea)
Rmag_0506	PWY-6168	flavin biosynthesis III (fungi)
Rmag_0518	PWY-5958	acridone alkaloid biosynthesis
Rmag_0518	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Rmag_0518	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Rmag_0523	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rmag_0523	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rmag_0523	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Rmag_0523	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rmag_0523	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0523	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0523	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rmag_0523	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Rmag_0524	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Rmag_0524	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rmag_0524	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Rmag_0524	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rmag_0524	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0524	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0524	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rmag_0524	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Rmag_0529	PWY-5101	L-isoleucine biosynthesis II
Rmag_0529	PWY-5103	L-isoleucine biosynthesis III
Rmag_0529	PWY-5104	L-isoleucine biosynthesis IV
Rmag_0529	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Rmag_0531	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0538	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rmag_0542	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Rmag_0542	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Rmag_0543	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Rmag_0543	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Rmag_0543	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Rmag_0550	PWY-2941	L-lysine biosynthesis II
Rmag_0550	PWY-5097	L-lysine biosynthesis VI
Rmag_0555	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Rmag_0555	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Rmag_0555	PWY-5989	stearate biosynthesis II (bacteria and plants)
Rmag_0555	PWY-5994	palmitate biosynthesis I (animals and fungi)
Rmag_0555	PWY-6113	superpathway of mycolate biosynthesis
Rmag_0555	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Rmag_0555	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Rmag_0555	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rmag_0555	PWYG-321	mycolate biosynthesis
Rmag_0559	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0564	PWY-6703	preQ<sub>0</sub> biosynthesis
Rmag_0577	PWY-6823	molybdenum cofactor biosynthesis
Rmag_0577	PWY-6891	thiazole biosynthesis II (Bacillus)
Rmag_0577	PWY-6892	thiazole biosynthesis I (E. coli)
Rmag_0577	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Rmag_0579	PWY-6936	seleno-amino acid biosynthesis
Rmag_0579	PWY-7274	D-cycloserine biosynthesis
Rmag_0583	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rmag_0584	PWY-5057	L-valine degradation II
Rmag_0584	PWY-5076	L-leucine degradation III
Rmag_0584	PWY-5078	L-isoleucine degradation II
Rmag_0584	PWY-5101	L-isoleucine biosynthesis II
Rmag_0584	PWY-5103	L-isoleucine biosynthesis III
Rmag_0584	PWY-5104	L-isoleucine biosynthesis IV
Rmag_0584	PWY-5108	L-isoleucine biosynthesis V
Rmag_0585	PWY-2941	L-lysine biosynthesis II
Rmag_0585	PWY-2942	L-lysine biosynthesis III
Rmag_0585	PWY-5097	L-lysine biosynthesis VI
Rmag_0585	PWY-6559	spermidine biosynthesis II
Rmag_0585	PWY-6562	norspermidine biosynthesis
Rmag_0585	PWY-7153	grixazone biosynthesis
Rmag_0593	PWY-7205	CMP phosphorylation
Rmag_0600	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rmag_0600	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rmag_0608	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Rmag_0608	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Rmag_0608	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Rmag_0608	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Rmag_0608	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Rmag_0608	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Rmag_0608	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Rmag_0608	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Rmag_0608	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Rmag_0608	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Rmag_0610	PWY-6012	acyl carrier protein metabolism I
Rmag_0610	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Rmag_0616	PWY-3841	folate transformations II
Rmag_0616	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Rmag_0616	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Rmag_0616	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Rmag_0616	PWY-7199	pyrimidine deoxyribonucleosides salvage
Rmag_0616	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Rmag_0623	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rmag_0624	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Rmag_0626	PWY-3461	L-tyrosine biosynthesis II
Rmag_0626	PWY-3462	L-phenylalanine biosynthesis II
Rmag_0626	PWY-6120	L-tyrosine biosynthesis III
Rmag_0626	PWY-6627	salinosporamide A biosynthesis
Rmag_0626	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Rmag_0632	PWY-1622	formaldehyde assimilation I (serine pathway)
Rmag_0632	PWY-181	photorespiration
Rmag_0632	PWY-2161	folate polyglutamylation
Rmag_0632	PWY-2201	folate transformations I
Rmag_0632	PWY-3661	glycine betaine degradation I
Rmag_0632	PWY-3661-1	glycine betaine degradation II (mammalian)
Rmag_0632	PWY-3841	folate transformations II
Rmag_0632	PWY-5497	purine nucleobases degradation II (anaerobic)
Rmag_0638	PWY-5663	tetrahydrobiopterin biosynthesis I
Rmag_0638	PWY-5664	tetrahydrobiopterin biosynthesis II
Rmag_0638	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rmag_0638	PWY-6703	preQ<sub>0</sub> biosynthesis
Rmag_0638	PWY-6983	tetrahydrobiopterin biosynthesis III
Rmag_0638	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Rmag_0654	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Rmag_0654	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Rmag_0654	PWY-5989	stearate biosynthesis II (bacteria and plants)
Rmag_0654	PWY-6113	superpathway of mycolate biosynthesis
Rmag_0654	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Rmag_0654	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Rmag_0654	PWY-7096	triclosan resistance
Rmag_0654	PWYG-321	mycolate biosynthesis
Rmag_0668	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Rmag_0670	PWY-5381	pyridine nucleotide cycling (plants)
Rmag_0670	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Rmag_0670	PWY-6596	adenosine nucleotides degradation I
Rmag_0670	PWY-6606	guanosine nucleotides degradation II
Rmag_0670	PWY-6607	guanosine nucleotides degradation I
Rmag_0670	PWY-6608	guanosine nucleotides degradation III
Rmag_0670	PWY-7185	UTP and CTP dephosphorylation I
Rmag_0674	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Rmag_0674	PWY-7177	UTP and CTP dephosphorylation II
Rmag_0674	PWY-7185	UTP and CTP dephosphorylation I
Rmag_0688	PWY-6683	sulfate reduction III (assimilatory)
Rmag_0689	PWY-6823	molybdenum cofactor biosynthesis
Rmag_0690	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Rmag_0691	PWY-6823	molybdenum cofactor biosynthesis
Rmag_0693	PWY-6823	molybdenum cofactor biosynthesis
Rmag_0701	PWY-5532	adenosine nucleotides degradation IV
Rmag_0701	PWY-5723	Rubisco shunt
Rmag_0704	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rmag_0730	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rmag_0738	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rmag_0738	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Rmag_0739	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rmag_0755	PWY-7560	methylerythritol phosphate pathway II
Rmag_0756	PWY-7560	methylerythritol phosphate pathway II
Rmag_0757	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rmag_0757	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rmag_0758	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rmag_0758	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rmag_0759	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rmag_0759	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rmag_0765	PWY-2781	<i>cis</i>-zeatin biosynthesis
Rmag_0766	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Rmag_0766	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Rmag_0772	PWY-6936	seleno-amino acid biosynthesis
Rmag_0783	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rmag_0783	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Rmag_0784	PWY-4983	L-citrulline-nitric oxide cycle
Rmag_0784	PWY-4984	urea cycle
Rmag_0784	PWY-5	canavanine biosynthesis
Rmag_0784	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rmag_0784	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rmag_0793	PWY-5392	reductive TCA cycle II
Rmag_0793	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Rmag_0793	PWY-5690	TCA cycle II (plants and fungi)
Rmag_0793	PWY-5913	TCA cycle VI (obligate autotrophs)
Rmag_0793	PWY-6728	methylaspartate cycle
Rmag_0793	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Rmag_0793	PWY-7254	TCA cycle VII (acetate-producers)
Rmag_0793	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Rmag_0809	PWY-5958	acridone alkaloid biosynthesis
Rmag_0809	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Rmag_0809	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Rmag_0828	PWY-2941	L-lysine biosynthesis II
Rmag_0828	PWY-2942	L-lysine biosynthesis III
Rmag_0828	PWY-5097	L-lysine biosynthesis VI
Rmag_0831	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Rmag_0831	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Rmag_0834	PWY-6891	thiazole biosynthesis II (Bacillus)
Rmag_0834	PWY-6892	thiazole biosynthesis I (E. coli)
Rmag_0837	PWY-6123	inosine-5'-phosphate biosynthesis I
Rmag_0837	PWY-7234	inosine-5'-phosphate biosynthesis III
Rmag_0840	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Rmag_0840	PWY-2201	folate transformations I
Rmag_0840	PWY-3841	folate transformations II
Rmag_0840	PWY-5030	L-histidine degradation III
Rmag_0840	PWY-5497	purine nucleobases degradation II (anaerobic)
Rmag_0840	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Rmag_0841	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Rmag_0841	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Rmag_0846	PWY-5155	&beta;-alanine biosynthesis III
Rmag_0847	PWY-6339	syringate degradation
Rmag_0849	PWY-6339	syringate degradation
Rmag_0851	PWY-2201	folate transformations I
Rmag_0851	PWY-3841	folate transformations II
Rmag_0853	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rmag_0853	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Rmag_0869	PWY-6683	sulfate reduction III (assimilatory)
Rmag_0870	PWY-6683	sulfate reduction III (assimilatory)
Rmag_0875	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rmag_0875	PWY-5686	UMP biosynthesis
Rmag_0875	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rmag_0877	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rmag_0877	PWY-5686	UMP biosynthesis
Rmag_0877	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rmag_0883	PWY-6749	CMP-legionaminate biosynthesis I
Rmag_0884	PWY-3801	sucrose degradation II (sucrose synthase)
Rmag_0884	PWY-5054	sorbitol biosynthesis I
Rmag_0884	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Rmag_0884	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Rmag_0884	PWY-5659	GDP-mannose biosynthesis
Rmag_0884	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rmag_0884	PWY-621	sucrose degradation III (sucrose invertase)
Rmag_0884	PWY-622	starch biosynthesis
Rmag_0884	PWY-6531	mannitol cycle
Rmag_0884	PWY-6981	chitin biosynthesis
Rmag_0884	PWY-7238	sucrose biosynthesis II
Rmag_0884	PWY-7347	sucrose biosynthesis III
Rmag_0884	PWY-7385	1,3-propanediol biosynthesis (engineered)
Rmag_0885	PWY-3801	sucrose degradation II (sucrose synthase)
Rmag_0885	PWY-6527	stachyose degradation
Rmag_0885	PWY-6981	chitin biosynthesis
Rmag_0885	PWY-7238	sucrose biosynthesis II
Rmag_0885	PWY-7343	UDP-glucose biosynthesis
Rmag_0898	PWY-5659	GDP-mannose biosynthesis
Rmag_0898	PWY-6073	alginate biosynthesis I (algal)
Rmag_0898	PWY-6082	alginate biosynthesis II (bacterial)
Rmag_0898	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Rmag_0902	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Rmag_0903	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Rmag_0903	PWY-5739	GDP-D-perosamine biosynthesis
Rmag_0903	PWY-5740	GDP-L-colitose biosynthesis
Rmag_0903	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Rmag_0904	PWY-5659	GDP-mannose biosynthesis
Rmag_0904	PWY-6073	alginate biosynthesis I (algal)
Rmag_0904	PWY-6082	alginate biosynthesis II (bacterial)
Rmag_0904	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Rmag_0909	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Rmag_0910	PWY-5381	pyridine nucleotide cycling (plants)
Rmag_0910	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Rmag_0910	PWY-6596	adenosine nucleotides degradation I
Rmag_0910	PWY-6606	guanosine nucleotides degradation II
Rmag_0910	PWY-6607	guanosine nucleotides degradation I
Rmag_0910	PWY-6608	guanosine nucleotides degradation III
Rmag_0910	PWY-7185	UTP and CTP dephosphorylation I
Rmag_0914	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0916	PWY-5367	petroselinate biosynthesis
Rmag_0916	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Rmag_0916	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Rmag_0916	PWY-5989	stearate biosynthesis II (bacteria and plants)
Rmag_0916	PWY-5994	palmitate biosynthesis I (animals and fungi)
Rmag_0916	PWY-6113	superpathway of mycolate biosynthesis
Rmag_0916	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Rmag_0916	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Rmag_0916	PWY-6951	Rmag_0916|Rmag_0916|YP_904100.1|GeneID:4555177
Rmag_0916	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Rmag_0916	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rmag_0916	PWYG-321	mycolate biosynthesis
Rmag_0917	PWY-4381	fatty acid biosynthesis initiation I
Rmag_0917	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Rmag_0917	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rmag_0929	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
Rmag_0929	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Rmag_0929	PWY-6148	tetrahydromethanopterin biosynthesis
Rmag_0931	PWY-5958	acridone alkaloid biosynthesis
Rmag_0931	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Rmag_0931	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Rmag_0934	PWY-5667	CDP-diacylglycerol biosynthesis I
Rmag_0934	PWY-5981	CDP-diacylglycerol biosynthesis III
Rmag_0951	PWY-2941	L-lysine biosynthesis II
Rmag_0951	PWY-2942	L-lysine biosynthesis III
Rmag_0951	PWY-5097	L-lysine biosynthesis VI
Rmag_0951	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rmag_0951	PWY-6559	spermidine biosynthesis II
Rmag_0951	PWY-6562	norspermidine biosynthesis
Rmag_0951	PWY-7153	grixazone biosynthesis
Rmag_0951	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rmag_0952	PWY-5663	tetrahydrobiopterin biosynthesis I
Rmag_0952	PWY-5664	tetrahydrobiopterin biosynthesis II
Rmag_0952	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rmag_0952	PWY-6703	preQ<sub>0</sub> biosynthesis
Rmag_0952	PWY-6983	tetrahydrobiopterin biosynthesis III
Rmag_0952	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Rmag_0956	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rmag_0956	PWY-6148	tetrahydromethanopterin biosynthesis
Rmag_0956	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Rmag_0956	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rmag_0957	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Rmag_0957	PWY-6148	tetrahydromethanopterin biosynthesis
Rmag_0957	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Rmag_0957	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Rmag_0963	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Rmag_0963	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Rmag_0966	PWY-5316	nicotine biosynthesis
Rmag_0966	PWY-7342	superpathway of nicotine biosynthesis
Rmag_0969	PWY-6123	inosine-5'-phosphate biosynthesis I
Rmag_0969	PWY-6124	inosine-5'-phosphate biosynthesis II
Rmag_0969	PWY-7234	inosine-5'-phosphate biosynthesis III
Rmag_0982	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Rmag_0982	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Rmag_0983	PWY-7039	phosphatidate metabolism, as a signaling molecule
Rmag_0985	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Rmag_0985	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Rmag_0985	PWY-6936	seleno-amino acid biosynthesis
Rmag_0985	PWY-702	L-methionine biosynthesis II
Rmag_0988	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Rmag_0988	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rmag_0988	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Rmag_0988	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Rmag_0991	PWY-6123	inosine-5'-phosphate biosynthesis I
Rmag_0991	PWY-6124	inosine-5'-phosphate biosynthesis II
Rmag_0991	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_0991	PWY-7234	inosine-5'-phosphate biosynthesis III
Rmag_0992	PWY-5747	2-methylcitrate cycle II
Rmag_0995	PWY-5686	UMP biosynthesis
Rmag_0999	PWY-2161	folate polyglutamylation
Rmag_1001	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Rmag_1001	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Rmag_1001	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Rmag_1001	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Rmag_1003	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Rmag_1003	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Rmag_1003	PWY-5989	stearate biosynthesis II (bacteria and plants)
Rmag_1003	PWY-5994	palmitate biosynthesis I (animals and fungi)
Rmag_1003	PWY-6113	superpathway of mycolate biosynthesis
Rmag_1003	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Rmag_1003	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Rmag_1003	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rmag_1003	PWYG-321	mycolate biosynthesis
Rmag_1008	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Rmag_1015	PWY-6840	homoglutathione biosynthesis
Rmag_1015	PWY-7255	ergothioneine biosynthesis I (bacteria)
Rmag_1016	PWY-6502	oxidized GTP and dGTP detoxification
Rmag_1016	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Rmag_1016	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Rmag_1016	PWY-6897	thiamin salvage II
Rmag_1016	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Rmag_1016	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Rmag_1016	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Rmag_1016	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Rmag_1019	PWY-3841	folate transformations II
Rmag_1019	PWY-6614	tetrahydrofolate biosynthesis
Rmag_1023	PWY-7560	methylerythritol phosphate pathway II
Rmag_1024	PWY-4381	fatty acid biosynthesis initiation I
Rmag_1024	PWY-5743	3-hydroxypropanoate cycle
Rmag_1024	PWY-5744	glyoxylate assimilation
Rmag_1024	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Rmag_1024	PWY-6679	jadomycin biosynthesis
Rmag_1024	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Rmag_1026	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Rmag_1026	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Rmag_1030	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Rmag_1043	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Rmag_1043	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Rmag_1045	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_1047	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Rmag_1054	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Rmag_1054	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Rmag_1054	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Rmag_1058	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Rmag_1058	PWY-6416	quinate degradation II
Rmag_1058	PWY-6707	gallate biosynthesis
Rmag_1061	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Rmag_1061	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Rmag_1064	PWY-5839	menaquinol-7 biosynthesis
Rmag_1064	PWY-5844	menaquinol-9 biosynthesis
Rmag_1064	PWY-5849	menaquinol-6 biosynthesis
Rmag_1064	PWY-5890	menaquinol-10 biosynthesis
Rmag_1064	PWY-5891	menaquinol-11 biosynthesis
Rmag_1064	PWY-5892	menaquinol-12 biosynthesis
Rmag_1064	PWY-5895	menaquinol-13 biosynthesis
Rmag_1070	PWY-1042	glycolysis IV (plant cytosol)
Rmag_1070	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Rmag_1070	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rmag_1070	PWY-5723	Rubisco shunt
Rmag_1070	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rmag_1070	PWY-6886	1-butanol autotrophic biosynthesis
Rmag_1070	PWY-6901	superpathway of glucose and xylose degradation
Rmag_1070	PWY-7003	glycerol degradation to butanol
Rmag_1070	PWY-7124	ethylene biosynthesis V (engineered)
Rmag_1070	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Rmag_1071	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Rmag_1071	PWY-5723	Rubisco shunt
Rmag_1076	PWY-1042	glycolysis IV (plant cytosol)
Rmag_1076	PWY-5484	glycolysis II (from fructose 6-phosphate)
Rmag_1076	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Rmag_1076	PWY-7003	glycerol degradation to butanol
