Caul_0027	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Caul_0027	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Caul_0048	PWY-5194	siroheme biosynthesis
Caul_0048	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Caul_0056	PWY-6823	molybdenum cofactor biosynthesis
Caul_0058	PWY-6823	molybdenum cofactor biosynthesis
Caul_0063	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Caul_0063	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Caul_0066	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Caul_0066	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_0066	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Caul_0066	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Caul_0070	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Caul_0070	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_0070	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Caul_0070	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Caul_0078	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Caul_0082	PWY-6854	ethylene biosynthesis III (microbes)
Caul_0101	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Caul_0102	PWY-7205	CMP phosphorylation
Caul_0111	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Caul_0111	PWY-7118	chitin degradation to ethanol
Caul_0112	PWY-6167	flavin biosynthesis II (archaea)
Caul_0116	PWY-5667	CDP-diacylglycerol biosynthesis I
Caul_0116	PWY-5981	CDP-diacylglycerol biosynthesis III
Caul_0118	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Caul_0118	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Caul_0119	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Caul_0119	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Caul_0125	PWY-1361	benzoyl-CoA degradation I (aerobic)
Caul_0125	PWY-5109	2-methylbutanoate biosynthesis
Caul_0125	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Caul_0125	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Caul_0125	PWY-5177	glutaryl-CoA degradation
Caul_0125	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_0125	PWY-6435	4-hydroxybenzoate biosynthesis V
Caul_0125	PWY-6583	pyruvate fermentation to butanol I
Caul_0125	PWY-6863	pyruvate fermentation to hexanol
Caul_0125	PWY-6883	pyruvate fermentation to butanol II
Caul_0125	PWY-6944	androstenedione degradation
Caul_0125	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Caul_0125	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Caul_0125	PWY-7007	methyl ketone biosynthesis
Caul_0125	PWY-7046	4-coumarate degradation (anaerobic)
Caul_0125	PWY-7094	fatty acid salvage
Caul_0125	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Caul_0125	PWY-735	jasmonic acid biosynthesis
Caul_0125	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Caul_0136	PWY-3821	galactose degradation III
Caul_0136	PWY-6317	galactose degradation I (Leloir pathway)
Caul_0136	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Caul_0136	PWY-6527	stachyose degradation
Caul_0136	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Caul_0136	PWY-7344	UDP-D-galactose biosynthesis
Caul_0137	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Caul_0172	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Caul_0211	PWY-5506	methanol oxidation to formaldehyde IV
Caul_0213	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Caul_0218	PWY-6829	tRNA methylation (yeast)
Caul_0218	PWY-7285	methylwyosine biosynthesis
Caul_0218	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Caul_0229	PWY-5392	reductive TCA cycle II
Caul_0229	PWY-5537	pyruvate fermentation to acetate V
Caul_0229	PWY-5538	pyruvate fermentation to acetate VI
Caul_0229	PWY-5690	TCA cycle II (plants and fungi)
Caul_0229	PWY-5913	TCA cycle VI (obligate autotrophs)
Caul_0229	PWY-6728	methylaspartate cycle
Caul_0229	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Caul_0229	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Caul_0230	PWY-5392	reductive TCA cycle II
Caul_0230	PWY-5537	pyruvate fermentation to acetate V
Caul_0230	PWY-5538	pyruvate fermentation to acetate VI
Caul_0230	PWY-5690	TCA cycle II (plants and fungi)
Caul_0230	PWY-5913	TCA cycle VI (obligate autotrophs)
Caul_0230	PWY-6728	methylaspartate cycle
Caul_0230	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Caul_0230	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Caul_0231	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Caul_0232	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Caul_0235	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Caul_0235	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Caul_0256	PWY-6348	phosphate acquisition
Caul_0256	PWY-6357	phosphate utilization in cell wall regeneration
Caul_0256	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Caul_0256	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Caul_0289	PWY-6906	chitin derivatives degradation
Caul_0289	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Caul_0289	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Caul_0293	PWY-6902	chitin degradation II
Caul_0295	PWY-7310	D-glucosaminate degradation
Caul_0311	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Caul_0311	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Caul_0311	PWY-6164	3-dehydroquinate biosynthesis I
Caul_0313	PWY-6527	stachyose degradation
Caul_0315	PWY-6527	stachyose degradation
Caul_0372	PWY-6840	homoglutathione biosynthesis
Caul_0372	PWY-7255	ergothioneine biosynthesis I (bacteria)
Caul_0378	PWY-5386	methylglyoxal degradation I
Caul_0382	PWY-3561	choline biosynthesis III
Caul_0382	PWY-7039	phosphatidate metabolism, as a signaling molecule
Caul_0385	PWY-5344	L-homocysteine biosynthesis
Caul_0388	PWY-5686	UMP biosynthesis
Caul_0391	PWY-4041	&gamma;-glutamyl cycle
Caul_0391	PWY-5826	hypoglycin biosynthesis
Caul_0417	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Caul_0417	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Caul_0420	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Caul_0425	PWY-723	alkylnitronates degradation
Caul_0501	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_0501	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_0519	PWY-4041	&gamma;-glutamyl cycle
Caul_0519	PWY-5826	hypoglycin biosynthesis
Caul_0521	PWY-3461	L-tyrosine biosynthesis II
Caul_0521	PWY-3462	L-phenylalanine biosynthesis II
Caul_0521	PWY-6120	L-tyrosine biosynthesis III
Caul_0521	PWY-6627	salinosporamide A biosynthesis
Caul_0557	PWY-6967	methylamine degradation I
Caul_0560	PWY-6967	methylamine degradation I
Caul_0575	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Caul_0592	PWY-1361	benzoyl-CoA degradation I (aerobic)
Caul_0592	PWY-5109	2-methylbutanoate biosynthesis
Caul_0592	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Caul_0592	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Caul_0592	PWY-5177	glutaryl-CoA degradation
Caul_0592	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_0592	PWY-6435	4-hydroxybenzoate biosynthesis V
Caul_0592	PWY-6583	pyruvate fermentation to butanol I
Caul_0592	PWY-6863	pyruvate fermentation to hexanol
Caul_0592	PWY-6883	pyruvate fermentation to butanol II
Caul_0592	PWY-6944	androstenedione degradation
Caul_0592	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Caul_0592	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Caul_0592	PWY-7007	methyl ketone biosynthesis
Caul_0592	PWY-7046	4-coumarate degradation (anaerobic)
Caul_0592	PWY-7094	fatty acid salvage
Caul_0592	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Caul_0592	PWY-735	jasmonic acid biosynthesis
Caul_0592	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Caul_0593	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Caul_0636	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
Caul_0658	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Caul_0677	PWY-3341	L-proline biosynthesis III
Caul_0677	PWY-4981	L-proline biosynthesis II (from arginine)
Caul_0677	PWY-6344	L-ornithine degradation II (Stickland reaction)
Caul_0699	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Caul_0699	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Caul_0701	PWY-3781	aerobic respiration I (cytochrome c)
Caul_0701	PWY-6692	Fe(II) oxidation
Caul_0701	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
Caul_0701	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_0711	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Caul_0716	PWY-6556	pyrimidine ribonucleosides salvage II
Caul_0716	PWY-7181	pyrimidine deoxyribonucleosides degradation
Caul_0716	PWY-7193	pyrimidine ribonucleosides salvage I
Caul_0716	PWY-7199	pyrimidine deoxyribonucleosides salvage
Caul_0721	PWY-6164	3-dehydroquinate biosynthesis I
Caul_0722	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Caul_0734	PWY-4381	fatty acid biosynthesis initiation I
Caul_0734	PWY-5743	3-hydroxypropanoate cycle
Caul_0734	PWY-5744	glyoxylate assimilation
Caul_0734	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_0734	PWY-6679	jadomycin biosynthesis
Caul_0734	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_0738	PWY-723	alkylnitronates degradation
Caul_0746	PWY-2301	<i>myo</i>-inositol biosynthesis
Caul_0746	PWY-4702	phytate degradation I
Caul_0746	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Caul_0750	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Caul_0750	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Caul_0750	PWY-6897	thiamin salvage II
Caul_0750	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Caul_0750	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Caul_0750	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Caul_0750	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Caul_0765	PWY-1042	glycolysis IV (plant cytosol)
Caul_0765	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Caul_0765	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_0765	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_0765	PWY-7385	1,3-propanediol biosynthesis (engineered)
Caul_0766	PWY-1042	glycolysis IV (plant cytosol)
Caul_0766	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_0766	PWY-6886	1-butanol autotrophic biosynthesis
Caul_0766	PWY-6901	superpathway of glucose and xylose degradation
Caul_0766	PWY-7003	glycerol degradation to butanol
Caul_0767	PWY-1042	glycolysis IV (plant cytosol)
Caul_0767	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_0767	PWY-6901	superpathway of glucose and xylose degradation
Caul_0767	PWY-7003	glycerol degradation to butanol
Caul_0798	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Caul_0798	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Caul_0813	PWY-1361	benzoyl-CoA degradation I (aerobic)
Caul_0813	PWY-5109	2-methylbutanoate biosynthesis
Caul_0813	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Caul_0813	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Caul_0813	PWY-5177	glutaryl-CoA degradation
Caul_0813	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_0813	PWY-6435	4-hydroxybenzoate biosynthesis V
Caul_0813	PWY-6583	pyruvate fermentation to butanol I
Caul_0813	PWY-6863	pyruvate fermentation to hexanol
Caul_0813	PWY-6883	pyruvate fermentation to butanol II
Caul_0813	PWY-6944	androstenedione degradation
Caul_0813	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Caul_0813	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Caul_0813	PWY-7007	methyl ketone biosynthesis
Caul_0813	PWY-7046	4-coumarate degradation (anaerobic)
Caul_0813	PWY-7094	fatty acid salvage
Caul_0813	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Caul_0813	PWY-735	jasmonic acid biosynthesis
Caul_0813	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Caul_0816	PWY-6610	adenine and adenosine salvage IV
Caul_0832	PWY-2723	trehalose degradation V
Caul_0832	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Caul_0832	PWY-5661	GDP-glucose biosynthesis
Caul_0832	PWY-7238	sucrose biosynthesis II
Caul_0832	PWY-7385	1,3-propanediol biosynthesis (engineered)
Caul_0836	PWY-5743	3-hydroxypropanoate cycle
Caul_0836	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_0836	PWY-6728	methylaspartate cycle
Caul_0836	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Caul_0850	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Caul_0850	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Caul_0890	PWY-3781	aerobic respiration I (cytochrome c)
Caul_0890	PWY-4521	arsenite oxidation I (respiratory)
Caul_0890	PWY-6692	Fe(II) oxidation
Caul_0890	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_0902	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_0902	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_0904	PWY-6123	inosine-5'-phosphate biosynthesis I
Caul_0904	PWY-7234	inosine-5'-phosphate biosynthesis III
Caul_0924	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_0937	PWY-6502	oxidized GTP and dGTP detoxification
Caul_0947	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Caul_0947	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Caul_0947	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Caul_0947	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Caul_0947	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Caul_0947	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Caul_0947	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Caul_0947	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Caul_0947	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Caul_0947	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Caul_0950	PWY-2941	L-lysine biosynthesis II
Caul_0950	PWY-2942	L-lysine biosynthesis III
Caul_0950	PWY-5097	L-lysine biosynthesis VI
Caul_0950	PWY-6559	spermidine biosynthesis II
Caul_0950	PWY-6562	norspermidine biosynthesis
Caul_0950	PWY-7153	grixazone biosynthesis
Caul_0957	PWY-7560	methylerythritol phosphate pathway II
Caul_0966	PWY-6483	ceramide degradation
Caul_0966	PWY-7119	sphingolipid recycling and degradation (yeast)
Caul_1009	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Caul_1021	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Caul_1023	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Caul_1037	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_1037	PWY-5686	UMP biosynthesis
Caul_1037	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_1044	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Caul_1044	PWY-6853	ethylene biosynthesis II (microbes)
Caul_1044	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Caul_1049	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Caul_1049	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Caul_1049	PWY-6268	adenosylcobalamin salvage from cobalamin
Caul_1049	PWY-6269	adenosylcobalamin salvage from cobinamide II
Caul_1081	PWY-6703	preQ<sub>0</sub> biosynthesis
Caul_1082	PWY-6703	preQ<sub>0</sub> biosynthesis
Caul_1110	PWY-2201	folate transformations I
Caul_1110	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_1207	PWY-6749	CMP-legionaminate biosynthesis I
Caul_1210	PWY-1622	formaldehyde assimilation I (serine pathway)
Caul_1210	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_1232	PWY-4981	L-proline biosynthesis II (from arginine)
Caul_1232	PWY-4984	urea cycle
Caul_1232	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_1286	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Caul_1286	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Caul_1286	PWY-7242	D-fructuronate degradation
Caul_1286	PWY-7310	D-glucosaminate degradation
Caul_1287	PWY-7130	L-glucose degradation
Caul_1288	PWY-5101	L-isoleucine biosynthesis II
Caul_1288	PWY-5103	L-isoleucine biosynthesis III
Caul_1288	PWY-5104	L-isoleucine biosynthesis IV
Caul_1288	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_1291	PWY-6807	xyloglucan degradation II (exoglucanase)
Caul_1295	PWY-5028	L-histidine degradation II
Caul_1295	PWY-5030	L-histidine degradation III
Caul_1297	PWY-5028	L-histidine degradation II
Caul_1297	PWY-5030	L-histidine degradation III
Caul_1298	PWY-5028	L-histidine degradation II
Caul_1298	PWY-5030	L-histidine degradation III
Caul_1311	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Caul_1311	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Caul_1348	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Caul_1348	PWY-7494	choline degradation IV
Caul_1377	PWY-5491	diethylphosphate degradation
Caul_1409	PWY-5642	2,4-dinitrotoluene degradation
Caul_1409	PWY-6373	acrylate degradation
Caul_1410	PWY-6454	vancomycin resistance I
Caul_1410	PWY-6455	vancomycin resistance II
Caul_1438	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Caul_1439	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Caul_1439	PWY-6855	chitin degradation I (archaea)
Caul_1439	PWY-6906	chitin derivatives degradation
Caul_1440	PWY-5101	L-isoleucine biosynthesis II
Caul_1440	PWY-5103	L-isoleucine biosynthesis III
Caul_1440	PWY-5104	L-isoleucine biosynthesis IV
Caul_1440	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_1441	PWY-2723	trehalose degradation V
Caul_1441	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Caul_1441	PWY-5661	GDP-glucose biosynthesis
Caul_1441	PWY-7238	sucrose biosynthesis II
Caul_1441	PWY-7385	1,3-propanediol biosynthesis (engineered)
Caul_1443	PWY-1042	glycolysis IV (plant cytosol)
Caul_1443	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Caul_1443	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_1443	PWY-5723	Rubisco shunt
Caul_1443	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_1443	PWY-6886	1-butanol autotrophic biosynthesis
Caul_1443	PWY-6901	superpathway of glucose and xylose degradation
Caul_1443	PWY-7003	glycerol degradation to butanol
Caul_1443	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Caul_1443	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Caul_1485	PWY-6871	3-methylbutanol biosynthesis
Caul_1516	PWY-5686	UMP biosynthesis
Caul_1517	PWY-5686	UMP biosynthesis
Caul_1520	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Caul_1635	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Caul_1662	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_1696	PWY-1361	benzoyl-CoA degradation I (aerobic)
Caul_1696	PWY-2361	3-oxoadipate degradation
Caul_1696	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Caul_1705	PWY-4381	fatty acid biosynthesis initiation I
Caul_1705	PWY-5743	3-hydroxypropanoate cycle
Caul_1705	PWY-5744	glyoxylate assimilation
Caul_1705	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_1705	PWY-6679	jadomycin biosynthesis
Caul_1705	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_1714	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Caul_1714	PWY-2201	folate transformations I
Caul_1714	PWY-3841	folate transformations II
Caul_1714	PWY-5030	L-histidine degradation III
Caul_1714	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_1714	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Caul_1716	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_1716	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_1719	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Caul_1719	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Caul_1719	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Caul_1721	PWY-4261	glycerol degradation I
Caul_1724	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Caul_1724	PWY-6148	tetrahydromethanopterin biosynthesis
Caul_1724	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Caul_1724	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Caul_1729	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Caul_1729	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Caul_1732	PWY-5686	UMP biosynthesis
Caul_1734	PWY-6012	acyl carrier protein metabolism I
Caul_1734	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Caul_1739	PWY-7153	grixazone biosynthesis
Caul_1749	PWY-5278	sulfite oxidation III
Caul_1749	PWY-5340	sulfate activation for sulfonation
Caul_1749	PWY-6683	sulfate reduction III (assimilatory)
Caul_1749	PWY-6932	selenate reduction
Caul_1750	PWY-5278	sulfite oxidation III
Caul_1750	PWY-5340	sulfate activation for sulfonation
Caul_1750	PWY-6683	sulfate reduction III (assimilatory)
Caul_1750	PWY-6932	selenate reduction
Caul_1756	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Caul_1756	PWY-7248	pectin degradation III
Caul_1757	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Caul_1758	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Caul_1759	PWY-1622	formaldehyde assimilation I (serine pathway)
Caul_1759	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Caul_1759	PWY-5913	TCA cycle VI (obligate autotrophs)
Caul_1759	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_1759	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Caul_1759	PWY-6549	L-glutamine biosynthesis III
Caul_1759	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Caul_1759	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Caul_1759	PWY-7124	ethylene biosynthesis V (engineered)
Caul_1760	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Caul_1760	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Caul_1760	PWY-7242	D-fructuronate degradation
Caul_1760	PWY-7310	D-glucosaminate degradation
Caul_1779	PWY-5941	glycogen degradation II (eukaryotic)
Caul_1779	PWY-6724	starch degradation II
Caul_1779	PWY-6737	starch degradation V
Caul_1779	PWY-7238	sucrose biosynthesis II
Caul_1785	PWY-4202	arsenate detoxification I (glutaredoxin)
Caul_1785	PWY-4621	arsenate detoxification II (glutaredoxin)
Caul_1805	PWY-2723	trehalose degradation V
Caul_1805	PWY-6317	galactose degradation I (Leloir pathway)
Caul_1805	PWY-6737	starch degradation V
Caul_1844	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Caul_1870	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Caul_1873	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Caul_1873	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Caul_1875	PWY-4381	fatty acid biosynthesis initiation I
Caul_1875	PWY-5743	3-hydroxypropanoate cycle
Caul_1875	PWY-5744	glyoxylate assimilation
Caul_1875	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_1875	PWY-6679	jadomycin biosynthesis
Caul_1875	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_1896	PWY-1361	benzoyl-CoA degradation I (aerobic)
Caul_1896	PWY-5109	2-methylbutanoate biosynthesis
Caul_1896	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Caul_1896	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Caul_1896	PWY-5177	glutaryl-CoA degradation
Caul_1896	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_1896	PWY-6435	4-hydroxybenzoate biosynthesis V
Caul_1896	PWY-6583	pyruvate fermentation to butanol I
Caul_1896	PWY-6863	pyruvate fermentation to hexanol
Caul_1896	PWY-6883	pyruvate fermentation to butanol II
Caul_1896	PWY-6944	androstenedione degradation
Caul_1896	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Caul_1896	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Caul_1896	PWY-7007	methyl ketone biosynthesis
Caul_1896	PWY-7046	4-coumarate degradation (anaerobic)
Caul_1896	PWY-7094	fatty acid salvage
Caul_1896	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Caul_1896	PWY-735	jasmonic acid biosynthesis
Caul_1896	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Caul_1942	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Caul_1942	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_1942	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Caul_1942	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Caul_1946	PWY-5676	acetyl-CoA fermentation to butanoate II
Caul_1946	PWY-5741	ethylmalonyl-CoA pathway
Caul_1946	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Caul_1954	PWY-5482	pyruvate fermentation to acetate II
Caul_1954	PWY-5485	pyruvate fermentation to acetate IV
Caul_1954	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_1955	PWY-1281	sulfoacetaldehyde degradation I
Caul_1955	PWY-5482	pyruvate fermentation to acetate II
Caul_1955	PWY-5485	pyruvate fermentation to acetate IV
Caul_1955	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_1955	PWY-6637	sulfolactate degradation II
Caul_2001	PWY-3841	folate transformations II
Caul_2001	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_2001	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_2001	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Caul_2001	PWY-7199	pyrimidine deoxyribonucleosides salvage
Caul_2001	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Caul_2047	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Caul_2047	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Caul_2047	PWY-6269	adenosylcobalamin salvage from cobinamide II
Caul_2056	PWY-5386	methylglyoxal degradation I
Caul_2070	PWY-5530	sorbitol biosynthesis II
Caul_2070	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Caul_2129	PWY-6527	stachyose degradation
Caul_2133	PWY-6807	xyloglucan degradation II (exoglucanase)
Caul_2154	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Caul_2169	PWY-7560	methylerythritol phosphate pathway II
Caul_2179	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Caul_2179	PWY-6549	L-glutamine biosynthesis III
Caul_2179	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Caul_2179	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Caul_2190	PWY-6700	queuosine biosynthesis
Caul_2191	PWY-6700	queuosine biosynthesis
Caul_2208	PWY-6134	L-tyrosine biosynthesis IV
Caul_2208	PWY-7158	L-phenylalanine degradation V
Caul_2213	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Caul_2213	PWY-6596	adenosine nucleotides degradation I
Caul_2213	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Caul_2216	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Caul_2361	PWY-2201	folate transformations I
Caul_2361	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_2363	PWY-3661	glycine betaine degradation I
Caul_2363	PWY-4722	creatinine degradation II
Caul_2364	PWY-3661	glycine betaine degradation I
Caul_2364	PWY-4722	creatinine degradation II
Caul_2365	PWY-3661	glycine betaine degradation I
Caul_2365	PWY-4722	creatinine degradation II
Caul_2366	PWY-3661	glycine betaine degradation I
Caul_2366	PWY-4722	creatinine degradation II
Caul_2372	PWY-4041	&gamma;-glutamyl cycle
Caul_2372	PWY-5826	hypoglycin biosynthesis
Caul_2412	PWY-6527	stachyose degradation
Caul_2418	PWY-6348	phosphate acquisition
Caul_2418	PWY-6357	phosphate utilization in cell wall regeneration
Caul_2418	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Caul_2418	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Caul_2437	PWY-3781	aerobic respiration I (cytochrome c)
Caul_2437	PWY-4521	arsenite oxidation I (respiratory)
Caul_2437	PWY-6692	Fe(II) oxidation
Caul_2437	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_2438	PWY-3781	aerobic respiration I (cytochrome c)
Caul_2438	PWY-4521	arsenite oxidation I (respiratory)
Caul_2438	PWY-6692	Fe(II) oxidation
Caul_2438	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_2449	PWY-3162	L-tryptophan degradation V (side chain pathway)
Caul_2449	PWY-5057	L-valine degradation II
Caul_2449	PWY-5076	L-leucine degradation III
Caul_2449	PWY-5078	L-isoleucine degradation II
Caul_2449	PWY-5079	L-phenylalanine degradation III
Caul_2449	PWY-5082	L-methionine degradation III
Caul_2449	PWY-5480	pyruvate fermentation to ethanol I
Caul_2449	PWY-5486	pyruvate fermentation to ethanol II
Caul_2449	PWY-5751	phenylethanol biosynthesis
Caul_2449	PWY-6028	acetoin degradation
Caul_2449	PWY-6313	serotonin degradation
Caul_2449	PWY-6333	acetaldehyde biosynthesis I
Caul_2449	PWY-6342	noradrenaline and adrenaline degradation
Caul_2449	PWY-6587	pyruvate fermentation to ethanol III
Caul_2449	PWY-6802	salidroside biosynthesis
Caul_2449	PWY-6871	3-methylbutanol biosynthesis
Caul_2449	PWY-7013	L-1,2-propanediol degradation
Caul_2449	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_2449	PWY-7118	chitin degradation to ethanol
Caul_2449	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Caul_2449	PWY-7557	dehydrodiconiferyl alcohol degradation
Caul_2456	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Caul_2456	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Caul_2458	PWY-5392	reductive TCA cycle II
Caul_2458	PWY-5537	pyruvate fermentation to acetate V
Caul_2458	PWY-5538	pyruvate fermentation to acetate VI
Caul_2458	PWY-5690	TCA cycle II (plants and fungi)
Caul_2458	PWY-5913	TCA cycle VI (obligate autotrophs)
Caul_2458	PWY-6728	methylaspartate cycle
Caul_2458	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Caul_2458	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Caul_2481	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Caul_2495	PWY-6654	phosphopantothenate biosynthesis III
Caul_2502	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Caul_2502	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Caul_2502	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Caul_2502	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Caul_2506	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Caul_2517	PWY-4381	fatty acid biosynthesis initiation I
Caul_2517	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Caul_2517	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_2518	PWY-5367	petroselinate biosynthesis
Caul_2518	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Caul_2518	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Caul_2518	PWY-5989	stearate biosynthesis II (bacteria and plants)
Caul_2518	PWY-5994	palmitate biosynthesis I (animals and fungi)
Caul_2518	PWY-6113	superpathway of mycolate biosynthesis
Caul_2518	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Caul_2518	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Caul_2518	PWY-6951	Caul_2518
Caul_2518	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Caul_2518	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_2518	PWYG-321	mycolate biosynthesis
Caul_2523	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Caul_2531	PWY-5988	wound-induced proteolysis I
Caul_2531	PWY-6018	seed germination protein turnover
Caul_2538	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Caul_2538	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Caul_2538	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_2538	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_2538	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Caul_2538	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Caul_2538	PWY-7205	CMP phosphorylation
Caul_2538	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Caul_2538	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_2538	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Caul_2538	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_2538	PWY-7224	purine deoxyribonucleosides salvage
Caul_2538	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_2538	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Caul_2542	PWY-7533	gliotoxin biosynthesis
Caul_2544	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Caul_2544	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Caul_2545	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Caul_2545	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Caul_2545	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Caul_2560	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Caul_2560	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_2560	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Caul_2560	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Caul_2560	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_2560	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_2560	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_2560	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Caul_2566	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Caul_2566	PWY-6416	quinate degradation II
Caul_2566	PWY-6707	gallate biosynthesis
Caul_2568	PWY-6891	thiazole biosynthesis II (Bacillus)
Caul_2568	PWY-6892	thiazole biosynthesis I (E. coli)
Caul_2587	PWY-6823	molybdenum cofactor biosynthesis
Caul_2587	PWY-6891	thiazole biosynthesis II (Bacillus)
Caul_2587	PWY-6892	thiazole biosynthesis I (E. coli)
Caul_2587	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Caul_2593	PWY-6823	molybdenum cofactor biosynthesis
Caul_2593	PWY-6891	thiazole biosynthesis II (Bacillus)
Caul_2593	PWY-6892	thiazole biosynthesis I (E. coli)
Caul_2593	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Caul_2603	PWY-7560	methylerythritol phosphate pathway II
Caul_2664	PWY-5331	taurine biosynthesis
Caul_2680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_2680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_2681	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Caul_2699	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Caul_2699	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_2699	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_2699	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Caul_2699	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Caul_2699	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Caul_2712	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Caul_2712	PWY-5940	streptomycin biosynthesis
Caul_2715	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
Caul_2734	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Caul_2734	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Caul_2734	PWY-6269	adenosylcobalamin salvage from cobinamide II
Caul_2737	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Caul_2737	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Caul_2737	PWY-6268	adenosylcobalamin salvage from cobalamin
Caul_2737	PWY-6269	adenosylcobalamin salvage from cobinamide II
Caul_2742	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Caul_2742	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Caul_2742	PWY-6269	adenosylcobalamin salvage from cobinamide II
Caul_2743	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Caul_2743	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Caul_2743	PWY-6269	adenosylcobalamin salvage from cobinamide II
Caul_2751	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Caul_2751	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Caul_2751	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Caul_2755	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Caul_2755	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Caul_2758	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Caul_2762	PWY-1042	glycolysis IV (plant cytosol)
Caul_2762	PWY-1622	formaldehyde assimilation I (serine pathway)
Caul_2762	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Caul_2762	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_2762	PWY-5723	Rubisco shunt
Caul_2762	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_2762	PWY-6886	1-butanol autotrophic biosynthesis
Caul_2762	PWY-6901	superpathway of glucose and xylose degradation
Caul_2762	PWY-7003	glycerol degradation to butanol
Caul_2762	PWY-7124	ethylene biosynthesis V (engineered)
Caul_2762	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Caul_2765	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Caul_2765	PWY-7177	UTP and CTP dephosphorylation II
Caul_2765	PWY-7185	UTP and CTP dephosphorylation I
Caul_2769	PWY-1042	glycolysis IV (plant cytosol)
Caul_2769	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_2769	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_2769	PWY-7003	glycerol degradation to butanol
Caul_2771	PWY-5958	acridone alkaloid biosynthesis
Caul_2771	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Caul_2771	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Caul_2776	PWY-5958	acridone alkaloid biosynthesis
Caul_2776	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Caul_2776	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Caul_2780	PWY-6825	phosphatidylcholine biosynthesis V
Caul_2783	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Caul_2786	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Caul_2794	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Caul_2794	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Caul_2794	PWY-5989	stearate biosynthesis II (bacteria and plants)
Caul_2794	PWY-5994	palmitate biosynthesis I (animals and fungi)
Caul_2794	PWY-6113	superpathway of mycolate biosynthesis
Caul_2794	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Caul_2794	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Caul_2794	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_2794	PWYG-321	mycolate biosynthesis
Caul_2799	PWY-7560	methylerythritol phosphate pathway II
Caul_2807	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Caul_2814	PWY-5743	3-hydroxypropanoate cycle
Caul_2814	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_2814	PWY-6728	methylaspartate cycle
Caul_2814	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Caul_2817	PWY-3961	phosphopantothenate biosynthesis II
Caul_2818	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Caul_2818	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Caul_2820	PWY-3781	aerobic respiration I (cytochrome c)
Caul_2820	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Caul_2820	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Caul_2820	PWY-6692	Fe(II) oxidation
Caul_2821	PWY-3781	aerobic respiration I (cytochrome c)
Caul_2821	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Caul_2821	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Caul_2821	PWY-6692	Fe(II) oxidation
Caul_2842	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Caul_2842	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Caul_2842	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Caul_2842	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Caul_2850	PWY-6938	NADH repair
Caul_2853	PWY-381	nitrate reduction II (assimilatory)
Caul_2853	PWY-5675	nitrate reduction V (assimilatory)
Caul_2853	PWY-6549	L-glutamine biosynthesis III
Caul_2853	PWY-6963	ammonia assimilation cycle I
Caul_2853	PWY-6964	ammonia assimilation cycle II
Caul_2861	PWY-1361	benzoyl-CoA degradation I (aerobic)
Caul_2861	PWY-5109	2-methylbutanoate biosynthesis
Caul_2861	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Caul_2861	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Caul_2861	PWY-5177	glutaryl-CoA degradation
Caul_2861	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_2861	PWY-6435	4-hydroxybenzoate biosynthesis V
Caul_2861	PWY-6583	pyruvate fermentation to butanol I
Caul_2861	PWY-6863	pyruvate fermentation to hexanol
Caul_2861	PWY-6883	pyruvate fermentation to butanol II
Caul_2861	PWY-6944	androstenedione degradation
Caul_2861	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Caul_2861	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Caul_2861	PWY-7007	methyl ketone biosynthesis
Caul_2861	PWY-7046	4-coumarate degradation (anaerobic)
Caul_2861	PWY-7094	fatty acid salvage
Caul_2861	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Caul_2861	PWY-735	jasmonic acid biosynthesis
Caul_2861	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Caul_2872	PWY-6854	ethylene biosynthesis III (microbes)
Caul_2875	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Caul_2875	PWY-6578	8-amino-7-oxononanoate biosynthesis III
Caul_2875	PWY-7147	8-amino-7-oxononanoate biosynthesis II
Caul_2876	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Caul_2891	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Caul_2891	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Caul_2904	PWY-4381	fatty acid biosynthesis initiation I
Caul_2917	PWY-4381	fatty acid biosynthesis initiation I
Caul_2925	PWY-5350	thiosulfate disproportionation III (rhodanese)
Caul_2926	PWY-6936	seleno-amino acid biosynthesis
Caul_2953	PWY-5194	siroheme biosynthesis
Caul_2953	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Caul_2956	PWY-6683	sulfate reduction III (assimilatory)
Caul_2960	PWY-4981	L-proline biosynthesis II (from arginine)
Caul_2960	PWY-4984	urea cycle
Caul_2960	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_2962	PWY-43	putrescine biosynthesis II
Caul_2996	PWY-6348	phosphate acquisition
Caul_2996	PWY-6357	phosphate utilization in cell wall regeneration
Caul_2996	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Caul_2996	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Caul_2999	PWY-4381	fatty acid biosynthesis initiation I
Caul_2999	PWY-5743	3-hydroxypropanoate cycle
Caul_2999	PWY-5744	glyoxylate assimilation
Caul_2999	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_2999	PWY-6679	jadomycin biosynthesis
Caul_2999	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_3002	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3002	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3013	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_3014	PWY-5484	glycolysis II (from fructose 6-phosphate)
Caul_3024	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_3024	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_3027	PWY-5491	diethylphosphate degradation
Caul_3033	PWY-4381	fatty acid biosynthesis initiation I
Caul_3043	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Caul_3043	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Caul_3043	PWY-6896	thiamin salvage I
Caul_3043	PWY-6897	thiamin salvage II
Caul_3045	PWY-6167	flavin biosynthesis II (archaea)
Caul_3045	PWY-6168	flavin biosynthesis III (fungi)
Caul_3047	PWY-1622	formaldehyde assimilation I (serine pathway)
Caul_3047	PWY-181	photorespiration
Caul_3047	PWY-2161	folate polyglutamylation
Caul_3047	PWY-2201	folate transformations I
Caul_3047	PWY-3661	glycine betaine degradation I
Caul_3047	PWY-3661-1	glycine betaine degradation II (mammalian)
Caul_3047	PWY-3841	folate transformations II
Caul_3047	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_3049	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Caul_3049	PWY-7536	2-amino-3-hydroxycyclopent-2-enone biosynthesis
Caul_3057	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Caul_3057	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Caul_3059	PWY-3781	aerobic respiration I (cytochrome c)
Caul_3059	PWY-4521	arsenite oxidation I (respiratory)
Caul_3059	PWY-6692	Fe(II) oxidation
Caul_3059	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_3064	PWY-723	alkylnitronates degradation
Caul_3079	PWY-6891	thiazole biosynthesis II (Bacillus)
Caul_3079	PWY-6892	thiazole biosynthesis I (E. coli)
Caul_3079	PWY-7560	methylerythritol phosphate pathway II
Caul_3086	PWY-2941	L-lysine biosynthesis II
Caul_3086	PWY-2942	L-lysine biosynthesis III
Caul_3086	PWY-5097	L-lysine biosynthesis VI
Caul_3114	PWY-5381	pyridine nucleotide cycling (plants)
Caul_3114	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Caul_3114	PWY-6596	adenosine nucleotides degradation I
Caul_3114	PWY-6606	guanosine nucleotides degradation II
Caul_3114	PWY-6607	guanosine nucleotides degradation I
Caul_3114	PWY-6608	guanosine nucleotides degradation III
Caul_3114	PWY-7185	UTP and CTP dephosphorylation I
Caul_3115	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Caul_3131	PWY-5101	L-isoleucine biosynthesis II
Caul_3131	PWY-5103	L-isoleucine biosynthesis III
Caul_3131	PWY-5104	L-isoleucine biosynthesis IV
Caul_3131	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_3154	PWY-4381	fatty acid biosynthesis initiation I
Caul_3154	PWY-5743	3-hydroxypropanoate cycle
Caul_3154	PWY-5744	glyoxylate assimilation
Caul_3154	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_3154	PWY-6679	jadomycin biosynthesis
Caul_3154	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_3161	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Caul_3161	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Caul_3175	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Caul_3181	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3181	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3184	PWY-7183	pyrimidine nucleobases salvage I
Caul_3189	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_3211	PWY-4983	L-citrulline-nitric oxide cycle
Caul_3211	PWY-4984	urea cycle
Caul_3211	PWY-5	canavanine biosynthesis
Caul_3211	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_3211	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_3213	PWY-2941	L-lysine biosynthesis II
Caul_3213	PWY-2942	L-lysine biosynthesis III
Caul_3213	PWY-5097	L-lysine biosynthesis VI
Caul_3227	PWY-3461	L-tyrosine biosynthesis II
Caul_3227	PWY-3462	L-phenylalanine biosynthesis II
Caul_3227	PWY-6120	L-tyrosine biosynthesis III
Caul_3227	PWY-6627	salinosporamide A biosynthesis
Caul_3240	PWY-4381	fatty acid biosynthesis initiation I
Caul_3245	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Caul_3245	PWY-7494	choline degradation IV
Caul_3251	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Caul_3267	PWY-6683	sulfate reduction III (assimilatory)
Caul_3269	PWY-5194	siroheme biosynthesis
Caul_3269	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Caul_3271	PWY-3461	L-tyrosine biosynthesis II
Caul_3271	PWY-3462	L-phenylalanine biosynthesis II
Caul_3271	PWY-6120	L-tyrosine biosynthesis III
Caul_3271	PWY-6406	salicylate biosynthesis I
Caul_3271	PWY-6627	salinosporamide A biosynthesis
Caul_3314	PWY-6891	thiazole biosynthesis II (Bacillus)
Caul_3314	PWY-6892	thiazole biosynthesis I (E. coli)
Caul_3314	PWY-7560	methylerythritol phosphate pathway II
Caul_3349	PWY-2781	<i>cis</i>-zeatin biosynthesis
Caul_3351	PWY-5101	L-isoleucine biosynthesis II
Caul_3351	PWY-5103	L-isoleucine biosynthesis III
Caul_3351	PWY-5104	L-isoleucine biosynthesis IV
Caul_3351	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Caul_3351	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Caul_3351	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Caul_3351	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_3353	PWY-5101	L-isoleucine biosynthesis II
Caul_3353	PWY-5103	L-isoleucine biosynthesis III
Caul_3353	PWY-5104	L-isoleucine biosynthesis IV
Caul_3353	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Caul_3353	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Caul_3353	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Caul_3353	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_3367	PWY-5392	reductive TCA cycle II
Caul_3367	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Caul_3367	PWY-5690	TCA cycle II (plants and fungi)
Caul_3367	PWY-5913	TCA cycle VI (obligate autotrophs)
Caul_3367	PWY-6728	methylaspartate cycle
Caul_3367	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Caul_3367	PWY-7254	TCA cycle VII (acetate-producers)
Caul_3367	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Caul_3381	PWY-5101	L-isoleucine biosynthesis II
Caul_3381	PWY-5103	L-isoleucine biosynthesis III
Caul_3381	PWY-5104	L-isoleucine biosynthesis IV
Caul_3381	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_3385	PWY-3841	folate transformations II
Caul_3385	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_3385	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_3385	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Caul_3385	PWY-7199	pyrimidine deoxyribonucleosides salvage
Caul_3385	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Caul_3387	PWY-3841	folate transformations II
Caul_3387	PWY-6614	tetrahydrofolate biosynthesis
Caul_3397	PWY-3121	linamarin degradation
Caul_3397	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Caul_3397	PWY-6002	lotaustralin degradation
Caul_3397	PWY-6788	cellulose degradation II (fungi)
Caul_3397	PWY-7089	taxiphyllin bioactivation
Caul_3397	PWY-7091	linustatin bioactivation
Caul_3397	PWY-7092	neolinustatin bioactivation
Caul_3402	PWY-2201	folate transformations I
Caul_3402	PWY-3841	folate transformations II
Caul_3404	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3404	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3409	PWY-2201	folate transformations I
Caul_3409	PWY-3841	folate transformations II
Caul_3420	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Caul_3439	PWY-6123	inosine-5'-phosphate biosynthesis I
Caul_3439	PWY-6124	inosine-5'-phosphate biosynthesis II
Caul_3439	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Caul_3439	PWY-7234	inosine-5'-phosphate biosynthesis III
Caul_3443	PWY-6123	inosine-5'-phosphate biosynthesis I
Caul_3443	PWY-6124	inosine-5'-phosphate biosynthesis II
Caul_3443	PWY-7234	inosine-5'-phosphate biosynthesis III
Caul_3444	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Caul_3444	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Caul_3444	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Caul_3449	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Caul_3449	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Caul_3449	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Caul_3455	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Caul_3455	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Caul_3455	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Caul_3515	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Caul_3517	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Caul_3517	PWY-3162	L-tryptophan degradation V (side chain pathway)
Caul_3517	PWY-5057	L-valine degradation II
Caul_3517	PWY-5076	L-leucine degradation III
Caul_3517	PWY-5078	L-isoleucine degradation II
Caul_3517	PWY-5079	L-phenylalanine degradation III
Caul_3517	PWY-5082	L-methionine degradation III
Caul_3517	PWY-5480	pyruvate fermentation to ethanol I
Caul_3517	PWY-5486	pyruvate fermentation to ethanol II
Caul_3517	PWY-5751	phenylethanol biosynthesis
Caul_3517	PWY-6028	acetoin degradation
Caul_3517	PWY-6313	serotonin degradation
Caul_3517	PWY-6333	acetaldehyde biosynthesis I
Caul_3517	PWY-6342	noradrenaline and adrenaline degradation
Caul_3517	PWY-6587	pyruvate fermentation to ethanol III
Caul_3517	PWY-6802	salidroside biosynthesis
Caul_3517	PWY-6871	3-methylbutanol biosynthesis
Caul_3517	PWY-7013	L-1,2-propanediol degradation
Caul_3517	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_3517	PWY-7118	chitin degradation to ethanol
Caul_3517	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Caul_3517	PWY-7557	dehydrodiconiferyl alcohol degradation
Caul_3527	PWY-5913	TCA cycle VI (obligate autotrophs)
Caul_3527	PWY-6549	L-glutamine biosynthesis III
Caul_3527	PWY-6728	methylaspartate cycle
Caul_3527	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Caul_3527	PWY-7124	ethylene biosynthesis V (engineered)
Caul_3527	PWY-7254	TCA cycle VII (acetate-producers)
Caul_3527	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Caul_3536	PWY-5155	&beta;-alanine biosynthesis III
Caul_3542	PWY-6164	3-dehydroquinate biosynthesis I
Caul_3544	PWY-4081	glutathione redox reactions I
Caul_3545	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Caul_3545	PWY-5723	Rubisco shunt
Caul_3546	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Caul_3547	PWY-181	photorespiration
Caul_3602	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3602	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3611	PWY-5941	glycogen degradation II (eukaryotic)
Caul_3611	PWY-6724	starch degradation II
Caul_3611	PWY-6737	starch degradation V
Caul_3611	PWY-7238	sucrose biosynthesis II
Caul_3613	PWY-5101	L-isoleucine biosynthesis II
Caul_3613	PWY-5103	L-isoleucine biosynthesis III
Caul_3613	PWY-5104	L-isoleucine biosynthesis IV
Caul_3613	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_3618	PWY-2723	trehalose degradation V
Caul_3618	PWY-6317	galactose degradation I (Leloir pathway)
Caul_3618	PWY-6737	starch degradation V
Caul_3620	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Caul_3628	PWY-723	alkylnitronates degradation
Caul_3629	PWY-5743	3-hydroxypropanoate cycle
Caul_3629	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_3629	PWY-6728	methylaspartate cycle
Caul_3629	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Caul_3630	PWY-5743	3-hydroxypropanoate cycle
Caul_3630	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_3630	PWY-6728	methylaspartate cycle
Caul_3630	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Caul_3660	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3660	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3662	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3662	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3663	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3663	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3666	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Caul_3666	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Caul_3666	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Caul_3666	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Caul_3669	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3669	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3670	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Caul_3670	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Caul_3670	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Caul_3671	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_3671	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_3686	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Caul_3686	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Caul_3706	PWY-6832	2-aminoethylphosphonate degradation II
Caul_3708	PWY-5691	urate degradation to allantoin I
Caul_3708	PWY-7394	urate degradation to allantoin II
Caul_3713	PWY-5169	cyanurate degradation
Caul_3713	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Caul_3717	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_3717	PWY-6606	guanosine nucleotides degradation II
Caul_3717	PWY-6608	guanosine nucleotides degradation III
Caul_3717	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Caul_3719	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_3719	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Caul_3719	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Caul_3719	PWY-6596	adenosine nucleotides degradation I
Caul_3719	PWY-6606	guanosine nucleotides degradation II
Caul_3719	PWY-6607	guanosine nucleotides degradation I
Caul_3719	PWY-6608	guanosine nucleotides degradation III
Caul_3719	PWY-6999	theophylline degradation
Caul_3720	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_3720	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Caul_3720	PWY-6538	caffeine degradation III (bacteria, via demethylation)
Caul_3720	PWY-6596	adenosine nucleotides degradation I
Caul_3720	PWY-6606	guanosine nucleotides degradation II
Caul_3720	PWY-6607	guanosine nucleotides degradation I
Caul_3720	PWY-6608	guanosine nucleotides degradation III
Caul_3720	PWY-6999	theophylline degradation
Caul_3721	PWY-5691	urate degradation to allantoin I
Caul_3721	PWY-7394	urate degradation to allantoin II
Caul_3722	PWY-1281	sulfoacetaldehyde degradation I
Caul_3722	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Caul_3722	PWY-5482	pyruvate fermentation to acetate II
Caul_3722	PWY-5485	pyruvate fermentation to acetate IV
Caul_3722	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_3722	PWY-6637	sulfolactate degradation II
Caul_3722	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Caul_3744	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
Caul_3744	PWY-7494	choline degradation IV
Caul_3752	PWY-6936	seleno-amino acid biosynthesis
Caul_3752	PWY-7274	D-cycloserine biosynthesis
Caul_3756	PWY-6700	queuosine biosynthesis
Caul_3763	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Caul_3763	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Caul_3785	PWY-5530	sorbitol biosynthesis II
Caul_3846	PWY-6215	4-chlorobenzoate degradation
Caul_3853	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
Caul_3856	PWY-6823	molybdenum cofactor biosynthesis
Caul_3858	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Caul_3858	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_3858	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Caul_3858	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Caul_3858	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_3858	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_3858	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_3858	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Caul_3860	PWY-6823	molybdenum cofactor biosynthesis
Caul_3871	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Caul_3871	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_3871	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Caul_3871	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Caul_3875	PWY-7533	gliotoxin biosynthesis
Caul_3944	PWY-381	nitrate reduction II (assimilatory)
Caul_3944	PWY-5675	nitrate reduction V (assimilatory)
Caul_3944	PWY-6549	L-glutamine biosynthesis III
Caul_3944	PWY-6963	ammonia assimilation cycle I
Caul_3944	PWY-6964	ammonia assimilation cycle II
Caul_3952	PWY-381	nitrate reduction II (assimilatory)
Caul_3952	PWY-5675	nitrate reduction V (assimilatory)
Caul_3952	PWY-6549	L-glutamine biosynthesis III
Caul_3952	PWY-6963	ammonia assimilation cycle I
Caul_3952	PWY-6964	ammonia assimilation cycle II
Caul_3961	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Caul_4003	PWY-5101	L-isoleucine biosynthesis II
Caul_4003	PWY-5103	L-isoleucine biosynthesis III
Caul_4003	PWY-5104	L-isoleucine biosynthesis IV
Caul_4003	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Caul_4036	PWY-1361	benzoyl-CoA degradation I (aerobic)
Caul_4036	PWY-5109	2-methylbutanoate biosynthesis
Caul_4036	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Caul_4036	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Caul_4036	PWY-5177	glutaryl-CoA degradation
Caul_4036	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_4036	PWY-6435	4-hydroxybenzoate biosynthesis V
Caul_4036	PWY-6583	pyruvate fermentation to butanol I
Caul_4036	PWY-6863	pyruvate fermentation to hexanol
Caul_4036	PWY-6883	pyruvate fermentation to butanol II
Caul_4036	PWY-6944	androstenedione degradation
Caul_4036	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Caul_4036	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Caul_4036	PWY-7007	methyl ketone biosynthesis
Caul_4036	PWY-7046	4-coumarate degradation (anaerobic)
Caul_4036	PWY-7094	fatty acid salvage
Caul_4036	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Caul_4036	PWY-735	jasmonic acid biosynthesis
Caul_4036	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Caul_4052	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Caul_4052	PWY-6167	flavin biosynthesis II (archaea)
Caul_4052	PWY-6168	flavin biosynthesis III (fungi)
Caul_4064	PWY-5663	tetrahydrobiopterin biosynthesis I
Caul_4064	PWY-5664	tetrahydrobiopterin biosynthesis II
Caul_4064	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Caul_4064	PWY-6703	preQ<sub>0</sub> biosynthesis
Caul_4064	PWY-6983	tetrahydrobiopterin biosynthesis III
Caul_4064	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Caul_4072	PWY-2941	L-lysine biosynthesis II
Caul_4072	PWY-2942	L-lysine biosynthesis III
Caul_4072	PWY-5097	L-lysine biosynthesis VI
Caul_4072	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_4072	PWY-6559	spermidine biosynthesis II
Caul_4072	PWY-6562	norspermidine biosynthesis
Caul_4072	PWY-7153	grixazone biosynthesis
Caul_4072	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_4083	PWY-6807	xyloglucan degradation II (exoglucanase)
Caul_4084	PWY-5057	L-valine degradation II
Caul_4084	PWY-5076	L-leucine degradation III
Caul_4084	PWY-5078	L-isoleucine degradation II
Caul_4084	PWY-5101	L-isoleucine biosynthesis II
Caul_4084	PWY-5103	L-isoleucine biosynthesis III
Caul_4084	PWY-5104	L-isoleucine biosynthesis IV
Caul_4084	PWY-5108	L-isoleucine biosynthesis V
Caul_4086	PWY-5767	Caul_4086
Caul_4111	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Caul_4144	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Caul_4201	PWY-5958	acridone alkaloid biosynthesis
Caul_4201	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Caul_4201	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Caul_4281	PWY-5269	cardiolipin biosynthesis II
Caul_4281	PWY-5668	cardiolipin biosynthesis I
Caul_4285	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_4285	PWY-5686	UMP biosynthesis
Caul_4285	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_4298	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Caul_4298	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Caul_4303	PWY-6143	CMP-pseudaminate biosynthesis
Caul_4308	PWY-5316	nicotine biosynthesis
Caul_4308	PWY-7342	superpathway of nicotine biosynthesis
Caul_4311	PWY-5316	nicotine biosynthesis
Caul_4311	PWY-5381	pyridine nucleotide cycling (plants)
Caul_4311	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Caul_4311	PWY-7342	superpathway of nicotine biosynthesis
Caul_4328	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_4328	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_4332	PWY-6785	hydrogen production VIII
Caul_4345	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Caul_4345	PWY-6148	tetrahydromethanopterin biosynthesis
Caul_4345	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Caul_4345	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Caul_4357	PWY-5686	UMP biosynthesis
Caul_4391	PWY-7560	methylerythritol phosphate pathway II
Caul_4394	PWY-702	L-methionine biosynthesis II
Caul_4402	PWY-5350	thiosulfate disproportionation III (rhodanese)
Caul_4414	PWY-723	alkylnitronates degradation
Caul_4421	PWY-6614	tetrahydrofolate biosynthesis
Caul_4441	PWY-6562	norspermidine biosynthesis
Caul_4449	PWY-5169	cyanurate degradation
Caul_4449	PWY-5703	urea degradation I
Caul_4450	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Caul_4455	PWY-6823	molybdenum cofactor biosynthesis
Caul_4464	PWY-4381	fatty acid biosynthesis initiation I
Caul_4464	PWY-5743	3-hydroxypropanoate cycle
Caul_4464	PWY-5744	glyoxylate assimilation
Caul_4464	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_4464	PWY-6679	jadomycin biosynthesis
Caul_4464	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_4475	PWY-6910	hydroxymethylpyrimidine salvage
Caul_4475	PWY-7356	thiamin salvage IV (yeast)
Caul_4475	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Caul_4478	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_4478	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_4505	PWY-3781	aerobic respiration I (cytochrome c)
Caul_4505	PWY-4521	arsenite oxidation I (respiratory)
Caul_4505	PWY-6692	Fe(II) oxidation
Caul_4505	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_4514	PWY-5676	acetyl-CoA fermentation to butanoate II
Caul_4514	PWY-5741	ethylmalonyl-CoA pathway
Caul_4514	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Caul_4530	PWY-5663	tetrahydrobiopterin biosynthesis I
Caul_4530	PWY-5664	tetrahydrobiopterin biosynthesis II
Caul_4530	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Caul_4530	PWY-6703	preQ<sub>0</sub> biosynthesis
Caul_4530	PWY-6983	tetrahydrobiopterin biosynthesis III
Caul_4530	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Caul_4533	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_4533	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_4544	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Caul_4544	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Caul_4544	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Caul_4558	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_4558	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_4576	PWY-5381	pyridine nucleotide cycling (plants)
Caul_4580	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Caul_4581	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Caul_4581	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Caul_4585	PWY-5988	wound-induced proteolysis I
Caul_4585	PWY-6018	seed germination protein turnover
Caul_4597	PWY-6749	CMP-legionaminate biosynthesis I
Caul_4598	PWY-6749	CMP-legionaminate biosynthesis I
Caul_4605	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Caul_4618	PWY-2941	L-lysine biosynthesis II
Caul_4618	PWY-2942	L-lysine biosynthesis III
Caul_4618	PWY-5097	L-lysine biosynthesis VI
Caul_4618	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_4618	PWY-6559	spermidine biosynthesis II
Caul_4618	PWY-6562	norspermidine biosynthesis
Caul_4618	PWY-7153	grixazone biosynthesis
Caul_4618	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_4622	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Caul_4622	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Caul_4623	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Caul_4625	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Caul_4634	PWY-6143	CMP-pseudaminate biosynthesis
Caul_4634	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
Caul_4634	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
Caul_4634	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
Caul_4648	PWY-7158	L-phenylalanine degradation V
Caul_4661	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Caul_4661	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_4661	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Caul_4661	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Caul_4661	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_4661	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_4661	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_4661	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Caul_4688	PWY-3801	sucrose degradation II (sucrose synthase)
Caul_4688	PWY-5054	sorbitol biosynthesis I
Caul_4688	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Caul_4688	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Caul_4688	PWY-5659	GDP-mannose biosynthesis
Caul_4688	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Caul_4688	PWY-621	sucrose degradation III (sucrose invertase)
Caul_4688	PWY-622	starch biosynthesis
Caul_4688	PWY-6531	mannitol cycle
Caul_4688	PWY-6981	chitin biosynthesis
Caul_4688	PWY-7238	sucrose biosynthesis II
Caul_4688	PWY-7347	sucrose biosynthesis III
Caul_4688	PWY-7385	1,3-propanediol biosynthesis (engineered)
Caul_4695	PWY-6348	phosphate acquisition
Caul_4695	PWY-6357	phosphate utilization in cell wall regeneration
Caul_4695	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Caul_4695	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Caul_4696	PWY-43	putrescine biosynthesis II
Caul_4697	PWY-43	putrescine biosynthesis II
Caul_4704	PWY-6617	adenosine nucleotides degradation III
Caul_4708	PWY-6654	phosphopantothenate biosynthesis III
Caul_4709	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Caul_4709	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_4709	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Caul_4709	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Caul_4709	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_4709	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_4709	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_4709	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Caul_4718	PWY-5381	pyridine nucleotide cycling (plants)
Caul_4718	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Caul_4737	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Caul_4740	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Caul_4757	PWY-6936	seleno-amino acid biosynthesis
Caul_4763	PWY-4983	L-citrulline-nitric oxide cycle
Caul_4763	PWY-4984	urea cycle
Caul_4763	PWY-5	canavanine biosynthesis
Caul_4763	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_4763	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Caul_4774	PWY-5686	UMP biosynthesis
Caul_4778	PWY-3781	aerobic respiration I (cytochrome c)
Caul_4778	PWY-4521	arsenite oxidation I (respiratory)
Caul_4778	PWY-6692	Fe(II) oxidation
Caul_4778	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_4780	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Caul_4780	PWY-5723	Rubisco shunt
Caul_4782	PWY-6123	inosine-5'-phosphate biosynthesis I
Caul_4782	PWY-6124	inosine-5'-phosphate biosynthesis II
Caul_4782	PWY-7234	inosine-5'-phosphate biosynthesis III
Caul_4787	PWY-5022	4-aminobutanoate degradation V
Caul_4787	PWY-6728	methylaspartate cycle
Caul_4787	PWY-7126	ethylene biosynthesis IV
Caul_4797	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_4797	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_4824	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Caul_4837	PWY-3781	aerobic respiration I (cytochrome c)
Caul_4837	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Caul_4837	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Caul_4837	PWY-5690	TCA cycle II (plants and fungi)
Caul_4837	PWY-6728	methylaspartate cycle
Caul_4837	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Caul_4837	PWY-7254	TCA cycle VII (acetate-producers)
Caul_4837	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_4838	PWY-3781	aerobic respiration I (cytochrome c)
Caul_4838	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Caul_4838	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Caul_4838	PWY-5690	TCA cycle II (plants and fungi)
Caul_4838	PWY-6728	methylaspartate cycle
Caul_4838	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Caul_4838	PWY-7254	TCA cycle VII (acetate-producers)
Caul_4838	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Caul_4864	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
Caul_4868	PWY-2941	L-lysine biosynthesis II
Caul_4868	PWY-5097	L-lysine biosynthesis VI
Caul_4875	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Caul_4875	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Caul_4909	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Caul_4909	PWY-5723	Rubisco shunt
Caul_4910	PWY-3221	dTDP-L-rhamnose biosynthesis II
Caul_4910	PWY-6808	dTDP-D-forosamine biosynthesis
Caul_4910	PWY-6942	dTDP-D-desosamine biosynthesis
Caul_4910	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Caul_4910	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Caul_4910	PWY-6974	dTDP-L-olivose biosynthesis
Caul_4910	PWY-6976	dTDP-L-mycarose biosynthesis
Caul_4910	PWY-7104	dTDP-L-megosamine biosynthesis
Caul_4910	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Caul_4910	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Caul_4910	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Caul_4910	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Caul_4910	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Caul_4910	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Caul_4910	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Caul_4910	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Caul_4912	PWY-3221	dTDP-L-rhamnose biosynthesis II
Caul_4912	PWY-6808	dTDP-D-forosamine biosynthesis
Caul_4912	PWY-6942	dTDP-D-desosamine biosynthesis
Caul_4912	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Caul_4912	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Caul_4912	PWY-6974	dTDP-L-olivose biosynthesis
Caul_4912	PWY-6976	dTDP-L-mycarose biosynthesis
Caul_4912	PWY-7104	dTDP-L-megosamine biosynthesis
Caul_4912	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Caul_4912	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Caul_4912	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Caul_4912	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Caul_4912	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Caul_4912	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Caul_4912	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Caul_4912	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Caul_4913	PWY-5659	GDP-mannose biosynthesis
Caul_4913	PWY-6073	alginate biosynthesis I (algal)
Caul_4913	PWY-6082	alginate biosynthesis II (bacterial)
Caul_4913	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Caul_4914	PWY-5381	pyridine nucleotide cycling (plants)
Caul_4914	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Caul_4915	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Caul_4915	PWY-5723	Rubisco shunt
Caul_4915	PWY-6891	thiazole biosynthesis II (Bacillus)
Caul_4915	PWY-6892	thiazole biosynthesis I (E. coli)
Caul_4915	PWY-6901	superpathway of glucose and xylose degradation
Caul_4915	PWY-7560	methylerythritol phosphate pathway II
Caul_4918	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Caul_4922	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Caul_4939	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Caul_4967	PWY-2941	L-lysine biosynthesis II
Caul_4967	PWY-2942	L-lysine biosynthesis III
Caul_4967	PWY-5097	L-lysine biosynthesis VI
Caul_4968	PWY-1281	sulfoacetaldehyde degradation I
Caul_4968	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Caul_4968	PWY-5482	pyruvate fermentation to acetate II
Caul_4968	PWY-5485	pyruvate fermentation to acetate IV
Caul_4968	PWY-5497	purine nucleobases degradation II (anaerobic)
Caul_4968	PWY-6637	sulfolactate degradation II
Caul_4968	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Caul_4974	PWY-2723	trehalose degradation V
Caul_4974	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Caul_4974	PWY-5661	GDP-glucose biosynthesis
Caul_4974	PWY-7238	sucrose biosynthesis II
Caul_4974	PWY-7385	1,3-propanediol biosynthesis (engineered)
Caul_4978	PWY-4381	fatty acid biosynthesis initiation I
Caul_4978	PWY-5743	3-hydroxypropanoate cycle
Caul_4978	PWY-5744	glyoxylate assimilation
Caul_4978	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Caul_4978	PWY-6679	jadomycin biosynthesis
Caul_4978	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_4979	PWY-2161	folate polyglutamylation
Caul_5003	PWY-5741	ethylmalonyl-CoA pathway
Caul_5003	PWY-5744	glyoxylate assimilation
Caul_5003	PWY-6728	methylaspartate cycle
Caul_5004	PWY-1622	formaldehyde assimilation I (serine pathway)
Caul_5004	PWY-5392	reductive TCA cycle II
Caul_5004	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Caul_5004	PWY-5690	TCA cycle II (plants and fungi)
Caul_5004	PWY-5913	TCA cycle VI (obligate autotrophs)
Caul_5004	PWY-6728	methylaspartate cycle
Caul_5004	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Caul_5004	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Caul_5004	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Caul_5013	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Caul_5016	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Caul_5016	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Caul_5019	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Caul_5033	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Caul_5033	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Caul_5033	PWY-6897	thiamin salvage II
Caul_5033	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Caul_5033	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Caul_5033	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Caul_5033	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Caul_5034	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Caul_5060	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Caul_5060	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Caul_5060	PWY-5989	stearate biosynthesis II (bacteria and plants)
Caul_5060	PWY-5994	palmitate biosynthesis I (animals and fungi)
Caul_5060	PWY-6113	superpathway of mycolate biosynthesis
Caul_5060	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Caul_5060	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Caul_5060	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Caul_5060	PWYG-321	mycolate biosynthesis
Caul_5064	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Caul_5064	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Caul_5064	PWY-5989	stearate biosynthesis II (bacteria and plants)
Caul_5064	PWY-6113	superpathway of mycolate biosynthesis
Caul_5064	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Caul_5064	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Caul_5064	PWY-7096	triclosan resistance
Caul_5064	PWYG-321	mycolate biosynthesis
Caul_5069	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Caul_5069	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Caul_5069	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Caul_5069	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Caul_5074	PWY-5839	menaquinol-7 biosynthesis
Caul_5074	PWY-5844	menaquinol-9 biosynthesis
Caul_5074	PWY-5849	menaquinol-6 biosynthesis
Caul_5074	PWY-5890	menaquinol-10 biosynthesis
Caul_5074	PWY-5891	menaquinol-11 biosynthesis
Caul_5074	PWY-5892	menaquinol-12 biosynthesis
Caul_5074	PWY-5895	menaquinol-13 biosynthesis