Cpin_0006	PWY-5491	diethylphosphate degradation
Cpin_0022	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_0031	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cpin_0031	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cpin_0061	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_0086	PWY-6986	alginate degradation
Cpin_0106	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_0111	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_0111	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_0134	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_0173	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_0181	PWY-3221	dTDP-L-rhamnose biosynthesis II
Cpin_0181	PWY-6808	dTDP-D-forosamine biosynthesis
Cpin_0181	PWY-6942	dTDP-D-desosamine biosynthesis
Cpin_0181	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Cpin_0181	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Cpin_0181	PWY-6974	dTDP-L-olivose biosynthesis
Cpin_0181	PWY-6976	dTDP-L-mycarose biosynthesis
Cpin_0181	PWY-7104	dTDP-L-megosamine biosynthesis
Cpin_0181	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Cpin_0181	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Cpin_0181	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Cpin_0181	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Cpin_0181	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Cpin_0181	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Cpin_0181	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Cpin_0181	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Cpin_0182	PWY-3821	galactose degradation III
Cpin_0182	PWY-6317	galactose degradation I (Leloir pathway)
Cpin_0182	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cpin_0182	PWY-6527	stachyose degradation
Cpin_0182	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cpin_0182	PWY-7344	UDP-D-galactose biosynthesis
Cpin_0195	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cpin_0195	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cpin_0195	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cpin_0201	PWY-6823	molybdenum cofactor biosynthesis
Cpin_0203	PWY-5964	guanylyl molybdenum cofactor biosynthesis
Cpin_0207	PWY-6823	molybdenum cofactor biosynthesis
Cpin_0216	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Cpin_0217	PWY-5381	pyridine nucleotide cycling (plants)
Cpin_0217	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Cpin_0227	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_0227	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_0228	PWY-5743	3-hydroxypropanoate cycle
Cpin_0228	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_0228	PWY-6728	methylaspartate cycle
Cpin_0228	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cpin_0229	PWY-6823	molybdenum cofactor biosynthesis
Cpin_0229	PWY-6891	thiazole biosynthesis II (Bacillus)
Cpin_0229	PWY-6892	thiazole biosynthesis I (E. coli)
Cpin_0229	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cpin_0233	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_0233	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_0233	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cpin_0238	PWY-5392	reductive TCA cycle II
Cpin_0238	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cpin_0238	PWY-5690	TCA cycle II (plants and fungi)
Cpin_0238	PWY-5913	TCA cycle VI (obligate autotrophs)
Cpin_0238	PWY-6728	methylaspartate cycle
Cpin_0238	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cpin_0238	PWY-7254	TCA cycle VII (acetate-producers)
Cpin_0238	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cpin_0242	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cpin_0243	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cpin_0264	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cpin_0264	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cpin_0313	PWY-5674	nitrate reduction IV (dissimilatory)
Cpin_0373	PWY-6349	CDP-archaeol biosynthesis
Cpin_0376	PWY-6891	thiazole biosynthesis II (Bacillus)
Cpin_0376	PWY-6892	thiazole biosynthesis I (E. coli)
Cpin_0376	PWY-7560	methylerythritol phosphate pathway II
Cpin_0390	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cpin_0390	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cpin_0390	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cpin_0391	PWY-6891	thiazole biosynthesis II (Bacillus)
Cpin_0391	PWY-6892	thiazole biosynthesis I (E. coli)
Cpin_0391	PWY-7560	methylerythritol phosphate pathway II
Cpin_0420	PWY-7039	phosphatidate metabolism, as a signaling molecule
Cpin_0468	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cpin_0468	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cpin_0473	PWY-5316	nicotine biosynthesis
Cpin_0473	PWY-5381	pyridine nucleotide cycling (plants)
Cpin_0473	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Cpin_0473	PWY-7342	superpathway of nicotine biosynthesis
Cpin_0475	PWY-1042	glycolysis IV (plant cytosol)
Cpin_0475	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cpin_0475	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_0475	PWY-5723	Rubisco shunt
Cpin_0475	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_0475	PWY-6886	1-butanol autotrophic biosynthesis
Cpin_0475	PWY-6901	superpathway of glucose and xylose degradation
Cpin_0475	PWY-7003	glycerol degradation to butanol
Cpin_0475	PWY-7124	ethylene biosynthesis V (engineered)
Cpin_0475	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Cpin_0486	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cpin_0486	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cpin_0489	PWY-2723	trehalose degradation V
Cpin_0489	PWY-6317	galactose degradation I (Leloir pathway)
Cpin_0489	PWY-6737	starch degradation V
Cpin_0492	PWY-6012	acyl carrier protein metabolism I
Cpin_0522	PWY-3781	aerobic respiration I (cytochrome c)
Cpin_0522	PWY-4521	arsenite oxidation I (respiratory)
Cpin_0522	PWY-6692	Fe(II) oxidation
Cpin_0522	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cpin_0530	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cpin_0530	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Cpin_0537	PWY-2941	L-lysine biosynthesis II
Cpin_0537	PWY-2942	L-lysine biosynthesis III
Cpin_0537	PWY-5097	L-lysine biosynthesis VI
Cpin_0537	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cpin_0537	PWY-6559	spermidine biosynthesis II
Cpin_0537	PWY-6562	norspermidine biosynthesis
Cpin_0537	PWY-7153	grixazone biosynthesis
Cpin_0537	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cpin_0563	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Cpin_0607	PWY-5381	pyridine nucleotide cycling (plants)
Cpin_0621	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Cpin_0622	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Cpin_0622	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Cpin_0622	PWY-6897	thiamin salvage II
Cpin_0622	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Cpin_0622	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Cpin_0622	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Cpin_0622	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Cpin_0624	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Cpin_0624	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Cpin_0624	PWY-6897	thiamin salvage II
Cpin_0624	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Cpin_0624	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Cpin_0624	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Cpin_0624	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Cpin_0625	PWY-6891	thiazole biosynthesis II (Bacillus)
Cpin_0625	PWY-6892	thiazole biosynthesis I (E. coli)
Cpin_0626	PWY-6892	thiazole biosynthesis I (E. coli)
Cpin_0626	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Cpin_0636	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cpin_0636	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_0636	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_0636	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Cpin_0636	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cpin_0636	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cpin_0657	PWY-3341	L-proline biosynthesis III
Cpin_0657	PWY-4981	L-proline biosynthesis II (from arginine)
Cpin_0657	PWY-6344	L-ornithine degradation II (Stickland reaction)
Cpin_0665	PWY-5669	phosphatidylethanolamine biosynthesis I
Cpin_0681	PWY-3781	aerobic respiration I (cytochrome c)
Cpin_0681	PWY-4521	arsenite oxidation I (respiratory)
Cpin_0681	PWY-6692	Fe(II) oxidation
Cpin_0681	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cpin_0691	PWY-1361	benzoyl-CoA degradation I (aerobic)
Cpin_0691	PWY-5109	2-methylbutanoate biosynthesis
Cpin_0691	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Cpin_0691	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Cpin_0691	PWY-5177	glutaryl-CoA degradation
Cpin_0691	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_0691	PWY-6435	4-hydroxybenzoate biosynthesis V
Cpin_0691	PWY-6583	pyruvate fermentation to butanol I
Cpin_0691	PWY-6863	pyruvate fermentation to hexanol
Cpin_0691	PWY-6883	pyruvate fermentation to butanol II
Cpin_0691	PWY-6944	androstenedione degradation
Cpin_0691	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Cpin_0691	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Cpin_0691	PWY-7007	methyl ketone biosynthesis
Cpin_0691	PWY-7046	4-coumarate degradation (anaerobic)
Cpin_0691	PWY-7094	fatty acid salvage
Cpin_0691	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Cpin_0691	PWY-735	jasmonic acid biosynthesis
Cpin_0691	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Cpin_0701	PWY-5198	factor 420 biosynthesis
Cpin_0724	PWY-5491	diethylphosphate degradation
Cpin_0727	PWY-4261	glycerol degradation I
Cpin_0728	PWY-4261	glycerol degradation I
Cpin_0728	PWY-6118	glycerol-3-phosphate shuttle
Cpin_0728	PWY-6952	glycerophosphodiester degradation
Cpin_0742	PWY-5316	nicotine biosynthesis
Cpin_0742	PWY-7342	superpathway of nicotine biosynthesis
Cpin_0762	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cpin_0762	PWY-5723	Rubisco shunt
Cpin_0779	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cpin_0779	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_0779	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cpin_0779	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cpin_0791	PWY-5381	pyridine nucleotide cycling (plants)
Cpin_0791	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Cpin_0803	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Cpin_0803	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Cpin_0813	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cpin_0813	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cpin_0818	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Cpin_0820	PWY-4261	glycerol degradation I
Cpin_0838	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_0867	PWY-2201	folate transformations I
Cpin_0867	PWY-3841	folate transformations II
Cpin_0870	PWY-5367	petroselinate biosynthesis
Cpin_0870	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cpin_0870	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cpin_0870	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cpin_0870	PWY-5994	palmitate biosynthesis I (animals and fungi)
Cpin_0870	PWY-6113	superpathway of mycolate biosynthesis
Cpin_0870	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cpin_0870	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cpin_0870	PWY-6951	Cpin_0870
Cpin_0870	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Cpin_0870	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_0870	PWYG-321	mycolate biosynthesis
Cpin_0886	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cpin_0886	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cpin_0891	PWY-2201	folate transformations I
Cpin_0891	PWY-3841	folate transformations II
Cpin_0904	PWY-7560	methylerythritol phosphate pathway II
Cpin_0917	PWY-6672	<i>cis</i>-genanyl-CoA degradation
Cpin_0917	PWY-7118	chitin degradation to ethanol
Cpin_0925	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cpin_0925	PWY-5686	UMP biosynthesis
Cpin_0925	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cpin_0928	PWY-6123	inosine-5'-phosphate biosynthesis I
Cpin_0928	PWY-6124	inosine-5'-phosphate biosynthesis II
Cpin_0928	PWY-7234	inosine-5'-phosphate biosynthesis III
Cpin_0943	PWY-1361	benzoyl-CoA degradation I (aerobic)
Cpin_0943	PWY-5109	2-methylbutanoate biosynthesis
Cpin_0943	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Cpin_0943	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Cpin_0943	PWY-5177	glutaryl-CoA degradation
Cpin_0943	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_0943	PWY-6435	4-hydroxybenzoate biosynthesis V
Cpin_0943	PWY-6583	pyruvate fermentation to butanol I
Cpin_0943	PWY-6863	pyruvate fermentation to hexanol
Cpin_0943	PWY-6883	pyruvate fermentation to butanol II
Cpin_0943	PWY-6944	androstenedione degradation
Cpin_0943	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Cpin_0943	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Cpin_0943	PWY-7007	methyl ketone biosynthesis
Cpin_0943	PWY-7046	4-coumarate degradation (anaerobic)
Cpin_0943	PWY-7094	fatty acid salvage
Cpin_0943	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Cpin_0943	PWY-735	jasmonic acid biosynthesis
Cpin_0943	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Cpin_0950	PWY-5316	nicotine biosynthesis
Cpin_0950	PWY-7342	superpathway of nicotine biosynthesis
Cpin_0966	PWY-5667	CDP-diacylglycerol biosynthesis I
Cpin_0966	PWY-5981	CDP-diacylglycerol biosynthesis III
Cpin_1005	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_1008	PWY-7158	L-phenylalanine degradation V
Cpin_1015	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_1015	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_1016	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_1025	PWY-6906	chitin derivatives degradation
Cpin_1025	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Cpin_1025	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Cpin_1027	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Cpin_1027	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Cpin_1027	PWY-6896	thiamin salvage I
Cpin_1027	PWY-6897	thiamin salvage II
Cpin_1028	PWY-2301	<i>myo</i>-inositol biosynthesis
Cpin_1028	PWY-4702	phytate degradation I
Cpin_1028	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Cpin_1035	PWY-4702	phytate degradation I
Cpin_1049	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cpin_1049	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cpin_1049	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cpin_1061	PWY-6854	ethylene biosynthesis III (microbes)
Cpin_1068	PWY-5743	3-hydroxypropanoate cycle
Cpin_1068	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_1068	PWY-6728	methylaspartate cycle
Cpin_1068	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cpin_1076	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cpin_1076	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cpin_1086	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Cpin_1090	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Cpin_1090	PWY-5739	GDP-D-perosamine biosynthesis
Cpin_1090	PWY-5740	GDP-L-colitose biosynthesis
Cpin_1090	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Cpin_1091	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Cpin_1147	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Cpin_1147	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Cpin_1162	PWY-1042	glycolysis IV (plant cytosol)
Cpin_1162	PWY-1622	formaldehyde assimilation I (serine pathway)
Cpin_1162	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cpin_1162	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_1162	PWY-5723	Rubisco shunt
Cpin_1162	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_1162	PWY-6886	1-butanol autotrophic biosynthesis
Cpin_1162	PWY-6901	superpathway of glucose and xylose degradation
Cpin_1162	PWY-7003	glycerol degradation to butanol
Cpin_1162	PWY-7124	ethylene biosynthesis V (engineered)
Cpin_1162	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Cpin_1184	PWY-7560	methylerythritol phosphate pathway II
Cpin_1185	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cpin_1185	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_1185	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_1185	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Cpin_1198	PWY-6610	adenine and adenosine salvage IV
Cpin_1209	PWY-1281	sulfoacetaldehyde degradation I
Cpin_1209	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cpin_1209	PWY-5482	pyruvate fermentation to acetate II
Cpin_1209	PWY-5485	pyruvate fermentation to acetate IV
Cpin_1209	PWY-5497	purine nucleobases degradation II (anaerobic)
Cpin_1209	PWY-6637	sulfolactate degradation II
Cpin_1209	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cpin_1213	PWY-5392	reductive TCA cycle II
Cpin_1213	PWY-5537	pyruvate fermentation to acetate V
Cpin_1213	PWY-5538	pyruvate fermentation to acetate VI
Cpin_1213	PWY-5690	TCA cycle II (plants and fungi)
Cpin_1213	PWY-5913	TCA cycle VI (obligate autotrophs)
Cpin_1213	PWY-6728	methylaspartate cycle
Cpin_1213	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cpin_1213	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cpin_1233	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_1279	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cpin_1279	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cpin_1279	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cpin_1279	PWY-5994	palmitate biosynthesis I (animals and fungi)
Cpin_1279	PWY-6113	superpathway of mycolate biosynthesis
Cpin_1279	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cpin_1279	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cpin_1279	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_1279	PWYG-321	mycolate biosynthesis
Cpin_1305	PWY-4041	&gamma;-glutamyl cycle
Cpin_1305	PWY-5826	hypoglycin biosynthesis
Cpin_1320	PWY-6854	ethylene biosynthesis III (microbes)
Cpin_1330	PWY-6829	tRNA methylation (yeast)
Cpin_1330	PWY-7285	methylwyosine biosynthesis
Cpin_1330	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Cpin_1333	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Cpin_1397	PWY-1042	glycolysis IV (plant cytosol)
Cpin_1397	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_1397	PWY-6901	superpathway of glucose and xylose degradation
Cpin_1397	PWY-7003	glycerol degradation to butanol
Cpin_1398	PWY-1042	glycolysis IV (plant cytosol)
Cpin_1398	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_1398	PWY-6886	1-butanol autotrophic biosynthesis
Cpin_1398	PWY-6901	superpathway of glucose and xylose degradation
Cpin_1398	PWY-7003	glycerol degradation to butanol
Cpin_1409	PWY-2941	L-lysine biosynthesis II
Cpin_1409	PWY-2942	L-lysine biosynthesis III
Cpin_1409	PWY-5097	L-lysine biosynthesis VI
Cpin_1446	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cpin_1446	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cpin_1446	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cpin_1446	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cpin_1449	PWY-6012	acyl carrier protein metabolism I
Cpin_1449	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cpin_1450	PWY-723	alkylnitronates degradation
Cpin_1466	PWY-3821	galactose degradation III
Cpin_1466	PWY-6317	galactose degradation I (Leloir pathway)
Cpin_1466	PWY-6527	stachyose degradation
Cpin_1467	PWY-6317	galactose degradation I (Leloir pathway)
Cpin_1467	PWY-6527	stachyose degradation
Cpin_1471	PWY-1622	formaldehyde assimilation I (serine pathway)
Cpin_1471	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cpin_1471	PWY-5913	TCA cycle VI (obligate autotrophs)
Cpin_1471	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_1471	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
Cpin_1471	PWY-6549	L-glutamine biosynthesis III
Cpin_1471	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cpin_1471	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cpin_1471	PWY-7124	ethylene biosynthesis V (engineered)
Cpin_1472	PWY-5704	urea degradation II
Cpin_1473	PWY-5704	urea degradation II
Cpin_1474	PWY-5704	urea degradation II
Cpin_1481	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cpin_1482	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cpin_1482	PWY-6855	chitin degradation I (archaea)
Cpin_1482	PWY-6906	chitin derivatives degradation
Cpin_1487	PWY-6902	chitin degradation II
Cpin_1501	PWY-7242	D-fructuronate degradation
Cpin_1506	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cpin_1506	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cpin_1511	PWY-3221	dTDP-L-rhamnose biosynthesis II
Cpin_1511	PWY-6808	dTDP-D-forosamine biosynthesis
Cpin_1511	PWY-6942	dTDP-D-desosamine biosynthesis
Cpin_1511	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Cpin_1511	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Cpin_1511	PWY-6974	dTDP-L-olivose biosynthesis
Cpin_1511	PWY-6976	dTDP-L-mycarose biosynthesis
Cpin_1511	PWY-7104	dTDP-L-megosamine biosynthesis
Cpin_1511	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Cpin_1511	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Cpin_1511	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Cpin_1511	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Cpin_1511	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Cpin_1511	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Cpin_1511	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Cpin_1511	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Cpin_1513	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Cpin_1517	PWY-7199	pyrimidine deoxyribonucleosides salvage
Cpin_1529	PWY-6700	queuosine biosynthesis
Cpin_1530	PWY-7560	methylerythritol phosphate pathway II
Cpin_1573	PWY-6834	spermidine biosynthesis III
Cpin_1602	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Cpin_1604	PWY-5057	L-valine degradation II
Cpin_1604	PWY-5076	L-leucine degradation III
Cpin_1604	PWY-5078	L-isoleucine degradation II
Cpin_1604	PWY-5101	L-isoleucine biosynthesis II
Cpin_1604	PWY-5103	L-isoleucine biosynthesis III
Cpin_1604	PWY-5104	L-isoleucine biosynthesis IV
Cpin_1604	PWY-5108	L-isoleucine biosynthesis V
Cpin_1645	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cpin_1645	PWY-5686	UMP biosynthesis
Cpin_1645	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cpin_1656	PWY-1622	formaldehyde assimilation I (serine pathway)
Cpin_1656	PWY-5392	reductive TCA cycle II
Cpin_1656	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cpin_1656	PWY-5690	TCA cycle II (plants and fungi)
Cpin_1656	PWY-5913	TCA cycle VI (obligate autotrophs)
Cpin_1656	PWY-6728	methylaspartate cycle
Cpin_1656	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cpin_1656	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cpin_1656	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cpin_1662	PWY-381	nitrate reduction II (assimilatory)
Cpin_1662	PWY-5675	nitrate reduction V (assimilatory)
Cpin_1662	PWY-6549	L-glutamine biosynthesis III
Cpin_1662	PWY-6963	ammonia assimilation cycle I
Cpin_1662	PWY-6964	ammonia assimilation cycle II
Cpin_1663	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cpin_1663	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cpin_1663	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cpin_1665	PWY-5491	diethylphosphate degradation
Cpin_1671	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cpin_1679	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cpin_1679	PWY-5723	Rubisco shunt
Cpin_1695	PWY-723	alkylnitronates degradation
Cpin_1696	PWY-6167	flavin biosynthesis II (archaea)
Cpin_1696	PWY-6168	flavin biosynthesis III (fungi)
Cpin_1696	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_1746	PWY-2941	L-lysine biosynthesis II
Cpin_1746	PWY-2942	L-lysine biosynthesis III
Cpin_1746	PWY-5097	L-lysine biosynthesis VI
Cpin_1750	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_1798	PWY-6902	chitin degradation II
Cpin_1810	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_1812	PWY-1081	homogalacturonan degradation
Cpin_1812	PWY-7246	pectin degradation II
Cpin_1812	PWY-7248	pectin degradation III
Cpin_1822	PWY-5958	acridone alkaloid biosynthesis
Cpin_1822	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cpin_1822	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Cpin_1823	PWY-5958	acridone alkaloid biosynthesis
Cpin_1823	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cpin_1823	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Cpin_1838	PWY-3121	linamarin degradation
Cpin_1838	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Cpin_1838	PWY-6002	lotaustralin degradation
Cpin_1838	PWY-6788	cellulose degradation II (fungi)
Cpin_1838	PWY-7089	taxiphyllin bioactivation
Cpin_1838	PWY-7091	linustatin bioactivation
Cpin_1838	PWY-7092	neolinustatin bioactivation
Cpin_1845	PWY-6823	molybdenum cofactor biosynthesis
Cpin_1845	PWY-6891	thiazole biosynthesis II (Bacillus)
Cpin_1845	PWY-6892	thiazole biosynthesis I (E. coli)
Cpin_1845	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cpin_1847	PWY-6749	CMP-legionaminate biosynthesis I
Cpin_1871	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cpin_1871	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cpin_1871	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cpin_1871	PWY-5994	palmitate biosynthesis I (animals and fungi)
Cpin_1871	PWY-6113	superpathway of mycolate biosynthesis
Cpin_1871	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cpin_1871	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cpin_1871	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_1871	PWYG-321	mycolate biosynthesis
Cpin_1876	PWY-6012	acyl carrier protein metabolism I
Cpin_1876	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cpin_1912	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cpin_1912	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cpin_1915	PWY-6788	cellulose degradation II (fungi)
Cpin_1915	PWY-6902	chitin degradation II
Cpin_1919	PWY-5057	L-valine degradation II
Cpin_1919	PWY-5076	L-leucine degradation III
Cpin_1919	PWY-5078	L-isoleucine degradation II
Cpin_1919	PWY-5101	L-isoleucine biosynthesis II
Cpin_1919	PWY-5103	L-isoleucine biosynthesis III
Cpin_1919	PWY-5104	L-isoleucine biosynthesis IV
Cpin_1919	PWY-5108	L-isoleucine biosynthesis V
Cpin_1920	PWY-5101	L-isoleucine biosynthesis II
Cpin_1920	PWY-5103	L-isoleucine biosynthesis III
Cpin_1920	PWY-5104	L-isoleucine biosynthesis IV
Cpin_1920	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cpin_1921	PWY-5101	L-isoleucine biosynthesis II
Cpin_1921	PWY-5103	L-isoleucine biosynthesis III
Cpin_1921	PWY-5104	L-isoleucine biosynthesis IV
Cpin_1921	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Cpin_1921	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Cpin_1921	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Cpin_1921	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cpin_1922	PWY-5101	L-isoleucine biosynthesis II
Cpin_1922	PWY-5103	L-isoleucine biosynthesis III
Cpin_1922	PWY-5104	L-isoleucine biosynthesis IV
Cpin_1922	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Cpin_1922	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Cpin_1922	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Cpin_1922	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cpin_1923	PWY-5101	L-isoleucine biosynthesis II
Cpin_1923	PWY-5103	L-isoleucine biosynthesis III
Cpin_1923	PWY-5104	L-isoleucine biosynthesis IV
Cpin_1923	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cpin_1928	PWY-4261	glycerol degradation I
Cpin_1937	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Cpin_1940	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Cpin_1940	PWY-3461	L-tyrosine biosynthesis II
Cpin_1940	PWY-3462	L-phenylalanine biosynthesis II
Cpin_1940	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Cpin_1940	PWY-6120	L-tyrosine biosynthesis III
Cpin_1940	PWY-6627	salinosporamide A biosynthesis
Cpin_1941	PWY-6164	3-dehydroquinate biosynthesis I
Cpin_1942	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cpin_1943	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cpin_1957	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Cpin_1957	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Cpin_1966	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Cpin_1966	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Cpin_1966	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
Cpin_1974	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cpin_1974	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_1974	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cpin_1974	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cpin_1974	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_1974	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_1974	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_1974	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cpin_1975	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cpin_1975	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_1975	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cpin_1975	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cpin_1975	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_1975	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_1975	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_1975	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cpin_1985	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Cpin_1986	PWY-6871	3-methylbutanol biosynthesis
Cpin_1987	PWY-6454	vancomycin resistance I
Cpin_1987	PWY-6455	vancomycin resistance II
Cpin_2000	PWY-6749	CMP-legionaminate biosynthesis I
Cpin_2004	PWY-6424	Cpin_2004
Cpin_2006	PWY-5028	L-histidine degradation II
Cpin_2006	PWY-5030	L-histidine degradation III
Cpin_2007	PWY-5028	L-histidine degradation II
Cpin_2007	PWY-5030	L-histidine degradation III
Cpin_2008	PWY-5028	L-histidine degradation II
Cpin_2008	PWY-5030	L-histidine degradation III
Cpin_2012	PWY-2201	folate transformations I
Cpin_2012	PWY-5497	purine nucleobases degradation II (anaerobic)
Cpin_2020	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Cpin_2020	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Cpin_2024	PWY-5278	sulfite oxidation III
Cpin_2024	PWY-5340	sulfate activation for sulfonation
Cpin_2024	PWY-6683	sulfate reduction III (assimilatory)
Cpin_2024	PWY-6932	selenate reduction
Cpin_2025	PWY-5278	sulfite oxidation III
Cpin_2025	PWY-5340	sulfate activation for sulfonation
Cpin_2025	PWY-6683	sulfate reduction III (assimilatory)
Cpin_2025	PWY-6932	selenate reduction
Cpin_2028	PWY-2941	L-lysine biosynthesis II
Cpin_2028	PWY-2942	L-lysine biosynthesis III
Cpin_2028	PWY-5097	L-lysine biosynthesis VI
Cpin_2039	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Cpin_2049	PWY-7560	methylerythritol phosphate pathway II
Cpin_2074	PWY-5747	2-methylcitrate cycle II
Cpin_2090	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cpin_2090	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cpin_2090	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cpin_2147	PWY-5988	wound-induced proteolysis I
Cpin_2147	PWY-6018	seed germination protein turnover
Cpin_2160	PWY-5381	pyridine nucleotide cycling (plants)
Cpin_2160	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cpin_2160	PWY-6596	adenosine nucleotides degradation I
Cpin_2160	PWY-6606	guanosine nucleotides degradation II
Cpin_2160	PWY-6607	guanosine nucleotides degradation I
Cpin_2160	PWY-6608	guanosine nucleotides degradation III
Cpin_2160	PWY-7185	UTP and CTP dephosphorylation I
Cpin_2161	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cpin_2161	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cpin_2161	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cpin_2173	PWY-4381	fatty acid biosynthesis initiation I
Cpin_2176	PWY-842	starch degradation I
Cpin_2184	PWY-6902	chitin degradation II
Cpin_2186	PWY-6902	chitin degradation II
Cpin_2224	PWY-1361	benzoyl-CoA degradation I (aerobic)
Cpin_2224	PWY-5109	2-methylbutanoate biosynthesis
Cpin_2224	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Cpin_2224	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Cpin_2224	PWY-5177	glutaryl-CoA degradation
Cpin_2224	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_2224	PWY-6435	4-hydroxybenzoate biosynthesis V
Cpin_2224	PWY-6583	pyruvate fermentation to butanol I
Cpin_2224	PWY-6863	pyruvate fermentation to hexanol
Cpin_2224	PWY-6883	pyruvate fermentation to butanol II
Cpin_2224	PWY-6944	androstenedione degradation
Cpin_2224	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Cpin_2224	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Cpin_2224	PWY-7007	methyl ketone biosynthesis
Cpin_2224	PWY-7046	4-coumarate degradation (anaerobic)
Cpin_2224	PWY-7094	fatty acid salvage
Cpin_2224	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Cpin_2224	PWY-735	jasmonic acid biosynthesis
Cpin_2224	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Cpin_2230	PWY-5686	UMP biosynthesis
Cpin_2275	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_2278	PWY-6655	xanthan biosynthesis
Cpin_2278	PWY-6658	acetan biosynthesis
Cpin_2317	PWY-3961	phosphopantothenate biosynthesis II
Cpin_2321	PWY-1042	glycolysis IV (plant cytosol)
Cpin_2321	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cpin_2321	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_2321	PWY-5723	Rubisco shunt
Cpin_2321	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_2321	PWY-6886	1-butanol autotrophic biosynthesis
Cpin_2321	PWY-6901	superpathway of glucose and xylose degradation
Cpin_2321	PWY-7003	glycerol degradation to butanol
Cpin_2321	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Cpin_2321	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cpin_2322	PWY-1042	glycolysis IV (plant cytosol)
Cpin_2322	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cpin_2322	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_2322	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cpin_2345	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cpin_2345	PWY-6416	quinate degradation II
Cpin_2345	PWY-6707	gallate biosynthesis
Cpin_2348	PWY-4381	fatty acid biosynthesis initiation I
Cpin_2348	PWY-5743	3-hydroxypropanoate cycle
Cpin_2348	PWY-5744	glyoxylate assimilation
Cpin_2348	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_2348	PWY-6679	jadomycin biosynthesis
Cpin_2348	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_2362	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Cpin_2363	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
Cpin_2364	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Cpin_2364	PWY-5739	GDP-D-perosamine biosynthesis
Cpin_2364	PWY-5740	GDP-L-colitose biosynthesis
Cpin_2364	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Cpin_2376	PWY-6655	xanthan biosynthesis
Cpin_2376	PWY-6658	acetan biosynthesis
Cpin_2378	PWY-7254	TCA cycle VII (acetate-producers)
Cpin_2384	PWY-6683	sulfate reduction III (assimilatory)
Cpin_2385	PWY-5194	siroheme biosynthesis
Cpin_2385	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cpin_2389	PWY-5506	methanol oxidation to formaldehyde IV
Cpin_2400	PWY-2301	<i>myo</i>-inositol biosynthesis
Cpin_2400	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
Cpin_2400	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
Cpin_2400	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
Cpin_2400	PWY-6664	di-myo-inositol phosphate biosynthesis
Cpin_2401	PWY-5269	cardiolipin biosynthesis II
Cpin_2401	PWY-5668	cardiolipin biosynthesis I
Cpin_2413	PWY-6902	chitin degradation II
Cpin_2469	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_2573	PWY-2661	trehalose biosynthesis V
Cpin_2574	PWY-2661	trehalose biosynthesis V
Cpin_2605	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_2698	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cpin_2698	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_2698	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cpin_2698	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cpin_2720	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_2734	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_2760	PWY-6986	alginate degradation
Cpin_2838	PWY-6167	flavin biosynthesis II (archaea)
Cpin_2861	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_2873	PWY-6654	phosphopantothenate biosynthesis III
Cpin_3064	PWY-2941	L-lysine biosynthesis II
Cpin_3064	PWY-2942	L-lysine biosynthesis III
Cpin_3064	PWY-5097	L-lysine biosynthesis VI
Cpin_3064	PWY-6559	spermidine biosynthesis II
Cpin_3064	PWY-6562	norspermidine biosynthesis
Cpin_3064	PWY-7153	grixazone biosynthesis
Cpin_3065	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_3070	PWY-2161	folate polyglutamylation
Cpin_3094	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Cpin_3094	PWY-622	starch biosynthesis
Cpin_3114	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Cpin_3115	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
Cpin_3119	PWY-5686	UMP biosynthesis
Cpin_3128	PWY-7456	mannan degradation
Cpin_3129	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_3194	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_3272	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Cpin_3352	PWY-6823	molybdenum cofactor biosynthesis
Cpin_3352	PWY-6891	thiazole biosynthesis II (Bacillus)
Cpin_3352	PWY-6892	thiazole biosynthesis I (E. coli)
Cpin_3352	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cpin_3404	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_3404	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_3405	PWY-5087	L-glutamate degradation VI (to pyruvate)
Cpin_3405	PWY-5103	L-isoleucine biosynthesis III
Cpin_3405	PWY-6728	methylaspartate cycle
Cpin_3411	PWY-1361	benzoyl-CoA degradation I (aerobic)
Cpin_3411	PWY-5109	2-methylbutanoate biosynthesis
Cpin_3411	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Cpin_3411	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Cpin_3411	PWY-5177	glutaryl-CoA degradation
Cpin_3411	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_3411	PWY-6435	4-hydroxybenzoate biosynthesis V
Cpin_3411	PWY-6583	pyruvate fermentation to butanol I
Cpin_3411	PWY-6863	pyruvate fermentation to hexanol
Cpin_3411	PWY-6883	pyruvate fermentation to butanol II
Cpin_3411	PWY-6944	androstenedione degradation
Cpin_3411	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Cpin_3411	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Cpin_3411	PWY-7007	methyl ketone biosynthesis
Cpin_3411	PWY-7046	4-coumarate degradation (anaerobic)
Cpin_3411	PWY-7094	fatty acid salvage
Cpin_3411	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Cpin_3411	PWY-735	jasmonic acid biosynthesis
Cpin_3411	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Cpin_3414	PWY-4381	fatty acid biosynthesis initiation I
Cpin_3417	PWY-4381	fatty acid biosynthesis initiation I
Cpin_3417	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Cpin_3417	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_3423	PWY-6012	acyl carrier protein metabolism I
Cpin_3423	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cpin_3431	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cpin_3431	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_3431	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cpin_3431	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cpin_3431	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_3431	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_3431	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_3431	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cpin_3432	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cpin_3432	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_3432	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cpin_3432	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cpin_3432	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_3432	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_3432	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_3432	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cpin_3442	PWY-5642	2,4-dinitrotoluene degradation
Cpin_3442	PWY-6373	acrylate degradation
Cpin_3570	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cpin_3570	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cpin_3570	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cpin_3570	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cpin_3593	PWY-2723	trehalose degradation V
Cpin_3593	PWY-6317	galactose degradation I (Leloir pathway)
Cpin_3593	PWY-6737	starch degradation V
Cpin_3654	PWY-4381	fatty acid biosynthesis initiation I
Cpin_3654	PWY-5743	3-hydroxypropanoate cycle
Cpin_3654	PWY-5744	glyoxylate assimilation
Cpin_3654	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_3654	PWY-6679	jadomycin biosynthesis
Cpin_3654	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_3664	PWY-4381	fatty acid biosynthesis initiation I
Cpin_3664	PWY-5743	3-hydroxypropanoate cycle
Cpin_3664	PWY-5744	glyoxylate assimilation
Cpin_3664	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_3664	PWY-6679	jadomycin biosynthesis
Cpin_3664	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_3665	PWY-1042	glycolysis IV (plant cytosol)
Cpin_3665	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cpin_3665	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_3665	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_3665	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cpin_3668	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Cpin_3683	PWY-6654	phosphopantothenate biosynthesis III
Cpin_3688	PWY-5155	&beta;-alanine biosynthesis III
Cpin_3690	PWY-622	starch biosynthesis
Cpin_3691	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Cpin_3691	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Cpin_3695	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Cpin_3730	PWY-5344	L-homocysteine biosynthesis
Cpin_3757	PWY-7560	methylerythritol phosphate pathway II
Cpin_3777	PWY-3781	aerobic respiration I (cytochrome c)
Cpin_3777	PWY-4521	arsenite oxidation I (respiratory)
Cpin_3777	PWY-6692	Fe(II) oxidation
Cpin_3777	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cpin_3794	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_3805	PWY-6902	chitin degradation II
Cpin_3815	PWY-3781	aerobic respiration I (cytochrome c)
Cpin_3815	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Cpin_3815	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cpin_3815	PWY-6692	Fe(II) oxidation
Cpin_3937	PWY-43	putrescine biosynthesis II
Cpin_3944	PWY-6902	chitin degradation II
Cpin_3994	PWY-4261	glycerol degradation I
Cpin_4031	PWY-3341	L-proline biosynthesis III
Cpin_4031	PWY-4981	L-proline biosynthesis II (from arginine)
Cpin_4031	PWY-6344	L-ornithine degradation II (Stickland reaction)
Cpin_4031	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Cpin_4035	PWY-3861	mannitol degradation II
Cpin_4035	PWY-3881	mannitol biosynthesis
Cpin_4035	PWY-5659	GDP-mannose biosynthesis
Cpin_4035	PWY-7456	mannan degradation
Cpin_4035	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Cpin_4037	PWY-6123	inosine-5'-phosphate biosynthesis I
Cpin_4037	PWY-6124	inosine-5'-phosphate biosynthesis II
Cpin_4037	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_4037	PWY-7234	inosine-5'-phosphate biosynthesis III
Cpin_4038	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Cpin_4038	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Cpin_4051	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_4051	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_4119	PWY-5340	sulfate activation for sulfonation
Cpin_4135	PWY-6823	molybdenum cofactor biosynthesis
Cpin_4182	PWY-5344	L-homocysteine biosynthesis
Cpin_4219	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
Cpin_4240	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Cpin_4261	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Cpin_4473	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cpin_4474	PWY-5194	siroheme biosynthesis
Cpin_4474	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cpin_4476	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cpin_4477	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cpin_4479	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cpin_4483	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cpin_4483	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cpin_4483	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cpin_4484	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cpin_4484	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cpin_4484	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cpin_4485	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cpin_4485	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cpin_4485	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cpin_4487	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cpin_4487	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cpin_4487	PWY-6268	adenosylcobalamin salvage from cobalamin
Cpin_4487	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cpin_4528	PWY-6986	alginate degradation
Cpin_4556	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_4574	PWY-723	alkylnitronates degradation
Cpin_4587	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cpin_4587	PWY-5723	Rubisco shunt
Cpin_4591	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Cpin_4621	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cpin_4621	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cpin_4622	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Cpin_4694	PWY-2941	L-lysine biosynthesis II
Cpin_4694	PWY-5097	L-lysine biosynthesis VI
Cpin_4706	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Cpin_4713	PWY-5198	factor 420 biosynthesis
Cpin_4713	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
Cpin_4713	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Cpin_4722	PWY-622	starch biosynthesis
Cpin_4723	PWY-622	starch biosynthesis
Cpin_4725	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_4725	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_4726	PWY-4841	UDP-&alpha;-D-glucuronate biosynthesis (from <i>myo</i>-inositol)
Cpin_4731	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
Cpin_4731	PWY-6174	mevalonate pathway II (archaea)
Cpin_4731	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
Cpin_4731	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
Cpin_4731	PWY-7102	bisabolene biosynthesis
Cpin_4731	PWY-7391	isoprene biosynthesis II (engineered)
Cpin_4731	PWY-7524	mevalonate pathway III (archaea)
Cpin_4731	PWY-7560	methylerythritol phosphate pathway II
Cpin_4731	PWY-922	mevalonate pathway I
Cpin_4747	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cpin_4747	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cpin_4747	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cpin_4750	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Cpin_4753	PWY-3821	galactose degradation III
Cpin_4753	PWY-6317	galactose degradation I (Leloir pathway)
Cpin_4753	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Cpin_4753	PWY-6527	stachyose degradation
Cpin_4753	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Cpin_4753	PWY-7344	UDP-D-galactose biosynthesis
Cpin_4757	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Cpin_4803	PWY-6854	ethylene biosynthesis III (microbes)
Cpin_4811	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_4837	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_4837	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_4843	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_4843	PWY-7242	D-fructuronate degradation
Cpin_4979	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Cpin_4994	PWY-6902	chitin degradation II
Cpin_5028	PWY-6012	acyl carrier protein metabolism I
Cpin_5028	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cpin_5031	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cpin_5031	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cpin_5031	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cpin_5031	PWY-5994	palmitate biosynthesis I (animals and fungi)
Cpin_5031	PWY-6113	superpathway of mycolate biosynthesis
Cpin_5031	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cpin_5031	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cpin_5031	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_5031	PWYG-321	mycolate biosynthesis
Cpin_5056	PWY-6012	acyl carrier protein metabolism I
Cpin_5056	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cpin_5080	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Cpin_5088	PWY-2721	trehalose degradation III
Cpin_5088	PWY-2722	trehalose degradation IV
Cpin_5088	PWY-6317	galactose degradation I (Leloir pathway)
Cpin_5088	PWY-7459	kojibiose degradation
Cpin_5260	PWY-6788	cellulose degradation II (fungi)
Cpin_5260	PWY-6902	chitin degradation II
Cpin_5285	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_5285	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_5295	PWY-6174	mevalonate pathway II (archaea)
Cpin_5295	PWY-7391	isoprene biosynthesis II (engineered)
Cpin_5295	PWY-7524	mevalonate pathway III (archaea)
Cpin_5295	PWY-922	mevalonate pathway I
Cpin_5305	PWY-4381	fatty acid biosynthesis initiation I
Cpin_5305	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Cpin_5305	PWY-723	alkylnitronates degradation
Cpin_5305	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_5355	PWY-6785	hydrogen production VIII
Cpin_5393	PWY-7456	mannan degradation
Cpin_5397	PWY-7456	mannan degradation
Cpin_5399	PWY-7456	mannan degradation
Cpin_5411	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_5417	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
Cpin_5429	PWY-2941	L-lysine biosynthesis II
Cpin_5429	PWY-2942	L-lysine biosynthesis III
Cpin_5429	PWY-5097	L-lysine biosynthesis VI
Cpin_5429	PWY-6559	spermidine biosynthesis II
Cpin_5429	PWY-6562	norspermidine biosynthesis
Cpin_5429	PWY-7153	grixazone biosynthesis
Cpin_5430	PWY-702	L-methionine biosynthesis II
Cpin_5433	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Cpin_5433	PWY-5723	Rubisco shunt
Cpin_5453	PWY-6167	flavin biosynthesis II (archaea)
Cpin_5453	PWY-6168	flavin biosynthesis III (fungi)
Cpin_5465	PWY-6614	tetrahydrofolate biosynthesis
Cpin_5469	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Cpin_5469	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Cpin_5469	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_5469	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_5469	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Cpin_5469	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cpin_5469	PWY-7205	CMP phosphorylation
Cpin_5469	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cpin_5469	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_5469	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_5469	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_5469	PWY-7224	purine deoxyribonucleosides salvage
Cpin_5469	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_5469	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Cpin_5487	PWY-5686	UMP biosynthesis
Cpin_5491	PWY-6853	ethylene biosynthesis II (microbes)
Cpin_5494	PWY-3801	sucrose degradation II (sucrose synthase)
Cpin_5494	PWY-5054	sorbitol biosynthesis I
Cpin_5494	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Cpin_5494	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cpin_5494	PWY-5659	GDP-mannose biosynthesis
Cpin_5494	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_5494	PWY-621	sucrose degradation III (sucrose invertase)
Cpin_5494	PWY-622	starch biosynthesis
Cpin_5494	PWY-6531	mannitol cycle
Cpin_5494	PWY-6981	chitin biosynthesis
Cpin_5494	PWY-7238	sucrose biosynthesis II
Cpin_5494	PWY-7347	sucrose biosynthesis III
Cpin_5494	PWY-7385	1,3-propanediol biosynthesis (engineered)
Cpin_5497	PWY-6123	inosine-5'-phosphate biosynthesis I
Cpin_5497	PWY-6124	inosine-5'-phosphate biosynthesis II
Cpin_5497	PWY-7234	inosine-5'-phosphate biosynthesis III
Cpin_5502	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Cpin_5502	PWY-7248	pectin degradation III
Cpin_5513	PWY-1042	glycolysis IV (plant cytosol)
Cpin_5513	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_5513	PWY-6901	superpathway of glucose and xylose degradation
Cpin_5513	PWY-7003	glycerol degradation to butanol
Cpin_5553	PWY-6902	chitin degradation II
Cpin_5617	PWY-5943	&beta;-carotene biosynthesis
Cpin_5617	PWY-5947	lutein biosynthesis
Cpin_5638	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_5645	PWY-6527	stachyose degradation
Cpin_5671	PWY-5686	UMP biosynthesis
Cpin_5682	PWY-6823	molybdenum cofactor biosynthesis
Cpin_5682	PWY-6891	thiazole biosynthesis II (Bacillus)
Cpin_5682	PWY-6892	thiazole biosynthesis I (E. coli)
Cpin_5682	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Cpin_5705	PWY-6123	inosine-5'-phosphate biosynthesis I
Cpin_5705	PWY-7234	inosine-5'-phosphate biosynthesis III
Cpin_5708	PWY-6902	chitin degradation II
Cpin_5708	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
Cpin_5740	PWY-6527	stachyose degradation
Cpin_5748	PWY-6788	cellulose degradation II (fungi)
Cpin_5783	PWY-3781	aerobic respiration I (cytochrome c)
Cpin_5783	PWY-4521	arsenite oxidation I (respiratory)
Cpin_5783	PWY-6692	Fe(II) oxidation
Cpin_5783	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cpin_5786	PWY-3781	aerobic respiration I (cytochrome c)
Cpin_5786	PWY-4521	arsenite oxidation I (respiratory)
Cpin_5786	PWY-6692	Fe(II) oxidation
Cpin_5786	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cpin_5818	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Cpin_5818	PWY-7039	phosphatidate metabolism, as a signaling molecule
Cpin_5818	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cpin_5818	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Cpin_5842	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cpin_5842	PWY-6148	tetrahydromethanopterin biosynthesis
Cpin_5842	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Cpin_5842	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cpin_5844	PWY-5506	methanol oxidation to formaldehyde IV
Cpin_5884	PWY-6749	CMP-legionaminate biosynthesis I
Cpin_5908	PWY-5340	sulfate activation for sulfonation
Cpin_5927	PWY-4041	&gamma;-glutamyl cycle
Cpin_5927	PWY-5826	hypoglycin biosynthesis
Cpin_5934	PWY-6167	flavin biosynthesis II (archaea)
Cpin_5934	PWY-6168	flavin biosynthesis III (fungi)
Cpin_5934	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cpin_5940	PWY-6840	homoglutathione biosynthesis
Cpin_5940	PWY-7255	ergothioneine biosynthesis I (bacteria)
Cpin_5946	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_5946	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_5948	PWY-282	cuticular wax biosynthesis
Cpin_5955	PWY-2781	<i>cis</i>-zeatin biosynthesis
Cpin_6081	PWY-5530	sorbitol biosynthesis II
Cpin_6084	PWY-5663	tetrahydrobiopterin biosynthesis I
Cpin_6084	PWY-5664	tetrahydrobiopterin biosynthesis II
Cpin_6084	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cpin_6084	PWY-6703	preQ<sub>0</sub> biosynthesis
Cpin_6084	PWY-6983	tetrahydrobiopterin biosynthesis III
Cpin_6084	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Cpin_6087	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
Cpin_6087	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
Cpin_6087	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
Cpin_6087	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
Cpin_6087	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
Cpin_6087	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
Cpin_6087	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
Cpin_6087	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
Cpin_6087	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Cpin_6087	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
Cpin_6110	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cpin_6112	PWY-4202	arsenate detoxification I (glutaredoxin)
Cpin_6126	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Cpin_6128	PWY-5101	L-isoleucine biosynthesis II
Cpin_6128	PWY-5103	L-isoleucine biosynthesis III
Cpin_6128	PWY-5104	L-isoleucine biosynthesis IV
Cpin_6128	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Cpin_6128	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Cpin_6128	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Cpin_6128	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Cpin_6171	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_6173	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_6197	PWY-6938	NADH repair
Cpin_6209	PWY-1042	glycolysis IV (plant cytosol)
Cpin_6209	PWY-5484	glycolysis II (from fructose 6-phosphate)
Cpin_6209	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_6209	PWY-7003	glycerol degradation to butanol
Cpin_6227	PWY-5686	UMP biosynthesis
Cpin_6235	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cpin_6235	PWY-6148	tetrahydromethanopterin biosynthesis
Cpin_6235	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Cpin_6235	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Cpin_6260	PWY-5743	3-hydroxypropanoate cycle
Cpin_6260	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_6260	PWY-6728	methylaspartate cycle
Cpin_6260	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cpin_6263	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Cpin_6263	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Cpin_6268	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Cpin_6269	PWY-6012	acyl carrier protein metabolism I
Cpin_6269	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Cpin_6270	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_6276	PWY-5674	nitrate reduction IV (dissimilatory)
Cpin_6290	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cpin_6375	PWY-723	alkylnitronates degradation
Cpin_6386	PWY-5482	pyruvate fermentation to acetate II
Cpin_6386	PWY-5485	pyruvate fermentation to acetate IV
Cpin_6386	PWY-5497	purine nucleobases degradation II (anaerobic)
Cpin_6411	PWY-2301	<i>myo</i>-inositol biosynthesis
Cpin_6411	PWY-4702	phytate degradation I
Cpin_6411	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Cpin_6440	PWY-6936	seleno-amino acid biosynthesis
Cpin_6452	PWY-3841	folate transformations II
Cpin_6452	PWY-6614	tetrahydrofolate biosynthesis
Cpin_6453	PWY-3841	folate transformations II
Cpin_6453	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Cpin_6453	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Cpin_6453	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Cpin_6453	PWY-7199	pyrimidine deoxyribonucleosides salvage
Cpin_6453	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Cpin_6455	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
Cpin_6455	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
Cpin_6481	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Cpin_6481	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Cpin_6481	PWY-6936	seleno-amino acid biosynthesis
Cpin_6481	PWY-702	L-methionine biosynthesis II
Cpin_6497	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cpin_6497	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cpin_6499	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cpin_6500	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cpin_6500	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cpin_6501	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cpin_6501	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cpin_6502	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cpin_6502	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cpin_6503	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Cpin_6503	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Cpin_6504	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cpin_6504	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Cpin_6505	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Cpin_6523	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Cpin_6523	PWY-6167	flavin biosynthesis II (archaea)
Cpin_6523	PWY-6168	flavin biosynthesis III (fungi)
Cpin_6530	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
Cpin_6530	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Cpin_6530	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
Cpin_6530	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cpin_6531	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_6531	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_6534	PWY-3781	aerobic respiration I (cytochrome c)
Cpin_6534	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Cpin_6534	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cpin_6534	PWY-5690	TCA cycle II (plants and fungi)
Cpin_6534	PWY-6728	methylaspartate cycle
Cpin_6534	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cpin_6534	PWY-7254	TCA cycle VII (acetate-producers)
Cpin_6534	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cpin_6535	PWY-3781	aerobic respiration I (cytochrome c)
Cpin_6535	PWY-4302	aerobic respiration III (alternative oxidase pathway)
Cpin_6535	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cpin_6535	PWY-5690	TCA cycle II (plants and fungi)
Cpin_6535	PWY-6728	methylaspartate cycle
Cpin_6535	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cpin_6535	PWY-7254	TCA cycle VII (acetate-producers)
Cpin_6535	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
Cpin_6550	PWY-4983	L-citrulline-nitric oxide cycle
Cpin_6550	PWY-4984	urea cycle
Cpin_6550	PWY-5	canavanine biosynthesis
Cpin_6550	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cpin_6550	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cpin_6552	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cpin_6552	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cpin_6553	PWY-5686	UMP biosynthesis
Cpin_6555	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cpin_6555	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cpin_6556	PWY-4983	L-citrulline-nitric oxide cycle
Cpin_6556	PWY-4984	urea cycle
Cpin_6556	PWY-5	canavanine biosynthesis
Cpin_6556	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Cpin_6556	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Cpin_6570	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Cpin_6570	PWY-6855	chitin degradation I (archaea)
Cpin_6570	PWY-6906	chitin derivatives degradation
Cpin_6574	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_6574	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_6579	PWY-2201	folate transformations I
Cpin_6579	PWY-3841	folate transformations II
Cpin_6591	PWY-5913	TCA cycle VI (obligate autotrophs)
Cpin_6591	PWY-6549	L-glutamine biosynthesis III
Cpin_6591	PWY-6728	methylaspartate cycle
Cpin_6591	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cpin_6591	PWY-7124	ethylene biosynthesis V (engineered)
Cpin_6591	PWY-7254	TCA cycle VII (acetate-producers)
Cpin_6591	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cpin_6592	PWY-5913	TCA cycle VI (obligate autotrophs)
Cpin_6592	PWY-6549	L-glutamine biosynthesis III
Cpin_6592	PWY-6728	methylaspartate cycle
Cpin_6592	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cpin_6592	PWY-7124	ethylene biosynthesis V (engineered)
Cpin_6592	PWY-7254	TCA cycle VII (acetate-producers)
Cpin_6592	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Cpin_6601	PWY-4202	arsenate detoxification I (glutaredoxin)
Cpin_6601	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cpin_6601	PWY-6608	guanosine nucleotides degradation III
Cpin_6601	PWY-6609	adenine and adenosine salvage III
Cpin_6601	PWY-6611	adenine and adenosine salvage V
Cpin_6601	PWY-6620	guanine and guanosine salvage
Cpin_6601	PWY-6627	salinosporamide A biosynthesis
Cpin_6601	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Cpin_6601	PWY-7179	purine deoxyribonucleosides degradation I
Cpin_6601	PWY-7179-1	purine deoxyribonucleosides degradation
Cpin_6602	PWY-5392	reductive TCA cycle II
Cpin_6602	PWY-5537	pyruvate fermentation to acetate V
Cpin_6602	PWY-5538	pyruvate fermentation to acetate VI
Cpin_6602	PWY-5690	TCA cycle II (plants and fungi)
Cpin_6602	PWY-5913	TCA cycle VI (obligate autotrophs)
Cpin_6602	PWY-6728	methylaspartate cycle
Cpin_6602	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Cpin_6602	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
Cpin_6612	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Cpin_6612	PWY-7177	UTP and CTP dephosphorylation II
Cpin_6612	PWY-7185	UTP and CTP dephosphorylation I
Cpin_6615	PWY-5194	siroheme biosynthesis
Cpin_6615	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cpin_6616	PWY-5194	siroheme biosynthesis
Cpin_6616	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Cpin_6617	PWY-6683	sulfate reduction III (assimilatory)
Cpin_6621	PWY-7560	methylerythritol phosphate pathway II
Cpin_6626	PWY-7205	CMP phosphorylation
Cpin_6633	PWY-2941	L-lysine biosynthesis II
Cpin_6633	PWY-2942	L-lysine biosynthesis III
Cpin_6633	PWY-5097	L-lysine biosynthesis VI
Cpin_6634	PWY-4381	fatty acid biosynthesis initiation I
Cpin_6634	PWY-5743	3-hydroxypropanoate cycle
Cpin_6634	PWY-5744	glyoxylate assimilation
Cpin_6634	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_6634	PWY-6679	jadomycin biosynthesis
Cpin_6634	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_6671	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Cpin_6671	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Cpin_6715	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
Cpin_6715	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Cpin_6768	PWY-5691	urate degradation to allantoin I
Cpin_6769	PWY-5686	UMP biosynthesis
Cpin_6769	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
Cpin_6769	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
Cpin_6772	PWY-5691	urate degradation to allantoin I
Cpin_6772	PWY-7394	urate degradation to allantoin II
Cpin_6773	PWY-5691	urate degradation to allantoin I
Cpin_6773	PWY-7394	urate degradation to allantoin II
Cpin_6813	PWY-6788	cellulose degradation II (fungi)
Cpin_6827	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Cpin_6830	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Cpin_6830	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Cpin_6830	PWY-7242	D-fructuronate degradation
Cpin_6830	PWY-7310	D-glucosaminate degradation
Cpin_6832	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Cpin_6832	PWY-7248	pectin degradation III
Cpin_6839	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Cpin_6840	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Cpin_6850	PWY-4381	fatty acid biosynthesis initiation I
Cpin_6854	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_6874	PWY-2941	L-lysine biosynthesis II
Cpin_6874	PWY-2942	L-lysine biosynthesis III
Cpin_6874	PWY-5097	L-lysine biosynthesis VI
Cpin_6874	PWY-6559	spermidine biosynthesis II
Cpin_6874	PWY-6562	norspermidine biosynthesis
Cpin_6874	PWY-7153	grixazone biosynthesis
Cpin_6889	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Cpin_6889	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Cpin_6889	PWY-6268	adenosylcobalamin salvage from cobalamin
Cpin_6889	PWY-6269	adenosylcobalamin salvage from cobinamide II
Cpin_6892	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Cpin_6892	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Cpin_6892	PWY-5989	stearate biosynthesis II (bacteria and plants)
Cpin_6892	PWY-6113	superpathway of mycolate biosynthesis
Cpin_6892	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Cpin_6892	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Cpin_6892	PWY-7096	triclosan resistance
Cpin_6892	PWYG-321	mycolate biosynthesis
Cpin_6896	PWY-5663	tetrahydrobiopterin biosynthesis I
Cpin_6896	PWY-5664	tetrahydrobiopterin biosynthesis II
Cpin_6896	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cpin_6896	PWY-6703	preQ<sub>0</sub> biosynthesis
Cpin_6896	PWY-6983	tetrahydrobiopterin biosynthesis III
Cpin_6896	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Cpin_6908	PWY-6599	guanine and guanosine salvage II
Cpin_6908	PWY-6609	adenine and adenosine salvage III
Cpin_6908	PWY-6610	adenine and adenosine salvage IV
Cpin_6908	PWY-6620	guanine and guanosine salvage
Cpin_6918	PWY-6700	queuosine biosynthesis
Cpin_6927	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cpin_6927	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cpin_6927	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cpin_6930	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
Cpin_6930	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
Cpin_6931	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Cpin_6931	PWY-2201	folate transformations I
Cpin_6931	PWY-3841	folate transformations II
Cpin_6931	PWY-5030	L-histidine degradation III
Cpin_6931	PWY-5497	purine nucleobases degradation II (anaerobic)
Cpin_6931	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Cpin_6932	PWY-6703	preQ<sub>0</sub> biosynthesis
Cpin_6936	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cpin_6936	PWY-6596	adenosine nucleotides degradation I
Cpin_6936	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_6948	PWY-4381	fatty acid biosynthesis initiation I
Cpin_6954	PWY-4381	fatty acid biosynthesis initiation I
Cpin_6954	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Cpin_6954	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Cpin_6956	PWY-5663	tetrahydrobiopterin biosynthesis I
Cpin_6956	PWY-5664	tetrahydrobiopterin biosynthesis II
Cpin_6956	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Cpin_6956	PWY-6703	preQ<sub>0</sub> biosynthesis
Cpin_6956	PWY-6983	tetrahydrobiopterin biosynthesis III
Cpin_6956	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Cpin_6958	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
Cpin_6975	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cpin_6975	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cpin_6975	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cpin_6976	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_6976	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_6978	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Cpin_6978	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Cpin_6978	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Cpin_6978	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Cpin_6979	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Cpin_6979	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Cpin_6999	PWY-7533	gliotoxin biosynthesis
Cpin_7000	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Cpin_7031	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Cpin_7031	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Cpin_7031	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Cpin_7048	PWY-5958	acridone alkaloid biosynthesis
Cpin_7048	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Cpin_7048	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Cpin_7050	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_7055	PWY-6807	xyloglucan degradation II (exoglucanase)
Cpin_7059	PWY-5381	pyridine nucleotide cycling (plants)
Cpin_7059	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cpin_7059	PWY-6596	adenosine nucleotides degradation I
Cpin_7059	PWY-6606	guanosine nucleotides degradation II
Cpin_7059	PWY-6607	guanosine nucleotides degradation I
Cpin_7059	PWY-6608	guanosine nucleotides degradation III
Cpin_7059	PWY-7185	UTP and CTP dephosphorylation I
Cpin_7062	PWY-1361	benzoyl-CoA degradation I (aerobic)
Cpin_7062	PWY-5109	2-methylbutanoate biosynthesis
Cpin_7062	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Cpin_7062	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Cpin_7062	PWY-5177	glutaryl-CoA degradation
Cpin_7062	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Cpin_7062	PWY-6435	4-hydroxybenzoate biosynthesis V
Cpin_7062	PWY-6583	pyruvate fermentation to butanol I
Cpin_7062	PWY-6863	pyruvate fermentation to hexanol
Cpin_7062	PWY-6883	pyruvate fermentation to butanol II
Cpin_7062	PWY-6944	androstenedione degradation
Cpin_7062	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Cpin_7062	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Cpin_7062	PWY-7007	methyl ketone biosynthesis
Cpin_7062	PWY-7046	4-coumarate degradation (anaerobic)
Cpin_7062	PWY-7094	fatty acid salvage
Cpin_7062	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Cpin_7062	PWY-735	jasmonic acid biosynthesis
Cpin_7062	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Cpin_7073	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Cpin_7094	PWY-5839	menaquinol-7 biosynthesis
Cpin_7094	PWY-5844	menaquinol-9 biosynthesis
Cpin_7094	PWY-5849	menaquinol-6 biosynthesis
Cpin_7094	PWY-5890	menaquinol-10 biosynthesis
Cpin_7094	PWY-5891	menaquinol-11 biosynthesis
Cpin_7094	PWY-5892	menaquinol-12 biosynthesis
Cpin_7094	PWY-5895	menaquinol-13 biosynthesis
Cpin_7096	PWY-5686	UMP biosynthesis
Cpin_7124	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
Cpin_7124	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
Cpin_7208	PWY-5874	heme degradation
Cpin_7208	PWY-5915	phycoerythrobilin biosynthesis I
Cpin_7208	PWY-5917	phycocyanobilin biosynthesis
Cpin_7208	PWY-7170	phytochromobilin biosynthesis
Cpin_7211	PWY-381	nitrate reduction II (assimilatory)
Cpin_7211	PWY-5675	nitrate reduction V (assimilatory)
Cpin_7211	PWY-6549	L-glutamine biosynthesis III
Cpin_7211	PWY-6963	ammonia assimilation cycle I
Cpin_7211	PWY-6964	ammonia assimilation cycle II
Cpin_7230	PWY-5686	UMP biosynthesis
Cpin_7245	PWY-4202	arsenate detoxification I (glutaredoxin)
Cpin_7245	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Cpin_7245	PWY-6608	guanosine nucleotides degradation III
Cpin_7245	PWY-6609	adenine and adenosine salvage III
Cpin_7245	PWY-6611	adenine and adenosine salvage V
Cpin_7245	PWY-6620	guanine and guanosine salvage
Cpin_7245	PWY-6627	salinosporamide A biosynthesis
Cpin_7245	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Cpin_7245	PWY-7179	purine deoxyribonucleosides degradation I
Cpin_7245	PWY-7179-1	purine deoxyribonucleosides degradation
Cpin_7262	PWY-6164	3-dehydroquinate biosynthesis I
Cpin_7285	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Cpin_7293	PWY-1622	formaldehyde assimilation I (serine pathway)
Cpin_7293	PWY-181	photorespiration
Cpin_7293	PWY-2161	folate polyglutamylation
Cpin_7293	PWY-2201	folate transformations I
Cpin_7293	PWY-3661	glycine betaine degradation I
Cpin_7293	PWY-3661-1	glycine betaine degradation II (mammalian)
Cpin_7293	PWY-3841	folate transformations II
Cpin_7293	PWY-5497	purine nucleobases degradation II (anaerobic)
Cpin_7295	PWY-723	alkylnitronates degradation
