CPE3_0001	SSF51569	Aldolase
CPE3_0004	SSF46557	GreA transcript cleavage protein, N-terminal domain
CPE3_0004	SSF54534	FKBP-like
CPE3_0006	SSF53383	PLP-dependent transferases
CPE3_0008	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0008	SSF52980	Restriction endonuclease-like
CPE3_0009	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0010	SSF103473	MFS general substrate transporter
CPE3_0011	SSF52821	Rhodanese/Cell cycle control phosphatase
CPE3_0012	SSF55174	Alpha-L RNA-binding motif
CPE3_0013	SSF51658	Xylose isomerase-like
CPE3_0020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0022	SSF51569	Aldolase
CPE3_0024	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CPE3_0025	SSF55120	Pseudouridine synthase
CPE3_0025	SSF55174	Alpha-L RNA-binding motif
CPE3_0028	SSF56719	Type II DNA topoisomerase
CPE3_0029	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0029	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPE3_0029	SSF56719	Type II DNA topoisomerase
CPE3_0030	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
CPE3_0031	SSF69635	Type III secretory system chaperone-like
CPE3_0032	SSF49879	SMAD/FHA domain
CPE3_0035	SSF48452	TPR-like
CPE3_0037	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0040	SSF101801	Surface presentation of antigens (SPOA)
CPE3_0041	SSF56112	Protein kinase-like (PK-like)
CPE3_0044	SSF55931	Glutamine synthetase/guanido kinase
CPE3_0045	SSF46600	C-terminal UvrC-binding domain of UvrB
CPE3_0048	SSF55194	Ribosome recycling factor, RRF
CPE3_0049	SSF53633	Carbamate kinase-like
CPE3_0050	SSF46934	UBA-like
CPE3_0050	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
CPE3_0051	SSF52313	Ribosomal protein S2
CPE3_0054	SSF56519	Penicillin binding protein dimerisation domain
CPE3_0054	SSF56601	beta-lactamase/transpeptidase-like
CPE3_0055	SSF48452	TPR-like
CPE3_0056	SSF101960	Stabilizer of iron transporter SufD
CPE3_0057	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0058	SSF101960	Stabilizer of iron transporter SufD
CPE3_0059	SSF53383	PLP-dependent transferases
CPE3_0060	SSF88713	Glycoside hydrolase/deacetylase
CPE3_0062	SSF109709	KorB DNA-binding domain-like
CPE3_0062	SSF110849	ParB/Sulfiredoxin
CPE3_0063	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0064	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0065	SSF109755	PhoU-like
CPE3_0067	SSF53748	Phosphoglycerate kinase
CPE3_0071	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0072	SSF56601	beta-lactamase/transpeptidase-like
CPE3_0074	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPE3_0076	SSF48452	TPR-like
CPE3_0078	SSF89550	PHP domain-like
CPE3_0079	SSF103473	MFS general substrate transporter
CPE3_0080	SSF52954	Class II aaRS ABD-related
CPE3_0080	SSF55681	Class II aaRS and biotin synthetases
CPE3_0081	SSF50249	Nucleic acid-binding proteins
CPE3_0081	SSF55261	GAD domain-like
CPE3_0081	SSF55681	Class II aaRS and biotin synthetases
CPE3_0082	SSF54534	FKBP-like
CPE3_0083	SSF75217	alpha/beta knot
CPE3_0084	SSF52833	Thioredoxin-like
CPE3_0087	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0088	SSF53098	Ribonuclease H-like
CPE3_0089	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CPE3_0090	SSF56317	Carbon-nitrogen hydrolase
CPE3_0091	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0092	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
CPE3_0093	SSF51161	Trimeric LpxA-like enzymes
CPE3_0094	SSF50486	FMT C-terminal domain-like
CPE3_0094	SSF53328	Formyltransferase
CPE3_0096	SSF50447	Translation proteins
CPE3_0097	SSF52166	Ribosomal protein L4
CPE3_0098	SSF54189	Ribosomal proteins S24e, L23 and L15e
CPE3_0099	SSF50104	Translation proteins SH3-like domain
CPE3_0099	SSF50249	Nucleic acid-binding proteins
CPE3_0100	SSF54570	Ribosomal protein S19
CPE3_0101	SSF54843	Ribosomal protein L22
CPE3_0102	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CPE3_0102	SSF54821	Ribosomal protein S3 C-terminal domain
CPE3_0103	SSF54686	Ribosomal protein L16p/L10e
CPE3_0104	SSF46561	Ribosomal protein L29 (L29p)
CPE3_0105	SSF50249	Nucleic acid-binding proteins
CPE3_0106	SSF50193	Ribosomal protein L14
CPE3_0107	SSF50104	Translation proteins SH3-like domain
CPE3_0108	SSF55282	RL5-like
CPE3_0109	SSF56047	Ribosomal protein S8
CPE3_0110	SSF56053	Ribosomal protein L6
CPE3_0111	SSF53137	Translational machinery components
CPE3_0112	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0112	SSF54768	dsRNA-binding domain-like
CPE3_0113	SSF52080	Ribosomal proteins L15p and L18e
CPE3_0114	SSF103491	Preprotein translocase SecY subunit
CPE3_0115	SSF46946	S13-like H2TH domain
CPE3_0116	SSF53137	Translational machinery components
CPE3_0117	SSF47789	C-terminal domain of RNA polymerase alpha subunit
CPE3_0117	SSF55257	RBP11-like subunits of RNA polymerase
CPE3_0117	SSF56553	Insert subdomain of RNA polymerase alpha subunit
CPE3_0118	SSF64263	Prokaryotic ribosomal protein L17
CPE3_0119	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0119	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPE3_0123	SSF53098	Ribonuclease H-like
CPE3_0124	SSF46929	DNA helicase RuvA subunit, C-terminal domain
CPE3_0124	SSF47781	RuvA domain 2-like
CPE3_0124	SSF50249	Nucleic acid-binding proteins
CPE3_0125	SSF54919	Nucleoside diphosphate kinase, NDK
CPE3_0126	SSF55681	Class II aaRS and biotin synthetases
CPE3_0127	SSF51905	FAD/NAD(P)-binding domain
CPE3_0128	SSF48024	N-terminal domain of DnaB helicase
CPE3_0128	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0132	SSF52096	ClpP/crotonase
CPE3_0133	SSF47807	5' to 3' exonuclease, C-terminal subdomain
CPE3_0133	SSF53098	Ribonuclease H-like
CPE3_0133	SSF56672	DNA/RNA polymerases
CPE3_0133	SSF88723	PIN domain-like
CPE3_0134	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0135	SSF50249	Nucleic acid-binding proteins
CPE3_0135	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0135	SSF68912	Rho N-terminal domain-like
CPE3_0137	SSF53271	PRTase-like
CPE3_0138	SSF51161	Trimeric LpxA-like enzymes
CPE3_0138	SSF53448	Nucleotide-diphospho-sugar transferases
CPE3_0139	SSF56300	Metallo-dependent phosphatases
CPE3_0140	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0141	SSF53850	Periplasmic binding protein-like II
CPE3_0142	SSF53800	Chelatase
CPE3_0143	SSF48452	TPR-like
CPE3_0145	SSF53850	Periplasmic binding protein-like II
CPE3_0146	SSF161098	MetI-like
CPE3_0147	SSF161098	MetI-like
CPE3_0148	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
CPE3_0149	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
CPE3_0150	SSF46955	Putative DNA-binding domain
CPE3_0150	SSF50249	Nucleic acid-binding proteins
CPE3_0150	SSF54991	Anticodon-binding domain of PheRS
CPE3_0150	SSF55681	Class II aaRS and biotin synthetases
CPE3_0150	SSF56037	PheT/TilS domain
CPE3_0151	SSF54106	LysM domain
CPE3_0156	SSF50249	Nucleic acid-binding proteins
CPE3_0156	SSF57863	ArfGap/RecO-like zinc finger
CPE3_0158	SSF69754	Ribosome binding protein Y (YfiA homologue)
CPE3_0160	SSF52172	CheY-like
CPE3_0160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0162	SSF47384	Homodimeric domain of signal transducing histidine kinase
CPE3_0162	SSF55785	PYP-like sensor domain (PAS domain)
CPE3_0162	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPE3_0166	SSF56784	HAD-like
CPE3_0167	SSF55120	Pseudouridine synthase
CPE3_0168	SSF53448	Nucleotide-diphospho-sugar transferases
CPE3_0169	SSF56300	Metallo-dependent phosphatases
CPE3_0170	SSF47592	SWIB/MDM2 domain
CPE3_0171	SSF75620	Release factor
CPE3_0172	SSF55729	Acyl-CoA N-acyltransferases (Nat)
CPE3_0174	SSF75625	YebC-like
CPE3_0176	SSF55205	EPT/RTPC-like
CPE3_0177	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPE3_0177	SSF52374	Nucleotidylyl transferase
CPE3_0177	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
CPE3_0178	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CPE3_0179	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0181	SSF64005	Undecaprenyl diphosphate synthase
CPE3_0183	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
CPE3_0184	SSF64182	DHH phosphoesterases
CPE3_0186	SSF53474	alpha/beta-Hydrolases
CPE3_0188	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
CPE3_0188	SSF52374	Nucleotidylyl transferase
CPE3_0193	SSF50156	PDZ domain-like
CPE3_0193	SSF52096	ClpP/crotonase
CPE3_0195	SSF53613	Ribokinase-like
CPE3_0196	SSF50249	Nucleic acid-binding proteins
CPE3_0197	SSF47973	Ribosomal protein S7
CPE3_0198	SSF50447	Translation proteins
CPE3_0198	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0198	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0198	SSF54980	EF-G C-terminal domain-like
CPE3_0199	SSF54999	Ribosomal protein S10
CPE3_0200	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CPE3_0200	SSF63380	Riboflavin synthase domain-like
CPE3_0201	SSF69765	IpsF-like
CPE3_0203	SSF141091	L21p-like
CPE3_0204	SSF110324	Ribosomal L27 protein-like
CPE3_0205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0205	SSF82051	Obg GTP-binding protein N-terminal domain
CPE3_0206	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CPE3_0207	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0208	SSF53807	"Helical backbone" metal receptor
CPE3_0210	SSF103515	Autotransporter
CPE3_0210	SSF51126	Pectin lyase-like
CPE3_0211	SSF103515	Autotransporter
CPE3_0211	SSF51126	Pectin lyase-like
CPE3_0216	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
CPE3_0216	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CPE3_0218	SSF63380	Riboflavin synthase domain-like
CPE3_0219	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0220	SSF55315	L30e-like
CPE3_0220	SSF75217	alpha/beta knot
CPE3_0221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0222	SSF118215	Proton glutamate symport protein
CPE3_0223	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CPE3_0223	SSF51230	Single hybrid motif
CPE3_0223	SSF52777	CoA-dependent acyltransferases
CPE3_0224	SSF53697	SIS domain
CPE3_0228	SSF69618	HemD-like
CPE3_0229	SSF53383	PLP-dependent transferases
CPE3_0230	SSF52096	ClpP/crotonase
CPE3_0231	SSF54506	Diaminopimelate epimerase-like
CPE3_0234	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0235	SSF53850	Periplasmic binding protein-like II
CPE3_0236	SSF102114	Radical SAM enzymes
CPE3_0238	SSF52091	SpoIIaa-like
CPE3_0239	SSF54631	CBS-domain pair
CPE3_0239	SSF56176	FAD-binding/transporter-associated domain-like
CPE3_0240	SSF55486	Metalloproteases ("zincins"), catalytic domain
CPE3_0244	SSF50486	FMT C-terminal domain-like
CPE3_0245	SSF50249	Nucleic acid-binding proteins
CPE3_0246	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
CPE3_0246	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
CPE3_0246	SSF53067	Actin-like ATPase domain
CPE3_0247	SSF51064	Head domain of nucleotide exchange factor GrpE
CPE3_0247	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
CPE3_0248	SSF46785	"Winged helix" DNA-binding domain
CPE3_0248	SSF55781	GAF domain-like
CPE3_0249	SSF52954	Class II aaRS ABD-related
CPE3_0249	SSF55681	Class II aaRS and biotin synthetases
CPE3_0249	SSF55826	YbaK/ProRS associated domain
CPE3_0252	SSF69786	YggU-like
CPE3_0253	SSF53822	Periplasmic binding protein-like I
CPE3_0254	SSF53383	PLP-dependent transferases
CPE3_0256	SSF102405	MCP/YpsA-like
CPE3_0258	SSF54197	HIT-like
CPE3_0259	SSF48371	ARM repeat
CPE3_0263	SSF51569	Aldolase
CPE3_0264	SSF54001	Cysteine proteinases
CPE3_0265	SSF53850	Periplasmic binding protein-like II
CPE3_0267	SSF56281	Metallo-hydrolase/oxidoreductase
CPE3_0268	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0269	SSF102114	Radical SAM enzymes
CPE3_0271	SSF51011	Glycosyl hydrolase domain
CPE3_0271	SSF51445	(Trans)glycosidases
CPE3_0271	SSF81296	E set domains
CPE3_0275	SSF103515	Autotransporter
CPE3_0276	SSF103515	Autotransporter
CPE3_0277	SSF103515	Autotransporter
CPE3_0278	SSF103515	Autotransporter
CPE3_0281	SSF103515	Autotransporter
CPE3_0281	SSF51126	Pectin lyase-like
CPE3_0282	SSF103515	Autotransporter
CPE3_0283	SSF103515	Autotransporter
CPE3_0284	SSF103515	Autotransporter
CPE3_0285	SSF103515	Autotransporter
CPE3_0286	SSF103515	Autotransporter
CPE3_0287	SSF103515	Autotransporter
CPE3_0287	SSF51126	Pectin lyase-like
CPE3_0289	SSF141000	Glu-tRNAGln amidotransferase C subunit
CPE3_0290	SSF75304	Amidase signature (AS) enzymes
CPE3_0291	SSF55931	Glutamine synthetase/guanido kinase
CPE3_0291	SSF89095	GatB/YqeY motif
CPE3_0295	SSF53098	Ribonuclease H-like
CPE3_0301	SSF48208	Six-hairpin glycosidases
CPE3_0301	SSF52833	Thioredoxin-like
CPE3_0302	SSF109998	Triger factor/SurA peptide-binding domain-like
CPE3_0303	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0304	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPE3_0304	SSF52922	TK C-terminal domain-like
CPE3_0306	SSF116842	XseB-like
CPE3_0308	SSF51351	Triosephosphate isomerase (TIM)
CPE3_0310	SSF56420	Peptide deformylase
CPE3_0312	SSF48371	ARM repeat
CPE3_0313	SSF52972	ITPase-like
CPE3_0314	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0315	SSF56349	DNA breaking-rejoining enzymes
CPE3_0316	SSF56281	Metallo-hydrolase/oxidoreductase
CPE3_0318	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0318	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0318	SSF88697	PUA domain-like
CPE3_0319	SSF53067	Actin-like ATPase domain
CPE3_0321	SSF46565	Chaperone J-domain
CPE3_0321	SSF49493	HSP40/DnaJ peptide-binding domain
CPE3_0321	SSF57938	DnaJ/Hsp40 cysteine-rich domain
CPE3_0322	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPE3_0322	SSF52922	TK C-terminal domain-like
CPE3_0326	SSF55594	HPr-like
CPE3_0327	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
CPE3_0327	SSF51621	Phosphoenolpyruvate/pyruvate domain
CPE3_0327	SSF52009	Phosphohistidine domain
CPE3_0328	SSF82607	YbaB-like
CPE3_0329	SSF48019	post-AAA+ oligomerization domain-like
CPE3_0329	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0331	SSF53850	Periplasmic binding protein-like II
CPE3_0332	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0332	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0333	SSF54768	dsRNA-binding domain-like
CPE3_0333	SSF69065	RNase III domain-like
CPE3_0335	SSF53738	Phosphoglucomutase, first 3 domains
CPE3_0335	SSF55957	Phosphoglucomutase, C-terminal domain
CPE3_0336	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
CPE3_0336	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
CPE3_0337	SSF52096	ClpP/crotonase
CPE3_0338	SSF51283	dUTPase-like
CPE3_0339	SSF55804	Phoshotransferase/anion transport protein
CPE3_0340	SSF46955	Putative DNA-binding domain
CPE3_0340	SSF55804	Phoshotransferase/anion transport protein
CPE3_0345	SSF52402	Adenine nucleotide alpha hydrolases-like
CPE3_0346	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0346	SSF81923	Double Clp-N motif
CPE3_0347	SSF55681	Class II aaRS and biotin synthetases
CPE3_0348	SSF56024	Phospholipase D/nuclease
CPE3_0350	SSF51230	Single hybrid motif
CPE3_0359	SSF48295	TrpR-like
CPE3_0359	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0360	SSF48452	TPR-like
CPE3_0362	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0362	SSF81799	Putative methyltransferase TM0872, insert domain
CPE3_0364	SSF56519	Penicillin binding protein dimerisation domain
CPE3_0364	SSF56601	beta-lactamase/transpeptidase-like
CPE3_0365	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPE3_0365	SSF53623	MurD-like peptide ligases, catalytic domain
CPE3_0365	SSF63418	MurE/MurF N-terminal domain
CPE3_0366	SSF53187	Zn-dependent exopeptidases
CPE3_0368	SSF47729	IHF-like DNA-binding proteins
CPE3_0370	SSF52096	ClpP/crotonase
CPE3_0371	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0371	SSF90123	ABC transporter transmembrane region
CPE3_0372	SSF53167	Purine and uridine phosphorylases
CPE3_0373	SSF53850	Periplasmic binding protein-like II
CPE3_0374	SSF53098	Ribonuclease H-like
CPE3_0377	SSF56784	HAD-like
CPE3_0378	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0382	SSF55120	Pseudouridine synthase
CPE3_0382	SSF55174	Alpha-L RNA-binding motif
CPE3_0383	SSF48150	DNA-glycosylase
CPE3_0383	SSF55811	Nudix
CPE3_0384	SSF101386	all-alpha NTP pyrophosphatases
CPE3_0387	SSF81606	PP2C-like
CPE3_0388	SSF53383	PLP-dependent transferases
CPE3_0389	SSF54631	CBS-domain pair
CPE3_0389	SSF56176	FAD-binding/transporter-associated domain-like
CPE3_0390	SSF54631	CBS-domain pair
CPE3_0390	SSF56176	FAD-binding/transporter-associated domain-like
CPE3_0392	SSF51283	dUTPase-like
CPE3_0393	SSF46785	"Winged helix" DNA-binding domain
CPE3_0393	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0395	SSF51445	(Trans)glycosidases
CPE3_0395	SSF81296	E set domains
CPE3_0396	SSF69635	Type III secretory system chaperone-like
CPE3_0397	SSF50249	Nucleic acid-binding proteins
CPE3_0398	SSF52949	Macro domain-like
CPE3_0398	SSF53187	Zn-dependent exopeptidases
CPE3_0400	SSF48019	post-AAA+ oligomerization domain-like
CPE3_0401	SSF53790	Tetrapyrrole methylase
CPE3_0402	SSF102114	Radical SAM enzymes
CPE3_0404	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPE3_0405	SSF51230	Single hybrid motif
CPE3_0405	SSF52777	CoA-dependent acyltransferases
CPE3_0406	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
CPE3_0407	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
CPE3_0409	SSF52949	Macro domain-like
CPE3_0411	SSF54292	2Fe-2S ferredoxin-like
CPE3_0414	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CPE3_0414	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CPE3_0415	SSF52374	Nucleotidylyl transferase
CPE3_0415	SSF55174	Alpha-L RNA-binding motif
CPE3_0416	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPE3_0416	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0417	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0417	SSF54980	EF-G C-terminal domain-like
CPE3_0422	SSF53807	"Helical backbone" metal receptor
CPE3_0423	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0424	SSF47979	Iron-dependent repressor protein, dimerization domain
CPE3_0424	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CPE3_0425	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
CPE3_0426	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0426	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPE3_0426	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
CPE3_0427	SSF50156	PDZ domain-like
CPE3_0428	SSF53474	alpha/beta-Hydrolases
CPE3_0429	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0430	SSF55979	DNA clamp
CPE3_0431	SSF74982	Small protein B (SmpB)
CPE3_0432	SSF143631	ApbE-like
CPE3_0433	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0433	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CPE3_0438	SSF56024	Phospholipase D/nuclease
CPE3_0439	SSF143968	UbiD C-terminal domain-like
CPE3_0439	SSF50475	FMN-binding split barrel
CPE3_0440	SSF143800	L28p-like
CPE3_0441	SSF51445	(Trans)glycosidases
CPE3_0442	SSF69635	Type III secretory system chaperone-like
CPE3_0443	SSF140591	Type III secretion system domain
CPE3_0445	SSF160544	EscU C-terminal domain-like
CPE3_0446	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0446	SSF81271	TGS-like
CPE3_0447	SSF52374	Nucleotidylyl transferase
CPE3_0447	SSF82114	Riboflavin kinase-like
CPE3_0448	SSF55120	Pseudouridine synthase
CPE3_0449	SSF89919	Ribosome-binding factor A, RbfA
CPE3_0450	SSF50447	Translation proteins
CPE3_0450	SSF52156	Initiation factor IF2/eIF5b, domain 3
CPE3_0450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0451	SSF47794	Rad51 N-terminal domain-like
CPE3_0451	SSF50249	Nucleic acid-binding proteins
CPE3_0451	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CPE3_0451	SSF69705	Transcription factor NusA, N-terminal domain
CPE3_0452	SSF50249	Nucleic acid-binding proteins
CPE3_0453	SSF51905	FAD/NAD(P)-binding domain
CPE3_0454	SSF56214	4'-phosphopantetheinyl transferase
CPE3_0458	SSF48295	TrpR-like
CPE3_0458	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0460	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPE3_0461	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
CPE3_0461	SSF51230	Single hybrid motif
CPE3_0461	SSF52777	CoA-dependent acyltransferases
CPE3_0462	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPE3_0462	SSF52922	TK C-terminal domain-like
CPE3_0463	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPE3_0465	SSF51161	Trimeric LpxA-like enzymes
CPE3_0466	SSF111384	OmpH-like
CPE3_0468	SSF111304	Recombination protein RecR
CPE3_0469	SSF53901	Thiolase-like
CPE3_0470	SSF52151	FabD/lysophospholipase-like
CPE3_0470	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
CPE3_0471	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0472	SSF47336	ACP-like
CPE3_0473	SSF51206	cAMP-binding domain-like
CPE3_0474	SSF103473	MFS general substrate transporter
CPE3_0474	SSF48371	ARM repeat
CPE3_0477	SSF161070	SNF-like
CPE3_0478	SSF118215	Proton glutamate symport protein
CPE3_0480	SSF48452	TPR-like
CPE3_0480	SSF81901	HCP-like
CPE3_0481	SSF158791	MgtE N-terminal domain-like
CPE3_0481	SSF161093	MgtE membrane domain-like
CPE3_0481	SSF54631	CBS-domain pair
CPE3_0484	SSF51569	Aldolase
CPE3_0486	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0486	SSF55021	ACT-like
CPE3_0487	SSF161098	MetI-like
CPE3_0488	SSF53850	Periplasmic binding protein-like II
CPE3_0492	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0492	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPE3_0492	SSF56719	Type II DNA topoisomerase
CPE3_0493	SSF101904	GyrA/ParC C-terminal domain-like
CPE3_0493	SSF56719	Type II DNA topoisomerase
CPE3_0494	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0495	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0496	SSF53474	alpha/beta-Hydrolases
CPE3_0497	SSF55821	YrdC/RibB
CPE3_0498	SSF51556	Metallo-dependent hydrolases
CPE3_0502	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
CPE3_0506	SSF64167	SurE-like
CPE3_0507	SSF52402	Adenine nucleotide alpha hydrolases-like
CPE3_0508	SSF103642	Sec-C motif
CPE3_0514	SSF102114	Radical SAM enzymes
CPE3_0515	SSF57829	Zn-binding ribosomal proteins
CPE3_0517	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0518	SSF52161	Ribosomal protein L13
CPE3_0519	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0520	SSF54001	Cysteine proteinases
CPE3_0521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0525	SSF100950	NagB/RpiA/CoA transferase-like
CPE3_0526	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0526	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPE3_0527	SSF53098	Ribonuclease H-like
CPE3_0528	SSF52317	Class I glutamine amidotransferase-like
CPE3_0528	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0529	SSF53448	Nucleotide-diphospho-sugar transferases
CPE3_0531	SSF53167	Purine and uridine phosphorylases
CPE3_0534	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0537	SSF52833	Thioredoxin-like
CPE3_0538	SSF158442	DsbB-like
CPE3_0539	SSF51713	tRNA-guanine transglycosylase
CPE3_0546	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
CPE3_0547	SSF52317	Class I glutamine amidotransferase-like
CPE3_0547	SSF52402	Adenine nucleotide alpha hydrolases-like
CPE3_0547	SSF54810	GMP synthetase C-terminal dimerisation domain
CPE3_0548	SSF51556	Metallo-dependent hydrolases
CPE3_0549	SSF82109	MIR domain
CPE3_0550	SSF56024	Phospholipase D/nuclease
CPE3_0552	SSF53448	Nucleotide-diphospho-sugar transferases
CPE3_0553	SSF56024	Phospholipase D/nuclease
CPE3_0554	SSF56024	Phospholipase D/nuclease
CPE3_0555	SSF53448	Nucleotide-diphospho-sugar transferases
CPE3_0556	SSF56024	Phospholipase D/nuclease
CPE3_0561	SSF51246	Rudiment single hybrid motif
CPE3_0561	SSF52440	PreATP-grasp domain
CPE3_0561	SSF56059	Glutathione synthetase ATP-binding domain-like
CPE3_0562	SSF51230	Single hybrid motif
CPE3_0563	SSF50104	Translation proteins SH3-like domain
CPE3_0563	SSF50249	Nucleic acid-binding proteins
CPE3_0564	SSF51366	Ribulose-phoshate binding barrel
CPE3_0566	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0571	SSF161098	MetI-like
CPE3_0572	SSF46785	"Winged helix" DNA-binding domain
CPE3_0572	SSF55252	C-terminal domain of arginine repressor
CPE3_0573	SSF53067	Actin-like ATPase domain
CPE3_0574	SSF53850	Periplasmic binding protein-like II
CPE3_0575	SSF53850	Periplasmic binding protein-like II
CPE3_0576	SSF53850	Periplasmic binding protein-like II
CPE3_0577	SSF53850	Periplasmic binding protein-like II
CPE3_0578	SSF161098	MetI-like
CPE3_0579	SSF161098	MetI-like
CPE3_0580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0581	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0584	SSF53784	Phosphofructokinase
CPE3_0585	SSF53474	alpha/beta-Hydrolases
CPE3_0586	SSF53784	Phosphofructokinase
CPE3_0589	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPE3_0590	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPE3_0590	SSF50677	ValRS/IleRS/LeuRS editing domain
CPE3_0590	SSF52374	Nucleotidylyl transferase
CPE3_0591	SSF53474	alpha/beta-Hydrolases
CPE3_0592	SSF51905	FAD/NAD(P)-binding domain
CPE3_0594	SSF47781	RuvA domain 2-like
CPE3_0594	SSF50249	Nucleic acid-binding proteins
CPE3_0594	SSF52113	BRCT domain
CPE3_0594	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
CPE3_0595	SSF56112	Protein kinase-like (PK-like)
CPE3_0595	SSF56436	C-type lectin-like
CPE3_0597	SSF48452	TPR-like
CPE3_0598	SSF144052	Thermophilic metalloprotease-like
CPE3_0599	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0599	SSF81923	Double Clp-N motif
CPE3_0601	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0603	SSF53383	PLP-dependent transferases
CPE3_0604	SSF143456	VC0467-like
CPE3_0605	SSF103256	Hypothetical protein TM0160
CPE3_0606	SSF100950	NagB/RpiA/CoA transferase-like
CPE3_0606	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
CPE3_0607	SSF102705	NIF3 (NGG1p interacting factor 3)-like
CPE3_0608	SSF55486	Metalloproteases ("zincins"), catalytic domain
CPE3_0609	SSF50129	GroES-like
CPE3_0610	SSF48592	GroEL equatorial domain-like
CPE3_0610	SSF52029	GroEL apical domain-like
CPE3_0610	SSF54849	GroEL-intermediate domain like
CPE3_0614	SSF52317	Class I glutamine amidotransferase-like
CPE3_0615	SSF103481	Multidrug resistance efflux transporter EmrE
CPE3_0616	SSF47781	RuvA domain 2-like
CPE3_0616	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0617	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPE3_0617	SSF52374	Nucleotidylyl transferase
CPE3_0617	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
CPE3_0619	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0620	SSF53098	Ribonuclease H-like
CPE3_0621	SSF50104	Translation proteins SH3-like domain
CPE3_0622	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CPE3_0622	SSF75217	alpha/beta knot
CPE3_0623	SSF54565	Ribosomal protein S16
CPE3_0624	SSF47446	Signal peptide-binding domain
CPE3_0624	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0625	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0626	SSF75620	Release factor
CPE3_0627	SSF143800	L28p-like
CPE3_0629	SSF51306	LexA/Signal peptidase
CPE3_0630	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPE3_0630	SSF50677	ValRS/IleRS/LeuRS editing domain
CPE3_0630	SSF52374	Nucleotidylyl transferase
CPE3_0632	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0637	SSF143597	YojJ-like
CPE3_0641	SSF50800	PK beta-barrel domain-like
CPE3_0641	SSF51621	Phosphoenolpyruvate/pyruvate domain
CPE3_0641	SSF52935	PK C-terminal domain-like
CPE3_0642	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0643	SSF56112	Protein kinase-like (PK-like)
CPE3_0644	SSF46589	tRNA-binding arm
CPE3_0644	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPE3_0644	SSF50677	ValRS/IleRS/LeuRS editing domain
CPE3_0644	SSF52374	Nucleotidylyl transferase
CPE3_0646	SSF81333	F1F0 ATP synthase subunit C
CPE3_0649	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0655	SSF51569	Aldolase
CPE3_0656	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
CPE3_0657	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
CPE3_0658	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
CPE3_0658	SSF54736	ClpS-like
CPE3_0659	SSF160369	Ribosomal protein L10-like
CPE3_0660	SSF56808	Ribosomal protein L1
CPE3_0661	SSF46906	Ribosomal protein L11, C-terminal domain
CPE3_0661	SSF54747	Ribosomal L11/L12e N-terminal domain
CPE3_0662	SSF50104	Translation proteins SH3-like domain
CPE3_0662	SSF82679	N-utilization substance G protein NusG, N-terminal domain
CPE3_0665	SSF50447	Translation proteins
CPE3_0665	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
CPE3_0665	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0667	SSF50249	Nucleic acid-binding proteins
CPE3_0669	SSF82649	SufE/NifU
CPE3_0671	SSF53271	PRTase-like
CPE3_0672	SSF53383	PLP-dependent transferases
CPE3_0673	SSF51366	Ribulose-phoshate binding barrel
CPE3_0674	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
CPE3_0675	SSF51366	Ribulose-phoshate binding barrel
CPE3_0676	SSF51366	Ribulose-phoshate binding barrel
CPE3_0677	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
CPE3_0677	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
CPE3_0678	SSF48295	TrpR-like
CPE3_0680	SSF103515	Autotransporter
CPE3_0683	SSF51569	Aldolase
CPE3_0684	SSF53633	Carbamate kinase-like
CPE3_0685	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0685	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPE3_0686	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0686	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
CPE3_0687	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0688	SSF102114	Radical SAM enzymes
CPE3_0689	SSF53383	PLP-dependent transferases
CPE3_0690	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0691	SSF53383	PLP-dependent transferases
CPE3_0692	SSF47240	Ferritin-like
CPE3_0693	SSF55205	EPT/RTPC-like
CPE3_0694	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0695	SSF103263	Chorismate synthase, AroC
CPE3_0696	SSF56796	Dehydroquinate synthase-like
CPE3_0697	SSF51569	Aldolase
CPE3_0697	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0697	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CPE3_0698	SSF56784	HAD-like
CPE3_0700	SSF56271	Pyruvoyl-dependent histidine and arginine decarboxylases
CPE3_0702	SSF51971	Nucleotide-binding domain
CPE3_0702	SSF54373	FAD-linked reductases, C-terminal domain
CPE3_0704	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0704	SSF56327	LDH C-terminal domain-like
CPE3_0705	SSF53697	SIS domain
CPE3_0706	SSF47823	lambda integrase-like, N-terminal domain
CPE3_0706	SSF56349	DNA breaking-rejoining enzymes
CPE3_0710	SSF48452	TPR-like
CPE3_0713	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0715	SSF52096	ClpP/crotonase
CPE3_0717	SSF52091	SpoIIaa-like
CPE3_0718	SSF48557	L-aspartase-like
CPE3_0719	SSF161098	MetI-like
CPE3_0719	SSF53850	Periplasmic binding protein-like II
CPE3_0720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0723	SSF103642	Sec-C motif
CPE3_0723	SSF55920	Creatinase/aminopeptidase
CPE3_0731	SSF53927	Cytidine deaminase-like
CPE3_0732	SSF47060	S15/NS1 RNA-binding domain
CPE3_0733	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
CPE3_0733	SSF50249	Nucleic acid-binding proteins
CPE3_0733	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0733	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
CPE3_0733	SSF55666	Ribonuclease PH domain 2-like
CPE3_0734	SSF140990	FtsH protease domain-like
CPE3_0734	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0735	SSF52402	Adenine nucleotide alpha hydrolases-like
CPE3_0740	SSF46589	tRNA-binding arm
CPE3_0740	SSF55681	Class II aaRS and biotin synthetases
CPE3_0741	SSF74731	Ribosomal protein L20
CPE3_0742	SSF143034	L35p-like
CPE3_0743	SSF54364	Translation initiation factor IF3, N-terminal domain
CPE3_0743	SSF55200	Translation initiation factor IF3, C-terminal domain
CPE3_0744	SSF48013	NusB-like
CPE3_0745	SSF56176	FAD-binding/transporter-associated domain-like
CPE3_0745	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
CPE3_0746	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0748	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0749	SSF47240	Ferritin-like
CPE3_0750	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
CPE3_0750	SSF51998	PFL-like glycyl radical enzymes
CPE3_0753	SSF63411	LuxS/MPP-like metallohydrolase
CPE3_0754	SSF53187	Zn-dependent exopeptidases
CPE3_0755	SSF50156	PDZ domain-like
CPE3_0755	SSF50494	Trypsin-like serine proteases
CPE3_0756	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0756	SSF52210	Succinyl-CoA synthetase domains
CPE3_0757	SSF52210	Succinyl-CoA synthetase domains
CPE3_0757	SSF56059	Glutathione synthetase ATP-binding domain-like
CPE3_0758	SSF47364	Domain of the SRP/SRP receptor G-proteins
CPE3_0758	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0761	SSF53697	SIS domain
CPE3_0761	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
CPE3_0762	SSF53738	Phosphoglucomutase, first 3 domains
CPE3_0762	SSF55957	Phosphoglucomutase, C-terminal domain
CPE3_0763	SSF81301	Nucleotidyltransferase
CPE3_0763	SSF81891	Poly A polymerase C-terminal region-like
CPE3_0764	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPE3_0767	SSF103515	Autotransporter
CPE3_0768	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
CPE3_0770	SSF50249	Nucleic acid-binding proteins
CPE3_0771	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CPE3_0772	SSF63411	LuxS/MPP-like metallohydrolase
CPE3_0775	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0775	SSF55060	GHMP Kinase, C-terminal domain
CPE3_0776	SSF55653	Ribosomal protein L9 C-domain
CPE3_0776	SSF55658	L9 N-domain-like
CPE3_0777	SSF46911	Ribosomal protein S18
CPE3_0778	SSF54995	Ribosomal protein S6
CPE3_0779	SSF53178	Peptidyl-tRNA hydrolase-like
CPE3_0780	SSF50715	Ribosomal protein L25-like
CPE3_0782	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPE3_0784	SSF55681	Class II aaRS and biotin synthetases
CPE3_0787	SSF56731	DNA primase core
CPE3_0787	SSF57783	Zinc beta-ribbon
CPE3_0788	SSF48334	DNA repair protein MutS, domain III
CPE3_0788	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0788	SSF53150	DNA repair protein MutS, domain II
CPE3_0788	SSF55271	DNA repair protein MutS, domain I
CPE3_0789	SSF46600	C-terminal UvrC-binding domain of UvrB
CPE3_0789	SSF47781	RuvA domain 2-like
CPE3_0789	SSF82771	GIY-YIG endonuclease
CPE3_0792	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CPE3_0793	SSF57840	Ribosomal protein L36
CPE3_0794	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0795	SSF52833	Thioredoxin-like
CPE3_0796	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
CPE3_0796	SSF52374	Nucleotidylyl transferase
CPE3_0797	SSF50249	Nucleic acid-binding proteins
CPE3_0797	SSF55681	Class II aaRS and biotin synthetases
CPE3_0798	SSF52833	Thioredoxin-like
CPE3_0800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0801	SSF53383	PLP-dependent transferases
CPE3_0802	SSF56801	Acetyl-CoA synthetase-like
CPE3_0803	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
CPE3_0804	SSF56655	Carbohydrate phosphatase
CPE3_0805	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0805	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
CPE3_0806	SSF50324	Inorganic pyrophosphatase
CPE3_0807	SSF55811	Nudix
CPE3_0808	SSF53901	Thiolase-like
CPE3_0809	SSF81301	Nucleotidyltransferase
CPE3_0812	SSF102114	Radical SAM enzymes
CPE3_0813	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0814	SSF52091	SpoIIaa-like
CPE3_0816	SSF54913	GlnB-like
CPE3_0817	SSF54814	Prokaryotic type KH domain (KH-domain type II)
CPE3_0818	SSF51984	MurCD N-terminal domain
CPE3_0818	SSF52440	PreATP-grasp domain
CPE3_0818	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPE3_0818	SSF53623	MurD-like peptide ligases, catalytic domain
CPE3_0818	SSF56059	Glutathione synthetase ATP-binding domain-like
CPE3_0819	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
CPE3_0821	SSF54106	LysM domain
CPE3_0822	SSF51984	MurCD N-terminal domain
CPE3_0822	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPE3_0822	SSF53623	MurD-like peptide ligases, catalytic domain
CPE3_0824	SSF53244	MurD-like peptide ligases, peptide-binding domain
CPE3_0824	SSF53623	MurD-like peptide ligases, catalytic domain
CPE3_0824	SSF63418	MurE/MurF N-terminal domain
CPE3_0826	SSF48592	GroEL equatorial domain-like
CPE3_0826	SSF52029	GroEL apical domain-like
CPE3_0827	SSF56300	Metallo-dependent phosphatases
CPE3_0829	SSF50104	Translation proteins SH3-like domain
CPE3_0829	SSF50249	Nucleic acid-binding proteins
CPE3_0830	SSF53167	Purine and uridine phosphorylases
CPE3_0831	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
CPE3_0831	SSF52922	TK C-terminal domain-like
CPE3_0832	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
CPE3_0832	SSF50447	Translation proteins
CPE3_0832	SSF55186	ThrRS/AlaRS common domain
CPE3_0832	SSF55681	Class II aaRS and biotin synthetases
CPE3_0833	SSF141259	CarD-like
CPE3_0833	SSF143517	TRCF domain-like
CPE3_0833	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0834	SSF51726	UROD/MetE-like
CPE3_0835	SSF102114	Radical SAM enzymes
CPE3_0836	SSF51905	FAD/NAD(P)-binding domain
CPE3_0836	SSF54373	FAD-linked reductases, C-terminal domain
CPE3_0837	SSF48452	TPR-like
CPE3_0839	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
CPE3_0841	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
CPE3_0841	SSF54292	2Fe-2S ferredoxin-like
CPE3_0841	SSF63380	Riboflavin synthase domain-like
CPE3_0846	SSF46785	"Winged helix" DNA-binding domain
CPE3_0846	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0847	SSF56281	Metallo-hydrolase/oxidoreductase
CPE3_0848	SSF82199	SET domain
CPE3_0849	SSF49777	PEBP-like
CPE3_0853	SSF52121	Lumazine synthase
CPE3_0854	SSF142695	RibA-like
CPE3_0854	SSF55821	YrdC/RibB
CPE3_0855	SSF53597	Dihydrofolate reductase-like
CPE3_0855	SSF53927	Cytidine deaminase-like
CPE3_0856	SSF46589	tRNA-binding arm
CPE3_0856	SSF55681	Class II aaRS and biotin synthetases
CPE3_0858	SSF56784	HAD-like
CPE3_0858	SSF81653	Calcium ATPase, transduction domain A
CPE3_0858	SSF81665	Calcium ATPase, transmembrane domain M
CPE3_0860	SSF55681	Class II aaRS and biotin synthetases
CPE3_0862	SSF55120	Pseudouridine synthase
CPE3_0862	SSF55174	Alpha-L RNA-binding motif
CPE3_0863	SSF53254	Phosphoglycerate mutase-like
CPE3_0864	SSF53383	PLP-dependent transferases
CPE3_0865	SSF117916	Fe-S cluster assembly (FSCA) domain-like
CPE3_0865	SSF82649	SufE/NifU
CPE3_0866	SSF48029	FliG
CPE3_0868	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0870	SSF53448	Nucleotide-diphospho-sugar transferases
CPE3_0871	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
CPE3_0871	SSF51735	NAD(P)-binding Rossmann-fold domains
CPE3_0875	SSF53795	PEP carboxykinase-like
CPE3_0875	SSF68923	PEP carboxykinase N-terminal domain
CPE3_0876	SSF53067	Actin-like ATPase domain
CPE3_0877	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0879	SSF102735	Trigger factor ribosome-binding domain
CPE3_0879	SSF109998	Triger factor/SurA peptide-binding domain-like
CPE3_0879	SSF54534	FKBP-like
CPE3_0880	SSF52096	ClpP/crotonase
CPE3_0881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0881	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
CPE3_0882	SSF81301	Nucleotidyltransferase
CPE3_0882	SSF81891	Poly A polymerase C-terminal region-like
CPE3_0883	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0885	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0885	SSF81767	Pre-protein crosslinking domain of SecA
CPE3_0885	SSF81886	Helical scaffold and wing domains of SecA
CPE3_0886	SSF48452	TPR-like
CPE3_0888	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0889	SSF48150	DNA-glycosylase
CPE3_0891	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0893	SSF51905	FAD/NAD(P)-binding domain
CPE3_0893	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
CPE3_0894	SSF102114	Radical SAM enzymes
CPE3_0897	SSF160527	V-type ATPase subunit E-like
CPE3_0905	SSF54523	Pili subunits
CPE3_0907	SSF160246	EspE N-terminal domain-like
CPE3_0907	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0910	SSF53092	Creatinase/prolidase N-terminal domain
CPE3_0910	SSF55920	Creatinase/aminopeptidase
CPE3_0911	SSF118116	DNA mismatch repair protein MutL
CPE3_0911	SSF54211	Ribosomal protein S5 domain 2-like
CPE3_0911	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
CPE3_0912	SSF48452	TPR-like
CPE3_0916	SSF103481	Multidrug resistance efflux transporter EmrE
CPE3_0917	SSF52954	Class II aaRS ABD-related
CPE3_0917	SSF55186	ThrRS/AlaRS common domain
CPE3_0917	SSF55681	Class II aaRS and biotin synthetases
CPE3_0918	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0921	SSF52374	Nucleotidylyl transferase
CPE3_0922	SSF46600	C-terminal UvrC-binding domain of UvrB
CPE3_0922	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0923	SSF51604	Enolase C-terminal domain-like
CPE3_0923	SSF54826	Enolase N-terminal domain-like
CPE3_0924	SSF81606	PP2C-like
CPE3_0928	SSF46548	alpha-helical ferredoxin
CPE3_0928	SSF54292	2Fe-2S ferredoxin-like
CPE3_0929	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
CPE3_0929	SSF51905	FAD/NAD(P)-binding domain
CPE3_0929	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
CPE3_0930	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
CPE3_0931	SSF51556	Metallo-dependent hydrolases
CPE3_0932	SSF52833	Thioredoxin-like
CPE3_0936	SSF82171	DPP6 N-terminal domain-like
CPE3_0937	SSF103088	OmpA-like
CPE3_0938	SSF47655	STAT
CPE3_0938	SSF54106	LysM domain
CPE3_0940	SSF52833	Thioredoxin-like
CPE3_0942	SSF48592	GroEL equatorial domain-like
CPE3_0942	SSF52029	GroEL apical domain-like
CPE3_0942	SSF54849	GroEL-intermediate domain like
CPE3_0944	SSF52972	ITPase-like
CPE3_0946	SSF52141	Uracil-DNA glycosylase-like
CPE3_0947	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0950	SSF47592	SWIB/MDM2 domain
CPE3_0950	SSF56712	Prokaryotic type I DNA topoisomerase
CPE3_0950	SSF57783	Zinc beta-ribbon
CPE3_0951	SSF51395	FMN-linked oxidoreductases
CPE3_0955	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
CPE3_0956	SSF100950	NagB/RpiA/CoA transferase-like
CPE3_0957	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0957	SSF54752	RecA protein, C-terminal domain
CPE3_0958	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
CPE3_0958	SSF88946	Sigma2 domain of RNA polymerase sigma factors
CPE3_0960	SSF46992	Ribosomal protein S20
CPE3_0962	SSF52540	P-loop containing nucleoside triphosphate hydrolases
CPE3_0963	SSF48452	TPR-like
CPE3_0964	SSF46894	C-terminal effector domain of the bipartite response regulators
CPE3_0964	SSF52172	CheY-like
CPE3_0965	SSF51161	Trimeric LpxA-like enzymes
CPE3_0966	SSF48576	Terpenoid synthases
CPE3_0969	SSF69796	Thymidylate synthase-complementing protein Thy1