        hemB    1625 ..    1646 +  -2.3  -3.63694   AGGATCTCCAGAAAT           TAAAGAGGA GTTT TTCTCTATA            TTGTTAGAGCTAAAT  49 465
        greA    5250 ..    5262 +  -6.3    -3.767   ATATAGGATTGCAAA                GATAG TGT CTATC                TTTGATGAATAGATG  66 1
   CPE3_0006 NONE
        mreC NONE
   CPE3_0010   15669 ..   15682 +  -6.7  -3.43492   AGAGGTTGTTACAAT               CTGTG TTTG CACAG                TTGTAATAGGTGTCA  63 280
        rpsD   17325 ..   17352 +  -6.2  -6.34616   AAAGTTTTTTGGGAA        GAGCGTCTATTG AAAC CCTTAGGCGCTC         TTTTTTTTATTTTGA  95 59
        mviN   20012 ..   20022 +  -2.4  -2.57132   CTACTTAACTTGATA                 GCGC TAA GGGC                 ATTATGAAAAAACAA  39 103
   CPE3_0015   21304 ..   21342 + -17.8  -5.56263   TTAATCTTTCTTTAA   CTAAAGAGCTCACGTTTT TTA AAAATGTGAGCTTTTTAG   TTTTTATTTTATAAT 100 53
   CPE3_0016   23288 ..   23309 + -10.3  -4.00683   CTTAGCTAGATAAAA           TACATACCT ATCC AGGTATGTA            TTTGCTTCAGTTTTT  93 32
   CPE3_0018   28786 ..   28796 +  -6.8  -5.28176   ATAGGTTAAAGGATC                 CCTC ATA GAGG                 TTTTTTATAGCTCAA  85 32
   CPE3_0019   29202 ..   29232 +  -2.6  -3.36749   ATAGAGAGGAGTTCC       TTAGCATTATGATC TGT GATGAGAATGCCAA       TTCCTCTTCCGGCTA  46 179
        hemA   38347 ..   38368 +  -3.1  -4.72486   TCATGATGTTGTTTA           TAAAAACAA GAAA TCGTTTTTA            TTTTTAAAGTTTGTG  65 240
   CPE3_0031 NONE
   CPE3_0032   41373 ..   41383 +  -2.6   -3.5032   TCTTTTGTATTTGGG                 TAAA TAG TTTA                 TGTTTAATATGGAAA  47 57
   CPE3_0033 NONE
   CPE3_0034 NONE
   CPE3_0035   42387 ..   42397 +  -2.6   -2.7924   TTTGGGTTAGTCGAA                 TATA ACA TATA                 TGGTGTCTTATGATA  42 31
   CPE3_0036 NONE
   CPE3_0037 NONE
   CPE3_0038 NONE
   CPE3_0039 NONE
   CPE3_0040 NONE
   CPE3_0041 NONE
        sctC   51239 ..   51285 +  -3.2   -5.7827   TTATTCAGGGGGAAA GCCGAGAAGAA-GGGAGTC TTGCCGTATT GACTTTCATTTTTCTTGGC TTTTTTATTTCTGTT  89 99
   CPE3_0054   61628 ..   61642 +  -2.8  -2.97475   AATTCAAAGGGAGAG               GTTTTC CTA GAGAGC               GTTTCTCCTGGCACG  43 16
   CPE3_0055   62853 ..   62874 +  -9.5  -4.78839   GCGTGATCTCTATGG           GAAGAAGGG CTGA CTCTTCTTC            TTTTCTTATGGGCTT 100 151
        sufB NONE
        sufC NONE
   CPE3_0058 NONE
   CPE3_0059   67873 ..   67894 +  -2.3  -4.40478   GGAGAGAGGTCAAAG           CGAAAAATC CCAT GAGTTTTTG            TCTTTTTTATATTTA  58 173
        parB   70484 ..   70514 +  -8.3  -3.01912   TTCTAACGACCACAG       CCTAAAGGGTCCC CTGAA GAAACCCTTTAGG       TATCTGTGGGTGTGG  68 103
   CPE3_0065 NONE
   CPE3_0066   74444 ..   74456 +  -4.1  -2.72166   TATGCTCTTTTTCTT                TGCTT TAA GAGCA                CTATTTCATTAAAAA  47 1
         pgk   75852 ..   75874 +  -7.2  -4.10934   AAAATTATCCGATTT           TGTTTTTGTT TAT AATAAAAACA           TTTCTCCTTAATTAT  75 160
   CPE3_0068 NONE
   CPE3_0069 NONE
   CPE3_0070 NONE
   CPE3_0071   80821 ..   80831 +  -6.8  -4.37658   GGATACGTATACTCA                 GCTG ATG CAGC                 TTTTGTAGGAAGGTT  74 273
   CPE3_0073   82642 ..   82656 +    -5  -5.54264   CCCCCCAGCTTACGT               TCTTCT AAG GGAAGA               TTTTTTTGAATATTT  87 146
   CPE3_0077   85803 ..   85814 +  -7.2  -4.78077   CCTTCTTCCGAGGTC                GCCC CTTT GGGC                 TTTGTTTTGATTGCA  85 294
        hisS NONE
        aspS NONE
         mip NONE
   CPE3_0083   95403 ..   95440 +  -3.5  -5.19879   ATTTTGCCTTATAAG   CTTTTTAAGCGTGTTTA CTAA TTAACTCGATTAGAAAG    TTTTTGTCTTTAAGA  71 27
   CPE3_0086 NONE
   CPE3_0087 NONE
        dnaQ   97994 ..   98020 +    -3  -4.94058   GCCAAGGTCGTACTC         TTAAAAGATCCC TTG GGAATCTCTTGA         TTTTCTTTAAATTGC  68 52
   CPE3_0089 NONE
         lnt  100194 ..  100204 +  -3.2  -4.74706   ATAATATACGGAGAC                 TCTG TGT CAGG                 TTTTTACATGTTAGA  65 37
        lpxC NONE
        fabZ NONE
        lpxA NONE
         fmt  103386 ..  103401 +  -2.6  -2.87132   TGTTTTATGGTATTA              TGATGA CTTT TCATTA               TATATACCAAGAAAG  42 87
   CPE3_0095  104390 ..  104415 + -13.5  -5.61881   TCTTGTGTTTTTTAA         CTAGCTTCTAA TTTT TTAGAAGCTAG          TTTTTATTTTTCGGA 100 60
        rplC NONE
        rplD  106032 ..  106046 +  -2.8  -3.49858   ATTAAGGGAAACTTG               GGATAT GAA AGATCC               TTATGATGTAATTAA  47 36
        rplW NONE
        rplB NONE
        rpsS  107519 ..  107531 +  -3.4  -2.88571   GTGAAAAAAGGGTAA                GTCT GAAGG AGAC                ATTATGTTTAAAGCG  44 26
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rplO NONE
        secY NONE
        rpsM NONE
        rpsK NONE
        rpoA NONE
        rplQ  116925 ..  116940 +  -2.6  -2.77781   AGTGTATTATAGAAT              TTTTAG CTAA CTAGAA               TAAATTTTGCTCCGA  42 12
        gapA NONE
   CPE3_0120  118842 ..  118869 + -10.8  -3.51232   AGTTTTAAGGGATGA        TGGTTTTTAGAT TATG GTCTAAAAACCA         TTGATTTAGAAAAAA  87 40
   CPE3_0122  120037 ..  120055 +  -2.5  -3.41393   GATAAAAGTGTATTT             CATAGAA ACTGC TTTTATG             TTGTGAATATGTGCT  47 187
        ruvC  120611 ..  120625 +  -3.6  -3.13639   TGCGAGTCTAGGGGT               GTTATA ATG TATGAC               TATATTCGTGGGATT  47 19
        ruvA NONE
         ndk  122016 ..  122027 +  -5.8   -4.7173   AAACGTTGTGTGGTG                CACC CAAC GGTG                 TTTTTGGATATACTG  75 309
   CPE3_0130  127250 ..  127260 +  -2.6  -3.02043   CGTTGTCAAGTCTTT                 TTAT TCC ATAA                 TATTCGGAAGGAGTT  43 232
   CPE3_0131  129011 ..  129032 +  -2.4  -5.54264   ATATCCTATTTTATC           TTCTTAAA AATTGA TTTAAGAG            TTTTTTTAGGTGTTT  74 125
        sohB NONE
        polA NONE
        coaE NONE
         rho  134769 ..  134790 +  -3.7  -3.50447   GATTAAGATTTCTGG           GAATATCAC AAGC GAGATGTTC            TTGTATAGGGATTGG  51 112
        pyrE  135686 ..  135698 +  -2.7   -2.5007   AGAGCTTAGAAGAAG                TAAGT TAA GCTTA                ATATTAATAACTTGC  41 18
        glgC  137210 ..  137228 +    -3  -3.15999   GACTTTTCTCTCTTT             TGTGCACG AGA CGAGCGTA             TTGCGTATCTACAGC  47 97
   CPE3_0139 NONE
   CPE3_0140  138535 ..  138546 +    -3  -3.80133   CATTATGGAGAGGCC                TCTT AGAG AAGA                 TGTTTTGTCAAAATA  52 55
   CPE3_0141  139768 ..  139786 +    -3  -4.17048   CACTGTTTTTGATAA             GGATCTCC TTG GGAGACCA             TTCTTTTCGGAAGGC  58 392
   CPE3_0143 NONE
   CPE3_0144  142188 ..  142206 + -11.8  -5.58522   TCTTTATAAAAAAAA             TAGACGAG TTC CTCGTCTA             TTTTTCTTTTCTATA 100 365
   CPE3_0145 NONE
        oppB  145944 ..  145976 +  -6.4  -5.04249   CCGAGTGCAATTTGA     TAGTAGGAGG-ATCT AAAA AGATGCCTCCTTCTG      TTTCTTTTTTCCGCA  84 10
        oppC  147912 ..  147930 +  -5.2  -4.83169   GGATCTTTAATAGAG             CGTTGAGA ATT TCCCGACG             TTTTTCTGGGAGGGT  75 237
   CPE3_0151  152781 ..  152801 +  -3.2  -3.92746   AATTCCTCCGGGATG            CCAGGGAG CGCAT TTCCCTAG            TCTTTTTAGGGTGAG  56 51
   CPE3_0155  155040 ..  155063 + -15.4  -2.73676   ACAGCTTGGATCATT          TTCCCTCCTG CATG CAGGAGGGAA           TAGCTTTGCTTTAGC 100 441
   CPE3_0161  161224 ..  161236 +  -4.1  -4.58283   AATGGTAGATTCGCT                TGCTT CGA AGGCA                TTTTTGACGAGATTC  68 274
   CPE3_0166  164058 ..  164072 +  -4.9  -3.80018   TTCAAAATGTGCTCA               GGGGG ATAGG CTCCC               TTATTGATATCTAAG  59 128
        prfB NONE
   CPE3_0172 NONE
   CPE3_0173 NONE
   CPE3_0174  170147 ..  170157 +  -6.8  -3.49209   CGTGTTGCCATTCGT                 GCAG GGC CTGC                 TTGTGGATTTGCTGT  63 385
        murA  174129 ..  174139 +  -3.2  -3.80461   TCCGTAAGGAAATGG                 GGAC AGA GTTC                 TTTAATGGTGAGTTG  53 194
   CPE3_0182 NONE
   secD/secF NONE
        recJ  186275 ..  186302 +  -8.6  -3.45776   CTAGTTTGCGTATGC        TTTCTGCCTAAT TGCA ATTAGGTAGAGA         TTATGATCACTTTGG  75 66
   CPE3_0185  187591 ..  187605 +  -4.2  -4.38744   CCCTGTATAATATTG               GGGAGG GAA CCTTTC               TTATTTTCTATGGCT  64 154
   CPE3_0186  188833 ..  188845 +  -2.7  -4.10453   ATTTTGTTAAGAAAT                CTTGA TAA TTAAG                TTTTGGGGCAGTTTA  55 137
   CPE3_0187  189741 ..  189755 +  -2.9  -2.71101   CAGCACTTAAGAGGA               TTTCT CTTGA AGAAA               TAGATTATTTCCAGG  41 200
        gltX  191795 ..  191805 +  -2.6  -4.63479   ACAAAAATGATTTGA                 TAAA TTT TTTA                 TTTTCATTTGTAATA  60 499
   CPE3_0190  192204 ..  192237 + -10.5  -3.44051   TACTTAAATTAATAG     GGTAGTTAGGAAATA GACA TACTTTCTAACTACC      TTGTACTAGTAAAAC  85 59
   CPE3_0191  194072 ..  194099 + -18.6  -5.95539   TGTATTAAAAAAGAG        CCGCCTAGAAGA GATT TCTTCTAGGCGG         TTTTTTTCTTTGCAC 100 78
   CPE3_0192  194799 ..  194821 +  -8.5  -3.53012   ATCTTTATAGGAAGA           TAAGGAGGT AATAA GCCTCCTTA           TTTAGAGGACAAAAG  77 43
   CPE3_0195  198313 ..  198324 +    -3   -3.7557   TTAAAGTTGTGTTTT                TTCT GAAA AGAA                 TATTTCATTTTTGAA  52 87
        rpsL NONE
        rpsG NONE
        fusA NONE
        rpsJ NONE
   CPE3_0200  203066 ..  203086 + -11.3  -3.05343   GAAATAGCTTGCGTA            GGCTTTAAA GAT TTTAAAGCC            TCTTCGAGATATACA  83 242
        rplU NONE
        rpmA  204531 ..  204562 +  -8.8  -5.54907   TTTAAAAAAGTAGAA      GCTCTATTTTTTGC TCAG GCATGAAATGGAGC       TTTTTGTTTTGTACA  95 66
        obgE  205637 ..  205647 +  -3.2  -3.02511   TGTGGTAATTGCAGG                 TCCT ACA GGGA                 TGTTGAGAACATAAG  45 55
        ribE NONE
   CPE3_0219 NONE
   CPE3_0220  222486 ..  222496 +    -4  -5.22006   ATATTCTGTAAACTT                 GATT TTT AATC                 TTTTTCTTGTAATGC  76 111
        lpxK NONE
        gltT NONE
   CPE3_0223  226096 ..  226113 +  -2.7  -2.71202   AAATCGTTTAGAGTC             TGTTACC ATGA GCTAACA              TGAGTTTGAGTTTTT  41 10
   CPE3_0224  227491 ..  227533 + -16.6  -3.37881   TGAAGTCCAGACTTT CCTCTCTTTATGCTTTTTCA TTG TGAAAAAGCATAAACAGCGG TTGCCTTTCTCTTCC 100 385
        glyA NONE
   CPE3_0230 NONE
        dapF  233729 ..  233760 +  -6.6  -3.07737   CTTTATTTTAGGGAT      TTTAGAGTGCAGGA TAGA TCTTGCTCTCTAAC       TACGTTTTTTTTATA  59 71
   CPE3_0232  234849 ..  234861 +  -3.5  -4.34711   TTTTTTTACAGGATT                TATTT TAT AAATA                TTTTAAATTCATTTT  60 99
   CPE3_0233  237263 ..  237273 +  -3.2  -5.04385   GTAAGCTCTACATTT                 TGTG GAG CACG                 TTTTTTAGCGATCTG  71 452
   CPE3_0250  254511 ..  254534 +  -8.8  -5.71712   AGACATATTTACAAG          CCCAGCAAGG ATCT TCATGCTGGG           TTTTTTTATATGGGG  95 73
   CPE3_0251 NONE
   CPE3_0252  255952 ..  255962 +  -3.2   -4.2649   CTGCAGAGATGTTTG                 GTTC TTC GGAC                 TTTGTGGTTTTCTTG  57 42
   CPE3_0255  259800 ..  259810 +    -4  -3.62864   ATCTTATAGAGAGAC                 GAAA CTT TTTC                 TTTCCAGTACGTTTC  54 203
   CPE3_0257 NONE
   CPE3_0258  263047 ..  263080 +  -7.4  -3.00039   ATAATTTCCTGTGGC     GCCTGCGTAGCTCA AGGAGG TGAGCTACGTCAGC      ATTTACTTGTCCATG  66 37
   CPE3_0259  264985 ..  264999 +  -5.8  -4.98758   TAACAATGTAAAGTT               TTCTTT CAA AAAGAA               TTTTTATAGATTTTT  82 329
   CPE3_0261  266854 ..  266871 +  -2.1  -3.69216   ATTAAACCTCCAAGA             GAAAACAC GCA GT-TTTTC             TATTTTAAGTAGCAC  47 278
   CPE3_0265  271680 ..  271696 +  -2.9  -4.44608   ATAGGAAATCGAAGT              GTTCCTT TAA AGGGATC              TTGTTTTTAGGTAGC  58 45
   CPE3_0266 NONE
        phnP  273301 ..  273320 +  -4.3  -2.60714   TGCATGTAGTCGTGT            GATTCCT AAGGAG AGGGATC             CTTCTCAAGCTTTAG  47 60
   CPE3_0268  274583 ..  274618 +  -4.1  -2.87683   GCAGTATGTAAGGAG    TTTCCCCTGAGGAAA AGATGA TTTTTTAAGGGGAGA     TGTCTGCGAAAGTAT  48 5
   CPE3_0269 NONE
   CPE3_0270 NONE
        glgB  279217 ..  279242 +  -2.7  -4.21343   TTTTCTGTTTTATAA         TGAAAACATAG ATGT TTATTTTTTCA          TTTCTATGTCTTCAA  55 107
   CPE3_0272  281100 ..  281115 +  -3.3  -3.95036   TAATTTTTTTAATTA              CAAAC TATCGC GTTTG               TTGTTTAAAATAATT  55 87
   CPE3_0273  282723 ..  282752 +  -4.9  -5.71712   TTGATTTAAACGATA       GGGCGTGTTTGGA GAGA TCCTGACAGGCTC        TTTTTTTGTGTGGCA  86 46
   CPE3_0274  285382 ..  285393 +  -2.2    -4.386   TTTTATAAAGGGTGT                TGCT GAAA AGCG                 TTTTGTCACAGCTTG  58 438
   CPE3_0280  300202 ..  300221 +  -2.9  -4.94058   GGCGGGCTTCTGGGT            TGTCTTT TTCTTC AAAGGCA             TTTTGTTTGGCTTCA  70 400
        gatC NONE
        gatA NONE
        gatB  326235 ..  326249 +  -3.5  -5.80727   TTTTTTATTTCTAGG               GGACT TCTTT GGTCC               TTTTTTCTTATTTTT  89 294
   CPE3_0296  331200 ..  331212 +  -2.7   -3.5241   TACGGATTTTTCCCC                TAAAG GCC CTTTG                TATTTGTACCCACTC  48 496
   CPE3_0298  333203 ..  333247 +  -6.5  -6.13503   GAGTTTTTTAGGTCA AACCCTAAGTATCCTCTCT ACCCCCC AGAGGGGGTATTTAGGGCC TTTTTTTTGTTAATA 100 47
   CPE3_0299  334321 ..  334335 +  -4.3  -4.09864   GGATTCAAGCTCTTA               GCATA GCAGA TATGC               TTTTCACAAATGAAT  62 96
   CPE3_0301  336581 ..  336595 +  -2.8  -4.70659   AAGAAATACCTTTCC               TCTTTG TAG CAGGGA               TTTTTCCCTGTGGAA  63 17
   CPE3_0302 NONE
        ksgA  338894 ..  338910 + -10.9   -3.0782   TTCTTTGTTCTATAA              CTCTCCA TAC TGGAGAG              TGTCTTCCGGAGTTG  83 291
        tpiA  344358 ..  344370 +  -7.7   -3.4277   AGGTGATCAAAAACT                TCTGC AGT GCAGA                TTCTGCATGTTGAAT  69 0
        secG  345026 ..  345037 +  -2.2  -3.64488   ATACAGAAGGATATA                CAGG ACTT TCTG                 TCTTTTCGGGAAATT  47 131
         def  345745 ..  345769 +  -4.3  -4.30933   AAAATAGCTTAGTAT          CCTAAAAACAC AGG GTTTTCTTAGG          TTTCTTACATTTATC  64 21
   CPE3_0319  358195 ..  358208 +  -3.8  -4.90296   TTGTGCCAGATTATC               GCAG TTGCTC CTGC                TTTTTCTAGAGTTTT  70 3
        rpsU  358547 ..  358565 +  -6.6  -3.14344   CTAAGTCTAAAGCTG             CGGCCAAG TAT CGTGGTCG             TTAATCAAAAAAATC  59 3
        dnaJ NONE
   CPE3_0322  362132 ..  362146 +  -2.1  -4.81163   AGGTCTTAACAAGGG               CGCAA AACGC TTGTG               TTTTATTAATATTTG  66 304
   CPE3_0325 NONE
        ptsH NONE
        ptsI  367781 ..  367802 +  -5.3  -4.57073   ACGTATCTATTGCTG           CA-GATTCTA AAA TAGAATCGTG           TTTTTCAGAAGACTC  70 384
   CPE3_0334  373109 ..  373120 +  -4.4  -3.03243   TTTTATGTTTATGAA                GCTT TCAA AAGC                 TATTGCGAGGTAGGT  50 82
   CPE3_0335  374925 ..  374938 +  -3.1  -2.80511   TTAAGAATCTATTTT               TTGCT CTTT AGCAG                TAATTCCCTTGTGGG  44 15
   CPE3_0336  375733 ..  375766 +  -3.5  -4.13945   AGTTGGGATAAGTAA     TTTTAATTGAAAAGTT AAT AACTTTT-ATTTAAAA     TTTTCCCATAAAAAT  57 39
        accD NONE
         dut NONE
   CPE3_0339 NONE
        ptsN  378435 ..  378456 +  -3.7   -3.4178   TTGTTGTTATGTTGA           TCTCATAGG TTCC TCTAGGAGA            TTATAGTGGCATGAT  51 92
   CPE3_0341  379624 ..  379656 +  -2.1  -4.17611   TCTTATTTTTCTTCC      CTTATCTGTGTATAA TTG TTTTATATAGTTAAG      ATTTTTTTTGTCATG  54 124
   CPE3_0342  381205 ..  381233 + -16.3  -3.93166   CTTATTAAGAAAGTA        GAAAGAAATAGCT AAC AGCTATTTCTTTC        TTGATTTTTTGAACC 100 11
        mnmA  384095 ..  384111 + -10.1  -3.61398   TCTTCAACCAGTGTG              GCGCGGA GTT TTCGCGC              TTCTTGACGGCAAGA  80 94
        lplA NONE
   CPE3_0348  389016 ..  389027 +  -4.4  -5.61596   CCATAATAGGGGGAG                TCCT TGTT AGGA                 TTTTTTTATAAGCAT  85 160
   CPE3_0349 NONE
   CPE3_0350  391564 ..  391580 +  -2.3  -4.14874   AAACCTTTAAAATCT              TTCTAAT TAA ATTAGGG              TTTTCAGAATATTCT  54 153
   CPE3_0351 NONE
   CPE3_0352  392305 ..  392327 +  -2.8  -4.53419   CTTTTTTCTAGACTT           TGCTTTTTTT AAT AAAGAAAGTG           TTTCTTCTTGTAGTA  61 89
   CPE3_0357  396893 ..  396905 +  -3.4  -3.48807   CTCCCTTTACGACTG                CTTC TCCTC GAAG                TTCTACCTTTCCTGC  49 110
        mraW  400930 ..  400942 +  -2.7  -3.60525   CTGCGAAGTTACGTT                GTTTT GAA AAAGC                TTCTGTATGAATAAA  48 3
   CPE3_0363 NONE
   CPE3_0364  403168 ..  403184 +  -3.7  -3.54459   CAAAGACGCCTTAGA              CAAAAAG AGA CGTTTTG              TTTACAAGACCTTCC  52 27
        murE NONE
   CPE3_0366  405795 ..  405811 +  -4.5  -3.90744   TGCATATGATGAGCT              TAGACTT CAA AAGTTTA              TTATTTAGGGCCAAG  59 318
        himD  406208 ..  406229 + -13.1  -3.19398   TTGGGTCTTTACATA           GCCCCTAAA CATC TTTAGGGGC            TTGACTCTAATTTTT  91 67
   CPE3_0369  407520 ..  407543 +  -3.3  -4.82901   GATAATTGTTTTTAA          GAATTATTT GTACTA AAATAGTTC           TTTTTGTAAGAGGAG  65 68
        accA NONE
   CPE3_0371  410478 ..  410504 +  -4.4  -3.53012   AAAGGCGGTCTTGTT         TTCTAGGAATCG TAG CGCTTTCAAGAA         TTTCAGGAAGAGAGG  52 83
   CPE3_0377  415173 ..  415198 +  -6.1  -3.59262   ATTGCTGCAAGATAT         CCTTTCCTGGA AGTT TCCAGTAGGGG          TTTGGAGATCTCAGG  63 481
   CPE3_0379  417758 ..  417768 +  -5.4  -5.07652   CCTGTAGGAGGACGT                 GAGA ATT TCTC                 TTTTGTTTTGGAAGA  79 290
   CPE3_0380  419209 ..  419220 +    -3  -2.81727   TCTAGACAAAACTCA                GAAA AGGA TTTC                 CTTCTTAAAGTTCTT  44 109
   CPE3_0381  421364 ..  421390 + -12.5  -3.05597   AAGCTGTCACGTATA         TTGTTTCTCCT GAAAA AGGAGAAACAA         ATTTTAAAGAGTGCG  93 106
   CPE3_0383 NONE
   CPE3_0384  423928 ..  423942 +  -5.7  -4.47707   ATGTAGAAAGATCGG               CGCAA GGATA TTGCG               TTCTTTTTCGTACAA  73 262
   CPE3_0387  426597 ..  426611 +  -7.2  -2.50991   CCGCATACAATAATC               GAAAGT GGG ACTTTC               ATGATTTATTTGGAT  60 28
   CPE3_0388  428050 ..  428093 +  -9.8  -3.58522   ATAGGCTTTCCTAAA GAATTT-AAGACAATCGCTGC ACA GCAGCGGTTATCTCGAAATTC TTTAAGGATGCTGAT  80 348
        ruvB NONE
   CPE3_0394  433504 ..  433518 +  -4.2  -3.28712   AACTTGTTTAGGTCA               GCGTGT TCT ACAAGC               TTGTCCCAGAGAAAA  51 385
   CPE3_0396  435769 ..  435791 +  -7.8  -5.88565   TATGGTGGAGTCTAG           CTTGTATGCT TGA AGCATATGAG           TTTTTTTCTTATGCG 100 42
   CPE3_0397  436352 ..  436365 +  -3.1  -3.88182   ACAAGAACAGCAATA               CGTCT GTGA AGATG                TTCCTTTTTAATTAA  52 1
   CPE3_0398  437928 ..  437938 +    -4  -5.08878   ATTGTTTTTTAATTT                 CTTA TTA TAAG                 TTTTATTTCTCTGTT  73 40
   CPE3_0399  438662 ..  438685 + -12.6  -5.85737   TAGAAATGTCTTTAA          CGGTAAAGAA GAGT TTCTTTACCG           TTTTTTTATTCATAT 100 63
   CPE3_0400 NONE
   CPE3_0401  440645 ..  440667 +  -4.2  -3.61398   TCTTTGAGGCGCTCC           TTTTCTGGAA GAG TTTCTGAAAA           TTCTTCAGGAGGAAG  54 242
        sucA NONE
        sucB  445909 ..  445936 +  -3.4  -3.80142   AGAAAGCATAGAACA        TCCCGAG-GCTCT TTT AGAGCTCTAGGAA        TTTCACTATTCTCTG  52 1
   CPE3_0413 NONE
   CPE3_0414  454544 ..  454555 +    -3  -5.52384   GTTCTCCCATTAAGA                TGAA TGCA TTCA                 TTTTTTTCGTAGAAG  77 399
        tyrS NONE
         gnd  457279 ..  457289 +    -4  -3.88015   AGGTAAGGTAATAGT                 GTTA ATC TAAC                 TTTAATACTTCTATG  55 30
   CPE3_0418  460655 ..  460673 +  -3.2  -3.31869   TTCTGAATTTAATAG             TTTCTTTC AAA GAAAAAAA             TATTGTGAATTTCTA  47 66
   CPE3_0419  462094 ..  462121 +   -20  -4.96501   AGAACGAAAGAAAAA        GCCCTGCTTCAC ATTT GTGAAGCAGGGC         TTTCTTTTTATGAAG 100 59
   CPE3_0422 NONE
   CPE3_0423 NONE
   CPE3_0424  467922 ..  467933 +  -4.4  -3.61774   AAAAGGGAGAAGGAG                TAGC TATG GCTA                 TTTCGCCATATTATG  55 23
   CPE3_0425 NONE
         dxr NONE
   CPE3_0427  472016 ..  472027 +    -3  -6.07969   TCCTAAGCAGTGAAT                GATA TAGA TATC                 TTTTTTTTGATTTTG  95 84
        smpB  475901 ..  475914 +  -5.2  -4.08557   ATTCCCTGGATTTTA               GCCC AGGCTA GGGC                TTCTTCTTTAGAAGA  65 52
   CPE3_0435  478901 ..  478924 +  -7.5  -7.14698   TTTCTGGTTTTTTTA          CG-CAGAGAG TTTGT CTCTCTGTCG          TTTTTTTTTTTTTTT 100 260
   CPE3_0436 NONE
   CPE3_0437  481342 ..  481356 +  -3.5  -6.15536   GATGATGAATAGAGA               GCAGT TTTAT GCTGC               TTTTTTTTCTTCGTT  95 29
        ychF  492610 ..  492621 +  -4.4  -3.60048   AGCAAATTTTTTTTC                TTCC CTAA GGAA                 CTTTTTTGGAAAGAA  54 112
        trxB  501335 ..  501363 +  -3.2  -4.24204   AGAAAGATTCTTAAG       CTAATGCAATAGC TGTT GCTGTAGCAT-AG        TTTTGGCTATGACTA  57 22
         lgt NONE
   CPE3_0457 NONE
      dnaA_1  507161 ..  507171 +  -6.8   -3.6968   AGCAGCAAGTGTCAC                 CCCA CTT TGGG                 TTGTTAAGATTATGC  65 152
        glgP  510444 ..  510460 +  -2.9  -3.88498   AGAGACTGGCTTTTT              GCTTTCG CAA CTAAGGC              TTTGATCTCTGCAGA  52 335
   CPE3_0464  514773 ..  514785 +  -7.7  -2.82516   TTGATAGGGACGCGC                TGGAG CAC CTCCA                TATACTCCTGGAGAA  61 170
        fabH NONE
        fabD NONE
        fabG NONE
        acpP  522646 ..  522680 +  -4.5  -3.94465   TGCAATATCTTTCAT    TGCAAAAGGGCCA-TAG ATA TTAGTGGCTCTTT-GCA    TCTTTTGCTTTTAAA  59 55
   CPE3_0479  531340 ..  531352 +  -4.1  -4.19817   AGATTTTTTGTGATT                GCTTT ATT AAGGC                TTTTACATGACTAGA  62 216
   CPE3_0480  533525 ..  533535 +    -4  -3.21912   TAGATGAGGGCTTTA                 GTTT CGG AAAC                 TTAATGGATTCGAAA  49 38
        mgtE  534952 ..  534962 +    -4  -2.95093   TTCTTTTTTAGCTAA                 TCTT ATA AAGA                 GTTTAATTAAAATCT  46 26
   CPE3_0482  536530 ..  536557 + -12.8  -3.76168   AGTACAGAGGATAAG        CAGCCATCTCCT TAAA AAGAGATGGCTG         TTGTTCAGTTATACT  95 11
   CPE3_0485  540910 ..  540926 +  -6.5  -3.46602   TTTTTAACTTTAAAA              GTCTTGC GAT GCAGGGC              TTCTGATGTACAGAC  62 97
   CPE3_0486 NONE
   CPE3_0487 NONE
   CPE3_0488  543478 ..  543488 +    -4  -3.05816   CCAATCTTAAGAGGC                 CTAA TGT TTAG                 TTCGGTAACCCATCA  47 31
   CPE3_0489  543936 ..  543956 +  -3.3  -4.56775   CTTATAAAATCAGTT            CTAACTTTT ATT AGAAGTGAG            TTTTTAGAAAAAACT  62 61
   CPE3_0490  544727 ..  544762 +  -2.7  -3.72695   ATAAAGCTCTTCTTT    TGATGTGGCATAA TTTCAAATCT TTATGGCGCATCA     TTTCATGGAGAAACT  51 95
   CPE3_0491 NONE
        gyrB NONE
        gyrA NONE
         tmk NONE
      dnaX_1  551796 ..  551809 +  -4.5  -3.92522   AGAAAAAATTAGCGC               TCCTC CATA GGGGA                TTTGTGAGGTTAACA  61 291
   CPE3_0497 NONE
   CPE3_0498  554303 ..  554315 +  -6.3  -3.63073   CATAACTTCTAAAAT                GCTTT CAA AAAGC                TTCTTAGCAAATCTA  64 29
        ubiA NONE
        ubiD  557775 ..  557785 +  -3.2  -4.18494   GCCTTCCATTGATCA                 CTTC ATG GAGG                 TTTTCAATAGCAATG  58 55
   CPE3_0508  561268 ..  561279 +    -3   -3.6053   TTTGTAATCGAACGG                TTGA GGGT TCAA                 TTCCTTTCTCCAGCA  50 135
   CPE3_0511 NONE
   CPE3_0512 NONE
   CPE3_0513  564061 ..  564086 +  -6.2  -5.60993   ATCCTTTGACTGCGG         TCTCCCAG GGTCTATCAA CTGGGAGA          TTTTTTTATCACGCG  88 32
        rpmG NONE
   CPE3_0516 NONE
   CPE3_0517  567925 ..  567936 +  -2.2  -5.01732   AGGGGAGTATTATTA                GAGG ACGC CTTC                 TTTTTTAAGAGAGTT  65 6
        rplM NONE
        rpsI  568964 ..  568993 + -12.3  -5.43866   TTGTTCTATTGTTTT       GCAAAGCCTTTCT TTAA AGAAAGGCTTTTC        TTTTTTTGGGGATTC 100 51
   CPE3_0522  571263 ..  571287 + -10.7  -3.02511   CTCTTAAGTAGTATG          TTCCCTCGCTC TGA GAGCAGGGGAA          TGTTAAAAAACTAAC  83 68
   CPE3_0523  571907 ..  571930 +  -6.1  -3.48153   TAGCATAAAAAGAAA          GCCTCCTTTT TAACT AAAAGG-GGC          TTATAGCTTATTCCT  61 38
   CPE3_0524  573565 ..  573592 +    -5  -3.89611   ATAAAGGTGCTTTTT        CTGTTC-CTATAG ATT CTATAGGGAAAAG        TTCTGTTCTATTTTC  59 149
   CPE3_0530  579581 ..  579631 +  -7.9  -3.01712   CCTTATTTCGAAGAT TTGCTCTTTCAAGTTTAGT TTTTTCGCTACCT ACTAGACTTGAAAGAGCCA TCTTCACCAGGAAGC  66 50
   CPE3_0531  580798 ..  580812 +  -4.2  -2.62396   GCATTCAGAAGGTCA               GGAGTT CGA ATCTCC               TAGTCTCCAAACCTG  47 160
   CPE3_0534 NONE
   CPE3_0535  582669 ..  582682 +  -2.3  -3.35046   GAGATCCCTAAAAAT               GCCTG CTTA CACGC                TCTTTGCAAGGGTAA  45 363
   CPE3_0537 NONE
        dsbB  585270 ..  585284 +  -3.4  -3.74693   TCGAGAAAGGATTAA               GCCGTG GCG CGCAGC               TTTAGTAGGATAAGA  53 439
   CPE3_0540  587188 ..  587199 +  -4.4  -2.94099   TTAGAGGGGATTAAA                GCTA GGTG TAGC                 TGTGTCATAAGCAAA  47 378
   CPE3_0546 NONE
        guaA NONE
   CPE3_0548  595809 ..  595820 +  -2.2  -4.17009   TAAACACTGCATCGC                CAGC AACA GTTG                 TTCTTGTTATTGTTT  55 393
   CPE3_0552  612833 ..  612844 +  -2.2   -3.8901   CATAGAAATAAGGAT                GCTG CTTT TAGC                 TTTAATAATTTCAGA  51 493
   CPE3_0555  626283 ..  626299 +  -2.3  -3.73775   TTGTTTCAAAGAACT              TCTTTAT GAA ATCAAGA              TTTGCTGCGGATAAA  49 281
        incA  636261 ..  636282 + -10.9  -5.69793   TCTTTTTTTGCAATA           GGCGAGAGA GTTT TTTCTCGCC            TTTTTTATTTCCTCT 100 57
   CPE3_0566  637143 ..  637171 +  -9.1  -5.14563   CTTATGATTTCAAGC        GTTAAAACCAATT AAA AATTAGTTTTAAC        TTTTTTAGTAAAAAA 100 11
   CPE3_0567 NONE
   CPE3_0568  641968 ..  641991 +  -5.5  -4.18018   TCTATGTTAATTAAT          TTAATTTCA TTAATT TGAAATTAA           TTTTACATAGAGGAA  66 60
   CPE3_0569  643684 ..  643700 +  -4.3  -5.50499   TAAGCACTATCCTTT              GCCTCCT GAG GGGAGAC              TTTTTTTACATGTAC  85 413
   CPE3_0573 NONE
   CPE3_0574 NONE
   CPE3_0575  649505 ..  649524 +  -6.5  -2.90075   TTGTAGAGGATTTAG            GAAAGAG CTAATA CTCTTTC             TCTAGTTAAAAAACC  58 15
   CPE3_0576  650936 ..  650953 +  -2.6  -2.78384   ACTTTTTTCGTTGAA             GCGAGG TAATCT CCTCGA              TATACTAGGAAAAGC  42 74
   CPE3_0577  652758 ..  652774 +  -3.7  -5.10767   GCAAAATAACAATTC              TCCTTCT TTA AGAAGCA              TTTTTGTATTGAATC  73 43
   CPE3_0578 NONE
   CPE3_0579 NONE
   CPE3_0580 NONE
   CPE3_0581 NONE
   CPE3_0582 NONE
   CPE3_0583  658915 ..  658940 +  -4.1  -3.91716   CTAATATAGAAATCA         TGA-AATCCCCT GAA AAGGGATTCTCA         TTGTTTCAAAAATAG  59 32
   CPE3_0584 NONE
   CPE3_0585 NONE
   CPE3_0586  663561 ..  663573 +  -3.4  -2.94416   ATACTTTTCCCTTAT                GAAC TAGAT GTTC                TCTCTCCTCAACATG  44 395
   CPE3_0591  668430 ..  668441 +  -5.8  -3.27029   AATTTAAAAAATAAA                GTGG AAAT CCAC                 TCTTGATTCCTCGCA  59 50
   CPE3_0592  670059 ..  670077 +  -3.8   -5.3689   CGTTGATAAAATCTC             GTTTCTCC GTT GAAGAAGC             TTTTGTTTTCTTTCT  80 68
   CPE3_0598  682738 ..  682756 +  -6.1  -2.56596   CAGTTAACCTTACGT             TTCTTAC TATCT GTAAGAA             TCCCTTCGTCAAAAA  53 523
   CPE3_0607 NONE
        pepF NONE
       groES NONE
   CPE3_0610  695478 ..  695512 + -12.4  -4.69549   TGCTTTTACTACAAA     GGTCTCTTTTCTTT CTCTTTT GAAGAAAAGAGACC     TTTTCGTTTTGAATT 100 60
   CPE3_0611  696465 ..  696491 +  -4.4  -2.60075   AGTAGCTCAGCGGTA         GAGCAGTGGACT GTT AATCCATTGGTC         GTTGGTTCGAACCCA  47 140
   CPE3_0613  697827 ..  697839 +  -4.8  -2.72144   TGTGAGGGCCAGAAA                GGAC CGCAA GTCC                CTTTCCAAAACGTCG  48 172
   CPE3_0615 NONE
   CPE3_0616  702308 ..  702334 +  -6.6   -4.0371   ACATGCACTGCGCAA         GCTATATCTTTC ATA GCAAGATTTAGC         TTTGTCTACCAAGTC  69 437
   CPE3_0628  711658 ..  711669 +  -2.2  -5.01422   TAAAGATCTGGAACT                CTCT AAGT AGGG                 TTTATTTTTCTCTAA  65 16
   CPE3_0629  714098 ..  714108 +  -3.2  -3.52919   AATATAACCAGGTTG                 CGTT TGA AGCG                 TTATGGTTACATCCT  49 384
   CPE3_0631  718075 ..  718086 +  -2.2  -4.62069   CAGCAGCAGCTAGCT                CTGA GCGC TCGG                 TTTTTGACATAAACA  63 70
   CPE3_0633  720470 ..  720496 +  -3.1  -4.29139   TGTTTAGGAGTACAA        GCATGAGAAAAC TCTC GATTTCT-ATGC         TTCTTTTAGCTTTGG  60 177
   CPE3_0634  722175 ..  722186 +  -5.8   -4.4078   GGATACGGAGGCACA                GCTC TCCA GAGC                 TTTTCATTACAGCGA  70 502
   CPE3_0637  725073 ..  725100 +  -2.1  -3.05022   CTATTTTCTAGGATT        TGGAAAAAGTA ATGGCG TATTTTTCCCA         TCTATGTATACAAAA  42 14
   CPE3_0638  726380 ..  726409 +  -7.3  -4.05512   TACTCTATAAATACA       CGCCTATCTCCTAA ATT TTAGGA-ATAGTCG       TTGCTTTTTTCTTAT  73 68
   CPE3_0639  726837 ..  726847 +  -5.4   -3.4582   AGTTAATAGATTCAT                 CATG TGG CATG                 TATTTCGTAAAGTAA  57 102
   CPE3_0640  728307 ..  728318 +  -4.4  -3.50572   CTTATCATAGTTCGA                CAAG ATCC CTTG                 TTCTATACCATAAAT  52 133
        uvrA  735541 ..  735555 +  -8.6  -3.06302   AAACAAACACCTCGT               GACAAG GAT CTTGTC               TTAACTCAGGATCAT  65 306
   CPE3_0653  749930 ..  749940 +  -3.2  -2.82623   GAAAAGAACTTTCTT                 TGTG CAG CACG                 TGATTCTGCAAAGCA  44 45
   CPE3_0668 NONE
   CPE3_0669  766308 ..  766326 +  -3.2  -4.42653   GTAACAAAAAGGCGC             TCTAAAAT ACT ATTTTCGA             TTTTCTGGATAGCGT  63 285
   CPE3_0687  783963 ..  783978 +  -4.8  -2.99576   CTAAGTAAGGAAAAA              CAATTT TAAA AAATTG               CTTCTTATTGACTTT  52 71
        bioB NONE
        bioF NONE
        bioD NONE
        bioA NONE
   CPE3_0692  788634 ..  788648 +  -2.9  -4.19678   CAGCTCGTGAAAAAC               TTAGA AAAAC TCTAA               TTTCTTAGACTATAA  55 11
        aroA NONE
        aroK NONE
        aroC NONE
        aroB NONE
       aroDE NONE
   CPE3_0698 NONE
   CPE3_0699 NONE
   CPE3_0700 NONE
   CPE3_0701  798490 ..  798517 + -14.4  -5.42975   CACCTCTAAATAAAA        CAAGTAAGAGAT CTTT ATCTCTTACTTG         TTTTTCTTTATATGA 100 32
   CPE3_0702  800165 ..  800177 +  -3.4  -3.02144   CGACTGCAAGCATTG                CCAT GAAAA ATGG                TGTTGAAACCAATAG  44 494
        xerD  805216 ..  805229 +  -3.9  -5.16132   AATCCCCAAAAAAAA               TCTAA AACC TTAGA                TTTTATTTTACTATG  73 336
   CPE3_0709 NONE
   CPE3_0710  807517 ..  807528 +  -4.4  -2.62545   CAGAAATCACTCTAA                TCGT TAAA ACGA                 GATTTTTAGCATGTC  47 19
   CPE3_0711 NONE
   CPE3_0712  811008 ..  811023 +  -7.6  -2.72461   TCCTAAATCATACAC              TACCTC AGTA GAGGTA               ATTTCAAAAGCCTTA  60 441
   CPE3_0717  817815 ..  817825 +  -5.4  -3.04398   CCTGGCATAATAGAA                 GAAC CGG GTTC                 ATTTTGCGGAAAAAA  52 461
   CPE3_0719  820701 ..  820712 +  -2.2  -3.04715   AATTTCTTTTTGATA                TGTC TGTA GACG                 CTTTTGCAAAAGCTC  42 139
   CPE3_0721 NONE
   CPE3_0722 NONE
         map  823793 ..  823814 +  -4.5  -5.30616   GCTCCTGACAGCGTT           CAGCA-TACA GTT TGTGCTGCTG           TTTTTCTTTAGCTAG  82 410
   CPE3_0726  825494 ..  825510 +  -2.3  -2.68823   CAACAAACCTTTAGG              TTAAATC TAG GATTTTA              GTTATGTGGACGACA  40 22
   CPE3_0727 NONE
   CPE3_0728  826587 ..  826599 +  -2.7  -2.62098   TAAAAACAATTCATA                TTCTA GTA TAGAG                GTCTTCGTTTACTTC  41 58
   CPE3_0729  827476 ..  827497 +  -5.1  -2.78395   CATCATCAGAAGTGA           GATGAGGGA CCAA TTCCTCACC            TAGTTCCTGAACCTT  50 159
        rpsO NONE
        pnpA  830678 ..  830695 +  -8.5  -6.41881   TTAAAATAAAAAAAA             GAGCTAA ATAT TTAGCTC              TTTTTTTTTCTTATG 100 56
   CPE3_0736 NONE
   CPE3_0737  837075 ..  837087 +  -6.3  -3.13403   AATCTTCGTCATCAA                TAGCT TTA AGCTA                TGTTCATCCCAAGAG  57 210
        nusB NONE
        murB  843554 ..  843575 +  -5.1  -3.81089   AGGAATGCATGAATA           GCTTTTGGG CGCT CTCTAAAGC            TTCTTGCTGTATATC  61 365
   CPE3_0751 NONE
        rmuC  851346 ..  851369 + -11.8  -2.82516   AAGCCTTCAGGTAGA          GATGCTGCAG CATT CTGTAGCATC           TCTGCTCCTGCAAAA  83 66
   CPE3_0754  855729 ..  855762 +   -17  -4.45068   CTTCTAGATCATCTA     GCTTAAGACTTGTC CTTTTA GACAAGTCTTAAGC      TTTATTCTTCAGGCT 100 20
        ftsY  860684 ..  860703 +  -5.8  -3.44801   CTGCTACTGTCAAAA            TTTTACTC ATCT GAGTAAGA             TCATTTTTTGTCAAA  59 325
   CPE3_0763  867135 ..  867151 +  -5.1   -2.8547   AAAAGGAATCTTCCT              CTTAACC AAT GGGTAAG              TATGCTGTCCCAAAT  51 21
        lpxB  868994 ..  869009 +  -3.4  -4.61566   TTTTTCCCTTTAAAG              TTAAAA AATT TTTTAA               TTTTCTACTTTAAAA  62 28
   CPE3_0765  870593 ..  870620 +  -2.8  -3.02434   AAATCAGATGTGCCA        TGAAGATTTTTT ACCT GGAAAATCTACA         TAATTTAATTCCCAT  43 70
   CPE3_0766  871777 ..  871799 +  -8.5  -3.27298   CCATATGCAAAGAAA          GAGGGAGACT AAAA AG-CTCCCTC           TTAATGCTTAGAAAA  73 14
   CPE3_0770 NONE
   CPE3_0771 NONE
   CPE3_0772  883578 ..  883610 +  -4.9  -2.74012   CAATGATGTTAGGCA     TGTTTGCAAGGAGG GTAAGG CCTCCA-GCAGACA      TGCTTCCGATAATGA  49 182
   CPE3_0774  885642 ..  885661 +  -2.8  -4.60041   ATCACTACCTATCTC            CGCTGCAA GATC TTGCAATG             TTTTTAAAGGTAGCT  64 482
        glgA  890579 ..  890591 +  -5.5  -2.72049   CGAAACGCACATACT                GTGCG TAA CGTAC                TAATTACAGAGTCTC  49 287
   CPE3_0784  894557 ..  894567 +  -5.4  -4.32067   TTTTCACAACTTCAC                 TGAG TGA CTCA                 TTATTTTCTGGAATC  68 357
        mutS  900037 ..  900048 +  -2.2  -3.41125   CAAGAAAAAGACCAG                CAGC TTAT GTTG                 TTCTAAATATATGCG  45 8
        uvrC  902108 ..  902118 +  -5.4  -4.67556   CTTCTACGCGAACTT                 TCAC TAA GTGA                 TTTTTAGAGTCTTGT  73 281
   CPE3_0791  902906 ..  902940 +  -7.3  -4.56597   GAAGAACTAAAAGAA     GCGTTGAAAATTCTT ATGTA AAGAAATTTCAACAC     TTTTTAGCAAAGAAA  80 5
        rnpA  904551 ..  904575 +  -9.3  -4.82901   CTTCGGTATCCATTT          TTCCGCTTTCT ACA AGTAGGCGGAA          TTTTTCTGAGAGGAA 100 332
        cysS  907439 ..  907461 +  -6.2    -3.737   TCATCAAATAATAAG           GCCACCAGAG CTC CTCTGCTTGC           TTTAATAAAAGATTC  63 428
   CPE3_0799 NONE
        priA  912544 ..  912558 +  -4.2  -2.78384   TGCACAATACCCAAC               TGCTGC CTA GCAACA               TCTCCTAAGGGAGAG  48 264
   CPE3_0804  916942 ..  916952 +  -3.2  -4.09511   ACATCGGGAATACAA                 CTCT CTA AGGG                 TTTTAGGAAGCTGTT  58 110
         ppa  918699 ..  918712 +  -6.7  -3.85698   TAACCACCTCATAAA               GGAGA GTAT TCTCC                TTTATGAAGAAAAAA  66 27
   CPE3_0812  924572 ..  924591 +  -2.8  -4.19472   TGAAGCATCTTGTCA            CAGCGAAT ATAT AATTGCTG             TTTTAACATCTCTTG  57 323
   CPE3_0815 NONE
   CPE3_0816 NONE
   CPE3_0817  927330 ..  927355 + -11.3  -5.82316   CTTTGGAGTTAAAAA         GCTAAAAGAGG TTTT TCTCTTTTAGC          TTTTTTTTGCGTAAT 100 52
       groEL  938061 ..  938075 +  -2.8  -2.53392   CTGCCATTACTGTGT               TCTCTT CAA AAGTGA               TCACTTAGGGGGTTT  41 3
   CPE3_0827  939286 ..  939299 +  -3.9  -5.76633   CAAGCATAATTCCGC               TGAAA GTTC TTTCA                TTTTTTTCTCTGTCA  91 215
   CPE3_0830  940990 ..  941004 +  -5.7  -2.71144   TTGTAAGATCAATTC               TGTGG TAAAC CCACA               TGCTTCAGCAGCATC  52 52
        alaS NONE
         mfd NONE
        hemE  950005 ..  950019 +  -2.8  -3.17526   CCAACACGTTATCGC               CTATGT TCA ACATCG               ATTTTAAATTCCTAG  45 4
      hemN_1 NONE
        hemG  952942 ..  952953 +  -4.4  -4.58424   GGAAAAATACGCATC                TGCA AGAC TGCA                 TTTTATATCGTAATA  68 319
   CPE3_0838  955922 ..  955932 +  -3.2  -3.35001   ACAGATCTTTCTGTA                 CTCA GCA TGGG                 ATTTTGTATACTATG  48 125
        ygcA NONE
        yajC  957606 ..  957617 +  -5.8  -2.98457   TCATTCTCTATAATC                CCAG AAAC CTGG                 ATTGCTTTTTTATAA  57 42
        nqrF  958982 ..  959007 + -12.1  -5.93809   TAGATGATTTCGGAA         GCTAGAAAATA GCCT TATTTTCTAGC          TTTTTTTTATAGACA 100 21
        ftsK NONE
   CPE3_0847  967990 ..  968003 +  -2.4  -2.62184   CGGTATATTTTTCTC               CACT GGTAGA AGTG                TAATGTCGCAGAAGA  40 9
   CPE3_0848  968818 ..  968828 +  -8.2  -3.26834   TGTTGCCTATCAGGA                 GGGC AAG GCCC                 TTGATACTCTGCTTT  69 181
   CPE3_0852  973034 ..  973054 +  -6.1  -2.82623   CTGCACGTTCCCAAG            CTGTTGCAG GGT CTGGAGCAG            TAATTATAGAAAAGG  55 149
        serS  977198 ..  977209 +  -4.4  -2.99649   GATTAGGATCAACGT                TGCA AATA TGCA                 TCTATCTGGGCATAT  50 40
   CPE3_0857  977987 ..  977997 +    -4  -4.82901   TCAGCATTATCTGTT                 CTTT TAT AAAG                 TTTTTATAGACAGGA  67 6
        cadA  980174 ..  980186 +  -7.7  -3.54741   GATACACCGTAATGC                CTCCT GCA AGGAG                TTTCCCGAAGTCATC  68 206
        birA  981878 ..  981894 +  -2.2  -4.08394   AATTCTCTATCCATA              GCAACG CTTGC CGTTGA              TTTTCACAAGAATCT  55 160
        pgmA NONE
   CPE3_0864 NONE
   CPE3_0865  985808 ..  985818 +  -2.4  -3.35224   TTGTTTACTTTTTAT                 CAGG CCG CCAG                 TGTTTCCCCAAATCT  45 101
   CPE3_0866 NONE
   CPE3_0867 NONE
   CPE3_0868 NONE
   CPE3_0869 NONE
   CPE3_0870 NONE
        gpsA NONE
   CPE3_0872  993069 ..  993085 +    -3  -3.21551   TTTGTTTTGATCTTC              GCTAAA AGAGC TTTGGC              TTGCTCCGTACTTTT  46 491
         tig 1004268 .. 1004293 +  -5.5  -3.98075   ATTTTAATGTCCAGA         CTTATTAGGTC GGCA GGCATAATAAG          TTCTTTGAGTACTAT  63 93
        clpP NONE
        clpX 1006250 .. 1006268 +  -4.6  -4.14392   ATAAGAAGAGCTCCT             GAAGCTAT AGC ATAACTTC             TTTTAGAGATTGGGA  62 11
        pcnB NONE
        engA NONE
   CPE3_0884 1009715 .. 1009739 + -10.2  -3.46813   TGAAGATATAGACAA          GAAAAGAGAT AGGGG ATCTCTTTTC          TATTCTTCCTCATTA  85 41
        trmE NONE
         nth 1017265 .. 1017279 +    -5  -3.63817   AGTGAAATTTGTTTG               CTTTCT AAG AGAGAG               ATTTTTTAAACTGTA  57 90
        brnQ NONE
   CPE3_0891 1022648 .. 1022664 +  -4.3  -3.68341   GTTTCTTTAGCTAAT              GGCATGG GGA CTAAGCC              TTCTTCAGTACAATT  54 490
        lpdA NONE
        lipA 1025284 .. 1025294 +  -3.2   -3.7347   CCACTTCACTATCAT                 GAGG TTA CTTC                 TTATTCAATGTTCAC  52 117
   CPE3_0895 NONE
   CPE3_0896 1027281 .. 1027311 +  -8.3  -3.06183   CAATAACAAAGGAGC       GGCGTTTCTCTAA AATTC TTGGAGATGCGCC       TTGAGTAGAGATGAA  68 117
   CPE3_0897 NONE
   CPE3_0898 NONE
   CPE3_0899 NONE
   CPE3_0900 1030129 .. 1030146 + -12.7  -4.68994   TCGGAGAAAAAAAAA             CTCCCCC TTTA GGGGGAG              TTTTTACCTGCTGAT 100 45
   CPE3_0912 NONE
   CPE3_0913 NONE
   CPE3_0914 NONE
   CPE3_0915 1046421 .. 1046438 +  -8.4  -3.75332   AAAGCCTCTTAAAAA             GCGGCT ATGTAC AGCCGC              TTTACATTAAGAAAT  75 39
        thrS NONE
   CPE3_0918 NONE
   CPE3_0919 NONE
   CPE3_0920 1051554 .. 1051569 +  -3.2  -3.09635   AAAAATCACTTTGAG              GAGCTT TCAA AAGCCC               TTCAATAATCAGAAT  45 2
        trpS NONE
        uvrB 1054651 .. 1054678 +  -2.8  -3.95725   GGAGGGATTCCCCCA        GGAAG-TTATTGG CTT TCTATAAGCTTCC        TTGTTCTTAAGGATT  53 86
         eno 1056031 .. 1056042 +    -3  -3.07831   TACGAAAAAATCCAT                TCTT TAAA AAGA                 GTTTGTGCTTCTTAA  45 65
   CPE3_0924 NONE
   CPE3_0925 1059883 .. 1059897 +  -2.8  -3.33744   GCGCTGTTCCTTCTT               CCTTAG ACT CTAAAG               CTTTTTGAGACAGCG  46 65
   CPE3_0927 1063162 .. 1063177 +    -4  -6.20267   TGCCAAAAGGGTTTT              TCTAAG TCCC CTTAGG               TTTTTTTCTTTTTCC  95 21
   CPE3_0933 NONE
   CPE3_0934 NONE
   CPE3_0935 1071845 .. 1071865 +  -4.7  -3.25472   TTTCATTAAAGGGAG            GTTTTCGTA TGC TGCGAAGGC            TATGTTTGGGAGTAT  54 48
        tolB NONE
   CPE3_0937 NONE
   CPE3_0938 NONE
   CPE3_0939 1075082 .. 1075099 +  -2.6  -4.67943   GGATAGGTAATTCCT             GCGACC CCTCCT GCTCGC              TTTTCTGTATTCAAC  64 329
   CPE3_0944 1079350 .. 1079360 +  -6.8  -2.91681   TTGAAATTGCTGAAT                 TGCC AAA GGCA                 TCTCTAAACTTACCA  58 155
   CPE3_0947 NONE
        rpoN 1083551 .. 1083565 +  -4.2  -3.38007   TCTAAGACCGGAATG               GGTTGC GTA GCAAAC               ATTTTGATTTCTCTA  51 123
        topA 1087390 .. 1087406 +  -5.1  -2.71712   CGCCCTTGCTAAAGA              TGCGC GAAGAAA GCGCA              CTTTAGAAGCACAGA  49 97
   CPE3_0953 NONE
   CPE3_0954 NONE
   CPE3_0955 NONE
   CPE3_0956 1092699 .. 1092716 +  -5.6   -2.7676   ACATAATAAACACCT             CTCTGT CCGTAA ACAGAG              TCCTCTTAAGCTTTC  51 249
        recA 1093857 .. 1093881 + -10.9  -4.46926   TCATAAAAGCAAAAA          GGTTTTTCTTA CGA TGAGAAAAACC          TTTTATCCTAAGCTC 100 42
        rpsT NONE
   CPE3_0961 1098425 .. 1098447 +  -9.9  -5.77632   AATGCTTTATCTAAA           CCCTGAAAG CTATA CTTTCGGGG           TTTTTTTATGATTTT 100 58
   CPE3_0964 NONE
        glmU NONE
        ispA 1104229 .. 1104243 +  -4.3   -3.5511   ACTTTATGCGCGTAC               GCTTT AATTA AAAGC               TCTTTCTGGGTGAGA  55 15
   CPE3_0969 1104582 .. 1104604 -  -2.1  -3.44284   TTGTTATCAATAAGA           CTTTTCA TTTTCCACC TGAAAAG           AAATAAAAATAACAG  45 82
   CPE3_0968 1104176 .. 1104190 -  -6.4  -3.34715   GACTCTCTCCAAATA               CGACCT TAA AGATCG               CTCAGAACTTGAAGC  59 170
   CPE3_0963 NONE
        recD 1098035 .. 1098061 -  -5.8  -3.60971   AGCGCAACTGGTAAA         CTTAGGTCAACA TGC TGCTGGCCTAGG         AGGAAAAATCGGTAC  61 364
   CPE3_0959 1095635 .. 1095645 -    -4   -2.6927   ATGCGTGACATACTA                 TTTG TGA CAAA                 AATATAAAAGAGGTC  45 142
        sigA 1093857 .. 1093881 -  -8.7   -5.1417   TCATAAAAGCAAAAA          GGTTTTTCTTA CGA TGAGAAAAACC          TTTTATCCTAAGCTC  95 53
   CPE3_0952 NONE
   CPE3_0951 1086994 .. 1087011 -    -2  -5.52384   TCCCTATGAAAAAAA             GCCTTCT AAGAA AGA-GGC             AAAGAAATCCACAAA  78 329
   CPE3_0949 1083081 .. 1083091 -  -6.8  -3.13403   TTTGCCTTACCAAGA                 GGAG TTT CTCC                 TAGGAAGAGTCTCTT  59 400
         ung NONE
   CPE3_0945 1078749 .. 1078797 -  -6.1  -5.74122   GACCACAGAAAAAAA TGCCCTAGCA-AAAGCTG-TGCA TGCCG CGCAACAGCTCAATGCTTGGGCA ATTGCCGATGATACT 100 431
   CPE3_0943 NONE
     groEL_1 1075466 .. 1075485 -  -8.6  -4.13767   GTGCTCATCCCAAAA            GCTCTTAC CAAA GCAAGAGC             TTTAAATCTTTATAA  85 52
   CPE3_0940 1074709 .. 1074725 -  -5.1  -4.13945   ATCCCTATGCCAAAA              GCACAAG AGC CTTCTGC              TCTTTTCCGATCAAG  65 75
   CPE3_0932 1067679 .. 1067710 - -16.8  -3.15427   AATATCTTCTACCAA      GGAGAGACAAAAAC TATT GTTTTCGTCTCTCC       TTGCAAACTTCTGGA 100 41
   CPE3_0931 NONE
        sdhC NONE
        sdhA NONE
        sdhB NONE
   CPE3_0926 1059486 .. 1059504 -  -3.8  -3.66256   GACATTCTTAAAATA             CTCCTCAG AAA CTCAAGAG             CTCTCCTTCCTCTCT  53 345
   CPE3_0916 1046421 .. 1046438 -  -9.1  -4.58685   AAAGCCTCTTAAAAA             GCGGCTA TGTA CAGCCGC              TTTACATTAAGAAAT  93 32
        mutL NONE
        pepP 1039456 .. 1039488 -  -3.6  -4.11092   TAACAATTAAAAAGA     TCCAGAG-TATTTTA TAAA CAAATTAACTCTGGA      GATACAGGCCTCTCC  59 4
   CPE3_0909 NONE
        gspD NONE
        gspE NONE
        gspF 1033134 .. 1033146 -  -4.9  -2.63382   TCCTACATTCATAAT                TACAA CGC TTGTA                TATTACTTGTGAGAG  50 12
   CPE3_0905 NONE
   CPE3_0904 NONE
   CPE3_0903 1031729 .. 1031744 -  -2.6  -5.02715   ATAGTAAAGTAAAAA              TATACG GCTG CATATA               GCTATTTCCCTAAAG  69 27
   CPE3_0902 1030668 .. 1030681 -  -2.5  -4.09685   GCCCACCTCGTAAAA               TAAAA TACT TTTTA                ATAGTTCATCTAAAA  55 81
   CPE3_0901 1030129 .. 1030146 - -12.7  -6.22802   TCGGAGAAAAAAAAA             CTCCCCC TTTA GGGGGAG              TTTTTACCTGCTGAT 100 64
   CPE3_0892 1022015 .. 1022029 -  -6.4  -4.24294   ATTAATCACGGAAAA               CACTCT GGA AGAGCG               CATTCACTATCTCAT  69 181
        psdD 1014176 .. 1014192 -  -3.1  -4.14318   AATACCAAAAAAAAT              CTTTAAA GTC TTTAAAA              TTCTTCTCTTTGAGA  57 20
   CPE3_0886 1012800 .. 1012810 -  -3.2  -3.41795   AAAGCCGTAGGATAA                 CTAC TAC GCAG                 CAAGTAGAGTTGTGA  48 18
        secA 1009715 .. 1009739 - -10.2  -3.69083   TGAAGATATAGACAA          GAAAAGAGAT AGGGG ATCTCTTTTC          TATTCTTCCTCATTA  86 25
   CPE3_0877 NONE
        mreB NONE
        pckA  996092 ..  996146 -  -2.5  -3.65554   TTATCTAACAAAAAC CATCATTTTTTAATTTTAAATGA AAAAACCCA TCAAAAAAAACTAAAAAATGATG ACCTTGAACTAAGTG  48 65
   CPE3_0874 NONE
   CPE3_0873  992248 ..  992260 -  -4.9  -2.90075   CCCCTGTGAACTATA                TTGTA GTG TACAA                CAAGACAAATCCTGA  49 365
   CPE3_0862 NONE
   CPE3_0861  981488 ..  981501 -  -2.3  -5.18726   CGTTCACAATAAAAA               GCTCT GTGG AGTGC                TCTGTGAAACCCTCC  71 235
   CPE3_0859  979517 ..  979554 -  -4.9  -3.34468   TCGGAACTAAAGAGA   TTAGGCTATCCCGTAAG CATA CTTACAGGAGATCATAA    AGTCAGCGCAGAAAA  53 466
        ribD NONE
   ribA/ribB NONE
        ribH  972771 ..  972783 -  -6.3  -5.09221   GAGAACAAAAAGAAA                TGCTT CAT AAGCA                ACTTATTTCTCCTGA  87 181
   CPE3_0851  970642 ..  970653 -  -2.2  -3.22223   GAATGGTATTATGAA                GGCT GCGA AACC                 ACTAAGTCCACAAGC  44 7
   CPE3_0850 NONE
   CPE3_0849  968294 ..  968326 -  -8.5  -2.89921   ATCAACGCCTACATA      GGGTATGGAGTCTTT GCT AAAGAACCTATACCC      TCCTGGACCTACCTA  64 363
   CPE3_0837  952650 ..  952660 -  -2.4  -3.53224   TATCCTCTCTTTAAA                 GGTG AGG CCCC                 GAAGATAGTGCCTCT  47 10
         tkt  940888 ..  940913 -  -4.7  -3.06798   TAAACACCATAGAGA         CCTCCCCCA TATGGAGC TAGGAGAGG          CAGATGACACCATGG  50 69
         efp NONE
   CPE3_0828  938769 ..  938779 -    -4   -3.1355   CCTACTCACATCTAA                 GAAA AAA TTTC                 ATACTCTTCTAAACA  49 337
        murF NONE
        mraY NONE
        murD NONE
   CPE3_0821 NONE
        ftsW NONE
        murG NONE
        murC  927330 ..  927355 - -10.6  -4.65895   CTTTGGAGTTAAAAA         GCTAAAAGAG GTTTTT CTCTTTTAGC          TTTTTTTTGCGTAAT 100 21
   CPE3_0814 NONE
        miaA  924231 ..  924241 -    -4  -3.86346   TTATTCCTGTAGAAA                 GAAA TTC TTTC                 TTTCAGCGCATCGAG  57 49
   CPE3_0811  921383 ..  921399 -  -2.3   -3.1676   ACACACTTAGGAACA              CTCTT ATAAGGA AAGAG              TCGGTGAAGTAGAGC  44 118
   CPE3_0809 NONE
        fabF NONE
   CPE3_0807  918690 ..  918721 - -15.4  -2.72227   AATATTCTGTAACCA      CCTCATAAAGGAGA GTAT TCTCCTTTATGAAG       AAAAAAGATAGTTAT 100 18
   CPE3_0805  916501 ..  916524 -  -3.2  -3.83844   GCTAGCAACCAACAA          CACTACACAAC CCG GTTGT-TAGGG          CTAAGTCTCCCAGGA  53 353
   CPE3_0803 NONE
   CPE3_0802 NONE
       bioF1  912221 ..  912232 -  -4.4  -5.27335   TCCCGTAAATAAAAA                GCTT CAGG AAGC                 GTTAATTTTAGCTAA  81 33
   CPE3_0798  908668 ..  908683 -  -7.6   -6.5058   AGAAACAAAAAAAAA              GAGGAA TAAA TTCCTC               TTTAAAAAAATATGA 100 69
        lysS  906933 ..  906949 -  -5.9   -4.0257   GCGAAAAAGCAAGAA              CTTCCAA ATC TTGGAAA              GAGGCAGATTTCCTG  66 109
   CPE3_0795  904177 ..  904189 -  -3.3  -4.39571   TTGATAAAGGCAAAA                GAAGC AAA GCTAC                GATTGGTGACGAATA  61 22
        rpmJ NONE
        rpsN  902906 ..  902940 -  -9.5  -4.38092   GAAGAACTAAAAGAA     GCGTTGAAAATTCTT ATGTA AAGAAATTTCAACAC     TTTTTAGCAAAGAAA  93 59
   CPE3_0790  901701 ..  901715 -  -2.1   -5.4833   TTACTCAAGAAAAAA               TTCCC GGAAT AGGAA               AGGTAAAATACGAAA  78 173
        dnaG  895472 ..  895482 -  -2.6   -4.0911   GAAAATTAATAAGAA                 TTTT AAT AAAA                 GTTAAGTTATTGCAA  55 32
   CPE3_0786  895066 ..  895101 -   -12  -2.96711   TTGATAATCTAGAGA    CCTAAGAGACGATTGT TCTT ACAGCCGTCTCTTAAG     AAGATCTGAGAGACG  85 45
   CPE3_0785  894371 ..  894401 -  -9.9  -3.67134   AAACTATGCTAAGAA      CCCTTTAGGTTTCC TTAA GGAAACCT-AAGAG       ATAGAGAAGAAATTA  82 41
   CPE3_0783  889829 ..  889854 -  -6.3  -4.00756   GAGTTTATGAAAGAA         GCCATTCTCCAT GCT ATGGAAAAT-GC         GTATGCTCTCATTAT  67 467
        rplY NONE
         pth  887277 ..  887291 -  -2.2   -3.1582   TCAGTCCACTAAAAT               TATTCT CTA AAAATA               CTTATGCTGACTCAG  44 27
        rpsF  886872 ..  886883 -    -3  -2.76696   TTTCTCCTTAACAAG                TTAC TCAG GTAA                 AGAAGCGAATTCTAA  43 14
        rpsR  886610 ..  886624 -  -2.1  -2.55351   TTTCCCTACATTAAT               CTTCC CCGAC GAAAG               GCAATAGTCCTAAAA  39 6
        rplI NONE
        ispE  884818 ..  884832 -  -3.6  -4.30977   AAGAAATAAATCAAA               CCTTTT AAA AAAAAG               AAAGCCTCAAAAGTT  62 388
   CPE3_0773  883201 ..  883219 -  -5.2  -2.63479   AAGAGGCCTATATTA             GCAGGCTC CGA GAACCTGA             GTACTCTTTAGAAAC  49 220
   CPE3_0769 NONE
        plsX NONE
   CPE3_0767  871777 ..  871799 -  -8.5  -4.48299   CCATATGCAAAGAAA          GAGGGAGACT AAAA AG-CTCCCTC           TTAATGCTTAGAAAA  89 33
        glmM NONE
        glmS NONE
        tyrP NONE
   CPE3_0759  860232 ..  860245 -  -2.3  -4.40572   ATAATTCTTACAAAA               GCAGA TGGT TCAGC                AAAAGGAGGAACACT  58 168
        sucC  858280 ..  858294 -  -2.8   -3.8579   ACTTAACAACTGAAA               CATAAG CCT CCTACG               TACGACTCAAAGTGA  51 21
        sucD  857272 ..  857283 -  -2.2  -4.07246   CTATTCTAAACCAAA                GCTC CTCA GAAC                 TCCTTAACTTGAGAA  52 149
   CPE3_0755  855725 ..  855766 - -12.5  -2.63631   CCAACTTCTAGATCA TCTAGCTTAAGACTTGTCC TTTT AGACAAGTCTTAAGCTTTA  TTCTTCAGGCTTTAA  86 23
   CPE3_0753  851270 ..  851285 -  -5.4  -3.61398   CCTTCCTGTGAAGAA              GAAGAG CCCT CTCTCC               TCCCTACTCAGGACT  59 49
        nrdA NONE
        nrdB  844581 ..  844618 - -12.3  -6.20267   TTAAAAATAAAAAAA   TAAGAGGAAAGTATAAA AGCT TTCATACTTTCCTCTAA    GAACTTTCTTTTTTC 100 87
        trmB NONE
   CPE3_0746  842882 ..  842897 -    -4  -3.86346   TTAGCCCCTCATAAA              GTAAAG ACAA CCTTAC               AACACCGCATTGCCA  57 308
        infC NONE
        rpmI NONE
        rplT NONE
        pheS  839156 ..  839172 -  -4.3  -3.84389   AAGAAAACGGAAGAA              GAGGGAT TCG AACCCCC              GGACCCTTTCAGGTC  57 86
   CPE3_0738 NONE
   CPE3_0735  833566 ..  833577 -  -2.2  -4.94811   TCAAAAACAAATAAA                GTGA AGCG CCAC                 TAAGACAAGGACCTA  65 90
        ftsH  830678 ..  830695 -  -8.5  -6.34616   TTAAAATAAAAAAAA             GAGCTAA ATAT TTAGCTC              TTTTTTTTTCTTATG 100 36
   CPE3_0731 NONE
   CPE3_0730  826977 ..  827004 -  -3.4   -4.4891   TTTATTATTAGAAAA        CTCGGTGTATGGA GTT TCCTTACACTG-G        TCTCCATACAAATTC  63 360
   CPE3_0725 NONE
   CPE3_0724  823286 ..  823306 -  -2.5   -2.9838   GGGAAAAAGGAAGGA            GTGATCGAT CCA AGCAACCAC            TGGGAAGCACGCACT  43 84
       adk_1  820202 ..  820220 -  -5.2  -2.87132   GTTTCCTCTCAGACA             CCTATGGG ATG CCTACAGG             TCCCCAATTACTCAT  50 356
        fumC  817249 ..  817260 -  -3.6  -5.47218   CTGGAGTGAAAAAAA                CCCC ATTA GGAG                 ATCTCAAACGTTATC  84 141
   CPE3_0716  814153 ..  814169 -  -5.3  -2.75838   GGGAAAACGATATCA              TTAAAAA AAT TTTTTAA              CACTAAAATTCTTTA  51 44
   CPE3_0715  812245 ..  812276 -  -4.7  -5.04601   TTCATAAACTAAAAA     GAGCC--ATTGAAAA TTAA TTTTCAATTTGGCTC      TTTTTTTTAATTTAA  77 56
        ispH NONE
   CPE3_0713  810145 ..  810164 -  -4.4  -4.24786   CCGAGAAGAGAGAAA            GCAGCTTTT AGA AAAAGCT-C            AAGATCTCGTAAACA  63 464
   CPE3_0707  804525 ..  804536 -  -2.2  -4.44797   CGAGTAACAGGAAAA                GGCT CAAA AACC                 CGCCTTGTCCCTCTA  60 391
         pgi  801925 ..  801939 -  -2.1  -4.94262   CACATGAAAAACAAA               GCTAA GATCT TCAGC               GCTCTATAAACTCGA  65 428
        mdhC  800523 ..  800536 -  -2.4  -2.56596   TTCTCCATCAATCTA               GCTT AAAGTG AAGC                GACATTAGCTTTTTC  39 14
   CPE3_0703  799262 ..  799287 -  -2.5  -3.76534   TTAACAAAGGTCAAA         GGACAACTATT AGAG ATTAGCTGGCC          TCTAGATCTTGCCAT  52 412
        dapB  782236 ..  782248 -  -9.1  -2.60075   TTTTTTTTAAGCAAG                GGGTG TTA CACCC                TTGAAAGAAAGCTTT  72 4
         asd NONE
        lysC  779815 ..  779829 -  -3.6  -3.38046   TTTCCACCTTAAATA               TCTTGT TTT ACAAAA               TCGTTATGCAGCTGT  51 4
        dapA NONE
   CPE3_0682  778229 ..  778239 -  -6.8  -3.26722   TTTACAGGTATAATA                 GAGG TAA CCTC                 ATCACTTTTGGAAGC  61 318
   CPE3_0681  777097 ..  777128 -  -4.4   -5.4833   TTATCCAACAAAAAA      GGCCTTTCCTACTT AAAA AAGAGAAAAAGGCC       TACGACGATTACCTT  82 54
   CPE3_0680  774103 ..  774114 -  -4.4   -2.6342   TCCTAAAGCAATGTA                TGGA CAAC TCCA                 TAGGGTAGTTTAAAA  47 35
   CPE3_0679  773388 ..  773403 -  -6.1  -4.38774   AATATTATACTAAAA              GCCCT CTCCCC AGGGC               TTTTTAAATAAACGT  72 52
        trpR  772896 ..  772921 -  -3.9  -5.30155   TTATGAACGAAAAAA         TTATCGGGCGG ACGC CCACCAGAAAA          AGTGGCATGCTCTAG  76 89
        trpD NONE
        trpC NONE
        trpF NONE
        trpB NONE
        trpA NONE
        kynU NONE
        prsA  765700 ..  765722 -    -4  -4.25104   GTTTCTTTATCAAAA           GCTGATGGAG AAG CCCCTTCATC           AAAGTATTTTTGATG  63 505
        infA  764114 ..  764125 -  -2.2  -2.81509   GAAAACAGTTAACGA                TGCC TATA GACA                 ACTCTAGCCTTTGTA  41 7
         tuf  762592 ..  762603 -  -4.4  -4.58466   TTTACAACCATAAAA                CACT AACG AGTG                 CGGAGGGAGTCGAAC  67 151
        secE  762322 ..  762336 -  -2.1   -2.6805   TAAACATGAACTAAC               CAAAC AAAAA GCTTG               TTATACTACCCATAA  40 6
        nusG NONE
        rplK NONE
        rplA NONE
        rplJ NONE
        rplL  759520 ..  759538 -  -3.2  -5.26247   TGAAAAGAAACAAAA             CGAAAA TTTTATG TTTTCG             CTTTTATGCTACAGC  74 34
        rpoB NONE
        rpoC  751389 ..  751400 -    -3  -5.86965   AGCTATCAAAAAAAA                TGAT TACT ATCA                 AGGGAGGTTTGGTTC  89 74
         tal NONE
   CPE3_0654  749834 ..  749869 -  -9.2  -2.64099   CCTTTTCATTAGAAG    CTTCAAAAATTCCATC AGGG GATGCAATCCTTGAAG     AAGCTTTAAAAAAGT  68 63
        atpE  748350 ..  748368 -  -2.4  -3.97741   AGACAAAAAATAATA             TTGAGTCA TGA TAACTCTA             AAATTAGTTGCAGAT  52 66
   CPE3_0651 NONE
        atpA NONE
        atpB NONE
        atpD NONE
        atpI NONE
        atpK NONE
   CPE3_0645  740941 ..  740962 -  -5.1  -4.53349   TAATCATCAAAGAAA           TCGAATCCC ATTA GGCATCCGA            GAATTCATCTACTGA  69 14
        valS NONE
        pknD  734865 ..  734877 -  -9.1  -3.37091   ATTCGGAAAATCCAA                CCTGC TTT GCAGG                CTCTGCAACAACTAA  71 405
         pyk  727994 ..  728025 -    -3  -4.59773   TCTTACCCTTAAAAA      GCTACCATG-ACCTC TTA GAGGTGCCTAACAGC      TTCGTGGCTGTTTTT  65 196
        cydA NONE
        cydB  721366 ..  721382 -  -5.9  -3.23853   CTTTCTCAAGGAAGA              GAAAGCT TTG AACTTTC              ATTATTCAAACTCTG  57 363
   CPE3_0632  717816 ..  717837 -  -2.9  -4.08945   AGCAGCTTCCCAAAA           TCCAACTTG AAGC CTGGTTGGA            GACATTTGGAATAAA  57 231
        ileS  713709 ..  713720 -  -4.4  -4.58395   CTTATTTCCTAAAAA                TGAG AATC CTCA                 AAATCCACGAACTCC  67 7
        rpmE  710461 ..  710487 -  -2.3     -6.13   AGATTTAAAAAAAAA        GCTCGCCA-AAC ATAT GCTATGACGAAC         CTTTTACATGATAGA  87 54
        prfA NONE
        hemK NONE
         ffh NONE
        rpsP NONE
        trmD NONE
        rplS NONE
        rnhB NONE
         gmk NONE
   CPE3_0618 NONE
        metG  701798 ..  701814 -  -5.1  -4.86216   ACAAAAAACAACAAA              GTACAAC ACC GCTGCAC              GGGACTTGTCAAAGC  75 177
   CPE3_0614  697218 ..  697239 -  -2.9  -4.44667   CCTCCTAAGAAGAAA           TGAAGTCGA GGAG TCGTCTACA            TTAGATCGAGAAGAC  61 470
        rpiA NONE
   CPE3_0605 NONE
   CPE3_0604  688602 ..  688620 -  -2.5   -3.2032   CCTCCATACTAAAAT            TGCGCTTA TTCT TAAG-GCA             TCTTAGTTTTAATGG  45 51
        hemL NONE
   CPE3_0602 NONE
   CPE3_0601 NONE
   CPE3_0600 NONE
        clpB  682063 ..  682079 -  -2.9  -4.25104   CCTTCTCGATGAAAA              GATAGGT AAG ACCTTCC              ATCTTGCTCTAGGAG  59 191
   CPE3_0597  678969 ..  678979 -  -2.6  -4.67038   CTCCGAAAATTAAAA                 TTTT TAA AAAA                 CTCGTTTTTAAATTT  63 371
   CPE3_0596  678369 ..  678395 -  -8.2  -6.15717   GAAACACAAAAAAAA         GAATGTTAGA GAAAACT TCTAACATTC         TTTTGCTCAGGAAAC 100 74
   CPE3_0595 NONE
        ligA  674304 ..  674314 -  -2.6  -3.25192   CTTAATGTTATAATA                 TTTT TTT AAAA                 GAGAAACAATTGTAA  45 149
   CPE3_0593  669688 ..  669708 -  -5.3  -4.68511   CTCAAGATAAAGAAA            TTCAAGGCC CTG GGCCAGGAA            TGCGTGCTGCTGATA  73 298
        leuS NONE
        gseA  663209 ..  663239 -    -4  -6.25741   AAAGAACAAAAAAAA      CGGAGTGCACTGA GGAGGT TCAG-GCACCCCT       AAAACTTATACTCTT  95 243
        argR  644656 ..  644667 -  -4.4  -4.09117   TTTATTTACAAACAA                GCAT AATT ATGC                 AGTTATGCACAACTA  62 28
        glnP NONE
   CPE3_0570  643236 ..  643246 -  -3.2  -4.79657   ACAAGACCAAGAAAA                 CCAC CCT GTAG                 ACCTCTATGTCTTGC  68 72
         rpe NONE
   CPE3_0563 NONE
        accB NONE
        accC  631674 ..  631688 -  -3.6  -3.34715   TAGCCTTCTTAAAGA               CTAAGA GAT TCTTAA               CATCAAGCCCTTAGC  51 90
   CPE3_0560 NONE
   CPE3_0559 NONE
   CPE3_0558  628516 ..  628526 -  -5.4  -3.91638   AACAAAAAAAATATA                 TGCT AAC AGCA                 GCGAACTGAATATTG  63 254
   CPE3_0556  625959 ..  625969 -  -6.8  -3.97307   GCCACTGAAGAAGAA                 CGCA AGC TGCG                 AGCTGATAAAAATGT  69 112
   CPE3_0554  613864 ..  613876 -  -6.3   -4.2528   TTGCAATTTAAGAAA                TCCAT TTT ATGGA                CCAAACACTACTCAA  71 174
   CPE3_0553  612442 ..  612462 -  -9.8  -3.72765   AACTCAAACCTCAAA            CAGAAGTC GAGGG GACTTCTG            AATCAGGGAAAACTA  83 0
   CPE3_0550  598897 ..  598926 -  -5.2  -3.91897   CTGGTCAGGGAGAAA       CTAAAAAAAGAA CTAATC TTCTTCTTCTAG        ATCATCTTGCAGATG  63 8
   CPE3_0549  595702 ..  595741 - -16.6  -6.79027   TGCAAAAAAAAAAAA  CTCCCCAGGAAACAGTAA AAGA CCACTGTTTTCTGGGGAG   GGGAGTGCTAAAATA 100 49
   CPE3_0545  590663 ..  590673 -  -2.4  -4.92669   TATATAAAAAAAGAA                 CCAG GAG CAGG                 GGAAAATAAGCGATA  65 192
   CPE3_0544  589727 ..  589751 -  -9.9  -4.62163   AGAGAAAAATAGAAA          TACCCCCTCGG GAA CCTTGGGGGTA          TTAGAATAAAAAATA 100 57
   CPE3_0543  589105 ..  589116 -    -3  -3.08812   GCCTCTCTAAGAAAG                TTTC CTTT GAAA                 ATAACCAACAATACT  45 81
   CPE3_0542  587507 ..  587518 -  -4.4  -3.84639   TAACATCCATAAGAA                GCAA TAAT TTGC                 ATAAGACTTTGCCCT  57 250
   CPE3_0541  586575 ..  586593 -  -3.8  -3.32963   ATTCGGATTCTAGAA             GCAATGAA AGC TCCCTTGC             ACCCCAAAGACCGTT  49 238
         tgt  584699 ..  584728 -  -2.9  -3.88498   TTGCCATATACCAAA       TCTGCCTTC-AGGA AAT CCCTGGAATGCAAA       TCGATATTTGTGGAC  52 324
   CPE3_0536  582191 ..  582202 -    -3  -4.18802   ATAGATACTGTAAAA                GAAA GAAT TTTC                 ATGAATAAAGAGCAG  58 161
        kdsB NONE
        pyrG NONE
   CPE3_0527  575855 ..  575869 -  -2.8  -5.69068   CAAAAATAGAAAAAA               GTTCCT ATG AGGAAA               ATCTTCTCTAAGGGA  80 56
         zwf  574257 ..  574267 -  -5.4   -2.7395   ATAGATTCTCGAAAT                 CCTT TAT AAGG                 GCCTCCAATATCGCC  51 18
         pgl  573333 ..  573354 -    -3  -4.13767   GGCGGGAGTGCAAAA           CTCTCCAC CATCTT ATGAAGAG            GTTGTAGGATCGACG  58 141
         adk NONE
   CPE3_0520  568969 ..  568988 - -10.8  -3.53444   CTATTGTTTTGCAAA            GCCTTTCT TTAA AGAAAGGC             TTTTCTTTTTTTGGG  89 14
   CPE3_0514  563991 ..  564015 -  -2.8  -2.82942   TTCATTAAGAAATAT          GAATGGAACG TTTCG CGTGCGATTC          TTTTCCTGGAACGTA  42 85
   CPE3_0507 NONE
        surE  558865 ..  558875 -    -4  -3.51825   TTAGTTTAACCACAA                 TCAT TTT ATGA                 TAATTAAACATAAGA  51 62
   CPE3_0503  557525 ..  557536 -  -2.2   -4.5442   CTCTTAAGGAGAAAA                GAAC TTTA GTCC                 TTGTCCCGAGAGAGG  60 238
   CPE3_0500 NONE
   CPE3_0499  554059 ..  554077 -  -3.1  -4.38666   AGATTTAAAAAAACA             TCTTTCC TATGC GGAAAGT             TTGGGAGTTCTATCC  61 276
   CPE3_0496  551118 ..  551129 -  -2.2  -4.64861   TTTTCTTAAAAGAAA                GAGA GATA CCTC                 TTCCTGATCAGGAAG  63 431
   CPE3_0484 NONE
   CPE3_0483  536530 ..  536557 -   -15  -2.69813   AGTACAGAGGATAAG        CAGCCATCTCCT TAAA AAGAGATGGCTG         TTGTTCAGTTATACT  95 34
   CPE3_0478 NONE
   CPE3_0477  527177 ..  527188 -  -4.4  -2.85378   AACTAGATGATGACA                TGAG CTCC CTCA                 CACTTAATTGTTCGG  48 109
        incB NONE
        incC  525994 ..  526013 -  -3.6  -3.14053   TTAAAGCATTTAATA            TCAAGG AAGCTGGG CCTTGA             TTTTGTGCTTATTTT  47 48
   CPE3_0474 NONE
   CPE3_0473  522548 ..  522563 -    -4  -3.15249   GAGATTTCTGAGGAA              GAAGCT GAAA AACTTC               GTACTGTTGGGGATG  49 171
        recR  518704 ..  518720 -  -4.3  -3.21934   GTTTTTCCAGAAAAT              CTCCCCT GGT AGAGGGG              TTGTTTAAGAGGTAA  51 172
   CPE3_0467 NONE
   CPE3_0466 NONE
        lpxD  514580 ..  514592 -  -4.9  -5.08088   AATTCTCAATAAAAA                CATTT TAA AAATG                CTATTATTGAAACAA  77 65
        pdhA NONE
        pdhB NONE
        pdhC  509679 ..  509707 - -10.3  -2.52464   TTCGCTTTGAATGGA        GCTCTAACCATAG GCA CTATGGATGGAGC        AAATATAGAAATGGC  73 464
   CPE3_0459  506658 ..  506670 -  -4.1  -3.49516   AAGATGATATTAGAA                CCCTT TTA AAGGA                TGTTTTAGAGATTGC  52 396
   CPE3_0455 NONE
        acpS  501271 ..  501284 -  -3.1  -2.89079   AAGACAAGCATTACA               GGCAA GCCA TTACC                TCTGCAGGAACTGGG  43 71
        rpsA  498448 ..  498477 -  -4.4  -4.02535   TTATAAGTAAGGAAA       TAGAGAGAGTAT AATGAA ATACCCTCTATA        AAATTTTAATCTTCT  59 39
        nusA NONE
        infB  494516 ..  494535 -  -3.6  -3.24924   TTCCCACTCATAATA            CGCAAA CTATAATT TTTGCG             GGTGATAGATGATCT  49 12
        rbfA NONE
        truB NONE
        ribF  492157 ..  492177 -  -7.6  -3.05022   CTGCGTACAGATAGA            GGAAGAGA TTGTC TCCCTTCC            TGTTGAAGAACGTCA  62 368
   CPE3_0445 NONE
   CPE3_0444  487934 ..  487946 -  -4.9  -3.81951   TTTTATAGCACTAAA                GATTT AGA AAATC                TGAATTCTTCCTAAA  59 16
   CPE3_0443 NONE
   CPE3_0442 NONE
        malQ  484580 ..  484590 -    -4  -3.40907   GTACATTAAGAGGAA                 TCTA TAT TAGA                 TCTTTCACGATATAT  51 124
        rpmB  484225 ..  484250 -  -4.1  -3.74227   ATAAAGACATAAATA         TTCCTCTTTTT AGGA AAATAAAGGAA          GAAGACTAGAGACCT  57 31
   CPE3_0439  482470 ..  482488 -  -3.2  -3.54488   TCTTTTTAAAGAATA             TCTTTTTA ATC TAAAATGA             TTTAGGGAAAAACTC  50 17
   CPE3_0438  481020 ..  481053 -  -4.7  -6.34616   GGAAAATAAAAAAAA     TCGCCATCGATTTAA ATTG TTAAATCAAAAGCAA      GTAAAGGTGTTTCTT 100 320
   CPE3_0434 NONE
        folD NONE
        apbE  475839 ..  475850 -  -7.2  -3.06564   ACTAGAGAAAAAGAG                CGCG AGAT CGCG                 GCAGCTATGAAGCGC  63 30
        dnaN NONE
        recF  472934 ..  472963 -  -3.1  -4.67552   TTTATTAAAAAAGAA       CTGTTTTTATTCTT TCC AAGAATAAAAAT-G       TTTTATTAGAAATTA  65 85
   CPE3_0428 NONE
   CPE3_0421  463870 ..  463903 -  -9.8  -3.51442   GATAAGAATAGAACA     CTTGATAGACAG GACTTTTTAT CTGTCTATCAAG      TTTTTTTTAGACAAA  81 32
   CPE3_0420  462094 ..  462121 -   -20  -5.39681   AGAACGAAAGAAAAA        GCCCTGCTTCAC ATTT GTGAAGCAGGGC         TTTCTTTTTATGAAG 100 61
        lepA NONE
         fer  450767 ..  450780 -  -5.3  -3.63078   AAATTAATTATACAA               CTACT AACC AGTAG                AATTATAACAGTTTA  59 252
   CPE3_0410 NONE
   CPE3_0409  449157 ..  449181 -  -3.1  -3.50045   AGGGAGATACCATAA          TAAATTATT TTTTCTG AATAATTTA          AAAAAGGTAGCGATT  48 107
   CPE3_0408 NONE
        gcpE NONE
   CPE3_0406  445865 ..  445879 -  -4.2  -4.20084   ATTATCGATGGAAAA               GAAGCC GTA GGTTTC               CTTGTTAAGGTGAAA  61 88
   CPE3_0403 NONE
        hemN  440173 ..  440183 -  -3.2  -3.95535   AGAACGTGAAAAATA                 CCTC AGA GAAG                 TTGTGAGAAAGGGGC  56 276
   CPE3_0395  432670 ..  432688 -    -6   -2.9348   TTTAAATGGGATACA             GTATCACG GAG CGTTATAC             ATTCACAGAACTGCG  54 474
         dcd  430516 ..  430529 -  -5.3   -4.6391   AAGAACTATACAAAA               GGAAT AGTA ATTCC                TTGTTGCTTTTGGTA  71 2
   CPE3_0391 NONE
   CPE3_0390 NONE
   CPE3_0389  427587 ..  427599 -  -7.7  -3.70417   ACCACAGCATTTAAA                TCCCT CGT AGGGA                TGGGAGTTTCCCAGG  70 148
   CPE3_0386 NONE
   CPE3_0385  423454 ..  423480 -  -5.2  -3.17194   AGTTGTGGAAGCCAA         GCCTAAGAAA GAGGTGA TTTCTGAGGC         TGGAGATGTATTGAC  53 413
        rluC  421131 ..  421144 -  -3.7  -3.82191   GTAATTTCACAACAA               CCACC TTCG GGAGG                TTCTCCTAGCAATGC  56 180
   CPE3_0378  414613 ..  414649 -  -6.6  -3.61398   TCTGCGCCCCAAGAA   CTGCATGGGATCGC-AGA TTT CCTTGCGCCCCCA-GCAG   AAGAAAAGGGCATTC  65 83
   CPE3_0376  413043 ..  413058 -    -4  -3.08996   TATTTTGATTTAATA              TCCATG TTGT CATAGA               GGAACTCTCCAAATT  47 63
   CPE3_0375 NONE
      dnaQ_1 NONE
   CPE3_0373 NONE
   CPE3_0372  410113 ..  410130 -    -2  -4.12599   AAGAAGCTGGGAAAA             GCCTGTC TGGAG GACAG-C             TTCAGCGCTTAACGA  55 332
   CPE3_0361 NONE
   CPE3_0360  398806 ..  398818 -  -4.1  -4.78572   CTTTAAGGAAGAAAA                TGCCA ATG TAGCA                TTGCTATTGATAAGC  70 119
        dnaA NONE
   CPE3_0358  396686 ..  396708 -  -4.2  -2.72829   GAGAGCTGCTCAAAG           GAAAGAAG CCTTCAT CTTCTCTC           TCCATTTCCTTTAAC  45 91
        nqrB NONE
        nqrC NONE
        nqrD NONE
        nqrE  392206 ..  392221 -    -9  -2.55624   TTAGGAAGCAAAACC              CTCTCG TGCT CGAGAG               ATTCCCTGAAGTGTT  68 40
        clpC  383686 ..  383698 -  -3.4  -3.15249   TAGATCTTGGAGGAA                CAAG TAAGC CTTG                TTATGTTGTTGGTAA  46 331
   CPE3_0344 NONE
   CPE3_0343  381202 ..  381236 - -10.2  -4.25056   GATCTTATTAAGAAA     GTAGAAAGAAATAGCT AAC AGCTATTTCTTTCTTG     ATTTTTTGAACCACT 100 12
         rnc NONE
        radA NONE
        hemC  369669 ..  369682 -  -8.1  -2.73676   TCTAAAGTAAACCTA               CCCTC TAGA GAGGG                TTTTTTAAAAATTTT  66 94
   CPE3_0330  369188 ..  369199 -  -2.2  -3.79849   GAAGGAGATGAAGAA                CACT GCTT AGCG                 ACATCCGAAAAGAAT  50 56
        dnaX NONE
   CPE3_0328  367346 ..  367358 -  -3.3  -2.89564   TTGCGACCTTAGATA                TGGCA GTA TGCCT                GGAGCTTGCAGAGAA  43 86
   CPE3_0324 NONE
   CPE3_0323  361820 ..  361846 -  -5.9   -2.9703   ACAAAAAGAAAAACT        TCTGCAGGCAGC CAAA GCT-CTTGCAGA         TTTTTAAAGATCTTT  57 42
         lon  354693 ..  354716 -  -3.9  -3.62518   CTAAAGATCCTGAAA          TAGCTCCAGC TTTTT GC-AGAGCTA          TTTCTTAGGAAAGGC  52 23
   CPE3_0317  353794 ..  353812 -  -2.5  -2.88386   ATACTCTACAAGAAC            TTCTTCTC TACA GAGA-GAA             CGCGGCCTCGATTAT  42 37
   CPE3_0316  352758 ..  352774 -  -2.2  -5.02606   TAGGAAAGAATAAAA              GGCTGA GATCA TAAGCC              GTTACATGGTCTTTT  67 65
   CPE3_0315  351773 ..  351783 -  -5.4  -2.75992   TTTTATCTAATACTA                 TGCT CAT AGCA                 CCTACAATAACAAAG  51 73
   CPE3_0314 NONE
         maf NONE
   CPE3_0312 NONE
   CPE3_0311  345385 ..  345396 -  -7.2  -4.05446   GTGTTGAAGGAGAAA                CCCC TGAT GGGG                 AGTTGATCTTCTGTG  72 375
        xseA NONE
        xseB NONE
   CPE3_0305 NONE
         dxs  338894 ..  338910 - -10.9  -3.28712   TTCTTTGTTCTATAA              CTCTCCA TAC TGGAGAG              TGTCTTCCGGAGTTG  86 476
   CPE3_0297  330382 ..  330401 -  -2.1  -4.25104   TCGCTGTCATTAAAA            GATGTTG AAGCAG CAACTTC             CATACGTTGTTCTTG  58 401
        rnhC  329179 ..  329191 -  -2.7  -2.98122   TACCATCTAAATAAT                TTCCT GTG AAGAA                TATCAGTGTTTTATC  43 115
   CPE3_0294  328129 ..  328142 -  -3.9  -2.51045   GGACGGAGAATAGAG               CTTTT CTTA AAAAG                AGATTTTTACCGAAC  45 18
   CPE3_0293  327381 ..  327418 -  -7.1  -2.72471   TTTTTACTATAGAAG   TTC-CCACATCACAAGAG AAA CTCATAGGATGTGGAGAA   TGAATTATTTAAAAA  61 153
   CPE3_0292  326205 ..  326219 -  -5.8  -2.89683   ACGTCATTCCATAGA               TAAAGA AGC TCTTTA               TTTTTTATTTCTAGG  56 23
   CPE3_0288  322083 ..  322100 -  -4.2  -4.21792   ATAAGGTAAAAAATA             TAGGAA GTGGCA TTCCTA              TTTTAATGTGCTGGC  62 132
   CPE3_0287  317598 ..  317623 - -14.8  -2.55351   GTTTGCTATAGGAAT         GAAGAGCCCC AAGATA GGGGCTCTTC          GTCTTTTTAGAAATA  95 32
   CPE3_0286  314543 ..  314557 -  -3.6  -3.49687   AGTTCTCATAAAAAT               CTTTGA GGT TCAAAA               TTTATTTGAGCGAAT  51 115
   CPE3_0285  311666 ..  311688 -  -2.1  -4.03001   TAAAAAATTAAAATA           TTTTTCCTG ATGCA CAAAAAAAA           AAAAAAAAACAACTA  52 60
   CPE3_0284  308925 ..  308954 - -16.7  -4.98531   CTCGTAAATGAAAAA       CCCTCTTATTCTT GAAT AAGAATAAGAGGG        TTTTAAGGAAAAGAA 100 50
   CPE3_0283  305310 ..  305338 - -11.9  -3.68023   AATGCCGAAAAGGAA        CCTAAGGTAGA TATAGAG TCTACCTTAGG        AGAACACATTAGAAA  91 34
   CPE3_0282  302737 ..  302758 - -10.2  -5.14985   TCAAAGAGAGAAAAA           GATCGGCA GCTAGA TGCCGATC            TTTTAGGAGAGTTAG 100 37
   CPE3_0281  299368 ..  299378 -  -5.4  -4.05446   CCTTTTAATCATAAA                 GCAT CTC ATGC                 AAGACGTATTCATTA  63 502
   CPE3_0279  297100 ..  297122 - -12.2  -4.28049   CTTAAAATTTCAAAA           GGCTTTTTTT AGA AAAAAAAGCC           TAGGATCTAAGAATT 100 61
   CPE3_0278 NONE
   CPE3_0277  290831 ..  290848 -  -2.7  -3.08133   GATGTAGGCATGGAA             TGGGAAT GAAG ATTCCTA              CAAAGTGTTTGTATC  43 75
   CPE3_0276 NONE
   CPE3_0275  284523 ..  284535 -  -4.9  -5.01811   TCAGGAAATGAAAAA                GATTA TGA TAATC                TAAGATCTCCTCCTA  77 461
   CPE3_0264 NONE
        aroG  266845 ..  266855 -  -3.2  -3.92324   TGTTTTAACATTAAA                 CCTC CAA GAGA                 AAACACGCAGTTTTT  55 115
   CPE3_0262  266603 ..  266638 - -11.2  -4.20918   CCCAAGGTGAATAAA    GGCTCCATCTCTTGGC TCAA GCCAAGAGATGGAAGA     TTAAGAGTTATTCAA 100 33
   CPE3_0260  264628 ..  264660 - -11.3  -3.51232   TGTTGCCTAAATGAA     TCCCCCTCGCTGCG CAGCGC CGCAGCG-GGGGCA      ATATTTGCTCTGTAT  89 62
   CPE3_0256 NONE
   CPE3_0254 NONE
   CPE3_0253  255904 ..  255919 -  -4.7  -2.61004   TGATCCCCAAAAAGG              TGCAG GAGAAG CTGCA               TGTATGGAGAAGTTA  50 38
        proS  251299 ..  251319 -  -2.5  -2.55551   GACAACCGCAATTGA            GAGCATTAT AAG AAAAAGCTC            TATGAAGGTCAAGAA  41 72
        hrcA NONE
        grpE  249549 ..  249561 -  -6.3  -3.04144   TGTTCATGGTGAATA                CCTAA ATC TTAGG                GGTTATTTTCTTTAT  59 21
        dnaK  247517 ..  247546 - -12.9  -5.08824   TTCGGAGGGAAAAAA       GCTCCCTATCCCC AAGA GGGGATAGGGAAA        AAAGAGATTTATTCG 100 34
   CPE3_0245 NONE
   CPE3_0244 NONE
   CPE3_0243  244020 ..  244037 -  -3.5  -4.01369   AATAAGTGAAAAAGA             CTTCTTT CAAG AAAAAAG              AGAATAAGGGAAAAA  55 67
   CPE3_0242 NONE
   CPE3_0241 NONE
   CPE3_0240 NONE
   CPE3_0239  241891 ..  241911 -  -6.1  -2.71712   GGGGTTCCCCTAAAT            GTGATGAGA TTT TCTCACCTC            CTCACTCTGAGGAAT  55 27
        rsbV NONE
   CPE3_0237  239560 ..  239577 -  -2.7  -3.87792   AAACCAAAAAGAACA             GCGTCAT CACG ATAACAC              CCTACTGTAACTTTA  51 46
   CPE3_0236 NONE
   CPE3_0235 NONE
        ubiE  236317 ..  236336 -  -7.9  -3.67517   GATGAATAGGCGAAA            TCAGCCT ATGGTG AGGCTGA             CAGCTTATGAGAAGG  70 522
        hemD NONE
   CPE3_0227 NONE
   CPE3_0226  228363 ..  228375 -  -6.3  -3.90048   TGGTTTCTAAAAATA                CACTT GCA AAGTG                ATGAAATTGGAAACA  69 156
   CPE3_0225  227262 ..  227279 -  -8.5  -2.94298   TTATGAAAAAACTTA             TGAGAAG AAAA CTTCTCA              ATTTTGCAGAAACAA  69 305
        nrdR NONE
        dksA NONE
        lspA  218614 ..  218628 -  -2.2   -3.4252   CTCTAGTCATTAGAA               TTATTT GGA AAACAA               ACTTTATATACTATT  45 29
   CPE3_0214  217155 ..  217180 - -10.5  -4.54026   TTTTAAACAAAAGAA         GCAAAGCCTTC ATAT GAAGGCTTTGT          AAAGATAATGTAAAT 100 58
   CPE3_0213 NONE
   CPE3_0212  216315 ..  216342 -    -2  -2.85286   ATGGAAATAAAAATT        TGATCCTAGA AAGAAGAA TCCAGGATCT         TTTGAGAAGCTATGT  41 69
   CPE3_0211  213342 ..  213362 - -11.2  -5.10461   GTTAGGGAAGAAAAA            GCTGGGTT ATACA AACCCAGC            TAAAAATAGAGAAAC 100 56
   CPE3_0210  208058 ..  208086 - -10.4  -3.91908   ATATTGCGAAAAATA        GAGATGATGAGA TATCT TCTCATCGTCTC        GTTTTTTTTGGAGAG  93 135
   CPE3_0208 NONE
   CPE3_0207 NONE
   CPE3_0206  205018 ..  205035 - -11.3  -2.67803   CCCCCACCAAAGCTA             CTCCAGG GACT CCTGGAG              AGTGTCGTCAAGTGG  83 495
        ispF  202796 ..  202811 -  -7.6  -4.27617   GATATTCTAGGAAAA              GAGCAT GTTC ATGCTC               TTAAAGAAGAACAGC  79 57
   CPE3_0194  196839 ..  196854 -  -4.8  -2.81173   ATGAACTTGAGCAGA              CTTTTT CTAA AAAAAG               AAAAGCTTCCTAATC  51 66
   CPE3_0193  194799 ..  194821 -  -7.8   -3.1978   ATCTTTATAGGAAGA           TAAGGAGG TAATAAG CCTCCTTA           TTTAGAGGACAAAAG  67 23
   CPE3_0189  191034 ..  191058 -  -3.6  -4.62904   AAATATCTCGAAAAA          GCTGATCTCT GGGTA AAAGATCAGT          TTTATCTTGGCTCCA  67 291
        uppS NONE
        cdsA NONE
         cmk NONE
   CPE3_0178 NONE
        argS  173493 ..  173506 -  -3.8  -4.72272   TTCTTCCAGGAAAAA               CCTC TGCAGG GAGG                AGTTGTTATAGAGAC  67 470
   CPE3_0175  169389 ..  169408 -  -4.2  -3.74697   ACAGATAATAAAAAT            CGCACAGC TTCA GATATGCG             CATAGCAGTAAACAA  57 427
   CPE3_0170  166314 ..  166344 - -11.2   -4.7373   CCACCCTATTAAAAA       GACTTCCTCGTTAT AAG AAAACGAGGAAGAC       GCAAATTTAAAGCTA 100 67
   CPE3_0169 NONE
        ispD NONE
        truA  163613 ..  163625 -  -9.1  -3.14132   GGGTGTGGTGACGAA                CTCCC CTG GGGAG                GCTGTCATGCGTTTG  74 301
   CPE3_0165  162484 ..  162500 -  -3.7  -3.04263   ACCTTATTGCTAAGA              GTAGATT TTG AGTCTAC              CGCGTCTACCATTCC  47 119
   CPE3_0163 NONE
   CPE3_0162  160589 ..  160601 -  -4.9  -4.24342   CCCTGTACCAATAAA                GATAA GTA TTATC                CTACACTGTTGTCTT  66 408
   CPE3_0160  156751 ..  156767 -  -9.5  -4.47271   GAAACTCAAGTAAAA              CTCCTTA GTT TAAGGAG              AGCATTTCCTTTGTC  93 13
   CPE3_0158 NONE
   CPE3_0157 NONE
        recO  154250 ..  154260 -    -4  -2.52795   AATTTTCCCAAGCTA                 GAAA CAA TTTC                 TTATCTTGGCTCTTT  45 342
   CPE3_0153 NONE
   CPE3_0152  152576 ..  152594 - -13.2  -2.57881   GAATTGTCTCAGAAC             TCTCCTCC TGT GGAGGAGA             ACTCTCTTTTTCGGG  91 98
        pheT NONE
   CPE3_0149 NONE
         ada NONE
        hemH  139040 ..  139062 -  -9.2  -2.73529   CTCCATACAAATCTA           TAAACGACCT TAA AGGGCGTTTA           ATTGGGGTGTATAAG  70 370
   CPE3_0136  134680 ..  134691 -    -3  -3.90744   CTTTCTTTGAAAGAA                TAAG TCTA CTTA                 GATAGCAACTCTTGA  55 19
        dnaB  124430 ..  124444 -  -4.3  -3.04836   TATCAGCACAAATCA               TCTTG GCACG CAAGA               ATTCTTTCTTTACAG  50 178
        gidA NONE
   CPE3_0126  121543 ..  121562 -    -5   -4.5442   TCTGGAAGGAGAAAA            CGCTGTTA TGCG TAACAGAG             AGCTTATGGGAGCAA  68 209
        trxA   95366 ..   95402 - -11.2  -3.16683   ATCGTATTGTACGAA    GTTATAAGGCAAAATT ATGCA AATTTTGCCTTATAAG    CTTTTTAAGCGTGTT  87 30
        uhpC NONE
        dnaE   85038 ..   85053 -  -3.3  -2.54325   TGGTCTTAAATACAG              GAACA TGGAGT TGTTC               TAAGGGTTTTCAAGA  42 510
   CPE3_0076   83540 ..   83554 -  -2.9  -2.76492   TCACGCATGCCAAAC               CTTTT TTAAG AAAAG               TATTTGGAGATTCTC  41 16
   CPE3_0075 NONE
   CPE3_0074   82480 ..   82501 -  -6.7   -3.2234   GAGATCAAAGATACA           GAAATGATGC TGC GC-TCATTTC           GCTTCTCTCAAGATT  61 57
   CPE3_0072   80351 ..   80363 -  -4.8  -2.93252   ACTTCTGAAGAACTA                CTGC CGTGT GCAG                AGAGAGATTCTTGCC  50 370
        dppD NONE
        dppF   70483 ..   70515 -  -9.9  -2.86164   TTTCTAACGACCACA      GCCTAAAGGGTCCCC TGA AGAAACCCTTTAGGT      ATCTGTGGGTGTGGA  76 20
   CPE3_0061   68590 ..   68600 -  -5.4  -3.28712   GGCTCTTCTTGAGAA                 GAAC TTG GTTC                 TGAGGAGGCTTCTGA  55 79
   CPE3_0060   67714 ..   67732 -  -7.5  -3.28924   GATGCTGTTGCACAA             CTAAGGA GGTAA TCCTTAG             AATGACTTTCTTTTT  67 39
        ompA   56654 ..   56676 -  -9.2  -5.71712   TGCGACATAAAAAAA           CCCAGAAGAT GAG ATTTTCTGGG           CTAGAAACCAGAACA 100 90
        rpsB NONE
         tsf NONE
        pyrH NONE
         frr   53019 ..   53030 -  -2.2  -5.55769   TCCCATAAGAAAAAA                GCTC CTTA AAGC                 TTAACTTCCCTTATC  74 384
   CPE3_0045 NONE
   CPE3_0044   51345 ..   51359 -    -5   -3.2614   CAGTTGGTAGAGCAA               CACATT CGT AACGTG               TAGGTCGTCGGTTCG  54 103
   CPE3_0029 NONE
   CPE3_0028   33534 ..   33545 -    -3  -3.63515   TTTTACTCCGAATAA                GAAA TATT TTTC                 TATATTCGCTAGAAT  50 83
   CPE3_0027 NONE
   CPE3_0026   32832 ..   32858 -  -2.2  -4.40561   TTTGTTTAAAAAGAA         TTTTACGGAGAA CGT TTCTCCGAGAGA         CAGCTTTTCAGGAGA  57 44
        rluD   31731 ..   31743 -  -3.5  -3.24122   AAAAATCGAACTCAA                TAAAA TGA TTTTA                ATATTTTTTAAATAA  47 59
   CPE3_0024   31310 ..   31332 -    -7  -2.89683   AGCTCAGTGGATAGA           GCATTCGCCT TCT AAGCGAATGG           CCGCAGGTTCGAATC  62 111
        kdsA   30271 ..   30285 -  -2.8  -4.43576   ACCACACACAATAAA               TCTTGT CAT ACAGGA               AGAAGATTTAAGGAT  58 16
   CPE3_0021 NONE
        yhbG   28594 ..   28604 -  -6.8  -2.57092   AATTCTATTAATGGA                 GGGA TGT TCCC                 ACTTCAGGCGACGAT  56 490
   CPE3_0017   23369 ..   23386 -  -9.1    -5.626   TATCGCATAAAAAAA             CGCACCA CACC CGGTGCG              TTTTTTATTGGATGC 100 69
   CPE3_0013   17226 ..   17238 -  -7.7  -3.56155   GAGCAAGACCAAATA                GAAGC CCA GCTTC                CTTTGCCTATTAATG  68 146
   CPE3_0011   15427 ..   15464 - -13.1  -4.65747   TAAGTTTTAAGAAAA   CTCCCAAAG-AAAAATAG AAA CTATTTTTTCTTTGGGAA   AAGAAAGAGCTGTTT 100 39
        recC NONE
        recB    7218 ..    7237 -  -5.7  -4.38129   AGACAAGTATGAAAA            GCTCTCC CAGCTT AGAGAGC             TGTCAGAATCTATTC  70 356
   CPE3_0003    2529 ..    2571 -  -4.4  -2.88571   CCCTGTAAAGATAAG TCTAATCCCTGAGATATAA CTATTT TCATACCTC-GGGATTATA GGCGTTTTTATAAGG  48 33
        nqrA    1069 ..    1080 -  -7.2  -3.73224   TTAGTTGGCATCAAA                CGCG CGGG CGCG                 GACATGATTGTTAGC  68 90
