        hemB    1625 ..    1646 +  -2.3  -3.63694   AGGATCTCCAGAAAT           TAAAGAGGA GTTT TTCTCTATA            TTGTTAGAGCTAAAT  49 465
        greA    5249 ..    5261 +  -6.3    -3.767   ATATAGGATTGCAAA                GATAG TGT CTATC                TTTGATGAATAGATG  66 1
   CPE1_0006 NONE
        mreC NONE
   CPE1_0010   15667 ..   15680 +  -6.7  -3.43492   AGAGGTTGTTACAAT               CTGTG TTTG CACAG                TTGTAATAGGTGTCA  63 280
        rpsD   17322 ..   17349 +  -6.2  -6.55664   AAAGTTTTTTGGGAA        GAGCGTCTATTG AAAC CCTTAGGCGCTC         TTTTTTTTTATTTTG 100 58
   CPE1_0014   20010 ..   20020 +  -2.4  -2.57132   CTACTTAACTTGATA                 GCGC TAA GGGC                 ATTATGAAAAAACAA  39 103
   CPE1_0015   21302 ..   21340 + -17.8  -5.56263   TTAATCTTTCTTTAA   CTAAAGAGCTCACGTTTT TTA AAAATGTGAGCTTTTTAG   TTTTTATTTTATAAT 100 53
   CPE1_0016   23429 ..   23445 +  -9.4  -5.53991   GTATAGCATAAAAAA              CGCACC AGAGA GGTGCG              TTTTTTTACTGGATG 100 112
   CPE1_0018   28849 ..   28859 +  -6.8  -5.28176   ATGGGTTAAAGGATC                 CCTC ATA GAGG                 TTTTTTATAGCTCAA  85 32
   CPE1_0019   29265 ..   29295 +  -2.6  -3.36749   ATAGAGAGGAGTTCC       TTAGCATTATGATC CGT GATGAGAATGCCAA       TTCCTCTTCCGGCTA  46 179
        hemA   38408 ..   38429 +  -3.1  -4.72486   TCATGATGTTGTTTA           TAAAAACAA GAAA TCGTTTTTA            TTTTTAAAGTTTGTG  65 239
   CPE1_0031 NONE
   CPE1_0032   41434 ..   41444 +  -2.6   -3.5032   TCTTTTGTATTTGGG                 TAAA TAG TTTA                 TGTTTAATATGGAAA  47 57
   CPE1_0033 NONE
   CPE1_0034 NONE
   CPE1_0035   42448 ..   42458 +  -2.6   -2.7924   TTTGGGTTAGTCGAA                 TATA ACA TATA                 TGGTGTCTTATGATA  42 31
   CPE1_0036 NONE
   CPE1_0037 NONE
   CPE1_0038 NONE
   CPE1_0039 NONE
   CPE1_0040 NONE
   CPE1_0041 NONE
   CPE1_0042   51441 ..   51456 +  -7.6  -4.18115   CGTCGGTTCGATCCC              GGCTTT GGGC AAAGCC               TCTTTTTATCTTGCT  78 240
   CPE1_0054   61683 ..   61697 +  -2.8  -2.97475   AATTCAAAGGGAGAG               GTTTTC CTA GAGAGC               GTTTCTCCTGGCACG  43 16
   CPE1_0055   62908 ..   62929 +  -9.5  -4.78839   GCGTGATCTCTATGG           GAAGAAGGG CTGA CTCTTCTTC            TTTTCTTATGGGCTT 100 151
        sufB NONE
        sufC NONE
   CPE1_0058 NONE
   CPE1_0059   67928 ..   67949 +  -2.3  -4.40478   GGAGAGAGGTCAAAA           CGAAAAATC CCAT GAGTTTTTG            TCTTTTTTATATTTA  58 173
        parB   70539 ..   70569 + -12.7  -3.01912   TTCTAACGATCACAG       CCTAAAGGGTTCC CTGAA GAAACCCTTTAGG       TATCTGTGGGTGTAG  87 103
   CPE1_0065 NONE
   CPE1_0066   74499 ..   74511 +  -4.1  -2.72166   TATGCTCTTTTTCTT                TGCTT TAA GAGCA                CTATTTCATTAAAAA  47 1
         pgk   75907 ..   75929 +  -7.2  -4.10934   AAAATTATCCGATTT           TGTTTTTGTT TAT AATAAAAACA           TTTCTCCTTAATTAT  75 160
   CPE1_0068 NONE
   CPE1_0069 NONE
   CPE1_0070 NONE
   CPE1_0071   80870 ..   80880 +  -6.8  -4.37658   GGATACGTATACTCA                 GCTG ATT CAGC                 TTTTGTAGGAAGGTT  74 273
   CPE1_0073   82691 ..   82705 +    -5  -5.54264   CCCCCCAGCTTACGT               TCTTCT AAG GGAAGA               TTTTTTTGAATATTT  87 146
   CPE1_0077   85852 ..   85863 +  -7.2  -4.78077   CCTTCTTCCGAGGTC                GCCC CTTT GGGC                 TTTGTTTTGATTGCA  85 294
        hisS NONE
        aspS NONE
         mip NONE
   CPE1_0083   95449 ..   95486 +  -3.5  -5.19879   ATTTTGCCTTATAAG   CTTTTTAAGCGTGTTTA CTAA TTAACTCGATTAGAAAG    TTTTTGTCTTTAAGA  71 27
   CPE1_0086 NONE
   CPE1_0087 NONE
        dnaQ   98040 ..   98066 +    -3  -4.94058   GCCAAGGTCGTACTC         TTAAAAGATCCC TTG GGAATCTCTTGA         TTTTCTTTAAATTGC  68 52
   CPE1_0089 NONE
         lnt  100240 ..  100250 +  -3.2  -4.74706   ATAATATACGGAGAC                 TCTG TGT CAGG                 TTTTTACATGTTAGA  65 37
        lpxC NONE
        fabZ NONE
        lpxA NONE
         fmt NONE
   CPE1_0095  104433 ..  104458 + -13.5  -5.61881   TTTTGTGTTTTTTAA         CTAGCTTCTAA TTTT TTAGAAGCTAG          TTTTTATTTTTCGGA 100 60
        rplC NONE
        rplD  106075 ..  106089 +  -2.8  -3.49858   ATTAAGGGAAACTTG               GGATAT GAA AGATCC               TTATGATGTAATTAA  47 36
        rplW NONE
        rplB NONE
        rpsS  107562 ..  107574 +  -3.4  -2.88571   GTGAAAAAAGGGTAA                GTCT GAAGG AGAC                ATTATGTTTAAAGCG  44 26
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rplO NONE
        secY NONE
        rpsM NONE
        rpsK NONE
        rpoA NONE
        rplQ  116965 ..  116980 +  -2.6  -2.77781   AGTGTATTATAGAAT              TTTTAG CTAA CTAGAA               TAAATTTTGCTCCGA  42 12
        gapA NONE
   CPE1_0120  118882 ..  118909 + -10.8  -3.51232   AGTTTTAAGGGATGA        TGGTTTTTAGAT TATG GTCTAAAAACCA         TTGATTTAGAAAAAA  87 40
   CPE1_0122  120077 ..  120095 +  -2.5  -3.41393   GATAAAAGTGTATTT             CATAGAA ACTGC TTTTATG             TTGTGAATATGTGCT  47 187
        ruvC  120651 ..  120665 +  -3.6  -3.13639   TGCGAGTCTAGGAGT               GTTATA ATG TATGAC               TATATTCGTGGGATT  47 19
        ruvA NONE
         ndk  122056 ..  122067 +  -5.8   -4.7173   AAACGTTGTGTGGTG                CACC CAAC GGTG                 TTTTTGGATATACTG  75 309
   CPE1_0130  127291 ..  127301 +  -2.6  -3.02043   CGTTGTCAAGTCTTT                 TTAT TCC ATAA                 TATTCGGAAGGAGTT  43 232
   CPE1_0131  128970 ..  128989 +  -4.3  -4.26188   ATTTTTATAGGAAAG            GCTTGAG AAAATC CTTAAGC             TTTTCCCTCTGTAGA  62 43
        sohB NONE
        polA NONE
        coaE NONE
         rho  134804 ..  134825 +  -3.7  -3.50447   GATTAAGATTTCTGG           GAATATCAC AAGC GAGATGTTC            TTGTATAGGGATTGG  51 112
        pyrE  135721 ..  135733 +  -2.7   -2.5007   AGAGCTTAGAAGAAG                TAAGT TAA GCTTA                ATATTAATAACTTGC  41 18
        glgC NONE
   CPE1_0139 NONE
   CPE1_0140  138567 ..  138578 +    -3  -3.80133   CATTATGGAGAGGCC                TCTT AGAG AAGA                 TGTTTTGTCAAAATA  52 55
   CPE1_0141  139800 ..  139818 +    -3  -4.17048   CACTGTTTTTGATAA             GGATCTCC TTG GGAGACCA             TTCTTTTCGGAAGGC  58 392
   CPE1_0143 NONE
   CPE1_0144  142216 ..  142234 + -11.8  -5.58522   TTCTTTATAAAAAAA             TAGACGAG TTC CTCGTCTA             TTTTTCTTTTCTATA 100 362
   CPE1_0145 NONE
        oppB  145974 ..  146006 +  -6.4  -5.04249   CCGAGTGCAATTTGA     TAGTAGGAGG-ATCT AAAA AGATGCCTCCTTCTG      TTTCTTTTTTCCGCA  84 10
        oppC  147942 ..  147960 +  -7.4  -4.83169   GGATCTTTAATAGAG             CGTTGAGA ATT TCCCAACG             TTTTTCTGGGAGGGT  85 237
   CPE1_0151  152810 ..  152830 +  -3.2  -3.92746   AATTCCTCCGGGATG            CCAGGGAG CGCAT TTCCCTAG            TCTTTTTAGGGTGAG  56 51
   CPE1_0155  155069 ..  155092 + -15.4  -2.73676   ACAGCTTGGATCATT          TTCCCTCCTG CATG CAGGAGGGAA           TAGCTTTGCTTTAGC 100 441
   CPE1_0161  161250 ..  161262 +  -4.1  -4.58283   AATGGTAGATTCGCT                TGCTT CGA AGGCA                TTTTTGACGAGATTC  68 273
   CPE1_0166  164084 ..  164097 +  -3.8  -2.87529   TTCAAAATGTGCTCA               GGAG GATAGG CTCC                CTTATTGATATCTAA  46 128
        prfB NONE
   CPE1_0172 NONE
   CPE1_0173 NONE
   CPE1_0174  170173 ..  170183 +  -6.8  -3.40566   CGTGTTGCTAGTCTT                 GCAG GGC CTGC                 TTGTGGATCTGCTGT  63 385
        murA  174152 ..  174162 +  -3.2  -3.80461   TCCGTAAGGAAATGG                 GGAC AGA GTTC                 TTTAATGGTGAGTTG  53 194
   CPE1_0182  180158 ..  180168 +  -5.4  -6.47228   AATCCGTCCCCCTCT                 TCGT TTG ACGA                 TTTTTTTTTTAATTG  95 84
   secD/secF NONE
        recJ  186299 ..  186326 +  -8.6  -3.45776   CTAGTTTGCGTATGC        TTTCTGCCTAAT TGCA ATTAGGTAGAGA         TTATGATCACTTTGG  75 66
   CPE1_0185  187615 ..  187629 +  -4.2  -4.45187   CTCTGTATAATATTT               GGGAGG AAA CCTTTC               TTGTTTTCTATGTTT  64 154
   CPE1_0186  188767 ..  188779 +  -4.1   -3.9644   TAGCTCCATATAGTG                CTTGG TAT CTAAG                TTGTTGTCTTGCCAG  59 38
   CPE1_0187  189773 ..  189787 +  -2.9  -2.71101   CATCACTTAAGAGGA               TTTCT CTTGA AGAAA               TAGATTATTTCCAGG  41 199
        gltX  191827 ..  191837 +  -2.6  -4.63479   ACAAAAATGATTTGA                 TAAA TTT TTTA                 TTTTCATTTGTAATA  60 499
   CPE1_0190  192236 ..  192269 + -10.5  -3.44051   TACTTAAATTAATAG     GGTAGTTAGGAAATA GACA TACTTTCTAACTACC      TTGTACTAGTAAAAC  85 59
   CPE1_0191  194104 ..  194131 + -18.6  -5.95539   TGTATTAAAAAAGAG        CCGCCTAGAAGA GATT TCTTCTAGGCGG         TTTTTTTCTTTGCAC 100 78
   CPE1_0192  194840 ..  194862 +  -8.5  -3.53012   ATCTTTATAGGAAAA           TAAGGAGGT AATAA GCCTCCTTA           TTTAGAGGACAAAAG  77 43
   CPE1_0195  198354 ..  198365 +    -3   -3.7557   TTAAAGTTGTGTTTT                TTCT GAAA AGAA                 TATTTCATTTTTGAA  52 87
        rpsL NONE
        rpsG NONE
        fusA NONE
        rpsJ NONE
        cysJ  203104 ..  203124 + -11.3  -3.05343   GAAATAGCTTGCGTA            GGCTTTAAA AAT TTTAAAGCC            TCTTCGAGATATACA  83 242
        rplU NONE
        rpmA  204565 ..  204596 +  -8.8  -5.54907   TTTAAGAAAGTAGAA      GCTCTATTTTTTGC TCAG GCATGAAATGGAGC       TTTTTGTTTTGTACA  95 66
        obgE  205671 ..  205681 +  -3.2  -3.02511   TGTGGTAATTGCAGG                 TCCT ACA GGGA                 TGTTGAGAACATAAG  45 55
        ribE NONE
   CPE1_0219 NONE
   CPE1_0220  222582 ..  222592 +    -4  -5.22006   ATATTCTGTAAACTT                 GATT TTT AATC                 TTTTTCTTGTAATGC  76 112
        lpxK NONE
        gltP NONE
   CPE1_0223  226192 ..  226209 +  -2.7  -2.71202   AAATCGTTTAGAGTC             TGTTACC ATGA GCTAACA              TGAGTTTGAGTTTTT  41 10
   CPE1_0224  227586 ..  227628 + -16.6  -3.37881   TGAAGTCCAGACTTT CCTCTCTTTATGCTTTTTCA TTG TGAAAAAGCATAAACAGCGG TTGCCTTTCTCTTCC 100 385
        glyA NONE
   CPE1_0230 NONE
        dapF  233863 ..  233894 +  -6.6  -3.07737   CTTTATTTTAGGGAT      TTTAGAGTGCAGGA TAGA TCTTGCTCTCTAAC       TACGTTTTTTTTATA  59 71
   CPE1_0232  234986 ..  234996 +    -4  -4.49781   TGCTCTTTCTTTTTT                 TACA GGA TGTA                 TTTTATAAATATTTT  65 108
   CPE1_0233  237412 ..  237422 +  -3.2  -5.04385   GTAAGCTCTACATTT                 TGTG GAG CACG                 TTTTTTAGCGATCTG  71 452
   CPE1_0250  254651 ..  254674 +  -8.8  -5.60993   AGACATATTTACAAG          CCCAGCAAGG ATCT TCATGCTGGG           TTTTTTTATACGGGG  95 73
   CPE1_0251 NONE
   CPE1_0252  256092 ..  256102 +  -3.2   -4.2649   CTGCAGAGATGTTTG                 GTTC TTC GGAC                 TTTGTGGTTTTCTTG  57 42
   CPE1_0255  259940 ..  259950 +    -4  -3.62864   ATCTTATAGAGAGAC                 GAAA CTT TTTC                 TTTCCAGTACGTTTC  54 203
   CPE1_0257 NONE
   CPE1_0258  263187 ..  263220 +  -7.4  -3.00039   ATAATTTCCTGTGGC     GCCTGCGTAGCTCA AGGAGG TGAGCTACGTCAGC      ATTTACTTGTCCATG  66 37
   CPE1_0259  265125 ..  265139 +  -5.8  -4.98758   TAACAATGTAAAGTT               TTCTTT CAA AAAGAA               TTTTTATAGATTTTT  82 329
   CPE1_0261  266994 ..  267011 +  -2.1  -3.69216   ATTAAACCTCCAAGA             GAAAACAC GCA GT-TTTTC             TATTTTAAGTAGCAC  47 278
   CPE1_0265  271824 ..  271835 +  -2.2  -2.84325   AGGAGATCCAAGTGT                TCCT TTGG GGGA                 TCATGTTTAGGGAGC  41 46
   CPE1_0266  272598 ..  272610 +  -3.3  -2.60763   AACTAAAGAAGGAAA                GCCGT TTG AGGGC                ATTATGGAATATGAG  43 57
        phnP  273440 ..  273459 +  -4.3  -2.60714   TGCATGTAGTCGTGT            GATTCCT AAGGAG AGGGATC             CTTCTCAAGCTTTAG  47 60
   CPE1_0268 NONE
   CPE1_0269 NONE
   CPE1_0270 NONE
        glgB  279358 ..  279383 +  -2.7  -4.21343   TTTTCTGTTTTATAA         TGAAAACATAG ATGT TTATTTTTTCA          TTTCTATGTCTTCAA  55 108
   CPE1_0272  281245 ..  281260 +  -3.3  -3.95036   TAATTTTTTTAATTA              CAAAC TATCGC GTTTG               TTGTTTAAAATAATT  55 91
   CPE1_0273  282893 ..  282922 +  -4.9  -5.71712   TTGATTTAAACGATA       GGGCGTGTTTGGA GAGA TCCTGACAGGCTC        TTTTTTTGTGTGGCA  86 46
   CPE1_0274  285514 ..  285525 +  -2.2    -4.386   TTTTATAAAGGGTGT                TGCT GAAA AGCG                 TTTTGTCACAGCTTG  58 433
   CPE1_0280  300349 ..  300368 +  -2.9  -4.94058   GGCGGGCTTCTGGGT            TGTCTTT TTCTTC AAAGGCA             TTTTGTTTGGCTTCA  70 419
        gatC NONE
        gatA NONE
        gatB  326131 ..  326145 +  -3.5  -5.80727   TTTTTTATTTCTAGG               GGACT TCTTT GGTCC               TTTTTTCTTATTTTT  89 300
   CPE1_0296  330873 ..  330891 +  -4.4   -4.2828   AAAAGAGATCAAGTA             CCTGAGCC CAT GGCGAAGG             TTTTCGTGGATCAAA  63 273
   CPE1_0298  333125 ..  333169 +  -6.5  -6.77747   TAAATTTTTAGGTCA ACCCCTAAGTATCCTCTCT ACCCCCC AGAGGGGGTATTTAGGGCC TTTTTTTTTTTGTTA 100 46
   CPE1_0299  334246 ..  334260 +  -4.3  -4.09864   GGATTCAAGCTCTTA               GCATA GCAGA TATGC               TTTTCACAAATGAAT  62 96
   CPE1_0301  336506 ..  336520 +  -2.8  -4.70659   AAGAAATACCTTTCC               TCTTTG TAG CAGGGA               TTTTTCCCTGTGGAA  63 17
   CPE1_0302 NONE
        ksgA  338544 ..  338555 +    -3  -5.94597   TTTAAGCTGTTGTCG                TTCT CTTA AGAA                 TTTTTTTTCGTATTC  89 17
        tpiA  344273 ..  344290 +  -4.1  -3.33344   GTGATCAAAAACTTC             TGCAGTA CAGA TTCTGCA              TGTTGAATTTTTTAT  51 2
        secG  344942 ..  344953 +  -2.2  -3.64488   ATACAGAAGGATATA                CAGG ACTT TCTG                 TCTTTTCGGGAAATT  47 134
         def  345661 ..  345685 +  -4.3  -5.24449   AAAATAGCTTAGTAT          CCTAAAAACAC AGG GTTTTCTTAGG          TTTTTTACATTTATC  79 21
   CPE1_0319  358107 ..  358120 +  -3.8  -4.90296   TTGTGCCAGATTACC               GCAG TTGCTC CTGC                TTTTTCTAGAGTTTT  70 3
        rpsU  358459 ..  358477 +  -6.6  -3.14344   CTAAGTCTAAAGCTG             CGGCCAAG TAT CGTGGTCG             TTAATCAAAAAAATC  59 3
        dnaJ NONE
   CPE1_0322  362175 ..  362188 +  -3.1  -5.28942   TGCGCCGCTGGAGAT               GGAGA TTTT TCTTC                TTTTTGTTTCCACTC  79 435
   CPE1_0325 NONE
        ptsH NONE
        ptsI  367676 ..  367697 +  -5.3  -4.57073   ACGTATCTATTGCTG           CA-GATTCTA AAA TAGAATCGTG           TTTTTCAGAAGACTC  70 384
   CPE1_0334  373011 ..  373022 +  -4.4  -3.03243   TTTTATGTTTATGAA                GCTT TCAA AAGC                 TATTGCGAGGTAGGT  50 83
   CPE1_0335  374890 ..  374902 +  -3.4   -5.0133   GACTCAAAAAACAAA                GCAT AAACG ATGC                TTTTTTAAAGGCGTA  68 78
   CPE1_0336  375635 ..  375668 +  -3.5  -4.13945   AGTTGGGATAAGTAA     TTTTAATTGAAAAGTT AAT AACTTTT-ATTTAAAA     TTTTCCCATAAAAAT  57 39
        accD NONE
         dut NONE
   CPE1_0339 NONE
   CPE1_0340  378337 ..  378358 +  -3.7   -3.4178   TTGTTGTTATGTTGA           TCTCATAGG TTCC TCTAGGAGA            TTATAGTGGCATGAT  51 92
   CPE1_0341  379535 ..  379567 +  -2.1  -4.17611   TCTTAATTTTCTTCC      CTTATCTGTGTATAA TTG TTTTATATAGTTAAG      ATTTTTTTTGTCATG  54 124
   CPE1_0342  381116 ..  381144 + -16.3  -3.93166   CTTATTAAGAAAGTA        GAAAGAAATAGCT AAC AGCTATTTCTTTC        TTGATTTTTTGAACC 100 11
        mnmA  384179 ..  384195 + -10.1  -3.61398   TCTTCAACCAGTGTG              GCGCGGA GTT TTCGCGC              TTCTTGACGGCAAGA  80 94
        lplA NONE
   CPE1_0348  389091 ..  389102 +  -4.4  -5.61596   CCATAATAGGGGGAG                TCCT TGTT AGGA                 TTTTTTTATAAGCAT  85 160
   CPE1_0349 NONE
   CPE1_0350  391639 ..  391655 +  -2.3  -4.14874   AAACCATTAAAATCT              TTCTAAT TAA ATTAGGG              TTTTCAGAATATTCT  54 153
   CPE1_0351 NONE
   CPE1_0352  392380 ..  392402 +  -2.8  -4.53419   CTTTTTTCTGGACTT           TGCTTTTTTT AAT AAAGAAAGTG           TTTCTTCTTGTAGTA  61 89
   CPE1_0357  396968 ..  396980 +  -3.4  -3.48807   CTCCCTTTACGACTG                CTTC TCCTC GAAG                TTCTACCTTTCCTGC  49 110
        mraW  401005 ..  401017 +  -2.7  -3.60525   CTGCGAAGTTACGTT                GTTTT GAA AAAGC                TTCTGTATGAATAAA  48 3
   CPE1_0363 NONE
   CPE1_0364  403243 ..  403259 +  -3.7  -3.54459   CAAAGACGCCTTAGA              CAAAAAG AGA CGTTTTG              TTTACAAGACCTTCC  52 27
        murE NONE
   CPE1_0366  405870 ..  405886 +  -4.5  -3.90744   TGCATATGATGAGCT              TAGACTT CAA AAGTTTA              TTATTTAGGGCCAAG  59 318
   CPE1_0368  406283 ..  406304 + -13.1  -3.19398   TTGGGTCTTTACATA           GCCCCTAAA CATC TTTAGGGGC            TTGACTCTAATTTTT  91 67
   CPE1_0369  407595 ..  407618 +  -3.3  -4.82901   GATAATTGTTTTTAA          GAATTATTT GTACTA AAATAGTTC           TTTTTGTAAGAGGAG  65 68
        accA NONE
   CPE1_0371  410553 ..  410579 +  -4.4  -3.53012   AAAGGCGGTCTTGTT         TTCTAGGAACCG TAG CGTTTTCAAGAA         TTTCAGGAAGAGAGG  52 83
   CPE1_0377  415250 ..  415275 +  -6.1  -3.59262   ATTGCTGCAAGATAT         CCTTTCCTGGA AGTT TCCAGTAGGGG          TTTGGAGATCTCAGG  63 481
   CPE1_0379  417847 ..  417857 +  -5.4  -5.07652   CCTGTAGGAGGACGT                 GAGA ATT TCTC                 TTTTGTTTTGGAAGA  79 293
   CPE1_0380  419333 ..  419347 +    -5  -2.81519   GTTCTTTTTCAGGAG               GATGAG ATT CTTATC               TAACTTCTTTTTCTC  51 145
   CPE1_0381  421443 ..  421469 + -12.5  -3.05597   AAGCTGTCACGTATA         TTGTTTCTCCT GAAAA AGGAGAAACAA         ATTTTAAAGAGTGCG  93 106
   CPE1_0383 NONE
   CPE1_0384  424007 ..  424021 +  -5.7  -4.47707   ATGTAGAAAGATCGG               CGCAA GGATA TTGCG               TTCTTTTTCGTACAA  73 262
   CPE1_0387  426675 ..  426689 +  -2.8  -2.50991   CCGCATACAATAATC               GAACGT GGG ACTTTC               ATGATTTATTTGGAT  41 28
   CPE1_0388  428128 ..  428171 +  -9.8  -3.58522   ATAGGCTTTCCTAAA GAATTT-AAGACAATCGCTGC ACA GCAGCGGTTATCTCGAAATTC TTTAAGGATGCTGAT  80 348
        ruvB NONE
   CPE1_0394  433582 ..  433596 +  -4.2  -3.28712   AACTTGTTTAGGTCA               GCGTGT TCT ACAAGC               TTGTCCCAGAGAAAA  51 385
   CPE1_0396  435847 ..  435869 +  -7.8   -5.9218   TATGGTGGAGTCTAG           CTTGTATGCT TGA AGCATATGAG           TTTTTTTCTTATGTG 100 42
   CPE1_0397 NONE
   CPE1_0398  438005 ..  438015 +    -4  -4.93288   ATTGTTTTTTAATTT                 CTTA TTA TAAG                 TTTTATTTCCCTATT  70 40
   CPE1_0399  438740 ..  438763 + -12.6  -5.85737   TAGAAATGTCTTTAA          CGGTAAAGAA GAGT TTCTTTACCG           TTTTTTTATTCATAT 100 63
   CPE1_0400 NONE
      yabC_1  440723 ..  440745 +  -4.2  -3.61398   TCTTTGAGGCGCTCC           TTTTCTGGAA GAG TTTCTGAAAA           TTCTTCAGGAGGAAG  54 242
        sucA NONE
        sucB  445988 ..  446015 +  -3.4  -3.80142   AGAAAGCATAGAACA        TCCCGAG-GCTCT TTT AGAGCTCTAGGAA        TTTCACTATTCTCTG  52 1
   CPE1_0413 NONE
   CPE1_0414  454619 ..  454630 +    -3  -4.86731   GTGTGACTATTAAGA                TGAA TTCA TTCA                 TTTTGTTTACGGAAG  68 397
        tyrS NONE
         gnd  457831 ..  457852 +  -2.2  -4.07568   TAGGAAAGAACCAAG           CGGTGATG ATCCAA CATCTCTG            TTTTGAGACAAACCC  53 506
   CPE1_0418  460653 ..  460681 +  -6.9  -5.52347   AGTTACTTCTAATAT        TGAATAATTAGAC TGC GTCTAATTGTTTG        TTTTTTAATTTTGTT  93 19
   CPE1_0419  462139 ..  462166 +   -20  -4.96501   AGAACGTAAGAAAAA        GCCCTGCTTCAC ATTT GTGAAGCAGGGC         TTTCTTTTTATGAAG 100 59
   CPE1_0422 NONE
   CPE1_0423 NONE
   CPE1_0424  467979 ..  467996 +  -5.6  -3.30619   GGGAGAAGGAGTAGC             TATGGC TCTTTC GCCATA              TTATGGAGCATCATT  55 27
   CPE1_0425 NONE
         dxr NONE
   CPE1_0427  472069 ..  472080 +    -3  -6.07969   TCCTAAGCAGTGAAT                GATA TAGA TATC                 TTTTTTTTGATTTTG  95 84
        smpB  475954 ..  475967 +  -5.2  -4.08557   ATTCCCTGGATTTTA               GCCC AGGCTA GGGC                TTCTTCTTTAGAGGA  65 52
   CPE1_0435  478952 ..  478975 +  -7.5  -7.07835   TTTCTGGTTTTTTTA          CG-CAGAGAG TTTGT CTCTCTGTCG          TTTTTTTTTTTTTTA 100 258
   CPE1_0436 NONE
   CPE1_0437  481448 ..  481477 +  -5.1  -4.40572   CTGTTTGAGGATACC       TTTGAGAAGATTT CAGT AAATCTCCCCAAA        TTTTATCGAGCTTCT  68 91
        ychF  492651 ..  492662 +  -4.4  -3.60048   AGCAAATTTTTTTTC                TTCC CTAA GGAA                 CTTTTTTGGAAAGAA  54 112
        trxB  501375 ..  501403 +  -3.2  -4.24204   AGAAAGATTCTTAAG       CTAATGCAATAGC TGTT GCTGTAGCAT-AG        TTTTGGCTATGACTA  57 22
         lgt NONE
   CPE1_0457 NONE
      dnaA_1  507457 ..  507470 +  -4.5   -4.2717   CGTCCTGCCCAAGCT               CCACG TTCA TGTGG                TTTTACTGACATGGT  66 408
        glgP  510490 ..  510506 +  -2.9  -3.88498   AGAGACTGGCTTTTT              GCTTTCG CAA CTAAGGC              TTTGATCTCTGCAGA  52 335
   CPE1_0464  514819 ..  514831 +  -7.7  -2.82516   TTGATATGGACGCGC                TGGAG CAC CTCCA                TATACTCCTGGAGAA  61 170
        fabH NONE
        fabD NONE
        fabG NONE
        acpP  522693 ..  522725 +  -3.6  -4.43392   GCAATATCTTTCATT     GCAAAAGGGCCA-TAG ATA TTAGTGGCTCTTT-GC     TTCTTTTGCTTTTAA  62 56
   CPE1_0479  531383 ..  531395 +  -4.1  -4.19817   AGATTTTTTGTGAAT                GCTTT ATT AAGGC                TTTTACATGACTAGA  62 216
   CPE1_0480  533568 ..  533578 +    -4  -3.21912   TAGATGAGGGCTTTA                 GTTT CGG AAAC                 TTAATGGATTCGAAA  49 38
        mgtE  534995 ..  535005 +    -4  -2.95093   TTCTTTTTTAGCTAA                 TCTT ATA AAGA                 GTTTAATTAAAATCT  46 26
   CPE1_0482  536572 ..  536599 + -12.8  -3.76168   AGTACAGAGGATAAG        CAGCCATCTCCT TAAA AAGAGATGGCTG         TTGTTCAGTTATACT  95 11
   CPE1_0485 NONE
   CPE1_0486 NONE
   CPE1_0487 NONE
   CPE1_0488  543520 ..  543530 +    -4  -3.05816   TCAATCTTAAGAGGT                 CTAA TGT TTAG                 TTCGGTAACCCATCA  47 31
   CPE1_0489  543978 ..  543998 +  -3.3  -4.56775   CTTATAAAATCAGTT            CTAACTTTT ATT AGAAGTGAG            TTTTTGGAAAAAACT  62 61
   CPE1_0490  544769 ..  544804 +  -5.5  -3.72695   ATAAAGCTCTTCTTT    TGATGTGGCATAATG TCAAAT CTTTATGGCGCATCA     TTTCATGGAGAAACT  61 95
   CPE1_0491 NONE
        gyrB NONE
        gyrA NONE
         tmk NONE
      dnaX_1  551838 ..  551851 +  -4.5  -3.92522   AGAAAAAATTAGCGC               TCCTC CATA GGGGA                TTTGTGAGGTTAACA  61 291
   CPE1_0497  553387 ..  553397 +  -3.2  -2.78206   CTCTATGATAATAGA                 CTTC CAT GGAG                 ATCTTCTTTCTCATC  44 33
   CPE1_0498  554342 ..  554354 +  -6.3  -3.63073   CATAACTTCTAAAAT                GCTTT CAA AAAGC                TTCTTAGCAAATCTA  64 29
        ubiA NONE
   CPE1_0502  557804 ..  557814 +  -3.2  -4.18494   GCCTTCCATTGATCA                 CTTC ATG GAGG                 TTTTCAATAGCAATG  58 55
   CPE1_0508  561296 ..  561307 +    -3   -3.6053   TTTGTAATCGAACGG                TTGA GGGT TCAA                 TTCCTTTCTCCAGCA  50 135
   CPE1_0511 NONE
   CPE1_0512 NONE
   CPE1_0513  564088 ..  564113 +  -6.2  -5.60993   ATTCTTTGATTGCGG         TCTCCCAG GGTCTATCAA CTGGGAGA          TTTTTTTATCACGCG  88 32
        rpmG NONE
   CPE1_0516 NONE
   CPE1_0517  567952 ..  567963 +  -2.2  -5.01732   AGGGGAGTATTATTA                GAGG ACGC CTTC                 TTTTTTAAGAGAGTT  65 6
        rplM NONE
        rspI  568991 ..  569020 + -12.3  -5.43866   TTGTTCTATTGTTTT       GCAAAGCCTTTCT TTAA AGAAAGGCTTTTC        TTTTTTTGGGGATTC 100 51
   CPE1_0522  571291 ..  571315 + -10.7  -3.02511   CTCTTAAGTAGTATG          TTCCCTCGCTC TGA GAGCAGGGGAA          TGTTAAAAAACTGAC  83 68
   CPE1_0523  571936 ..  571959 +  -6.1  -3.48153   TAGCATAAAAAGAAA          GCCTCCTTTT TAACT AAAAGG-GGC          TTATAGCTTATTCCT  61 46
   CPE1_0524  573595 ..  573622 +    -5  -3.89611   ATAAAGGTGCTTTTT        CTGTTC-CTATAG ATT CTATAGGGAAAAG        TTCTGTTCTATTTTC  59 150
   CPE1_0530  579610 ..  579660 +  -7.9  -3.01712   CCTTATTTCGAAGAT TTGCTCTTTCAAGTTTAGT TTTTTCGCTACCT ACTAGACTTGAAAGAGCCA TCTTCACCAGGAAGC  66 50
   CPE1_0531  580827 ..  580841 +  -4.2  -2.62396   GCATTCAGAAGGTCA               GGAGTT CGA ATCTCC               TAGTCTCCAAACCTG  47 160
   CPE1_0534 NONE
   CPE1_0535  582698 ..  582711 +  -2.3  -3.35046   GAGATCCCTAAAAAT               GCCTG CTTA CATGC                TCTTTGCAAGGGTAA  45 363
   CPE1_0537 NONE
        dsbB  585298 ..  585312 +  -3.4  -3.74693   TCGAGAAAGGATTAA               GCCGTG GCG CGCAGC               TTTAGTAGGATAAGA  53 439
   CPE1_0540  587218 ..  587229 +  -4.4  -2.94099   TTAGAGGGGATTAAA                GCTA GGTG TAGC                 TGTGTCATAAGCAAA  47 378
   CPE1_0546 NONE
        guaA NONE
   CPE1_0548  595984 ..  595995 +  -2.2  -4.17009   TAAACACTGCATCGC                CAGC CACA GTTG                 TTCTTGTTATTGTTT  55 391
   CPE1_0552  613093 ..  613104 +  -2.2  -4.39696   TATAGAAATAAGGAT                GCTG CTTT TAGC                 TTTATTAATTTCAGA  57 493
   CPE1_0554  624875 ..  624887 +  -5.5  -3.14211   CAAAAACCACTTGTA                GTCCA GTT TGGGC                TTCCTAAGAAAAGCT  53 334
        incA  634590 ..  634611 + -10.9  -5.69793   TCTTTTTTTGCAATA           GGCGAGAGA GTTT TTTCTCGCC            TTTTTTATTTCCTCT 100 57
   CPE1_0565  635472 ..  635500 +  -9.1  -5.14563   CTTATGATTTCAGGC        GTTAAAACCAATT AAA AATTAGTTTTAAC        TTTTTTAGTAAAAAA 100 11
   CPE1_0566 NONE
   CPE1_0567  640297 ..  640320 +  -5.5  -4.18018   TCTATGTTAATTAAT          TTAATTTCA TTAATT TGAAATTAA           TTTTACATAGAGGAA  66 60
   CPE1_0568  642012 ..  642028 + -10.1  -5.50499   TAAGCACTATCCTTT              GCCTCCT GAG GGGAGGC              TTTTTTTACATGTAC 100 413
   CPE1_0572 NONE
   CPE1_0573 NONE
   CPE1_0574  647835 ..  647854 +  -6.5  -2.90075   TTGTAGAGGATTTAG            GAAAGAG CTAATA CTCTTTC             TCTAGTTAAAAAACC  58 15
   CPE1_0575  649266 ..  649283 +  -2.6  -2.78384   ACTTTTTTCGTTGAA             GCGAGG TAATCT CCTCGA              TATACTAGGAAAAGC  42 74
   CPE1_0576  651089 ..  651104 +  -2.6  -5.10767   CAAAATAACAATTCT              C-CTTCT TTA AGAAGCG              TTTTTGTATTGAATC  69 44
   CPE1_0578 NONE
   CPE1_0579 NONE
   CPE1_0580 NONE
   CPE1_0581 NONE
   CPE1_0582  657258 ..  657283 +  -4.1  -3.91716   CTAATATAGAAATCA         TGA-AATCCCCT GAA AAGGGATTCTCA         TTGTTTCAAAAATAG  59 32
   CPE1_0583 NONE
   CPE1_0584 NONE
   CPE1_0585  661908 ..  661920 +  -3.4  -2.94416   ATACTTTTCCCTTAT                GAAC TAGAT GTTC                TCTCTCCTCAACATG  44 400
   CPE1_0590 NONE
   CPE1_0591  668396 ..  668414 +  -3.8   -5.3689   CGTTGATAAAATCTC             GTTTCTCC GTT GAAGAAGC             TTTTGTTTTCTTTCT  80 68
   CPE1_0597  680959 ..  680977 +  -6.1  -2.56596   CAGTTAACCTTACGT             TTCTTAC TATCT GTAAGAA             TCCCTTCGTCAAAAA  53 523
   CPE1_0606 NONE
        pepF NONE
       groES NONE
       groEL  693697 ..  693731 + -12.4  -4.69549   TGCTTTTACTACAAA     GGTCTCTTTTCTTT CTCTTTT GAAGAAAAGAGACC     TTTTCGTTTTGAATT 100 60
   CPE1_0610  694682 ..  694708 +  -4.4  -2.60075   AGTAGCTCAGCGGTA         GAGCAGTGGACT GTT AATCCATTGGTC         GTTGGTTCGAACCCA  47 138
   CPE1_0612  696387 ..  696398 +  -2.2  -2.58069   TCCTAAATATCTGCC                G-CCG TGA CGGAC                ATATTCTGATATACG  40 521
   CPE1_0614 NONE
   CPE1_0615  700519 ..  700545 +  -6.6   -4.0371   ACATGCACTGCGCAA         GCTATATCTTTC ATA GCAAGATTTAGC         TTTGTCTACCAAGTC  69 437
   CPE1_0627  709870 ..  709881 +  -2.2  -5.01422   TAAAGATCTGGAACT                CTCT AAGT AGGG                 TTTATTTTTCTCTAA  65 16
   CPE1_0628  712310 ..  712320 +  -3.2  -3.52919   AATATAACCAGGTTG                 CGTT TGA AGCG                 TTATGGTTACATCCT  49 384
   CPE1_0630  716287 ..  716298 +  -4.4  -4.62069   CAGCAGCAGCTAGCT                CTGA GCGC TCAG                 TTTTTGACATAAACA  68 70
   CPE1_0632  718681 ..  718707 +  -3.1  -4.29139   TGTTTAGGAGTACAA        GCATGAGAAAAC TCTC GATTTCT-ATGC         TTCTTTTAGCTTTGG  60 176
   CPE1_0633  720386 ..  720397 +  -5.8   -4.4078   GGATACGGAGGCACA                GCTC TCCA GAGC                 TTTTCATTACAGCGA  70 502
   CPE1_0636  723283 ..  723310 +  -2.1  -3.05022   CTATTTTCTAGGATT        TGGAAAAAGTA ATGGCG TATTTTTCCCA         TCTATGTATACAAAA  42 14
   CPE1_0637  724663 ..  724677 +  -2.2  -2.99319   TTTTTATGGCCAAAT               TAAAAG AGG TTTTTA               TGTGTCTAACGAATT  42 141
   CPE1_0638  725047 ..  725057 +  -5.4   -3.4582   AGTTAATAGATTCAT                 CATG TGG CATG                 TATTTCGTAAAGTAA  57 102
   CPE1_0639  726517 ..  726528 +  -4.4  -3.50572   CTTATCATAGTTCGA                CAAG ATCC CTTG                 TTCTATACCATAAAT  52 133
        uvrA  733751 ..  733765 +  -8.6  -3.06302   AAACAAACACCTCGT               GACAAG GAT CTTGTC               TTAACTCAGGATCAT  65 306
   CPE1_0652  748137 ..  748147 +  -3.2  -2.82623   GAAAAGAACTTTCTT                 TGTG CAG CACG                 TGATTCTGCAAAGCA  44 45
   CPE1_0667 NONE
   CPE1_0668  764515 ..  764533 +  -3.2  -4.42653   GTAACAAAAAGGCGC             TCTAAAAT ACT ATTTTCGA             TTTTCTGGATAGCGT  63 285
   CPE1_0686  782131 ..  782146 +  -4.8  -2.99576   CTAAGTAAGGAAAAA              CAATTT TAAA AAATTG               CTTCTTATTGACTTT  52 71
        bioB NONE
        bioF NONE
        bioD NONE
        bioA NONE
   CPE1_0691  786802 ..  786816 +  -2.9  -4.19678   CAGCTCGTGAAAAAC               TTAGA AAAAC TCTAA               TTTCTTAGACTATAA  55 11
        aroA NONE
        aroK NONE
        aroC NONE
        aroB NONE
       aroDE NONE
   CPE1_0697 NONE
   CPE1_0698 NONE
   CPE1_0699 NONE
   CPE1_0700  796660 ..  796687 + -14.4  -5.42975   CACCTCTAAATAAAA        CAAGTAAGAGAT CTTT ATCTCTTACTTG         TTTTTCTTTATATGA 100 32
   CPE1_0701  798335 ..  798347 +  -3.4  -3.02144   CGACTGCAAGCATTG                CCAT GAAAA ATGG                TGTTGAAACCAATAG  44 494
        xerD  803383 ..  803396 +  -3.9  -5.16132   AATCCCCAAAAAAAA               TCTAA AACC TTAGA                TTTTATTTTACTATG  73 336
   CPE1_0708 NONE
   CPE1_0709  805684 ..  805695 +  -4.4  -2.62545   CAGAAATCACTCTAA                TCGT TAAA ACGA                 GATTTTTAGCATGTC  47 19
   CPE1_0710 NONE
   CPE1_0711  809178 ..  809193 +  -7.6  -2.72461   TCCTAAATCATACAC              TACCTC AGTA GAGGTA               ATTTCAAAAGCCTTG  60 441
   CPE1_0716  815986 ..  815996 +  -5.4  -3.21934   CCTGGCATAATAGAA                 GAAC CGG GTTC                 ATTTTGTGGAAAAAA  53 461
   CPE1_0718  818872 ..  818883 +  -2.2  -3.04715   AATTTCTTTTTGATA                TGTC TGTA GACG                 CTTTTGCAAAAGCTC  42 139
   CPE1_0720 NONE
   CPE1_0721 NONE
         map  821964 ..  821985 +  -4.5  -5.30616   GCTCCTGACAGCGTT           CAGCA-TACA GTT TGTGCTGCTG           TTTTTCTTTAGCTAG  82 410
   CPE1_0725  823665 ..  823681 +  -2.3  -2.68823   CAACAAACCTTTAGG              TTAAATC TAG GATTTTA              GTTATGTGGACGACA  40 22
   CPE1_0726 NONE
   CPE1_0727  824758 ..  824770 +  -2.7  -2.62098   TAAAAACAATTCATA                TTCTA GTA TAGAG                GTCTTCGTTTACTTC  41 58
   CPE1_0728  825647 ..  825668 +  -5.1  -2.78395   CATCATCAGAAGTGA           GATGAGGGA CCAA TTCCTCACC            TAGTTCCTGAACCTT  50 159
        rpsO NONE
        pnpA  828848 ..  828865 +  -8.5  -6.41881   TTAAAATAAAAAAAA             GAGCTAA ATAT TTAGCTC              TTTTTTTTTCTTATG 100 55
   CPE1_0735 NONE
   CPE1_0736  835245 ..  835257 +  -6.3  -3.13403   AATCTTCGTCATCAA                TAGCT TTA AGCTA                TGTTCATCCCAAGAG  57 210
        nusB NONE
        murB  841724 ..  841745 +  -5.1  -3.81089   AGGAATGCATGAATA           GCTTTTGGG CGCT CTCTAAAGC            TTCTTGCTGTATATC  61 365
   CPE1_0750 NONE
        rmuC  849516 ..  849539 + -11.8  -2.82516   AAGCCTTCAGGTAGA          GATGCTGCAG CATT CTGTAGCATC           TCTACTCCTGCAAAA  83 66
   CPE1_0753  853899 ..  853932 +   -17  -4.45068   CTTCTAGATCATCTA     GCTTAAGACTTGTC CTTTTA GACAAGTCTTAAGC      TTTATTCTTCAGGCT 100 20
        ftsY  858854 ..  858873 +  -5.8  -3.44801   CTGCTACTGTCAAAA            TTTTACTC ATCT GAGTAAGA             TCATTTTTTGTCAAA  59 325
   CPE1_0762  865305 ..  865321 +  -5.1   -2.8547   AAAAGGAATCTTCCT              CTTAACC AAT GGGTAAG              TATGCTGTCCCAAAT  51 21
        lpxB  867164 ..  867179 +  -3.4  -3.82097   TCTTTCCCTTTAAAG              TTAAAA TTTT TTTTAA               TTTCATCCCTTTAAA  52 28
   CPE1_0765  869949 ..  869971 +  -8.5  -3.27298   CCATATGCAAAGAAA          GAGGGAGACT AAAA AG-CTCCCTC           TTAATGCTTAGAAAA  73 14
   CPE1_0769 NONE
   CPE1_0770 NONE
         ide  881751 ..  881783 +  -4.9  -2.74012   CAATGATGTTAGGCA     TGTTTGCAAGGAGG GTAAGG CCTCCA-GCAGACA      TGCTTCCGATAATGA  49 182
   CPE1_0773  883814 ..  883833 +  -2.8  -4.60041   ATCACTACCTATCTC            CGCTGCAA GATC TTGCAATG             TTTTTAAAGGTAGCT  64 482
        glgA  888754 ..  888766 +  -5.5  -2.72049   CGAAACGCACATACT                GTGCG TAA CGTAC                TAATTACAGAGTCTC  49 287
   CPE1_0783  892732 ..  892742 +  -5.4  -4.30995   TTTTCATAACTTCAC                 TGAG TGA CTCA                 TTATTTTCTGGAAGC  68 357
        mutS  898212 ..  898223 +  -2.2  -3.41125   CAAGAAAAAGACCAG                CAGC TTAT GTTG                 TTCTAAATATATGCG  45 8
        uvrC  900283 ..  900293 +  -5.4  -4.67556   CTTCTACGCGAACTT                 TCAC TAA GTGA                 TTTTTAGAGTCTTGT  73 281
   CPE1_0790  901081 ..  901115 +  -7.3  -4.56597   GAAGAACTAAAAGAA     GCGTTGAAAATTCTT ATGTA AAGAAATTTCAACAC     TTTTTAGCAAAGAAA  80 5
        rnpA  902726 ..  902750 +  -9.3  -4.82901   CTTCGGTATCCATTT          TTCCGCTTTCT ACA AGTAGGCGGAA          TTTTTCTGAGAGGAA 100 332
        cysS  905613 ..  905635 +  -6.2    -3.737   TCATCAAATAATAAG           GCCACCAGAG CTC CTCTGCTTGC           TTTAATAAAAGATTC  63 428
   CPE1_0798 NONE
        priA  910716 ..  910730 +  -4.2  -2.78384   TGCACAATACCCAAC               TGCTGC CGA GCAACA               TCTCCTAAGAGAGAG  48 264
   CPE1_0803  915114 ..  915124 +  -5.4  -4.09511   ACATCGGGAATACAA                 CTCT CTA AGAG                 TTTTAGGAAGCTGTT  65 110
         ppa  916871 ..  916884 +  -6.7  -3.85698   TAACCACCTCATAAA               GGAGA GTAT TCTCC                TTTATGAAGAAAAAA  66 27
   CPE1_0811  922748 ..  922767 +  -2.8  -4.19472   TGAAGCATCTTGTCA            CAGCGAAT ATAT AATTGCTG             TTTTAACATCTCTTG  57 323
   CPE1_0814 NONE
   CPE1_0815 NONE
   CPE1_0816  925527 ..  925552 + -11.3  -5.82316   CTTTAGAGTTAAAAA         GCTAAAAGAGG TTTT TCTCTTTTAGC          TTTTTTTTGCGTAAT 100 52
     groEL_2  936258 ..  936272 +  -2.8  -2.53392   CTGCCATTACTGTGT               TCTCTT CAA AAGTGA               TCACTTAGGGGGTTT  41 3
   CPE1_0826  937480 ..  937493 +  -3.9  -5.76633   CAAGCATAATTCCGC               TGAAA GTTC TTTCA                TTTTTTTCTCTGTCA  91 215
   CPE1_0829  939184 ..  939198 +  -5.7  -2.71144   TTGTAAGATCAATTC               TGTGG TAAAC CCACA               TGCTTCAGCAGCATC  52 52
        alaS NONE
         mfd NONE
        hemE  948196 ..  948210 +  -2.8  -3.17526   CCAACACGTTATCGC               CTATGT TCA ACATCG               ATTTTAAATTCCTAG  45 4
      hemN_1 NONE
        hemG  951133 ..  951144 +  -4.4  -4.58424   GGAAAAATACGCATC                TGCA AGAC TGCA                 TTTTATATCGTAATA  68 319
   CPE1_0837  954112 ..  954122 +  -3.2  -3.35001   ACAGATCTTTCTGTA                 CTCA GCA TGGG                 ATTTTGTATACTATG  48 125
   CPE1_0838 NONE
        yajC  955796 ..  955807 +  -5.8  -2.98457   TCATTCTCTATAATC                CCAG AAAC CTGG                 ATTGCTTTTTTATAA  57 42
        nqrF  957172 ..  957197 + -12.1  -5.93809   TAGATGATTTCGGAA         GCTAGAAAATA AGGC TATTTTCTAGC          TTTTTTTTATAGACA 100 21
        ftsK NONE
   CPE1_0846  966166 ..  966179 +  -2.4  -2.62184   CGGTATATTTTTCTC               CACT GGTAGA AGTG                TAATGTCGCAGAAGA  40 9
   CPE1_0847  966994 ..  967004 +  -8.2  -3.26834   TGTTGCCTATCAGGA                 GGGC AAG GCCC                 TTGATACTCTGCTTT  69 181
   CPE1_0851  971209 ..  971229 +  -6.1  -2.82623   CTGCACGTTCCCAAG            CTGTTGCAG GGT CTGGAGCAG            TAATTATAGAAAAGG  55 149
        serS  975373 ..  975384 +  -4.4  -2.99649   GATTAGGATCAACGT                TGCA AATA TGCA                 TCTATCTGGGCATAT  50 40
   CPE1_0856  976162 ..  976172 +    -4  -4.82901   TCAGCATTATCTGTT                 CTTT TAT AAAG                 TTTTTATAGACAGGA  67 6
        cadA  978349 ..  978361 +  -7.7  -3.54741   GATACACCGTAATGC                CTCCT GCA AGGAG                TTTCCCGAAGTCATC  68 206
        birA  980053 ..  980069 +  -2.2  -4.08394   AATTCTCTATCCATA              GCAACG CTTGC CGTTGA              TTTTCACAAGAATCT  55 160
        pgmA NONE
   CPE1_0863 NONE
   CPE1_0864  983983 ..  983993 +  -2.4  -3.35224   TTGTTTACTTTTTAT                 CAGG CCG CCAG                 TGTTTCCCCAAATCT  45 101
   CPE1_0865 NONE
   CPE1_0866 NONE
   CPE1_0867 NONE
   CPE1_0868 NONE
   CPE1_0869 NONE
        gpsA NONE
   CPE1_0871  991239 ..  991255 +    -3  -3.21551   TTTGTTTTGATCTTC              GCTAAA AGAGC TTTGGC              TTGCTCCGTACTTTT  46 491
         tig 1002444 .. 1002469 +  -5.5  -3.98075   ATTTTAATGTCCAGA         CTTATTAGGTC GGCA GGCATAATAAG          TTCTTTGAGTACTAT  63 93
        clpP NONE
        clpX 1004426 .. 1004444 +  -4.6  -4.14392   ATAAGAAGAGCTCCT             GAAGCTAT AGC ATAACTTC             TTTTAGAGATTGGGA  62 11
        pcnB NONE
        engA 1007261 .. 1007283 +  -4.3  -3.62775   CCAAAAAGAACAAAT           TAATTTGTT AAAAA AACGAATTA           TTATTAAACGATAAT  55 23
   CPE1_0883 1007890 .. 1007914 + -10.2  -3.46813   TGAAGATATAGACAA          GAAAAGAGAT AGGGG ATCTCTTTTC          TATTCTTCCTCATTA  85 41
        trmE NONE
   CPE1_0888 1015435 .. 1015449 +    -5  -3.86351   AGTGAAATTTGTTTG               CTTTCT AAG AGAGAG               ATTTTTTTAAACTGT  59 90
        brnQ NONE
   CPE1_0890 1020819 .. 1020835 +  -4.3  -3.68341   GTTTCTTTAGCTAAT              GGCATGG GGA CTAAGCC              TTCTTCAGTACAATT  54 490
        lpdA NONE
        lipA 1023528 .. 1023546 +  -2.4  -3.56226   TAAAAAGGTATGCGT             GGATTATG TTT CGTAGTTC             TATTTCTCGGTGCTT  47 192
   CPE1_0894 NONE
   CPE1_0895 1025450 .. 1025480 +  -8.3  -3.06183   CAATAACAAAGGAGC       GGCGTTTCTCTAA AATTC TTGGAGATGCGCC       TTGAGTAGAGATGAA  68 117
   CPE1_0896 NONE
   CPE1_0897 NONE
   CPE1_0898 NONE
   CPE1_0899 1028297 .. 1028314 + -12.7  -4.68994   TTCGGAGAAAAAAAA             CTCCCCC TTTA GGGGGAG              TTTTTACCTGCTGAT 100 44
   CPE1_0911 NONE
   CPE1_0912 NONE
   CPE1_0913 NONE
   CPE1_0914 1044588 .. 1044605 +  -8.4  -3.75332   AAAGCCTCTTAAAAA             GCGGCT ATGTAC AGCCGC              TTTACATTAAGAAAT  75 39
        thrS NONE
   CPE1_0917 NONE
   CPE1_0918 NONE
   CPE1_0919 1049721 .. 1049736 +  -3.2  -3.09635   AAAAATCACTTTGAG              GAGCTT TCAA AAGCCC               TTCAATAATCAGAAT  45 2
        trpS NONE
        uvrB 1052818 .. 1052845 +  -2.8  -3.95725   GGAGGGATTCCCCCA        GGAAG-TTATTGG CTT TCTATAAGCTTCC        TTGTTCTTAAGGATT  53 86
         eno 1054219 .. 1054230 +    -3  -3.07654   AAAAGAGTCTGTGCT                TCTT AAAG AAGA                 TGGTTTAGTTGTTAT  45 86
   CPE1_0923 NONE
   CPE1_0924 1058001 .. 1058012 +  -4.4  -3.73386   CCAAATCACTGAGCG                CTCT TTAT AGAG                 TTTAGCTCGTTCTCT  57 16
   CPE1_0926 1061316 .. 1061344 +  -8.1  -6.20267   TACCGCAGCCAAATG        CCAAAGGGGTTTT TCT AAGTCCCCTTAGG        TTTTTTTCTTTTTCC 100 8
   CPE1_0932 NONE
   CPE1_0933 NONE
   CPE1_0934 1070009 .. 1070029 +  -4.7  -3.25472   TTTCATTAAAGGGAG            GTTTTCGTA TGC TGCGAAGGC            TATGTTTGGGAGTAT  54 48
        tolB NONE
   CPE1_0936 NONE
   CPE1_0937 NONE
   CPE1_0938 1073239 .. 1073256 +  -2.6  -4.67943   GGATAGGTAATTCCT             GCGACC CCTCCT GCTCGC              TTTTCTGTATTCAAC  64 329
   CPE1_0943 1077507 .. 1077517 +  -6.8  -2.91681   TTGAAATTGCTGAAT                 TGCC AAA GGCA                 TCTCTAAACTTACCA  58 155
   CPE1_0946 NONE
        rpoN 1081700 .. 1081714 +  -4.2  -3.38007   TCTAAGACCGGAATG               GGTTGC GTA GCAAAC               ATTTTGATTTCTCTA  51 123
        topA 1085785 .. 1085795 +    -4  -3.40175   AAGCCCATCGCACCC                 TGTT GCG AACA                 TCTCTTTTGCCGCCT  51 343
   CPE1_0952 NONE
   CPE1_0953 NONE
   CPE1_0954 NONE
   CPE1_0955 1090848 .. 1090865 +  -5.6   -2.9296   ACATAATAAACACCT             CTCTGT CCGTAA ACAGAG              TCTCCTTAAGCTTTC  52 249
        recA 1092006 .. 1092030 + -10.9   -4.4767   TCATAAAAGCAAAAA          GGTTTTTCTTA CGA TGAGAAAAACC          TTTTATCCTAGCTCA 100 42
        rpsT NONE
   CPE1_0960 1096571 .. 1096593 +  -9.9  -5.77632   AATGCTTTATCTAAA           CCCTGAAAG CTATA CTTTCGGGG           TTTTTTTATGATTTT 100 56
   CPE1_0963 NONE
        glmU NONE
        ispA 1102373 .. 1102387 +  -4.3   -3.5511   ACTTTATGCGCGTAC               GCTTT AATTA AAAGC               TCTTTCTGGGTGAGA  55 15
   CPE1_0968 1102726 .. 1102748 -  -2.1  -3.44284   TTGTTATCAATAAGA           CTTTTCA TTTTCCACC TGAAAAG           AAATAAAAATAACAG  45 82
   CPE1_0967 1102321 .. 1102333 -  -6.3  -2.60615   ACTCTCTCCAAATAC                GATCT TAA AGATC                ACTCAGAACTTGAAG  54 171
   CPE1_0962 NONE
        recD 1096220 .. 1096233 -  -2.3  -2.66962   CTAGGAGGAAAAATC               GGTGC TGGG GCAGC                CATTTTATCTTCTGG  40 329
   CPE1_0958 1093783 .. 1093793 -    -4   -2.6927   ATGCGTGACATACTA                 TTTG TGA CAAA                 AATATAAAAGAGGTC  45 127
        sigA 1092006 .. 1092030 -  -8.7   -5.1417   TCATAAAAGCAAAAA          GGTTTTTCTTA CGA TGAGAAAAACC          TTTTATCCTAGCTCA  95 52
   CPE1_0951 NONE
   CPE1_0950 1085144 .. 1085156 -  -4.1  -3.90707   CCCTATGAAAAAAAG                CCTTC TAA GAAAG                GGGCAAAGAAATCCA  57 333
   CPE1_0948 1081230 .. 1081240 -  -6.8  -3.13403   TTTGCCTTACCAAGA                 GGAG TTT CTCC                 TAGGAAGAGTCTCTT  59 400
         ung NONE
   CPE1_0944 1076906 .. 1076954 -  -6.1  -5.74122   GACCACAGAAAAAAA TGCCCTAGCA-AAAGCTG-TGCA TGCCG CGCAACAGCTCAATGCTTGGGCA ATTGCCGATGATACT 100 431
   CPE1_0942 NONE
     groEL_1 1073623 .. 1073642 -  -8.6  -4.13767   GTGCTCATCCCAAAA            GCTCTTAC CAAA GCAAGAGC             TTTTAATCTTTATAA  85 52
   CPE1_0939 1072866 .. 1072882 -  -5.1  -4.13945   ATCCCTATGCCAAAA              GCACAAG AGC CTTCTGC              TCTTTTCTGATCAAG  65 75
   CPE1_0931 1065846 .. 1065877 - -16.8  -3.15427   AATATCTTCTACCAA      GGAGAGACAAAAAC TATT GTTTTCGTCTCTCC       TTGCAAACTTCTGGA 100 41
   CPE1_0930 NONE
        sdhC NONE
        sdhA NONE
        sdhB 1061321 .. 1061339 -    -3  -3.72363   CAGCCAAATGCCAAA             GGGGTTTT TCT AAGTCCCC             TTAGGTTTTTTTCTT  52 26
   CPE1_0925 1057653 .. 1057671 -  -3.8  -3.66256   GACATTCTTAAAATA             CTCCTCAG AAA CTCAAGAG             CTCTCCTTCCTCTCT  53 345
   CPE1_0915 1044588 .. 1044605 -  -9.1  -4.58685   AAAGCCTCTTAAAAA             GCGGCTA TGTA CAGCCGC              TTTACATTAAGAAAT  93 32
        mutL NONE
   CPE1_0909 1037623 .. 1037655 -  -3.6  -4.11092   TAACAATTAAAAAGA     TCCAGAG-TATTTTA TAAA CAAATTAACTCTGGA      GATACAGGCCTCTCC  59 4
   CPE1_0908 NONE
        gspD NONE
        gspE NONE
        gspF 1031301 .. 1031313 -  -4.9  -2.63382   TCCTACATTCATAAT                TACAA CGC TTGTA                TATTACTTGTGAGAG  50 12
   CPE1_0904 NONE
   CPE1_0903 NONE
   CPE1_0902 1029897 .. 1029912 -  -2.6  -5.02715   ATAGTAAAGTAAAAA              TATACG GCTG CATATA               GCTATTTCCCTAAAG  69 27
   CPE1_0901 1028836 .. 1028849 -  -2.5  -4.09685   GCCCACCTCGTAAAA               TAAAA TGCT TTTTA                ATAGTTCATCTAAAA  55 81
   CPE1_0900 1028297 .. 1028314 - -12.7  -5.93809   TTCGGAGAAAAAAAA             CTCCCCC TTTA GGGGGAG              TTTTTACCTGCTGAT 100 64
   CPE1_0891 1020153 .. 1020183 -    -4  -4.83169   ATTCGGGCAGAAAAA       TACCGTGTTTATTT ATA AATTAATCACGGAA       AACACTCTGGAAGAG  71 198
        psdD 1012350 .. 1012366 -  -3.1  -4.14318   AATACCAAAAAAAAT              CTTTAAA GTC TTTAAAA              TTCTTCTCTTTGAGA  57 20
   CPE1_0885 1010974 .. 1010984 -  -3.2  -3.41795   AAAGCCGTAGGATAA                 CTAC TAC GCAG                 CAAGTAGAGTCGTGA  48 18
        secA 1007890 .. 1007914 - -10.2  -3.69083   TGAAGATATAGACAA          GAAAAGAGAT AGGGG ATCTCTTTTC          TATTCTTCCTCATTA  86 25
   CPE1_0876 NONE
        mreB NONE
        pckA  994271 ..  994325 -  -2.5  -3.65554   TTATCTAACAAAAAC CATCATTTTTTAATTTTAAATGA AAAAACCCA TCAAAAAAAACTAAAAAATGATG ACCTTGAACTAAGTG  48 65
   CPE1_0873 NONE
   CPE1_0872  990418 ..  990430 -  -4.9  -2.90075   CCCCTGTGAACTATA                TTGTA GTG TACAA                CAAGACAAATCCTGA  49 365
   CPE1_0861 NONE
   CPE1_0860  979663 ..  979676 -  -2.3  -5.18726   CGTTCACAATAAAAA               GCTCT GTGG AGTGC                TCTGTGAAACCCTCC  71 235
   CPE1_0858  977692 ..  977729 -  -4.9  -3.34468   TCGGAACTAAAGAGA   TTAGGCTATCCCGTAAG CATA CTTACAGGAGATCATAA    AGTCAGCGCAGAAAA  53 466
        ribD NONE
   ribA/ribB NONE
        ribH  970946 ..  970958 -  -6.3  -5.09221   GAGAACAAAAAGAAA                TGCTT CAT AAGCA                ACTTATTTCTCCTGA  87 181
   CPE1_0850  968734 ..  968745 -  -4.4  -3.42352   AAATTGAAAAAAGGA                GTTG AGTA CAAC                 AGTAGGAATGCTGAC  53 90
   CPE1_0849 NONE
   CPE1_0848  966470 ..  966502 -  -8.5  -2.89921   ATCAACGCCTACATA      GGGTATGGAGTCTTT GCT AAAGAACCTATACCC      TCCTGGACCTACCTA  64 363
   CPE1_0836  950841 ..  950851 -  -2.4  -3.53224   TATCCTCTCTTTAAA                 GGTG AGG CCCC                 GAAGATAGTGCCTCT  47 10
         tkt  939082 ..  939107 -  -4.7  -3.06798   TAAACACCATAGAGA         CCTCCCCCA TATGGAGC TAGGAGAGG          CAGATGACACCATGG  50 69
         efp NONE
   CPE1_0827  936966 ..  936976 -    -4   -3.1355   CCTACTCACATCTAA                 GAAA AAA TTTC                 ATACTCTTCTAAACA  49 334
        murF NONE
        mraY NONE
        murD NONE
   CPE1_0820 NONE
        ftsW NONE
        murG NONE
        murC  925527 ..  925552 - -10.6  -4.70659   CTTTAGAGTTAAAAA         GCTAAAAGAG GTTTTT CTCTTTTAGC          TTTTTTTTGCGTAAT 100 21
   CPE1_0813 NONE
        miaA  922407 ..  922417 -    -4  -3.86346   TTATTCCTGTAGAAA                 GAAA TTC TTTC                 TTTCAGCGCATCGAG  57 49
   CPE1_0810  919656 ..  919672 -  -2.3  -3.06037   AGTCGAAAGCATAGA              TACAACA TCG TGTCATA              ACATCTGCTGGATTT  42 21
   CPE1_0809 NONE
   CPE1_0808 NONE
        fabF NONE
   CPE1_0806  916862 ..  916893 - -15.4  -2.72227   AATATTCTGTAACCA      CCTCATAAAGGAGA GTAT TCTCCTTTATGAAG       AAAAAAGATAGTTAT 100 18
   CPE1_0804  914673 ..  914696 -  -3.2  -3.83844   GCTAGCAACCAACAA          CACTACACAAC CCG GTTGT-TAGGG          CTAAGTCTCCCAGGA  53 353
   CPE1_0802 NONE
   CPE1_0801 NONE
       bioF1  910393 ..  910404 -  -4.4  -5.27335   TCCCGTAAATAAAAA                GCTT CAGG AAGC                 GTTAATTTTAGCCAA  81 33
   CPE1_0797  906842 ..  906857 -  -7.6   -6.5058   AGAAACAAAAAAAAA              GAGGAA TAAA TTCCTC               TTTAAAAAAATATGA 100 69
        lysS  905107 ..  905123 -  -5.9   -4.0257   GCGAAAAAGCAAGAA              CTTCCAA ATC TTGGAAA              GAGGCAGATTTCCTG  66 109
   CPE1_0794  902352 ..  902364 -  -3.3  -4.39571   TTGATAAAGGCAAAA                GAAGC AAA GCTAC                GATTGGTGACGAATA  61 22
        rpmJ NONE
        rpsN  901081 ..  901115 -  -9.5  -4.38092   GAAGAACTAAAAGAA     GCGTTGAAAATTCTT ATGTA AAGAAATTTCAACAC     TTTTTAGCAAAGAAA  93 59
   CPE1_0789  899876 ..  899890 -  -2.1   -5.4833   TTACTCAAGAAAAAA               TTCCC GGAAT AGGAA               AGGTAAAATACGAAA  78 173
        dnaG  893647 ..  893657 -  -2.6   -4.0911   GAAAATTAATAAGAA                 TTTT AAT AAAA                 GTTAAGTTATTGCAA  55 32
   CPE1_0785  893241 ..  893276 -   -12  -2.96711   TTGATAATCTAGAGA    CCTAAGAGACGATTGT TCTT ACAGCCGTCTCTTAAG     AAGATCTGAGAGACG  85 45
   CPE1_0784  892546 ..  892576 -  -9.9   -3.6279   AAACTGTGCTAAGAA      CCCTTTAGGTTTCC TTAA GGAAACCT-AAGAG       ATAGAGAAGAAATTA  82 41
   CPE1_0782  888004 ..  888029 -  -6.3  -4.00756   GAGTTTATGAAAGAA         GCCATTCTCCAT GCT ATGGAAAAT-GC         GTATGCTCTCATTAT  67 467
        rplY NONE
         pth  885449 ..  885463 -  -2.2   -3.1582   TCAGTCCACTAAAAT               TATTCT CTA AAAATA               CTTATGCTGACTCAG  44 27
        rpsF  885044 ..  885055 -    -3  -2.76696   TTTCTCCTTAACAAG                TTAC TCAG GTAA                 AGAAGCGAATTCTAA  43 14
        rpsR  884782 ..  884796 -  -2.1  -2.55351   TTTCCCTACATTAAT               CTTCC CCGAC GAAAG               GCAATAGTCCTAAAA  39 6
        rplI NONE
        ispE  883135 ..  883145 -    -4  -4.10161   GACGAGGGTTGAAAA                 TATG TCA CATA                 GAATCATGCTTCCTA  61 247
   CPE1_0772  881374 ..  881392 -  -5.2  -2.63479   AAGAGGCCTATATTA             GCAGGCTC CGA GAACCTGA             GTACTCTTTAGAAAC  49 220
   CPE1_0768  875291 ..  875303 -  -3.4  -2.87132   TTTTTTCTCTATAGA                GAGA ACCGA TCTC                CCATCATAAAACCCG  44 194
        plsX NONE
   CPE1_0766  869949 ..  869971 -  -8.5  -4.48299   CCATATGCAAAGAAA          GAGGGAGACT AAAA AG-CTCCCTC           TTAATGCTTAGAAAA  89 33
        glmM NONE
        glmS NONE
        tyrP NONE
   CPE1_0758  858402 ..  858415 -  -2.3  -4.40572   ATAATTCTTACAAAA               GCAGA TGGT TCAGC                AAAAGGAGGAACACT  58 168
        sucC  856450 ..  856464 -  -2.8   -3.8579   ACTTAACAACTGAAA               CATAAG CCT CCTACG               TACGACTCAAAGTGA  51 21
        sucD  855442 ..  855453 -  -2.2  -4.07246   CTATTCTAAACCAAA                GCTC CTCA GAAC                 TCCTTAACTTGAGAA  52 149
   CPE1_0754  853895 ..  853936 - -12.5  -2.63631   CCAACTTCTAGATCA TCTAGCTTAAGACTTGTCC TTTT AGACAAGTCTTAAGCTTTA  TTCTTCAGGCTTTAA  86 23
   CPE1_0752  849440 ..  849455 -  -5.4  -3.61398   CCTTCCTGTGAAGAA              GAAGAG CCCT CTCTCC               TCCCTACTCAGGACT  59 49
        nrdA NONE
        nrdB  842751 ..  842788 - -12.3  -6.20267   TTAAAAATAAAAAAA   TAAGAGGAAAGTATAAA AGCT TTCATACTTTCCTCTAA    GAACTTTCTTTTTTC 100 87
        trmB NONE
   CPE1_0745  841052 ..  841067 -    -4  -3.86346   TTAGCCCCTCATAAA              GTAAAG ACAG CCTTAC               AACACCGCATTGCCA  57 308
        infC NONE
        rpmI NONE
        rplT NONE
        pheS  837326 ..  837342 -  -4.3  -3.84389   AAGAAAACGGAAGAA              GAGGGAT TCG AACCCCC              GGACCCTTTCAGGTC  57 86
   CPE1_0737 NONE
   CPE1_0734  831736 ..  831747 -  -2.2  -4.94811   TCAAAAACAAATAAA                GTGA AGCG CCAC                 TAAGACAAGGACCTA  65 90
        ftsH  828848 ..  828865 -  -8.5  -6.34616   TTAAAATAAAAAAAA             GAGCTAA ATAT TTAGCTC              TTTTTTTTTCTTATG 100 36
   CPE1_0730 NONE
   CPE1_0729  825148 ..  825175 -  -3.4   -4.4891   TTTATTATTAGAAAA        CTCGGTGTATGGA GTT TCCTTACACTG-G        TCTCCATACAAATTC  63 360
   CPE1_0723  821457 ..  821477 -  -2.5   -2.9838   GGGAAAAAGGAAGGA            GTGATCGAT CCA AGCAACCAC            TGGGAAGCACGCACT  43 84
       adk_1  818373 ..  818391 -  -5.2  -2.87132   GTTTCCTCTCAGACA             CCTATGGG ATG CCTACAGG             TCCCCAATTACTCAT  50 356
        fumC  815420 ..  815431 -  -3.6  -5.47218   CTGGAGTGAAAAAAA                CCCC ATTA GGAG                 ATCTCAAGCGTTATC  84 141
   CPE1_0715  812334 ..  812347 -  -2.5  -4.11456   ATCATTAAAAAAAAT               TTTTA ACAC TAAAA                TTCTTTAGAATCATG  55 36
   CPE1_0714  810415 ..  810446 -  -4.7  -5.04601   TTCATAAACTAAAAA     GAGCC--ATTGAAAA TTAA TTTTCAATTTGGCTC      TTTTTTTTAATTTAA  77 56
        ispH NONE
   CPE1_0712  808315 ..  808334 -  -4.4  -4.24786   CCGAGAAGAGAGAAA            GCAGCTTTT AGA AAAAGCT-C            AAGATCTCGTAAACA  63 464
   CPE1_0706  802692 ..  802707 -  -2.4  -4.44797   CGAGTAACAGGAAAA              GGCTCA AAAA CGCGCC               TTGTCCCTCTAGGAT  60 387
         pgi  800215 ..  800230 -  -5.4  -5.08015   AACTCAAAAAAGAAA              GGCATC AGCA AATGCC               TAGATAACTTTAACT  79 304
        mdhC  798693 ..  798706 -  -2.4  -2.56596   TTCTCCATCAATCTA               GCTT AAAGTG AAGC                GACATTAGCTTTTTC  39 14
   CPE1_0702 NONE
        dapB  780405 ..  780417 -  -9.1  -2.60075   TTTTTTTTAAGCAAG                GGGTG TTA CACCC                TTGAAAGAAAGCTTT  72 4
         asd NONE
        lysC  777984 ..  777998 -  -3.6  -3.38046   TTTCCACCTTAAATA               TCTTGT TTT ACAAAA               TCGTTATGCAGCTGT  51 4
        dapA NONE
   CPE1_0681  776404 ..  776414 -  -6.8  -3.26722   TTTACAGGTATAATA                 GAGG TAA CCTC                 ATCACTTTTGGAAGC  61 312
   CPE1_0680  775276 ..  775306 - -14.9  -5.28176   TTTATCCACAAAAAA       GGCCTTTCCTCTT AAAAA AAGAGAAAAGGCC       TCGCGATTCCTTAAA 100 51
   CPE1_0679  772250 ..  772298 -    -4  -3.45527   AAAAGGAGGGAAATA TTTCCTATGGAGTTTTCC-TAAA GCAA TGTATGGACAACTCCATAGGGTA GTTTAAAAATTGATT  51 28
   CPE1_0678  771586 ..  771601 -  -6.1  -4.38774   AATATTATACTAAAA              GCCCT CTCCCC AGGGC               TTTTTAAATAAACGT  72 52
        trpR  771094 ..  771119 -  -3.9  -5.30155   TTATGAACGAAAAAA         TTATCGGGCGG ACGC CCACCAGAAAA          AGTGGCATACTCTAG  76 89
        trpD NONE
        trpC NONE
        trpF NONE
        trpB NONE
        trpA NONE
        kynU NONE
        prsA  763907 ..  763929 -    -4  -4.25104   GTTTCTTTATCAAAA           GCTGATGGAG AAG CCCCTTCATC           AAAGTATTTTTGATG  63 505
        infA  762321 ..  762332 -  -2.2  -2.81509   GAAAACAGTTAACGA                TGCC TATA GACA                 ACTCTAGCCTTTGTA  41 7
         tuf  760799 ..  760810 -  -4.4  -4.58466   TTTACAACCATAAAA                CACT AACG AGTG                 CGGAGGGAGTCGAAC  67 151
        secE  760529 ..  760543 -  -2.1   -2.6805   TAAACATGAACTAAC               CAAAC AAAAA GCTTG               TTATACTACCCATAA  40 6
        nusG NONE
        rplK NONE
        rplA NONE
        rplJ NONE
        rplL  757727 ..  757745 -  -3.2  -5.26247   TGAAAAGAAACAAAA             CGAAAA TTTTATG TTTTCG             CTTTTATGCTACAGC  74 34
        rpoB NONE
        rpoC  749596 ..  749607 -    -3  -5.86965   AGCTATCAAAAAAAA                TGAT TACT ATCA                 AGGGAGGTTTGGCTC  89 74
         tal NONE
   CPE1_0653  748041 ..  748076 -  -9.2  -2.64099   CCTTTTCATTAGAAG    CTTCAAAAATTCCATC AGGG GATGCAATCCTTGAAG     AAGCTTTAAAAAAGT  68 63
        atpE  746557 ..  746575 -  -2.4  -3.97741   AGACAAAAAATAATA             TTGAGTCA TGA TAACTCTA             AAATTAGTTGCAGAT  52 66
   CPE1_0650 NONE
        atpA NONE
        atpB NONE
        atpD NONE
        atpI NONE
        atpK NONE
   CPE1_0644  739151 ..  739172 -  -5.1  -4.53349   TAATCATCAAAGAAA           TCGAATCCC ATTA GGCATCCGA            GAATTCATCTACTGA  69 14
        valS NONE
        pknD  733075 ..  733087 -  -9.1  -3.37091   ATTCGGAAAATCCAA                CCTGC TTT GCAGG                CTCTGCAACAACTAA  71 405
         pyk  726204 ..  726235 -    -3  -4.59773   TCTTACCCTTAAAAA      GCTACCATG-ACCTC TTA GAGGTGCCTAACAGC      TTCGTGGCTGTTTTT  65 196
        cydA NONE
        cydB  719577 ..  719593 -  -5.9  -3.23853   CTTTCTCAAGGAAGA              GAAAGCT TTG AACTTTC              ATTATTCAAACTCTG  57 363
   CPE1_0631 NONE
        ileS  711921 ..  711932 -  -4.4  -4.58395   CTTATTTCCTAAAAA                TGAG AATC CTCA                 AAATCCACGAACTCC  67 7
        rpmE  708673 ..  708699 -  -2.3  -6.09133   GATTTTAAAAAAAAA        GCTCGCCA-AAC ATAT GCTATGACGAAC         CTTTTACATGATAGA  87 54
        prfA NONE
        hemK NONE
         ffh NONE
        rpsP NONE
        trmD NONE
        rplS NONE
        rnhB NONE
         gmk NONE
   CPE1_0617 NONE
        metG  700009 ..  700025 -  -5.1  -4.86216   ACAAAAAACAACAAA              GTACAAC ACC GCTGCAC              GGGACTTGTCAAAGC  75 177
   CPE1_0613  695435 ..  695456 -  -2.9  -4.24342   CCTCCTAGGAAGAAA           TGAAGTCGA GGAG TCGTCTACA            TTAGATCGAGAAGAC  59 464
        rpiA NONE
   CPE1_0604 NONE
   CPE1_0603  686823 ..  686841 -  -2.5   -3.2032   CCTCCATACTAAAAT            TGCGCTTA TTCT TAAG-GCA             TCTTAGTTTTAATGG  45 51
        hemL NONE
   CPE1_0601 NONE
   CPE1_0600 NONE
   CPE1_0599 NONE
        clpB  680284 ..  680300 -  -2.9  -4.25104   CCTTCTCGATGAAAA              GATAGGT AAG ACCTTCC              ATCTTGCTCTAGGAG  59 191
   CPE1_0596  677483 ..  677496 -  -5.3  -4.29073   TAATAAGCGAAGAAA               GCATT GCAT AATGC                TACAAAACAGTAAAC  69 76
   CPE1_0595  676703 ..  676729 -  -8.2  -5.90231   AGAAACACAAAAAAA         GAATGTTAGA GAAAACT TCTAACATTC         TTTTGCTCAGGAAAC 100 74
   CPE1_0594 NONE
        ligA  672689 ..  672699 -  -2.6   -2.8978   ACGCTTATATTAAAG                 TTAA AAA TTAA                 ATGGAAACTACAGAA  42 99
   CPE1_0592  668025 ..  668045 -  -5.3  -4.68511   CTCAAGATAAAGAAA            TTCAAGGCC CTG GGCCAGGAA            TGCGTGCTGCTGATA  73 298
        leuS NONE
        gseA  661556 ..  661586 -    -4  -6.23317   ACAAAAACAAAAAAA      CGGAGTGCACTGA GGAGGT TCAG-GCACCCCT       AAAACTTATACTCTT  95 243
        argR  642984 ..  642995 -  -4.4  -4.09117   TTTATTTACAAACAA                GCAT AATT ATGC                 GGTTATGCACAACTA  62 28
        glnP NONE
   CPE1_0569  641564 ..  641574 -  -3.2  -4.79657   ACAAGACCAAGAAAA                 CCAC CCT GTAG                 ATCTCTATGTCTTGC  68 72
         rpe NONE
   CPE1_0562 NONE
        accB NONE
        accC  630027 ..  630042 -  -6.2  -2.82082   ACGAAGTATCAACCA              CTTCAT ACAC ATGAAG               ACGAATCAAAAAAGT  56 143
   CPE1_0559 NONE
   CPE1_0558 NONE
   CPE1_0557  626957 ..  626967 -  -5.4  -3.91638   AACAAAAAAAATATA                 TGCT AAC AGCA                 GCGAACTGAATATTG  63 339
   CPE1_0555  624375 ..  624385 -  -5.4  -3.97947   CTTATCGATCATAAA                 TCTC CAG GAGA                 TATGCTCCTCGACAT  63 214
   CPE1_0550  598885 ..  598899 -  -2.2  -4.70583   CTTACCAAGATAAAA               CAATAA TGA TTATTA               TCCCATGATTTTTAA  62 145
   CPE1_0549  595876 ..  595917 - -18.9  -6.07627   ACTTGCAAAAAAAAA CCTCCCCAGGAAACAGTAA AAGA CCACTGTTTTCTGGGGAGG  GGAGTGCTAAAATAT 100 48
   CPE1_0545  590695 ..  590705 -  -2.4  -4.92669   TATATAAAAAAAGAA                 CCAG GAG CAGG                 GGAAAATAAGCGATA  65 192
   CPE1_0544  589759 ..  589783 -  -9.9  -4.62163   AGAGAAAAATAGAAA          TACCCCCTCGG GAA CCTTGGGGGTA          TTAGAATAAAAAATA 100 57
   CPE1_0543  589078 ..  589090 -  -3.5   -3.4096   AAGATATTGGAAATA                TTTTT AAT AAAAA                CTAAAACTTACTTCA  48 142
   CPE1_0542  587654 ..  587668 -  -2.1  -3.39286   ATAGGAGGGGAAAGA               GCCTT TTATG AAAGC               CATAAATTTTTAGAA  45 129
   CPE1_0541  586399 ..  586412 -  -4.5  -2.79098   TGCATGCAGTAACCA               CTCCC TATG AGGAG                TTTATTCAAACTATA  49 449
         tgt  584727 ..  584756 -  -2.9  -3.88498   TTGCCATATACCAAA       TCTGCCTTC-AGGA AAT CCCTGGAATGCAAA       TCGATATTTGTGGAC  52 324
   CPE1_0536  582220 ..  582231 -    -3  -4.18802   ATAGATACTGTAAAA                GAAA GAAT TTTC                 ATGAATAAAGAGCAG  58 161
        kdsB NONE
        pyrG NONE
   CPE1_0527  575885 ..  575899 -  -2.8  -5.69068   CAAAAATAGAAAAAA               GTTCCT ATG AGGAAA               ATCTTCTCTAAAGGG  80 56
         zwf  574287 ..  574297 -  -5.4   -2.7395   ATAGATTCTCGAAAT                 CCTT TAT AAGG                 GCCTCCAATATCGCC  51 18
         pgl  573362 ..  573383 -    -3  -4.13767   GGCGGGAGTGCAAAA           CTCTCCAC CATCTT ATGAAGAG            GTTGTAGGATCAACG  58 142
         adk NONE
   CPE1_0520  568996 ..  569015 - -10.8  -3.53444   CTATTGTTTTGCAAA            GCCTTTCT TTAA AGAAAGGC             TTTTCTTTTTTTGGG  89 14
   CPE1_0514  563710 ..  563722 -  -4.9  -3.85698   CTTCCTTGGGAGAAA                TTTGA TAA TCAAA                GCTATAACACTACGG  59 405
   CPE1_0507 NONE
        surE  558894 ..  558904 -    -4  -3.51825   TTAGTTTAACCACAA                 TCAT TTT ATGA                 TAATTAAACATAAGA  51 62
   CPE1_0503  557554 ..  557565 -  -2.2   -4.5442   CTCTTAAGGAGAAAA                GAAC TTTA GTCC                 TTGTCCCGAGAGAGG  60 238
   CPE1_0500 NONE
   CPE1_0499  554098 ..  554116 -  -3.1  -4.38666   AGATTTAAAAAAACA             TCTTTCC TATGC GGAAAGT             TTGGGAGTTCTATCC  61 276
   CPE1_0496  551160 ..  551171 -  -2.2  -4.64861   TTTTCTTAAAAGAAA                GAGA GATA CCTC                 TTCCTGATCAGGAAG  63 431
   CPE1_0484 NONE
   CPE1_0483  536572 ..  536599 -   -15  -2.69813   AGTACAGAGGATAAG        CAGCCATCTCCT TAAA AAGAGATGGCTG         TTGTTCAGTTATACT  95 34
   CPE1_0478 NONE
   CPE1_0477  527220 ..  527231 -  -4.4  -2.85378   AACTAGATGATGACA                TGAG CTCC CTCA                 CACTTAATTGTTCGG  48 109
        incB NONE
        incC  526040 ..  526059 -  -3.6  -3.14053   TTAAAGCATTTAATA            TCAAGG AAGCTGGG CCTTGA             TTTTGTGCTTATTTT  47 48
   CPE1_0474 NONE
   CPE1_0473  522594 ..  522609 -    -4  -3.15249   GAGATTTCTGAGGAA              GAAGCT GAAA AACTTC               GTACTGTTGGGGATG  49 171
        recR  518846 ..  518859 -  -3.9  -3.35438   GACTATATGTCACAA               TTAGA AATG TCTAA                GCCTTTTACCAGTTT  51 82
   CPE1_0467  516319 ..  516330 -    -3  -3.84451   CTTTTTAAATCTAAA                TGAT CATT ATCA                 AGGGAAACACGTGTT  52 70
   CPE1_0466 NONE
        lpxD  514371 ..  514381 -  -2.6  -3.08812   TTCTTTTGAACAAAC                 TTTT ATA AAAA                 ATCCTATAGCTTTGC  44 322
        pdhA NONE
        pdhB NONE
        pdhC  509725 ..  509753 - -10.3  -2.52464   TTCGCTTTGAATGGA        GCTCTAACCATAG GCA CTATGGATGGAGC        AAATATAGAAATGGC  73 464
   CPE1_0459  506698 ..  506710 -  -4.1  -3.49516   AAGATGATATTAGAA                CCCTT TTA AAGGA                TGTTTTAGAGATTGC  52 396
   CPE1_0455 NONE
        acpS  501311 ..  501324 -  -3.1  -2.89079   AAGACAAGCATTACA               GGCAA GCCA TTACC                TCTGCAGGAACTGGG  43 71
        rpsA  498489 ..  498518 -  -4.4  -4.02535   TTATAAGTAAGGAAA       TAGAGAGAGTAT AATGAA ATACCCTCTATA        AAATTTTAATATTCT  59 39
        nusA NONE
        infB  494557 ..  494576 -  -3.6  -3.24924   TTCCCACTCATAATA            CGCAAA CTATAATT TTTGCG             GGTGATAGATGATCT  49 12
        rbfA NONE
        truB NONE
        ribF  492198 ..  492218 -  -7.6  -3.05022   CTGCGTACAGATAGA            GGAAGAGA TTGTC TCCCTTCC            TGTTGAAGAACGTCA  62 368
   CPE1_0445 NONE
        lcrD  487978 ..  487990 -  -4.9  -3.81951   TTTTACAGCACTAAA                GATTT AGA AAATC                TGAATTCTTCCTAAA  59 16
   CPE1_0443 NONE
   CPE1_0442 NONE
        malQ  484624 ..  484634 -    -4  -3.40907   GTACATTAAGAGGAA                 TCTA TAT TAGA                 TCTTTCACGATATAT  51 124
        rpmB  484269 ..  484294 -  -4.1  -3.74227   ATAAAGACATAAATA         TTCCTCTTTTT AGGA AAATAAAGGAA          GAAGACTAGAGACCT  57 31
   CPE1_0439  482514 ..  482532 -  -3.2  -3.54488   TCTTTTTAAAGAATA             TCTTTTTA ATC TAAAATGA             TTTAGGGAAAAACTC  50 17
   CPE1_0438  481064 ..  481097 -  -4.7  -6.34616   GGAAAATAAAAAAAA     TCGCCATCGATTTAA ATTG TTAAATCAAAAGCAA      GTAAAGGTGTTTCTT 100 320
   CPE1_0434 NONE
        folD NONE
        apbE  475892 ..  475903 -  -7.2  -3.06564   ACTAGAGAAAAAGAG                CGCG AGAT CGCG                 GCAGCTATGAAGCGC  63 30
        dnaN NONE
        recF NONE
   CPE1_0428 NONE
   CPE1_0421  463918 ..  463951 -  -9.8  -3.51442   GATAAGAATAGAACA     CTTGATAGACAG GACTTTTTAT CTGTCTATCAAG      TTTTTTTTAGACAAA  81 32
       adt_1  462139 ..  462166 -   -20  -5.14645   AGAACGTAAGAAAAA        GCCCTGCTTCAC ATTT GTGAAGCAGGGC         TTTCTTTTTATGAAG 100 64
        lepA NONE
   CPE1_0411  450844 ..  450857 -  -5.3  -3.63078   AAATTAATTATACAA               CTACT AACC AGTAG                AATTATAACAGTTTA  59 252
   CPE1_0410 NONE
   CPE1_0409  449236 ..  449260 -  -3.1  -3.50045   AGGGAGATACCATAA          TAAATTATT TTTTCTG AATAATTTA          AAAAAGGTGCGATTT  48 105
   CPE1_0408 NONE
        gcpE NONE
   CPE1_0406  445944 ..  445958 -  -4.2  -4.20084   ATTATCGATGGAAAA               GAAGCC GTA GGTTTC               CTTGTTAAGGTGAAA  61 88
   CPE1_0403 NONE
        hemN  440251 ..  440261 -  -3.2  -3.95535   AGAACGTGAAAAATA                 CCTC AGA GAAG                 TTGTGAGAAAGGGGC  56 276
   CPE1_0395  432748 ..  432766 -    -6   -2.9348   TTTAAATGGGATACA             GTATCACG GAG CGTTATAC             ATTCACAGAACTGCG  54 474
         dcd  430594 ..  430607 -  -5.3  -4.63007   CAGAACTATACAAAA               GGAAT AGTA ATTCC                TTGTTGCTTTTGGTA  71 2
   CPE1_0391 NONE
   CPE1_0390 NONE
   CPE1_0389  427665 ..  427677 -  -7.7  -3.70417   ACCACAGCATTTAAA                TCCCT CGT AGGGA                TGGGAGTTTCCCAGG  70 148
   CPE1_0386 NONE
   CPE1_0385  423533 ..  423559 -  -5.2  -3.17194   AGTTGTGGAAGCCAA         GCCTAAGAAA GAGGTGA TTTCTGAGGC         TGGAGATGTATTGAC  53 413
        rluC  421335 ..  421346 -    -3  -3.40403   TTCTGGTCATCATAA                TCAA ACTT TTGA                 TGAAGAAGATTGTTG  48 57
   CPE1_0378  414690 ..  414726 -  -6.6  -3.61398   TCTGCGCCCCAAGAA   CTGCATGGGATCGC-AGA TTT CCTTGCGCCCCCA-GCAG   AAGAAAAGGGCATTC  65 83
   CPE1_0376  413118 ..  413133 -    -4  -3.08996   TATTTTGATTTAATA              TCCATG TTGT CATAGA               GGAACTCTCCAAATT  47 63
   CPE1_0375 NONE
      dnaQ_1 NONE
   CPE1_0373 NONE
   CPE1_0372  410188 ..  410205 -    -2  -4.12599   AAGAAGCTGGGAAAA             GCCTGTC TGGAG GACAG-C             TTCAGCGCTTAACGA  55 338
   CPE1_0361 NONE
   CPE1_0360  398881 ..  398893 -  -4.1  -4.78572   CTTTAAGGAAGAAAA                TGCCA ATG TAGCA                TTGCTATTGATAAGC  70 119
        dnaA NONE
   CPE1_0358 NONE
        nqrB NONE
        nqrC NONE
        nqrD NONE
        nqrE  392281 ..  392296 -    -9  -2.55624   TTAGGAAGCAAAACC              CTCTCG TGCT CGAGAG               ATTCCCTGAAGTGTT  68 40
        clpC  383770 ..  383782 -  -3.4  -3.15249   TAGATCTTGGAGGAA                CAAG TAAGC CTTG                TTATGTTGTTGGTAA  46 331
   CPE1_0344 NONE
   CPE1_0343  381113 ..  381147 - -10.2  -4.25056   GATCTTATTAAGAAA     GTAGAAAGAAATAGCT AAC AGCTATTTCTTTCTTG     ATTTTTTGAACCACA 100 12
         rnc NONE
        radA NONE
        hemC  369572 ..  369585 -  -8.1  -2.73676   GTCAAAGTAAACCTA               CCCTC TAGA GAGGG                TTTTTAAAAATTTTT  66 92
   CPE1_0330  369083 ..  369094 -  -2.2  -3.79849   GAAGGAGATGAAGAA                CACT GCTT AGCG                 ACATCCGAAAAGAAT  50 56
        dnaX NONE
   CPE1_0328  367286 ..  367312 -  -5.1  -4.66609   CAGCCCAGGCAAAAA         CAAGCAGAGAA ATTCG TGCTCTGCTAG         ATTAAAATGGAAAGA  72 27
   CPE1_0324 NONE
   CPE1_0323  361732 ..  361758 -  -5.9   -2.9703   ACAAAAAGAAAAACT        TCTGCAGGCAGC CAAA GCT-CTTGCAGA         TTTTTAAAGATCTTT  57 42
         lon  354599 ..  354636 -  -6.4  -2.61144   TTACTTGCTAAAGAT   CCTGAAATAGCTCCAGC TTTTT GC-AGAGCTATTTCTGA   GGAAAGGCAATTTTG  57 16
   CPE1_0317  353707 ..  353725 -  -2.5  -2.88386   ATACTCTACAAGAAC            TTCTTCTC TACA GAGA-GAA             CGCGGCCTCGATTAT  42 37
   CPE1_0316  352671 ..  352687 -  -2.2  -5.02606   TAGGAAAGAATAAAA              GGCTGA GATCA TAAGCC              GTTACATGGTCTTTT  67 65
   CPE1_0315  351686 ..  351696 -  -5.4  -2.75992   TTTTATCTAATACTA                 TGCT CAT AGCA                 CCTACAATAACAAAG  51 73
   CPE1_0314 NONE
         maf NONE
   CPE1_0312 NONE
   CPE1_0311  345301 ..  345312 -  -7.2  -4.05446   GTGTTGAAGGAGAAA                CCCC TGAT GGGG                 AGTTGATCTTCTGTG  72 375
        xseA NONE
        xseB NONE
   CPE1_0305 NONE
         dxs  338819 ..  338835 - -10.9  -3.28712   TTCTTTGTTCTATAA              CTCTCCA TAC TGGAGAG              TGTCTTCCGGAGTTG  86 465
   CPE1_0297  330278 ..  330297 -  -2.1  -4.25104   TCGCTGTCATTAAAA            GATGTTG AAGCAG CAACTTC             CATACGTTGTTCTTG  58 401
        rnhC  329074 ..  329086 -  -2.7  -2.98122   TACCATCTAAATAAT                TTCCT GTG AAGAA                TATCAGTGTTTTATC  43 115
   CPE1_0294  328025 ..  328038 -  -3.9  -2.53964   GAGCAGAGAATAGAG               CTTTT TTTA AAAAG                AGATTTTTACCGAGC  45 18
   CPE1_0293  327300 ..  327314 -  -3.5  -4.20769   ACATCGCAAGAGAAA               CCCAC TTGAT GTGGA               GAATGAATTATTTAA  57 160
   CPE1_0292  326101 ..  326115 -  -5.8  -2.89683   ACGTCATTCCATAGA               TAAAGA AGC TCTTTA               TTTTTTATTTCTAGG  56 23
   CPE1_0288  321973 ..  321993 -  -6.9  -5.57054   AATAAGGTAAAAAAA            TATAGGAAG TGG CTTCCTATT            TTGAATGTGCTGGCA  93 135
   CPE1_0287  317693 ..  317718 - -14.8  -2.55351   GTTTGCTATAGGAAT         GAAGAGCCCC AAGATA GGGGCTCTTC          GTCTTTTTAGAAATA  95 32
   CPE1_0286 NONE
   CPE1_0285  311781 ..  311801 -  -4.1  -4.05035   AAAAAAATTAAAATA            TTTTTCCTG ATG CAAAAAAAA            AAAAAAAAACAACTA  59 60
   CPE1_0284  309029 ..  309059 - -13.5  -4.98531   CTCGTAAATGAAAAA       CCCCCTTATTCTT GAAAT AAGAATAAGAGGG       TTTTAAGGAAAAGAA 100 50
   CPE1_0283  305457 ..  305485 - -11.9  -3.68023   AATGCCGAAAAGGAA        CCTAAGGTAGA TATAGAG TCTACCTTAGG        AGAACACATTAGAAA  91 34
   CPE1_0282  302884 ..  302905 - -10.2  -5.14985   TCAAAGAGAGAAAAA           GATCGGCA GCTAGA TGCCGATC            TTTTAGGAGAGTTAG 100 37
   CPE1_0281  299874 ..  299886 -  -3.4  -3.99805   TGTCAAAAATTTAAA                CTCT CGTTT AGAG                GAAAAGAAAAAACAT  56 141
   CPE1_0279  297177 ..  297202 - -12.1  -4.28049   CTTAAAATTTCAAAA         GGCTTTTTTTT AGAA AAAAAAAAGCC          TAGGATCTAAGTATT 100 61
   CPE1_0278 NONE
   CPE1_0277  290906 ..  290923 -  -2.7  -3.08133   GATGTAGGCATGGAA             TGGGAAT GAAG ATTCCTA              CAAAGTGATTGTATC  43 75
   CPE1_0276 NONE
   CPE1_0275  284726 ..  284737 -  -5.8   -3.0094   CGCGATTCAGATACA                CCCT CCTC AGGG                 GTTTCTGCAGGAAGG  54 391
   CPE1_0264 NONE
   CPE1_0263  266985 ..  266995 -  -3.2  -3.92324   TGTTTTAACATTAAA                 CCTC CAA GAGA                 AAACACGCAGTTTTT  55 115
   CPE1_0262  266743 ..  266778 - -11.2  -4.20918   CCCAAGGTGAATAAA    GGCTCCATCTCTTGGC TTAA GCCAAGAGATGGAAGA     TTAAGAGTTATTCAA 100 33
   CPE1_0260  264768 ..  264800 - -11.3  -3.51232   TGTTGCCTAAATGAA     TCCCCCTCGCTGCG CAGCGC CGCAGCG-GGGGCA      ATATTTGCTCTGTAT  89 62
   CPE1_0256 NONE
   CPE1_0254 NONE
   CPE1_0253  256043 ..  256060 -    -7   -3.3581   ATGATCCCCAAAAAG             GTGCAG GAGAAG CTGCAC              GTATGGAGAAGTTAA  66 37
        proS  251438 ..  251458 -  -2.5  -2.55551   GACAACCGCAATTGA            GAGCATTAT AAG AAAAAGCTC            TATGAAGGTCAAGAA  41 72
        hrcA NONE
        grpE  249688 ..  249700 -  -6.3  -3.04144   TGTTCATGGTGAATA                CCTAA ATC TTAGG                GGTTATTTTCTTTAT  59 21
        dnaK  247659 ..  247688 - -15.1  -5.08824   TTCGGAGGGAAAAAA       GTTCCCTATCCCC AAGA GGGGATAGGGAAA        AAAGAGATTTATTCG 100 34
   CPE1_0245 NONE
   CPE1_0244 NONE
   CPE1_0243  244154 ..  244171 -  -3.5  -3.18115   TTCCTAGAAAATAAG             TGAAAAA GACT TCTTTCA              AGAAAAAGAGAATAA  47 75
   CPE1_0242 NONE
   CPE1_0241 NONE
   CPE1_0240 NONE
   CPE1_0239  242034 ..  242054 -  -6.1  -2.71712   GGGGTTCCCCTAAAT            GTGATGAGA TTT TCTCACCTC            CTCACTCTGAGGAAT  55 27
        rsbV NONE
   CPE1_0237  239706 ..  239723 -  -2.7  -3.87792   AAACCAAAAAGAACA             GCGTCAT CACG ATAACAC              CCTACTGTAACTTTA  51 46
   CPE1_0236 NONE
   CPE1_0235 NONE
        ubiE  236463 ..  236482 -  -7.9  -3.67517   GATGAATAGGCGAAA            TCAGCCT ATGGTG AGGCTGA             CAGCTTATGAGAAAG  70 525
        hemD NONE
   CPE1_0227 NONE
   CPE1_0226  228458 ..  228470 -  -6.3  -3.90762   TAGTTTCTAAAAATA                CACTT GCA AAGTG                ATGAAATTGGAAACA  69 157
   CPE1_0225  227357 ..  227374 -  -8.5  -2.94298   TTATGAAAAAACTTA             TGAGAAG AAAA CTTCTCA              ATTTTGCAGAAACAA  69 305
        nrdR NONE
        dksA NONE
        lspA NONE
   CPE1_0214  217251 ..  217274 -   -14  -4.96996   TTTAAACAAAAGAAA          CAAAGCCTTC ATAT GAAGGCTTTG           TAAAGATAATGTAAA 100 59
   CPE1_0213 NONE
   CPE1_0212  216411 ..  216438 -    -2  -2.85286   ATGGAAATAAAAATT        TGATCCTAGA AAGAAGAA TCCAGGATCT         TTTGAGAAGCTATGT  41 69
   CPE1_0211  213438 ..  213458 - -11.2  -5.10461   GTTAGGGAAGAAAAA            GCTGGGTT ATACA AACCCAGC            TAAAAATAGAGAAAC 100 56
   CPE1_0210  208092 ..  208120 - -14.8  -3.91908   ATATTGCGAAAAATA        GAGATGATGAGA TATCT TCTCATCATCTC        GTTTTTTTGGAGAGA 100 134
   CPE1_0208 NONE
   CPE1_0207 NONE
   CPE1_0206  205052 ..  205069 - -11.3  -2.67803   CCCCCACCAAAGCTA             CTCCAGG GACT CCTGGAG              AGTGCCGTCAAGTGG  83 495
        ispF  202834 ..  202849 -  -7.6  -4.27617   GATATTCTAGGAAAA              GAGCAT GTTC ATGCTC               TTAAAGAAGAACAGC  79 57
   CPE1_0194  196880 ..  196895 -  -4.8  -2.81173   ATGAACTTGAGCAGA              CTTTTT CTAA AAAAAG               AAAAGCTTCCTAATC  51 66
   CPE1_0193  194840 ..  194862 -  -7.8   -4.3467   ATCTTTATAGGAAAA           TAAGGAGG TAATAAG CCTCCTTA           TTTAGAGGACAAAAG  81 23
   CPE1_0189  191066 ..  191090 -  -3.6  -4.62904   AAATATCTCGAAAAA          GCTGATCTCT GGGTA AAAGATCAGT          TTTATCTTGGCTCCA  67 291
        uppS NONE
        cdsA NONE
         cmk NONE
   CPE1_0178 NONE
        argS  173516 ..  173529 -  -3.8  -4.72272   TTCTTCCAGGAAAAA               CCTC TGCAGG GAGG                AGTTGTTATAGAGAC  67 470
   CPE1_0175  169415 ..  169434 -  -4.2  -3.74697   ACAGATAATAAAAAT            CGCACAGC TTCA GATATGCG             CATAGCAGTAAACAA  57 427
   CPE1_0170  166340 ..  166370 - -11.2   -4.7373   CCACCCTATTAAAAA       GACTTCCTCGTTAT AAG AAAACGAGGAAGAC       GCAAATTTAAAGCTA 100 67
   CPE1_0169 NONE
        ispD NONE
        truA  163639 ..  163651 -  -9.1  -3.14132   GGGTGTGGTGACGAA                CTCCC CTG GGGAG                GCTGTCATGCGTTTG  74 301
   CPE1_0165  162510 ..  162526 -  -3.7  -3.04263   ACCTTATTGCTAAGA              GTAGATT TTG AGTCTAC              CGCGTCTACCATTCC  47 119
   CPE1_0163 NONE
   CPE1_0162  160616 ..  160628 -  -4.9  -4.24342   CCCTGTACCAATAAA                GATAA GTA TTATC                CTACACTGTTGTCTT  66 404
   CPE1_0160  156780 ..  156796 -  -9.5  -4.47271   GAAACTCAAGTAAAA              CTCCTTA GTT TAAGGAG              AGCATTTCCTTCGTC  93 13
   CPE1_0158 NONE
   CPE1_0157 NONE
        recO  154279 ..  154289 -    -4  -2.52795   AATTTTTCCAAGCTA                 GAAA CAA TTTC                 TTATCTGGGCTCTTT  45 342
   CPE1_0153 NONE
   CPE1_0152  152605 ..  152623 - -13.2  -2.57881   GAATTGTCTCAGAAC             TCTCCTCC TGT GGAGGAGA             ACTCTCTTTTTCGGG  91 98
        pheT NONE
   CPE1_0149  148259 ..  148269 -  -3.2  -3.61232   TCGTTCATAGAAAGA                 GAGT CTT ACCC                 TGCAGCATTGAGACG  50 20
         ada NONE
        hemH  139072 ..  139094 -  -9.2  -2.73529   CTCCATACAAATCTA           TAAACGACCT TAA AGGGCGTTTA           ATTGGGGTGTATAAG  70 370
   CPE1_0136  134715 ..  134726 -    -3  -3.90744   CTTTCTTTGAAAGAA                TAAG TCTA CTTA                 GATAGCAACTCTTGA  55 19
        dnaB  124470 ..  124484 -  -4.3  -3.04836   TATCAGCACAAATCA               TCTTG GCACG CAAGA               ATTCTTTCTTTACAG  50 178
        gidA NONE
   CPE1_0126  121456 ..  121475 -  -4.2  -4.25104   TTGCTGCTATGAAAA            TGCTGCAG ATGT CTACAGCT             GTTGCTGAGGGATTT  63 336
        trxA   95412 ..   95448 - -11.2  -3.16683   ATCGTATTGTACGAA    GTTATAAGGCAAAATT ATGCA AATTTTGCCTTATAAG    CTTTTTAAGCGTGTT  87 30
        uhpC NONE
        dnaE   85087 ..   85102 -  -3.3  -2.54325   TGGTCTTAAATACAG              GAACA TGGAGT TGTTC               TAAGGGTTTTCAAGA  42 510
   CPE1_0076   83589 ..   83603 -  -2.9  -2.76492   TCACGCATGCCAAAC               CTTTT TTAAG AAAAG               TATTTGGAGATTCTC  41 16
   CPE1_0075 NONE
   CPE1_0074   82529 ..   82550 -  -6.7   -3.2234   GAGATCAAAGATACA           GAAATGATGC TGC GC-TCATTTC           GCTTCTCTCAAGATT  61 57
   CPE1_0072   80400 ..   80412 -  -4.8  -2.93252   ACTTCTGAAGAACTA                CTGC CGTGT GCAG                AGAGAGATTCTTGCC  50 370
        dppD NONE
        dppF   70538 ..   70570 - -12.1  -2.86164   TTTCTAACGATCACA      GCCTAAAGGGTTCCC TGA AGAAACCCTTTAGGT      ATCTGTGGGTGTAGA  84 20
   CPE1_0061   68645 ..   68655 -  -5.4  -3.28712   GGCTCTTCTTGAGAA                 GAAC TTG GTTC                 TGAGGAGGCTTCTGA  55 79
   CPE1_0060   67769 ..   67787 -  -7.5  -3.28924   GATGCTGTTGCACAA             CTAAGGA GGTAA TCCTTAG             AATGACTTTCTTTTT  67 39
        ompA   56713 ..   56735 -  -9.2  -5.60993   TTGCGCATAAAAAAA           CCCAGAAGAT GAG ATTTTCTGGG           CTAGAAACCAGAACA 100 89
        rpsB NONE
         tsf NONE
        pyrH NONE
         frr   53080 ..   53091 -  -2.2  -5.55769   TCCCATAAGAAAAAA                GCTC CTTA AAGC                 TTAACTTCCCTTATC  74 384
   CPE1_0045 NONE
   CPE1_0044   51241 ..   51257 -  -3.7  -4.49389   ATGGTATAAGTAAAA              GTAGGAT GGT ATTCTAC              GCCATGGAATAGCTT  65 266
   CPE1_0029 NONE
   CPE1_0028   33596 ..   33607 -    -3  -3.63515   TTTTACTCCGAATAA                GAAA TATT TTTC                 TATATTCGCTAGAAT  50 83
   CPE1_0027 NONE
   CPE1_0026   32894 ..   32920 -  -2.2  -4.40561   TTTGTTTAAAAAGAA         TTTTACGGAGAA CGT TTCTCCGAGAGA         CAGCTTTTCAGGAGA  57 44
        rluD   31793 ..   31805 -  -3.5  -3.24122   AAAAATCGAACTCAA                TAAAA TGA TTTTA                ATATTTTTTAAATAA  47 59
   CPE1_0024   31373 ..   31395 -    -7  -2.89683   AGCTCAGTGGATAGA           GCATTCGCCT TCT AAGCGAATGG           CCGCAGGTTCGAATC  62 111
        kdsA   30334 ..   30348 -  -2.8  -4.43576   ACCACACACAATAAA               TCTTGT CAT ACAGGA               AGAAGATTTAAGGAT  58 16
   CPE1_0021 NONE
   CPE1_0020   28657 ..   28667 -  -6.8  -2.57092   AATTCTATTAATGGA                 GGGA TGT TCCC                 ACTTCAGGCGACGAT  56 490
   CPE1_0017   23429 ..   23445 -  -9.4  -5.34555   GTATAGCATAAAAAA              CGCACC AGAGA GGTGCG              TTTTTTTACTGGATG 100 66
   CPE1_0013   17224 ..   17236 -  -7.7  -3.56155   GAGCAAGACCAAATA                GAAGC CCA GCTTC                CTTTGCCTATTAATG  68 146
   CPE1_0011   15425 ..   15462 - -13.1  -4.65747   TAAGTTTTAAGAAAA   CTCCCAAAG-AAAAATAG AAA CTATTTTTTCTTTGGGAA   AAGAAAGAGCTGTTT 100 39
        recC NONE
        recB    7144 ..    7158 -  -2.9  -3.79874   GTGGATACAACAGAA               GATAA ACGAG TTATC               TTGCTTATTGGAATG  52 433
   CPE1_0003    2529 ..    2571 -  -4.4  -2.88571   CCCTGTAAAGATAAG TCTAATCCCTGAGATATAA CTATTT TCATACCTC-GGGATTATA GGCGTTTTTATAAGG  48 33
        nqrA    1069 ..    1080 -  -7.2  -3.73224   TTAGTTGGCATCAAA                CGCG CGGG CGCG                 GACATGATTGTTAGC  68 90
