CTDEC_0003	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTDEC_0027	PWY-6829	tRNA methylation (yeast)
CTDEC_0027	PWY-7285	methylwyosine biosynthesis
CTDEC_0027	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CTDEC_0030	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0039	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0045	PWY-5988	wound-induced proteolysis I
CTDEC_0045	PWY-6018	seed germination protein turnover
CTDEC_0054	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTDEC_0055	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTDEC_0057	PWY-7560	methylerythritol phosphate pathway II
CTDEC_0071	PWY-7560	methylerythritol phosphate pathway II
CTDEC_0078	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CTDEC_0078	PWY-2201	folate transformations I
CTDEC_0078	PWY-3841	folate transformations II
CTDEC_0078	PWY-5030	L-histidine degradation III
CTDEC_0078	PWY-5497	purine nucleobases degradation II (anaerobic)
CTDEC_0078	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CTDEC_0087	PWY-5941	glycogen degradation II (eukaryotic)
CTDEC_0087	PWY-6724	starch degradation II
CTDEC_0087	PWY-6737	starch degradation V
CTDEC_0087	PWY-7238	sucrose biosynthesis II
CTDEC_0093	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CTDEC_0093	PWY-6167	flavin biosynthesis II (archaea)
CTDEC_0093	PWY-6168	flavin biosynthesis III (fungi)
CTDEC_0100	PWY-6012	acyl carrier protein metabolism I
CTDEC_0100	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CTDEC_0108	PWY-5663	tetrahydrobiopterin biosynthesis I
CTDEC_0108	PWY-5664	tetrahydrobiopterin biosynthesis II
CTDEC_0108	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTDEC_0108	PWY-6703	preQ<sub>0</sub> biosynthesis
CTDEC_0108	PWY-6983	tetrahydrobiopterin biosynthesis III
CTDEC_0108	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CTDEC_0121	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTDEC_0121	PWY-5723	Rubisco shunt
CTDEC_0128	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0138	PWY-7533	gliotoxin biosynthesis
CTDEC_0182	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTDEC_0182	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CTDEC_0183	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CTDEC_0183	PWY-7177	UTP and CTP dephosphorylation II
CTDEC_0183	PWY-7185	UTP and CTP dephosphorylation I
CTDEC_0185	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CTDEC_0186	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CTDEC_0186	PWY-6855	chitin degradation I (archaea)
CTDEC_0186	PWY-6906	chitin derivatives degradation
CTDEC_0188	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTDEC_0188	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTDEC_0188	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0188	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CTDEC_0188	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTDEC_0188	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTDEC_0193	PWY-6700	queuosine biosynthesis
CTDEC_0205	PWY-1042	glycolysis IV (plant cytosol)
CTDEC_0205	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTDEC_0205	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTDEC_0205	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTDEC_0207	PWY-1042	glycolysis IV (plant cytosol)
CTDEC_0207	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTDEC_0207	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTDEC_0207	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTDEC_0210	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTDEC_0213	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTDEC_0213	PWY-5723	Rubisco shunt
CTDEC_0218	PWY-5381	pyridine nucleotide cycling (plants)
CTDEC_0218	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTDEC_0218	PWY-6596	adenosine nucleotides degradation I
CTDEC_0218	PWY-6606	guanosine nucleotides degradation II
CTDEC_0218	PWY-6607	guanosine nucleotides degradation I
CTDEC_0218	PWY-6608	guanosine nucleotides degradation III
CTDEC_0218	PWY-7185	UTP and CTP dephosphorylation I
CTDEC_0237	PWY-5367	petroselinate biosynthesis
CTDEC_0237	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTDEC_0237	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTDEC_0237	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTDEC_0237	PWY-5994	palmitate biosynthesis I (animals and fungi)
CTDEC_0237	PWY-6113	superpathway of mycolate biosynthesis
CTDEC_0237	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTDEC_0237	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTDEC_0237	PWY-6951	CTDEC_0237|fabG|YP_005811290.1|GeneID:12386869
CTDEC_0237	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CTDEC_0237	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTDEC_0237	PWYG-321	mycolate biosynthesis
CTDEC_0238	PWY-4381	fatty acid biosynthesis initiation I
CTDEC_0238	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CTDEC_0238	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTDEC_0239	PWY-4381	fatty acid biosynthesis initiation I
CTDEC_0248	PWY-5941	glycogen degradation II (eukaryotic)
CTDEC_0248	PWY-622	starch biosynthesis
CTDEC_0248	PWY-6731	starch degradation III
CTDEC_0248	PWY-6737	starch degradation V
CTDEC_0248	PWY-7238	sucrose biosynthesis II
CTDEC_0258	PWY-6823	molybdenum cofactor biosynthesis
CTDEC_0258	PWY-6891	thiazole biosynthesis II (Bacillus)
CTDEC_0258	PWY-6892	thiazole biosynthesis I (E. coli)
CTDEC_0258	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CTDEC_0265	PWY-4381	fatty acid biosynthesis initiation I
CTDEC_0265	PWY-5743	3-hydroxypropanoate cycle
CTDEC_0265	PWY-5744	glyoxylate assimilation
CTDEC_0265	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTDEC_0265	PWY-6679	jadomycin biosynthesis
CTDEC_0265	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTDEC_0285	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTDEC_0285	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CTDEC_0292	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTDEC_0292	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTDEC_0292	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0292	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CTDEC_0293	PWY-4381	fatty acid biosynthesis initiation I
CTDEC_0293	PWY-5743	3-hydroxypropanoate cycle
CTDEC_0293	PWY-5744	glyoxylate assimilation
CTDEC_0293	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTDEC_0293	PWY-6679	jadomycin biosynthesis
CTDEC_0293	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTDEC_0294	PWY-6854	ethylene biosynthesis III (microbes)
CTDEC_0295	PWY-6749	CMP-legionaminate biosynthesis I
CTDEC_0299	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTDEC_0299	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTDEC_0307	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0308	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0313	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTDEC_0313	PWY-5723	Rubisco shunt
CTDEC_0328	PWY-1042	glycolysis IV (plant cytosol)
CTDEC_0328	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTDEC_0328	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTDEC_0328	PWY-7003	glycerol degradation to butanol
CTDEC_0331	PWY-6891	thiazole biosynthesis II (Bacillus)
CTDEC_0331	PWY-6892	thiazole biosynthesis I (E. coli)
CTDEC_0331	PWY-7560	methylerythritol phosphate pathway II
CTDEC_0332	PWY-1042	glycolysis IV (plant cytosol)
CTDEC_0332	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTDEC_0332	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTDEC_0332	PWY-5723	Rubisco shunt
CTDEC_0332	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTDEC_0332	PWY-6886	1-butanol autotrophic biosynthesis
CTDEC_0332	PWY-6901	superpathway of glucose and xylose degradation
CTDEC_0332	PWY-7003	glycerol degradation to butanol
CTDEC_0332	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTDEC_0332	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTDEC_0361	PWY-2941	L-lysine biosynthesis II
CTDEC_0361	PWY-2942	L-lysine biosynthesis III
CTDEC_0361	PWY-5097	L-lysine biosynthesis VI
CTDEC_0362	PWY-2941	L-lysine biosynthesis II
CTDEC_0362	PWY-2942	L-lysine biosynthesis III
CTDEC_0362	PWY-5097	L-lysine biosynthesis VI
CTDEC_0362	PWY-6559	spermidine biosynthesis II
CTDEC_0362	PWY-6562	norspermidine biosynthesis
CTDEC_0362	PWY-7153	grixazone biosynthesis
CTDEC_0363	PWY-2941	L-lysine biosynthesis II
CTDEC_0363	PWY-2942	L-lysine biosynthesis III
CTDEC_0363	PWY-5097	L-lysine biosynthesis VI
CTDEC_0363	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTDEC_0363	PWY-6559	spermidine biosynthesis II
CTDEC_0363	PWY-6562	norspermidine biosynthesis
CTDEC_0363	PWY-7153	grixazone biosynthesis
CTDEC_0363	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTDEC_0364	PWY-2941	L-lysine biosynthesis II
CTDEC_0364	PWY-2942	L-lysine biosynthesis III
CTDEC_0364	PWY-5097	L-lysine biosynthesis VI
CTDEC_0366	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTDEC_0367	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTDEC_0368	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTDEC_0369	PWY-6164	3-dehydroquinate biosynthesis I
CTDEC_0370	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTDEC_0370	PWY-6416	quinate degradation II
CTDEC_0370	PWY-6707	gallate biosynthesis
CTDEC_0373	PWY-40	putrescine biosynthesis I
CTDEC_0373	PWY-43	putrescine biosynthesis II
CTDEC_0373	PWY-6305	putrescine biosynthesis IV
CTDEC_0373	PWY-6834	spermidine biosynthesis III
CTDEC_0376	PWY-1622	formaldehyde assimilation I (serine pathway)
CTDEC_0376	PWY-5392	reductive TCA cycle II
CTDEC_0376	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTDEC_0376	PWY-5690	TCA cycle II (plants and fungi)
CTDEC_0376	PWY-5913	TCA cycle VI (obligate autotrophs)
CTDEC_0376	PWY-6728	methylaspartate cycle
CTDEC_0376	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTDEC_0376	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTDEC_0376	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTDEC_0378	PWY-3801	sucrose degradation II (sucrose synthase)
CTDEC_0378	PWY-5054	sorbitol biosynthesis I
CTDEC_0378	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CTDEC_0378	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CTDEC_0378	PWY-5659	GDP-mannose biosynthesis
CTDEC_0378	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTDEC_0378	PWY-621	sucrose degradation III (sucrose invertase)
CTDEC_0378	PWY-622	starch biosynthesis
CTDEC_0378	PWY-6531	mannitol cycle
CTDEC_0378	PWY-6981	chitin biosynthesis
CTDEC_0378	PWY-7238	sucrose biosynthesis II
CTDEC_0378	PWY-7347	sucrose biosynthesis III
CTDEC_0378	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTDEC_0382	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTDEC_0382	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CTDEC_0382	PWY-6164	3-dehydroquinate biosynthesis I
CTDEC_0390	PWY-5097	L-lysine biosynthesis VI
CTDEC_0405	PWY-6167	flavin biosynthesis II (archaea)
CTDEC_0405	PWY-6168	flavin biosynthesis III (fungi)
CTDEC_0405	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0426	PWY-5198	factor 420 biosynthesis
CTDEC_0428	PWY-5839	menaquinol-7 biosynthesis
CTDEC_0428	PWY-5844	menaquinol-9 biosynthesis
CTDEC_0428	PWY-5849	menaquinol-6 biosynthesis
CTDEC_0428	PWY-5890	menaquinol-10 biosynthesis
CTDEC_0428	PWY-5891	menaquinol-11 biosynthesis
CTDEC_0428	PWY-5892	menaquinol-12 biosynthesis
CTDEC_0428	PWY-5895	menaquinol-13 biosynthesis
CTDEC_0430	PWY-2941	L-lysine biosynthesis II
CTDEC_0430	PWY-5097	L-lysine biosynthesis VI
CTDEC_0432	PWY-1622	formaldehyde assimilation I (serine pathway)
CTDEC_0432	PWY-181	photorespiration
CTDEC_0432	PWY-2161	folate polyglutamylation
CTDEC_0432	PWY-2201	folate transformations I
CTDEC_0432	PWY-3661	glycine betaine degradation I
CTDEC_0432	PWY-3661-1	glycine betaine degradation II (mammalian)
CTDEC_0432	PWY-3841	folate transformations II
CTDEC_0432	PWY-5497	purine nucleobases degradation II (anaerobic)
CTDEC_0433	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTDEC_0433	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTDEC_0434	PWY-7560	methylerythritol phosphate pathway II
CTDEC_0445	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTDEC_0452	PWY-7205	CMP phosphorylation
CTDEC_0455	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTDEC_0455	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTDEC_0462	PWY-7560	methylerythritol phosphate pathway II
CTDEC_0489	PWY-622	starch biosynthesis
CTDEC_0491	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0496	PWY-5269	cardiolipin biosynthesis II
CTDEC_0496	PWY-5668	cardiolipin biosynthesis I
CTDEC_0499	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTDEC_0499	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CTDEC_0500	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTDEC_0500	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CTDEC_0500	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTDEC_0500	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0500	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CTDEC_0500	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTDEC_0500	PWY-7205	CMP phosphorylation
CTDEC_0500	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTDEC_0500	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0500	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0500	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0500	PWY-7224	purine deoxyribonucleosides salvage
CTDEC_0500	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTDEC_0500	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTDEC_0505	PWY-1042	glycolysis IV (plant cytosol)
CTDEC_0505	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTDEC_0505	PWY-6901	superpathway of glucose and xylose degradation
CTDEC_0505	PWY-7003	glycerol degradation to butanol
CTDEC_0532	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTDEC_0532	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTDEC_0532	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTDEC_0532	PWY-5994	palmitate biosynthesis I (animals and fungi)
CTDEC_0532	PWY-6113	superpathway of mycolate biosynthesis
CTDEC_0532	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTDEC_0532	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTDEC_0532	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTDEC_0532	PWYG-321	mycolate biosynthesis
CTDEC_0557	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CTDEC_0557	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTDEC_0558	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTDEC_0558	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CTDEC_0558	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTDEC_0587	PWY-1042	glycolysis IV (plant cytosol)
CTDEC_0587	PWY-1622	formaldehyde assimilation I (serine pathway)
CTDEC_0587	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTDEC_0587	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTDEC_0587	PWY-5723	Rubisco shunt
CTDEC_0587	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTDEC_0587	PWY-6886	1-butanol autotrophic biosynthesis
CTDEC_0587	PWY-6901	superpathway of glucose and xylose degradation
CTDEC_0587	PWY-7003	glycerol degradation to butanol
CTDEC_0587	PWY-7124	ethylene biosynthesis V (engineered)
CTDEC_0587	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTDEC_0591	PWY-3781	aerobic respiration I (cytochrome c)
CTDEC_0591	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CTDEC_0591	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTDEC_0591	PWY-5690	TCA cycle II (plants and fungi)
CTDEC_0591	PWY-6728	methylaspartate cycle
CTDEC_0591	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTDEC_0591	PWY-7254	TCA cycle VII (acetate-producers)
CTDEC_0591	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTDEC_0592	PWY-3781	aerobic respiration I (cytochrome c)
CTDEC_0592	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CTDEC_0592	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTDEC_0592	PWY-5690	TCA cycle II (plants and fungi)
CTDEC_0592	PWY-6728	methylaspartate cycle
CTDEC_0592	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTDEC_0592	PWY-7254	TCA cycle VII (acetate-producers)
CTDEC_0592	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTDEC_0606	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CTDEC_0611	PWY-5199	factor 420 polyglutamylation
CTDEC_0612	PWY-3841	folate transformations II
CTDEC_0612	PWY-6614	tetrahydrofolate biosynthesis
CTDEC_0613	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTDEC_0613	PWY-6148	tetrahydromethanopterin biosynthesis
CTDEC_0613	PWY-6614	tetrahydrofolate biosynthesis
CTDEC_0613	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTDEC_0613	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTDEC_0614	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTDEC_0614	PWY-6148	tetrahydromethanopterin biosynthesis
CTDEC_0614	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTDEC_0614	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTDEC_0632	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTDEC_0633	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTDEC_0633	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTDEC_0637	PWY-5913	TCA cycle VI (obligate autotrophs)
CTDEC_0637	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CTDEC_0637	PWY-6638	sulfolactate degradation III
CTDEC_0637	PWY-6642	(<i>R</i>)-cysteate degradation
CTDEC_0637	PWY-6643	coenzyme M biosynthesis II
CTDEC_0637	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTDEC_0637	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTDEC_0637	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTDEC_0655	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTDEC_0655	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CTDEC_0662	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTDEC_0669	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0687	PWY-6823	molybdenum cofactor biosynthesis
CTDEC_0687	PWY-6891	thiazole biosynthesis II (Bacillus)
CTDEC_0687	PWY-6892	thiazole biosynthesis I (E. coli)
CTDEC_0687	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CTDEC_0693	PWY-1042	glycolysis IV (plant cytosol)
CTDEC_0693	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTDEC_0693	PWY-6886	1-butanol autotrophic biosynthesis
CTDEC_0693	PWY-6901	superpathway of glucose and xylose degradation
CTDEC_0693	PWY-7003	glycerol degradation to butanol
CTDEC_0699	PWY-5669	phosphatidylethanolamine biosynthesis I
CTDEC_0710	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTDEC_0714	PWY-5667	CDP-diacylglycerol biosynthesis I
CTDEC_0714	PWY-5981	CDP-diacylglycerol biosynthesis III
CTDEC_0717	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTDEC_0722	PWY-1622	formaldehyde assimilation I (serine pathway)
CTDEC_0722	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTDEC_0725	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTDEC_0725	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CTDEC_0729	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CTDEC_0731	PWY-6167	flavin biosynthesis II (archaea)
CTDEC_0731	PWY-6168	flavin biosynthesis III (fungi)
CTDEC_0731	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTDEC_0732	PWY-6167	flavin biosynthesis II (archaea)
CTDEC_0732	PWY-6168	flavin biosynthesis III (fungi)
CTDEC_0747	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CTDEC_0747	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CTDEC_0750	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTDEC_0750	PWY-5723	Rubisco shunt
CTDEC_0750	PWY-6891	thiazole biosynthesis II (Bacillus)
CTDEC_0750	PWY-6892	thiazole biosynthesis I (E. coli)
CTDEC_0750	PWY-6901	superpathway of glucose and xylose degradation
CTDEC_0750	PWY-7560	methylerythritol phosphate pathway II
CTDEC_0756	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTDEC_0756	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTDEC_0757	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTDEC_0757	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTDEC_0757	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTDEC_0758	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTDEC_0758	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTDEC_0761	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTDEC_0761	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTDEC_0761	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTDEC_0761	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTDEC_0762	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTDEC_0762	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTDEC_0766	PWY-2781	<i>cis</i>-zeatin biosynthesis
CTDEC_0767	PWY-5198	factor 420 biosynthesis
CTDEC_0797	PWY-5269	cardiolipin biosynthesis II
CTDEC_0797	PWY-5668	cardiolipin biosynthesis I
CTDEC_0798	PWY-622	starch biosynthesis
CTDEC_0804	PWY-7560	methylerythritol phosphate pathway II
CTDEC_0807	PWY-5667	CDP-diacylglycerol biosynthesis I
CTDEC_0807	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CTDEC_0815	PWY-6749	CMP-legionaminate biosynthesis I
CTDEC_0816	PWY-6749	CMP-legionaminate biosynthesis I
CTDEC_0821	PWY-5392	reductive TCA cycle II
CTDEC_0821	PWY-5537	pyruvate fermentation to acetate V
CTDEC_0821	PWY-5538	pyruvate fermentation to acetate VI
CTDEC_0821	PWY-5690	TCA cycle II (plants and fungi)
CTDEC_0821	PWY-5913	TCA cycle VI (obligate autotrophs)
CTDEC_0821	PWY-6728	methylaspartate cycle
CTDEC_0821	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTDEC_0821	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTDEC_0822	PWY-5392	reductive TCA cycle II
CTDEC_0822	PWY-5537	pyruvate fermentation to acetate V
CTDEC_0822	PWY-5538	pyruvate fermentation to acetate VI
CTDEC_0822	PWY-5690	TCA cycle II (plants and fungi)
CTDEC_0822	PWY-5913	TCA cycle VI (obligate autotrophs)
CTDEC_0822	PWY-6728	methylaspartate cycle
CTDEC_0822	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTDEC_0822	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTDEC_0827	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTDEC_0827	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTDEC_0827	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTDEC_0827	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTDEC_0827	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0827	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0827	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTDEC_0827	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTDEC_0828	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTDEC_0828	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTDEC_0828	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTDEC_0828	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTDEC_0828	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0828	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTDEC_0828	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTDEC_0828	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTDEC_0831	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTDEC_0831	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTDEC_0855	PWY-5392	reductive TCA cycle II
CTDEC_0855	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTDEC_0855	PWY-5690	TCA cycle II (plants and fungi)
CTDEC_0855	PWY-5913	TCA cycle VI (obligate autotrophs)
CTDEC_0855	PWY-6728	methylaspartate cycle
CTDEC_0855	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTDEC_0855	PWY-7254	TCA cycle VII (acetate-producers)
CTDEC_0855	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTDEC_0859	PWY-7560	methylerythritol phosphate pathway II
CTDEC_0866	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CTDEC_0866	PWY-622	starch biosynthesis
