CTRC55_00020	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CTRC55_00150	PWY-6829	tRNA methylation (yeast)
CTRC55_00150	PWY-7285	methylwyosine biosynthesis
CTRC55_00150	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CTRC55_00165	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_00205	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_00245	PWY-5988	wound-induced proteolysis I
CTRC55_00245	PWY-6018	seed germination protein turnover
CTRC55_00295	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTRC55_00300	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTRC55_00310	PWY-7560	methylerythritol phosphate pathway II
CTRC55_00385	PWY-7560	methylerythritol phosphate pathway II
CTRC55_00420	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CTRC55_00420	PWY-2201	folate transformations I
CTRC55_00420	PWY-3841	folate transformations II
CTRC55_00420	PWY-5030	L-histidine degradation III
CTRC55_00420	PWY-5497	purine nucleobases degradation II (anaerobic)
CTRC55_00420	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CTRC55_00460	PWY-5941	glycogen degradation II (eukaryotic)
CTRC55_00460	PWY-6724	starch degradation II
CTRC55_00460	PWY-6737	starch degradation V
CTRC55_00460	PWY-7238	sucrose biosynthesis II
CTRC55_00490	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CTRC55_00490	PWY-6167	flavin biosynthesis II (archaea)
CTRC55_00490	PWY-6168	flavin biosynthesis III (fungi)
CTRC55_00525	PWY-6012	acyl carrier protein metabolism I
CTRC55_00525	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CTRC55_00565	PWY-5663	tetrahydrobiopterin biosynthesis I
CTRC55_00565	PWY-5664	tetrahydrobiopterin biosynthesis II
CTRC55_00565	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTRC55_00565	PWY-6703	preQ<sub>0</sub> biosynthesis
CTRC55_00565	PWY-6983	tetrahydrobiopterin biosynthesis III
CTRC55_00565	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CTRC55_00635	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTRC55_00635	PWY-5723	Rubisco shunt
CTRC55_00675	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_00725	PWY-7533	gliotoxin biosynthesis
CTRC55_00945	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTRC55_00945	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CTRC55_00950	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CTRC55_00950	PWY-7177	UTP and CTP dephosphorylation II
CTRC55_00950	PWY-7185	UTP and CTP dephosphorylation I
CTRC55_00960	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CTRC55_00965	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CTRC55_00965	PWY-6855	chitin degradation I (archaea)
CTRC55_00965	PWY-6906	chitin derivatives degradation
CTRC55_00975	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTRC55_00975	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTRC55_00975	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_00975	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CTRC55_00975	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTRC55_00975	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTRC55_01000	PWY-6700	queuosine biosynthesis
CTRC55_01060	PWY-1042	glycolysis IV (plant cytosol)
CTRC55_01060	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTRC55_01060	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTRC55_01060	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTRC55_01070	PWY-1042	glycolysis IV (plant cytosol)
CTRC55_01070	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTRC55_01070	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTRC55_01070	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTRC55_01085	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTRC55_01100	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTRC55_01100	PWY-5723	Rubisco shunt
CTRC55_01125	PWY-5381	pyridine nucleotide cycling (plants)
CTRC55_01125	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CTRC55_01125	PWY-6596	adenosine nucleotides degradation I
CTRC55_01125	PWY-6606	guanosine nucleotides degradation II
CTRC55_01125	PWY-6607	guanosine nucleotides degradation I
CTRC55_01125	PWY-6608	guanosine nucleotides degradation III
CTRC55_01125	PWY-7185	UTP and CTP dephosphorylation I
CTRC55_01225	PWY-5367	petroselinate biosynthesis
CTRC55_01225	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTRC55_01225	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTRC55_01225	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTRC55_01225	PWY-5994	palmitate biosynthesis I (animals and fungi)
CTRC55_01225	PWY-6113	superpathway of mycolate biosynthesis
CTRC55_01225	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTRC55_01225	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTRC55_01225	PWY-6951	CTRC55_01225|fabG|YP_008349894.1|GeneID:16421564
CTRC55_01225	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CTRC55_01225	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTRC55_01225	PWYG-321	mycolate biosynthesis
CTRC55_01230	PWY-4381	fatty acid biosynthesis initiation I
CTRC55_01230	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CTRC55_01230	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTRC55_01235	PWY-4381	fatty acid biosynthesis initiation I
CTRC55_01280	PWY-5941	glycogen degradation II (eukaryotic)
CTRC55_01280	PWY-622	starch biosynthesis
CTRC55_01280	PWY-6731	starch degradation III
CTRC55_01280	PWY-6737	starch degradation V
CTRC55_01280	PWY-7238	sucrose biosynthesis II
CTRC55_01330	PWY-6823	molybdenum cofactor biosynthesis
CTRC55_01330	PWY-6891	thiazole biosynthesis II (Bacillus)
CTRC55_01330	PWY-6892	thiazole biosynthesis I (E. coli)
CTRC55_01330	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CTRC55_01370	PWY-4381	fatty acid biosynthesis initiation I
CTRC55_01370	PWY-5743	3-hydroxypropanoate cycle
CTRC55_01370	PWY-5744	glyoxylate assimilation
CTRC55_01370	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTRC55_01370	PWY-6679	jadomycin biosynthesis
CTRC55_01370	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTRC55_01470	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTRC55_01470	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CTRC55_01510	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTRC55_01510	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTRC55_01510	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_01510	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CTRC55_01515	PWY-4381	fatty acid biosynthesis initiation I
CTRC55_01515	PWY-5743	3-hydroxypropanoate cycle
CTRC55_01515	PWY-5744	glyoxylate assimilation
CTRC55_01515	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CTRC55_01515	PWY-6679	jadomycin biosynthesis
CTRC55_01515	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTRC55_01520	PWY-6854	ethylene biosynthesis III (microbes)
CTRC55_01525	PWY-6749	CMP-legionaminate biosynthesis I
CTRC55_01545	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTRC55_01545	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTRC55_01585	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_01590	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_01615	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTRC55_01615	PWY-5723	Rubisco shunt
CTRC55_01700	PWY-1042	glycolysis IV (plant cytosol)
CTRC55_01700	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTRC55_01700	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTRC55_01700	PWY-7003	glycerol degradation to butanol
CTRC55_01720	PWY-6891	thiazole biosynthesis II (Bacillus)
CTRC55_01720	PWY-6892	thiazole biosynthesis I (E. coli)
CTRC55_01720	PWY-7560	methylerythritol phosphate pathway II
CTRC55_01725	PWY-1042	glycolysis IV (plant cytosol)
CTRC55_01725	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTRC55_01725	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTRC55_01725	PWY-5723	Rubisco shunt
CTRC55_01725	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTRC55_01725	PWY-6886	1-butanol autotrophic biosynthesis
CTRC55_01725	PWY-6901	superpathway of glucose and xylose degradation
CTRC55_01725	PWY-7003	glycerol degradation to butanol
CTRC55_01725	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTRC55_01725	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTRC55_01890	PWY-2941	L-lysine biosynthesis II
CTRC55_01890	PWY-2942	L-lysine biosynthesis III
CTRC55_01890	PWY-5097	L-lysine biosynthesis VI
CTRC55_01895	PWY-2941	L-lysine biosynthesis II
CTRC55_01895	PWY-2942	L-lysine biosynthesis III
CTRC55_01895	PWY-5097	L-lysine biosynthesis VI
CTRC55_01895	PWY-6559	spermidine biosynthesis II
CTRC55_01895	PWY-6562	norspermidine biosynthesis
CTRC55_01895	PWY-7153	grixazone biosynthesis
CTRC55_01900	PWY-2941	L-lysine biosynthesis II
CTRC55_01900	PWY-2942	L-lysine biosynthesis III
CTRC55_01900	PWY-5097	L-lysine biosynthesis VI
CTRC55_01900	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CTRC55_01900	PWY-6559	spermidine biosynthesis II
CTRC55_01900	PWY-6562	norspermidine biosynthesis
CTRC55_01900	PWY-7153	grixazone biosynthesis
CTRC55_01900	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CTRC55_01905	PWY-2941	L-lysine biosynthesis II
CTRC55_01905	PWY-2942	L-lysine biosynthesis III
CTRC55_01905	PWY-5097	L-lysine biosynthesis VI
CTRC55_01915	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTRC55_01920	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTRC55_01925	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTRC55_01930	PWY-6164	3-dehydroquinate biosynthesis I
CTRC55_01935	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CTRC55_01935	PWY-6416	quinate degradation II
CTRC55_01935	PWY-6707	gallate biosynthesis
CTRC55_01950	PWY-40	putrescine biosynthesis I
CTRC55_01950	PWY-43	putrescine biosynthesis II
CTRC55_01950	PWY-6305	putrescine biosynthesis IV
CTRC55_01950	PWY-6834	spermidine biosynthesis III
CTRC55_01965	PWY-1622	formaldehyde assimilation I (serine pathway)
CTRC55_01965	PWY-5392	reductive TCA cycle II
CTRC55_01965	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTRC55_01965	PWY-5690	TCA cycle II (plants and fungi)
CTRC55_01965	PWY-5913	TCA cycle VI (obligate autotrophs)
CTRC55_01965	PWY-6728	methylaspartate cycle
CTRC55_01965	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTRC55_01965	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTRC55_01965	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTRC55_01975	PWY-3801	sucrose degradation II (sucrose synthase)
CTRC55_01975	PWY-5054	sorbitol biosynthesis I
CTRC55_01975	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CTRC55_01975	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CTRC55_01975	PWY-5659	GDP-mannose biosynthesis
CTRC55_01975	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTRC55_01975	PWY-621	sucrose degradation III (sucrose invertase)
CTRC55_01975	PWY-622	starch biosynthesis
CTRC55_01975	PWY-6531	mannitol cycle
CTRC55_01975	PWY-6981	chitin biosynthesis
CTRC55_01975	PWY-7238	sucrose biosynthesis II
CTRC55_01975	PWY-7347	sucrose biosynthesis III
CTRC55_01975	PWY-7385	1,3-propanediol biosynthesis (engineered)
CTRC55_01995	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTRC55_01995	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CTRC55_01995	PWY-6164	3-dehydroquinate biosynthesis I
CTRC55_02040	PWY-5097	L-lysine biosynthesis VI
CTRC55_02115	PWY-6167	flavin biosynthesis II (archaea)
CTRC55_02115	PWY-6168	flavin biosynthesis III (fungi)
CTRC55_02115	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_02230	PWY-5198	factor 420 biosynthesis
CTRC55_02240	PWY-5839	menaquinol-7 biosynthesis
CTRC55_02240	PWY-5844	menaquinol-9 biosynthesis
CTRC55_02240	PWY-5849	menaquinol-6 biosynthesis
CTRC55_02240	PWY-5890	menaquinol-10 biosynthesis
CTRC55_02240	PWY-5891	menaquinol-11 biosynthesis
CTRC55_02240	PWY-5892	menaquinol-12 biosynthesis
CTRC55_02240	PWY-5895	menaquinol-13 biosynthesis
CTRC55_02250	PWY-2941	L-lysine biosynthesis II
CTRC55_02250	PWY-5097	L-lysine biosynthesis VI
CTRC55_02260	PWY-1622	formaldehyde assimilation I (serine pathway)
CTRC55_02260	PWY-181	photorespiration
CTRC55_02260	PWY-2161	folate polyglutamylation
CTRC55_02260	PWY-2201	folate transformations I
CTRC55_02260	PWY-3661	glycine betaine degradation I
CTRC55_02260	PWY-3661-1	glycine betaine degradation II (mammalian)
CTRC55_02260	PWY-3841	folate transformations II
CTRC55_02260	PWY-5497	purine nucleobases degradation II (anaerobic)
CTRC55_02270	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTRC55_02270	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTRC55_02275	PWY-7560	methylerythritol phosphate pathway II
CTRC55_02335	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTRC55_02380	PWY-7205	CMP phosphorylation
CTRC55_02395	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTRC55_02395	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTRC55_02430	PWY-7560	methylerythritol phosphate pathway II
CTRC55_02585	PWY-622	starch biosynthesis
CTRC55_02595	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_02620	PWY-5269	cardiolipin biosynthesis II
CTRC55_02620	PWY-5668	cardiolipin biosynthesis I
CTRC55_02640	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTRC55_02640	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CTRC55_02645	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTRC55_02645	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CTRC55_02645	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTRC55_02645	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_02645	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CTRC55_02645	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTRC55_02645	PWY-7205	CMP phosphorylation
CTRC55_02645	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTRC55_02645	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_02645	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_02645	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_02645	PWY-7224	purine deoxyribonucleosides salvage
CTRC55_02645	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTRC55_02645	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTRC55_02670	PWY-1042	glycolysis IV (plant cytosol)
CTRC55_02670	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTRC55_02670	PWY-6901	superpathway of glucose and xylose degradation
CTRC55_02670	PWY-7003	glycerol degradation to butanol
CTRC55_02805	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CTRC55_02805	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CTRC55_02805	PWY-5989	stearate biosynthesis II (bacteria and plants)
CTRC55_02805	PWY-5994	palmitate biosynthesis I (animals and fungi)
CTRC55_02805	PWY-6113	superpathway of mycolate biosynthesis
CTRC55_02805	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CTRC55_02805	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CTRC55_02805	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CTRC55_02805	PWYG-321	mycolate biosynthesis
CTRC55_02930	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CTRC55_02930	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CTRC55_02935	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTRC55_02935	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CTRC55_02935	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CTRC55_03085	PWY-1042	glycolysis IV (plant cytosol)
CTRC55_03085	PWY-1622	formaldehyde assimilation I (serine pathway)
CTRC55_03085	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CTRC55_03085	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTRC55_03085	PWY-5723	Rubisco shunt
CTRC55_03085	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CTRC55_03085	PWY-6886	1-butanol autotrophic biosynthesis
CTRC55_03085	PWY-6901	superpathway of glucose and xylose degradation
CTRC55_03085	PWY-7003	glycerol degradation to butanol
CTRC55_03085	PWY-7124	ethylene biosynthesis V (engineered)
CTRC55_03085	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CTRC55_03105	PWY-3781	aerobic respiration I (cytochrome c)
CTRC55_03105	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CTRC55_03105	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTRC55_03105	PWY-5690	TCA cycle II (plants and fungi)
CTRC55_03105	PWY-6728	methylaspartate cycle
CTRC55_03105	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTRC55_03105	PWY-7254	TCA cycle VII (acetate-producers)
CTRC55_03105	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTRC55_03110	PWY-3781	aerobic respiration I (cytochrome c)
CTRC55_03110	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CTRC55_03110	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CTRC55_03110	PWY-5690	TCA cycle II (plants and fungi)
CTRC55_03110	PWY-6728	methylaspartate cycle
CTRC55_03110	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTRC55_03110	PWY-7254	TCA cycle VII (acetate-producers)
CTRC55_03110	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CTRC55_03190	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CTRC55_03220	PWY-5199	factor 420 polyglutamylation
CTRC55_03225	PWY-3841	folate transformations II
CTRC55_03225	PWY-6614	tetrahydrofolate biosynthesis
CTRC55_03230	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTRC55_03230	PWY-6148	tetrahydromethanopterin biosynthesis
CTRC55_03230	PWY-6614	tetrahydrofolate biosynthesis
CTRC55_03230	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTRC55_03230	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTRC55_03235	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CTRC55_03235	PWY-6148	tetrahydromethanopterin biosynthesis
CTRC55_03235	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CTRC55_03235	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTRC55_03320	PWY-3221	dTDP-L-rhamnose biosynthesis II
CTRC55_03320	PWY-6808	dTDP-D-forosamine biosynthesis
CTRC55_03320	PWY-6942	dTDP-D-desosamine biosynthesis
CTRC55_03320	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CTRC55_03320	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CTRC55_03320	PWY-6974	dTDP-L-olivose biosynthesis
CTRC55_03320	PWY-6976	dTDP-L-mycarose biosynthesis
CTRC55_03320	PWY-7104	dTDP-L-megosamine biosynthesis
CTRC55_03320	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CTRC55_03320	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CTRC55_03320	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CTRC55_03320	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CTRC55_03320	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CTRC55_03320	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CTRC55_03320	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CTRC55_03320	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CTRC55_03335	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTRC55_03340	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTRC55_03340	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CTRC55_03360	PWY-5913	TCA cycle VI (obligate autotrophs)
CTRC55_03360	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CTRC55_03360	PWY-6638	sulfolactate degradation III
CTRC55_03360	PWY-6642	(<i>R</i>)-cysteate degradation
CTRC55_03360	PWY-6643	coenzyme M biosynthesis II
CTRC55_03360	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CTRC55_03360	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CTRC55_03360	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTRC55_03465	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CTRC55_03465	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CTRC55_03505	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CTRC55_03545	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_03640	PWY-6823	molybdenum cofactor biosynthesis
CTRC55_03640	PWY-6891	thiazole biosynthesis II (Bacillus)
CTRC55_03640	PWY-6892	thiazole biosynthesis I (E. coli)
CTRC55_03640	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CTRC55_03670	PWY-1042	glycolysis IV (plant cytosol)
CTRC55_03670	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTRC55_03670	PWY-6886	1-butanol autotrophic biosynthesis
CTRC55_03670	PWY-6901	superpathway of glucose and xylose degradation
CTRC55_03670	PWY-7003	glycerol degradation to butanol
CTRC55_03700	PWY-5669	phosphatidylethanolamine biosynthesis I
CTRC55_03760	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CTRC55_03780	PWY-5667	CDP-diacylglycerol biosynthesis I
CTRC55_03780	PWY-5981	CDP-diacylglycerol biosynthesis III
CTRC55_03795	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CTRC55_03825	PWY-1622	formaldehyde assimilation I (serine pathway)
CTRC55_03825	PWY-5484	glycolysis II (from fructose 6-phosphate)
CTRC55_03845	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CTRC55_03845	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CTRC55_03865	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CTRC55_03875	PWY-6167	flavin biosynthesis II (archaea)
CTRC55_03875	PWY-6168	flavin biosynthesis III (fungi)
CTRC55_03875	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CTRC55_03880	PWY-6167	flavin biosynthesis II (archaea)
CTRC55_03880	PWY-6168	flavin biosynthesis III (fungi)
CTRC55_03960	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CTRC55_03960	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CTRC55_03980	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CTRC55_03980	PWY-5723	Rubisco shunt
CTRC55_03980	PWY-6891	thiazole biosynthesis II (Bacillus)
CTRC55_03980	PWY-6892	thiazole biosynthesis I (E. coli)
CTRC55_03980	PWY-6901	superpathway of glucose and xylose degradation
CTRC55_03980	PWY-7560	methylerythritol phosphate pathway II
CTRC55_04015	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTRC55_04015	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTRC55_04020	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTRC55_04020	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTRC55_04020	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTRC55_04025	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTRC55_04025	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTRC55_04040	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CTRC55_04040	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CTRC55_04040	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CTRC55_04040	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CTRC55_04045	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTRC55_04045	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTRC55_04065	PWY-2781	<i>cis</i>-zeatin biosynthesis
CTRC55_04070	PWY-5198	factor 420 biosynthesis
CTRC55_04235	PWY-5269	cardiolipin biosynthesis II
CTRC55_04235	PWY-5668	cardiolipin biosynthesis I
CTRC55_04240	PWY-622	starch biosynthesis
CTRC55_04270	PWY-7560	methylerythritol phosphate pathway II
CTRC55_04290	PWY-5667	CDP-diacylglycerol biosynthesis I
CTRC55_04290	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CTRC55_04350	PWY-6749	CMP-legionaminate biosynthesis I
CTRC55_04355	PWY-6749	CMP-legionaminate biosynthesis I
CTRC55_04385	PWY-5392	reductive TCA cycle II
CTRC55_04385	PWY-5537	pyruvate fermentation to acetate V
CTRC55_04385	PWY-5538	pyruvate fermentation to acetate VI
CTRC55_04385	PWY-5690	TCA cycle II (plants and fungi)
CTRC55_04385	PWY-5913	TCA cycle VI (obligate autotrophs)
CTRC55_04385	PWY-6728	methylaspartate cycle
CTRC55_04385	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTRC55_04385	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTRC55_04390	PWY-5392	reductive TCA cycle II
CTRC55_04390	PWY-5537	pyruvate fermentation to acetate V
CTRC55_04390	PWY-5538	pyruvate fermentation to acetate VI
CTRC55_04390	PWY-5690	TCA cycle II (plants and fungi)
CTRC55_04390	PWY-5913	TCA cycle VI (obligate autotrophs)
CTRC55_04390	PWY-6728	methylaspartate cycle
CTRC55_04390	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CTRC55_04390	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CTRC55_04415	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTRC55_04415	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTRC55_04415	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTRC55_04415	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTRC55_04415	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_04415	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_04415	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTRC55_04415	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTRC55_04420	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CTRC55_04420	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTRC55_04420	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CTRC55_04420	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CTRC55_04420	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_04420	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CTRC55_04420	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CTRC55_04420	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CTRC55_04435	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CTRC55_04435	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CTRC55_04600	PWY-7560	methylerythritol phosphate pathway II
CTRC55_04650	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CTRC55_04650	PWY-622	starch biosynthesis
