        gatC NONE
        gatA NONE
        gatB    5084 ..    5119 + -14.2  -4.58685   AAAGGCATAAAAGAG    AAGAACCCTCTTCATA AAAC TATGGAGAGGGTTCTC     TTTTTAAAAGGCTTT 100 58
CTRC46_00040 NONE
CTRC46_00045    8184 ..    8195 +  -4.4  -3.86346   GTTCTTTGGAGCTTC                TGCA AATT TGCA                 TTTCTAACAAGGTAA  57 7
CTRC46_00055    9985 ..   10000 +  -4.6  -3.78934   CCGGGAAAAAGTTTG              GAGCAG CTAA CAGCTC               TTCTTCTGAAGAGAA  59 203
CTRC46_00075 NONE
CTRC46_00080   16038 ..   16069 + -14.6  -3.28712   TACTAATTGCAGTAG      GGTACAAGGCTCTT GAAA AGGAGCCTTGTATC       TTGTGCAAACAAAAG 100 35
CTRC46_00090   18414 ..   18425 +  -2.2  -5.00138   GTAAAAGATCGAACA                GTCG CGGT TGAC                 TTTTTCCTTTAAGTC  66 72
CTRC46_00095   19862 ..   19901 + -10.2  -6.04324   GGGCATAAGCAAGTT  CAATAGGAGTCTTGTTAC TTAG GTAACAAGACTCTTCTTC   TTTTTTCTTTTTTGC 100 33
        ileS   24570 ..   24590 +  -6.2  -5.94597   CATTGAGCAAAAAAA            GAGGTCTT ATTAA AAGATCTC            TTTTTTTTGCTCTTA 100 50
       rpmE2   27853 ..   27870 +  -9.8  -6.11229   GTTATCTAGAGAAAA             GCGGGG CGAACA CCCCGC              TTTTTTTGTTTTAAT 100 58
        prfA NONE
CTRC46_00130 NONE
CTRC46_00135 NONE
        rpsP NONE
        trmD NONE
        rplS   33102 ..   33123 +    -3  -2.80252   AAATAGTAAAGAAAA           GAGAGCGGC ATTAA GCC-CTTTC           TGCTGTTCTCAACGT  42 35
        rnhB NONE
         gmk NONE
CTRC46_00165 NONE
CTRC46_00170   36394 ..   36419 +  -8.3  -5.93809   CTTCACGGAGAGAAA         GAGGGGTTTCA TTTA TAGAACCCCTC          TTTTTTTTGTGCAAA 100 55
CTRC46_00185   41551 ..   41568 +  -2.7  -3.95324   TGCATAGTGACTAAA             GAGTTTT TTAA AGAGCTC              TTCTTGTTGCAGCTG  54 449
CTRC46_00205   44010 ..   44026 +  -2.3  -4.46775   TACTATTGCGAATAC              TTATATG ACT CATAAAA              TTTCTGTTTTACATC  59 63
        ruvB NONE
CTRC46_00215   45864 ..   45887 +   -11  -5.72616   GCTTGGTAGCAAAAA          GACCCATCTC TAAT GAGCTGGGTC           TTTTTTTATCTAGAT 100 57
CTRC46_00230 NONE
CTRC46_00235   49554 ..   49568 +  -3.6  -2.72314   ATTCAATCCCATATC               TTAAGA AGC TCTTGA               ATCTTCTTGTCTATA  45 11
CTRC46_00240   51329 ..   51363 + -12.5   -5.4756   ATTAAATAATATGTG     TGGTTAGTTTTTAAT AAAAA GTTAAAAACTAACCA     TTTTTTATTAAAGTT 100 56
CTRC46_00245   52138 ..   52164 + -10.3  -5.61913   TGATTTTCTAAGTAG        CCGGGAATAAGA ATTC TCTT-TTCCCGG         TTTTTTGTATTTATT 100 56
CTRC46_00250   53220 ..   53232 +  -4.8  -3.40898   AGATTTTTATTTGAT                GGGA TTTTT TCCC                TGTATATTTTTTCGT  56 39
CTRC46_00255   54059 ..   54081 +  -3.6  -4.00348   TGTTAATTTAATTTT           TTCTAATT AAAAGAA AATTAGAA           TTTAATTAATTAAAA  57 70
CTRC46_00260   55585 ..   55611 + -12.4   -4.4767   GTTATTAACTATTTG         AGTTAAGGGAGA GAA TCTCCCTTAACA         TTTTATACTGAATCG 100 33
CTRC46_00265   56433 ..   56447 +  -9.2  -3.98913   TTGGGAGATCAGTGC               CCTCGG CAG CCGGGG               TTATTTCGGTATCAG  81 120
CTRC46_00270   58309 ..   58320 +  -2.2  -4.88495   TCGTCATAAGATAAA                GGAG GAGA TTCC                 TTTTCTTCTGTATCT  66 185
        sucA NONE
CTRC46_00295   65024 ..   65042 +  -4.6  -3.60792   TTCTTGCTACTGCTC             GGAAATCG AGG TGATTTTC             TTTAGGCATTAAAGG  57 248
CTRC46_00320   71028 ..   71038 +  -2.6  -4.08317   AGGGTAGATATTGTT                 TAAA AAT TTTA                 TTTGATTTAGCCTTA  55 78
CTRC46_00325   71855 ..   71870 +  -2.6  -4.02302   TTTAGTAACTGTCTC              CAGAAGA TCC TCT-CTG              TATTTTTCCTATCAA  53 36
CTRC46_00330 NONE
CTRC46_00335   74702 ..   74722 + -11.9  -5.24129   AGCATAAAACAAGAA            GGCCCAGTA AAC TACTGGGTC            TTTTTTATGAAGCAA 100 34
CTRC46_00350   78908 ..   78924 +  -7.9  -3.58343   CTGCGCTTTTTAGAA              CCTCGAG GAG CTCGTGG              TTTAGGGCTAATGGA  70 295
CTRC46_00360 NONE
CTRC46_00365 NONE
CTRC46_00370 NONE
CTRC46_00375 NONE
CTRC46_00380   85154 ..   85169 +  -2.5  -3.49102   CTTATAGTATCTTAG              GCTTC CTGATA GAGGC               TTGTATAGCAGCTGT  47 137
CTRC46_00385   87274 ..   87297 +  -3.2  -4.73613   TTCCGTTTCTTAGGA          ACTCCCTCATT AAG AAT-AGGGAGG          TTTTGTTCGTAATGA  67 202
        smpB   91408 ..   91429 +  -6.5  -4.63479   ACAGCCCAAGATCTT           CCGGAAGGA TGTT TCCCTCTGG            TTTTGATTTCTCCTC  77 322
CTRC46_00425   94230 ..   94250 + -12.6  -5.93809   TTTTTTGGTTTTTTT            CGCAAGGC CCAGA GCCTTGCG            TTTTTTTTGTCCAAA 100 252
CTRC46_00430 NONE
CTRC46_00435   96542 ..   96552 +  -5.4  -5.81412   ATCTTGCAATCCAAT                 CAAG CAG CTTG                 TTTTTTTTCGCTAGG  95 40
CTRC46_00480  108152 ..  108163 +  -5.8  -2.85874   AAAATCAAGGATATG                TGCC TCTA GGCA                 TAGTTGGTGTCTTTG  54 190
CTRC46_00515 NONE
        acpS  117937 ..  117985 + -12.8  -3.16564   AAAAAGAGGGAGTAT GCCAAAGCTTATTGATT-AGAAC AAGG GCTCTTGATTAATAAGCTTTGGC TTCGTAGGATGAGGG  91 520
CTRC46_00530  118518 ..  118536 +  -2.5  -2.64274   CCTAGAGGTTATTGG             TAAAGAG AGAGC TTCTTTA             TGAGTTTACAGAAGT  41 42
CTRC46_00535  119726 ..  119739 +  -8.1  -2.63723   GTATCACTTTCTAAA               GCAGC TTTT GCTGC                GTTCATTCCTCCGCC  60 319
CTRC46_00560  124766 ..  124780 +  -2.8  -5.71712   TAGTCTTTTTTCGAC               TCTTTG CAG CAGAGG               TTTTTTTATATGAAC  85 55
CTRC46_00565  125836 ..  125849 +  -3.1  -3.19331   ACGGCACAGGTGTAG               TAGGG ATTT CCTTA                TAGTTGTTTTTGATG  46 316
CTRC46_00595 NONE
CTRC46_00600  134889 ..  134922 +  -9.8   -3.6796   TATTTTAACAATTTA     GATTCTTCAAAGCTC AGCGA GGGCTT-GAAGAATC     TTGTTCAGGTGTATT  80 67
CTRC46_00605  135543 ..  135557 +  -3.5  -3.68674   GGTTTTAAAGATTAG               GCTTC ATTGA GAGGC               TGTTTTAAGAGTTTT  51 51
CTRC46_00610 NONE
CTRC46_00615  136316 ..  136336 +  -7.6  -2.94298   GGCAAAACTCGAAAA            GCAGACTT CCTCT AGGTCTGC            TAGCTTTTTTAATGA  64 40
CTRC46_00620  136920 ..  136937 + -11.3  -6.55664   TTCGCGTAGGAAAAA             GAGGAGG GAGA CCTCCTC              TTTTTTTTTATTTTG 100 54
CTRC46_00635 NONE
CTRC46_00640 NONE
CTRC46_00645 NONE
CTRC46_00650  141391 ..  141414 +  -2.4  -6.19302   GGTAGCACCTTTTTA          AATTTAGCTG ATGG CAGCTAACTA           TTTTTTTTATTATGT 100 5
        rplM NONE
        rpsI  142534 ..  142567 + -14.1  -4.56597   TATTGGAGTGCGTTT     CAGAAAAGCCTTCTT TCAA AAGAAGGCTTTTCTA      TTTTTAGGAACGCCA 100 58
CTRC46_00680 NONE
CTRC46_00685  145890 ..  145902 +  -6.3  -4.18018   GAGTTTAAAGGACCC                GCTAT TGT ATAGC                TTTTAAGTAGAGCGA  69 134
CTRC46_00705 NONE
CTRC46_00710  153418 ..  153451 +  -4.7  -2.92003   GATTTGTGGTATAGT     GCTCCCT-AAAGCT TTAGATC AGCTTTTAGGGAGA     TATATGAGCTATTCT  51 78
CTRC46_00715 NONE
CTRC46_00720 NONE
CTRC46_00725  156159 ..  156169 +  -3.2  -4.57569   GAGACAGAGAAATCT                 TGAG TGG CTCG                 TTTTTGAACAAATAC  63 221
CTRC46_00735  158228 ..  158249 +  -6.7  -3.67622   TTGTAAAAACTGGGG           TTGCAAAGA AGGT TCTTTGTAA            TTAATTTTACGAATG  65 151
CTRC46_00740  159008 ..  159025 +  -9.1  -5.70829   TCGGTTGTTTGCGAA             GCTTGGG TTCT CCCAGGC              TTTTTTTATGCTCTT 100 301
CTRC46_00750 NONE
CTRC46_00755 NONE
CTRC46_00760  161721 ..  161746 +  -9.8  -3.88001   TCTTTTCTATTTACA         CCGCTTAGCT TGCTTT AGTTAAGCGG          TTCCTTTTTATCAAA  83 47
CTRC46_00765 NONE
        ligA NONE
CTRC46_00775  170616 ..  170667 + -11.6  -2.71681   ATCACTAGCTTCATA TTTCGATGC-GCGGTGGGAGGGATA GTA TAGCTCTCCTTCCGCAGCATCGAGC TGCTTACACCCCTTA  80 463
        rpmG  173476 ..  173514 +  -2.5   -2.9756   CTAAGTAGGCTTTTA  TCTAGCTTCTAAGATTCC CAAG GGTGTCAT-GAAGTTAGA   ATTATTATTAGCCTT  43 33
CTRC46_00795 NONE
CTRC46_00800  175913 ..  175923 +  -5.4  -3.34894   TTGTACGCGTGAGTG                 TACC ATG GGTA                 TCTTTAAGAGGAGTT  55 241
CTRC46_00840  183891 ..  183920 +  -3.6   -3.4678   GTTGAGGAGCGGCTT       CTGGATAGGAAG AAAGGC CTTGTTGTCCAG        TTGTAGTGTAAGGCT  51 72
CTRC46_00865  188088 ..  188100 +  -6.3  -2.81702   TATTGGGCTTTTGCT                GCTAA TGA TTAGC                TCCTTGCTCCTATTG  54 206
CTRC46_00880 NONE
CTRC46_00885  189659 ..  189684 +  -5.5  -5.00884   TTTATTTGATTAAGA         GATGTTCTTAT AGAA GTAAGAGCGTC          TTTTTTGCGCAGGAT  76 58
CTRC46_00890 NONE
CTRC46_00895  191702 ..  191735 + -13.3  -2.78465   ATTTATGAATATGAA     TATGAAGCCCAGGCA TCGA TATCTGGGCTTCATA      GTTGTCTGTATAGAT  93 40
CTRC46_00910  195085 ..  195105 +    -4  -3.07113   AGTAATCACTCTCTC            GATCTCAT CAAAA GTGGGATC            TTCAATAAGATAATC  49 513
CTRC46_00925  197222 ..  197233 +  -2.2  -4.26903   CGGTTTCTATAGTTT                CATC AAAA GGTG                 TTTTCGTAAGCTGGA  58 143
CTRC46_00945 NONE
        pyrG NONE
CTRC46_00955  202640 ..  202654 +   -10  -4.36914   TATACTAGGACCCCT               CATGGC AAA GCCATG               TTTTATGAGAGAGAA  89 33
CTRC46_00960 NONE
CTRC46_00965  205259 ..  205278 +    -5  -2.80472   TAGGAGATCCGGATA            TGCAAGTA ATGA TACTGGCA             CCTTTTTTGCTAAAA  49 217
CTRC46_01015 NONE
CTRC46_01020 NONE
CTRC46_01025  220200 ..  220243 +  -3.2  -4.89567   TTTAAAATGCGGAGA GGTCTTGTCTAGAGAGTGTTA AAT TATCACTCT-TGGCAAAGGCC TTTTATGTTTTCAAC  69 78
CTRC46_01030 NONE
CTRC46_01035 NONE
CTRC46_01040 NONE
CTRC46_01045  223706 ..  223718 +  -2.7  -3.47841   TTTACTTTCTCTTTT                TGATA ATC TATCG                TTATCCTGTAGCTCT  47 23
CTRC46_01050  224771 ..  224786 +  -3.4  -3.28924   CTTTTGAGTCATAGT              TTTTAT CCAG ATAAAA               TTATAGGGAGCCATG  48 27
CTRC46_01055  226221 ..  226234 +  -3.1  -2.79796   ATTCGCTAACGTGTT               TGAGC AAAA GCTTA                TGTCGTCGAATAAAC  44 32
CTRC46_01060 NONE
CTRC46_01065 NONE
CTRC46_01070  230870 ..  230887 +  -9.9  -2.83905   CCAAACATAAGAGGC             GCCTCTT TTTG AAGAGGC              TCTAATAAATTATGC  72 515
CTRC46_01085 NONE
CTRC46_01110 NONE
CTRC46_01115  242103 ..  242131 +    -9  -3.89614   AAATTCTTTTGCACA        GAAAAGGGCTTT GTAAA GAAGCTCTTTTC        TTTCTAAGACTTACC  79 39
CTRC46_01120  242962 ..  242975 +  -2.5  -3.18023   GTCTTTTCCTAGATT               TAAAT AAAA ATTTA                TATTAATCATAATAC  44 40
        surE  243936 ..  243961 +    -7  -5.00616   CTGGCTTAGTTATCT         GTATGTTGAA ACGAAC TTCAACGTAC          TTTTTTCAGCAAGAA  83 32
        ubiA NONE
CTRC46_01135  245510 ..  245536 +  -9.5  -4.50193   CTTATAAAAAGATGG        GAGAACC-CCCG CTAA TGGGAGGTTCTC         TTTTCGTTGATTACT  86 11
CTRC46_01190  253916 ..  253933 +  -4.9  -3.67597   GTCTTAATCACGAGA             TCTTTTC GTTT GAAAGGA              TTGTTGACTGCACAG  57 137
CTRC46_01195  255531 ..  255543 +  -4.9  -3.50853   GGTCTTCTAATTCAT                TAAAG GCT CTTTA                TTGTGATTCACGGAG  56 96
CTRC46_01200 NONE
CTRC46_01205  256526 ..  256551 +  -4.9  -4.20918   TTATATGTAAGCTAA         TTTTTGAATTA GATT TAATTCTAAAA          TTTCTTGAAATTAAC  66 26
CTRC46_01210  259359 ..  259369 +  -5.4  -2.82862   CCCGGGAATACATAA                 CTAG TTC CTAG                 CTTTAAATCCTTAGT  52 15
CTRC46_01215  259849 ..  259875 +  -7.4  -4.35461   ATGGGAACTGTGGGC         CTAAACTCTTTG TTG CAGAGATTTTAG         TTTTGATGCTCTTGG  76 63
        recR  264151 ..  264165 +  -4.2  -3.29511   CTAATATGTGGGGAC               GCCTAT GAG ATTGGC               TTCTGACCAAATAAG  52 293
CTRC46_01245  266645 ..  266667 + -12.1  -3.67517   TTCTAGAATCCGAAA           GGAGAAGGA GAGCA TCCTTCTCC           TTTCACCTATTGGTA  90 35
CTRC46_01250 NONE
        lpxD  268513 ..  268526 +  -3.8  -4.05322   CGTGAAAACGTCTCC               CCCT TTATGT AGGG                TTTCTATAGCCATTT  58 223
CTRC46_01265 NONE
CTRC46_01270 NONE
CTRC46_01275  273027 ..  273045 + -11.8  -4.30987   TACTTCTCAATTAAA             GAAGGGAA TGT TTCCCTTC             TTTCTTCTAAGAAGT  93 27
CTRC46_01285 NONE
CTRC46_01305 NONE
CTRC46_01310  282878 ..  282888 +    -4  -3.57825   CTAAATCCTTATTAA                 GAAA TTT TTTC                 TTGCTGTTTTATACG  53 237
CTRC46_01320 NONE
CTRC46_01325  286365 ..  286382 +  -3.4  -2.98005   CTCCTTGTTGTCCTC             CTCCAG AAATTA TTGGAG              ATATTTTGATTTTTG  44 496
CTRC46_01340 NONE
CTRC46_01345 NONE
CTRC46_01350 NONE
CTRC46_01355  290735 ..  290748 +  -2.4  -4.12043   TGAAAAGCTGGGCAA               GAGT CTAATA ACTC                TTCTTTGGTTCCTTC  55 119
CTRC46_01405 NONE
CTRC46_01410  302409 ..  302425 +  -3.1   -5.4182   GAGATTCTCCTTCTA              TTATTGA GTA TTAATAA              TTTTTGTTTCTGATT  78 81
        dnaA  303967 ..  303979 +  -4.9  -4.17048   CACTTTGTGTAGTCT                TGAAA AGC TTTCA                TTATTTTACAGAGAC  63 29
CTRC46_01420  305074 ..  305085 +  -2.2  -2.74144   AAGATAGACAAATCT                CTCT TCCT GGAG                 CTTTACAAATGCAGC  41 500
CTRC46_01430 NONE
CTRC46_01435 NONE
CTRC46_01440 NONE
CTRC46_01445  309071 ..  309087 + -10.1  -3.77206   CAAGGCTTCATAAAT              GGCGGTT AAT AGCCGCC              TTTGCTAGGGTTCTA  81 28
CTRC46_01470  316750 ..  316765 +  -5.4  -2.87564   AAACAAATGTCCCCC              TGGTAG AAAG CTACCG               TCTGTCCAGGGGTGA  50 64
CTRC46_01480  317991 ..  318002 +    -3  -2.54636   AACCATAGTTACGGG                GAAA TCTC TTTC                 ATGGTTTATTTTAGA  41 42
CTRC46_01485  319724 ..  319746 +  -6.3  -4.99638   TGACAAAAAGAAAAA           GGAGAGC TGTTGCTGT GCTCTCC           TTTTTCTCTAAATAT  79 55
         rnc NONE
CTRC46_01535 NONE
CTRC46_01540  330126 ..  330138 +  -2.7  -4.70515   AAAAACTGGTGGCCA                CAGTA ACT TATTG                TTTGTTTTGGCTCTG  65 512
CTRC46_01595 NONE
CTRC46_01665 NONE
CTRC46_01670  361705 ..  361727 + -13.6  -2.83715   AAAAACCTAATGAGA           TAGCCAATGA TTC TCATTGGCTA           TCTCCTCCTGCTCAC  93 31
        tpiA NONE
        xseA NONE
CTRC46_01710 NONE
CTRC46_01715 NONE
CTRC46_01720  370457 ..  370471 +    -5  -3.68261   AATATTTTGTATAGT               TGAAGG CTT CTTTCA               TTTCGGATATTCTAG  57 56
CTRC46_01725  371957 ..  371969 +  -3.4  -2.76442   GATGCGCTATCCCCC                TCTC TTGAC GAGA                TAGTTCCATAATCAT  44 2
CTRC46_01730  377544 ..  377557 +  -3.9  -2.64091   AACCCATTCATAGTT               TTCTT CATC AAGAA                TAGTATAGCATGATT  45 206
CTRC46_01735 NONE
CTRC46_01740  379439 ..  379464 +  -3.2  -2.88544   TAGTCCTAAAAACAT         AGGCAGAAGA GCAGGA TCTCCTGCCA          TCTCTCCACATACAG  43 200
CTRC46_01765  383748 ..  383773 +  -9.8  -5.07486   CTGTTCTAAAAAAAA         GCGCTCCT-GT TTATC ACTAGGAGCGC         TTTTTGTTGGAAATG  93 43
CTRC46_01790  390861 ..  390888 +   -15   -2.8598   TGGGGTTTAAATCGT        GTTCTCTGAGCT GTAA GGCTCAGAGAAC         CTTCTCTCTTATTCT 100 31
CTRC46_01795  391336 ..  391359 +  -5.3  -3.79678   AGCTATCTGATAAAA          GGAGATCTT TCGTAC AAGCTCTCC           TTCTTGTGAAAGCTT  62 39
CTRC46_01805 NONE
        xerC  393613 ..  393627 +  -2.8  -3.72405   CAAACTTCTTGTACT               CTAAGA AGG TCTTTG               TTATCCTTTTGTCCA  51 50
CTRC46_01815 NONE
CTRC46_01820 NONE
CTRC46_01825 NONE
CTRC46_01830  399658 ..  399684 +  -8.1  -6.17268   GGATAACAAAAAAAA         CCAAACTAGTT TGTCC AACCAGTTTGG         TTTTTTTTCTTATCG 100 35
CTRC46_01865 NONE
CTRC46_01870  406678 ..  406689 +  -5.8  -2.64726   AAGCCTCGAAGAGCA                CTGC TAAT GCAG                 CTTGCTCTTCTACCC  54 41
CTRC46_01915 NONE
CTRC46_01920 NONE
CTRC46_01925 NONE
        aroB NONE
       aroDE  419833 ..  419844 +  -2.2   -2.9704   CTATGCTGCTTCTTC                GTCT TTGG AGGC                 TCTATGCGTCTTTGT  42 52
CTRC46_01940  420675 ..  420699 +  -5.8  -3.10498   CTGGCAAAAAAATCT          TTTTTCCACT ACACG GGTGGAAAAG          CTTTATTAGAGGTTG  57 67
CTRC46_01945  422085 ..  422095 +  -5.4  -2.99545   GTTTATAGCGTGCGA                 GCTA ATT TAGC                 TATCTAATCTGTAGA  53 8
CTRC46_01950  422735 ..  422745 +  -6.8  -3.23393   TTAAATTTCGAAAAT                 GCAG CGC CTGC                 TGTTATCCAATAAGA  61 206
CTRC46_01955  424273 ..  424303 + -12.8  -4.40333   TTATCTTTTCAAAAG       GAACTGGTTCTTTT TCA AAGAGAATCAGTTC       TTTCTATTCTTTAAA 100 73
CTRC46_01960  425460 ..  425486 +    -8  -2.84518   GAGCAGCCTAACTCT         CCCCTCTCTTCT TAA AAAAGAGAGGAG         CCTTTTTTCCTTACA  62 30
CTRC46_02005  434215 ..  434226 +  -3.6  -3.23332   AAAAACTGTTCAATA                GCTC GACA GGGC                 TCTATTCTATGCATA  48 523
CTRC46_02025  439254 ..  439268 +  -5.7  -4.07568   CAAAATATTCTCCTT               CTCCT TACTC AGGAG               TTTTAAAAGAAAACG  66 354
CTRC46_02035  440730 ..  440744 +  -8.6  -4.20368   AAATTACGCTGGACA               GATGAG AGT CTCATC               TTTATATTACCGTCC  83 61
CTRC46_02040 NONE
CTRC46_02045 NONE
CTRC46_02055 NONE
        hrcA NONE
CTRC46_02065  447907 ..  447919 +  -4.1  -3.12327   AAAAAGAATAATTAT                CCTAG AAA TTAGG                TGTTCAATATGAGCG  48 30
        dnaK  449931 ..  449966 +  -6.8  -5.75945   TTTATTCATCTTCCT    TAAGCAAGAGCCTCTT GAAA AAGGGGCTCTTGCAGC     TTTTTTTTAAAAAAT 100 46
CTRC46_02075  452417 ..  452430 +  -2.3  -5.02074   CGTTTCGTCTAGGCA               GACTC GTCC GCGTC                TTTTTTCAAAACTCC  69 155
CTRC46_02080  453710 ..  453721 +  -5.8  -5.89921   GAATCCGGCTTACTC                GCTC TTCC GAGC                 TTTTTTTATTATAAT 100 428
        nrdR NONE
CTRC46_02125 NONE
        lspA  462639 ..  462649 +  -2.6  -2.50607   GAAAGTAAAAAATGC                 TTTT AAC AAAA                 AATTCTTTCTTTCAA  41 20
CTRC46_02135  464316 ..  464326 +    -4  -2.52464   TTTTAACTTTCAATG                 TCAT ATA ATGA                 TGGCTTGCAACCAAG  44 234
CTRC46_02140  465594 ..  465607 +  -5.3  -3.41222   TTATGAATTAGCATC               GGAAT GACC ATTCC                TATTTGAAATTGGGA  57 19
        lpxB  467518 ..  467530 +  -4.8  -3.23881   TAAAAAATCTTGGAT                CGCT AGAAA AGCG                CTTTCTGTTTATAGT  54 59
CTRC46_02150  470566 ..  470599 + -19.9   -4.6575   CTCTGTATCTTCCTA     GTAAATTAGGCAAGG AATA CCTTGCCTAATTTAC      TTTTCTGATTTATCT 100 73
CTRC46_02155  475915 ..  475939 + -14.3  -3.66883   CTTCTAATTCTTTTT          GGCCAGCCTCT TCA AAAGGCTGGCC          TTTACGATCTCTTAA 100 34
CTRC46_02160  481422 ..  481443 + -12.3  -3.31461   TAAATATCCTGGAAA           GGCAGCTCT CGCA AGGGCTGCC            TTCTAGGAATCCCTG  89 42
CTRC46_02165 NONE
CTRC46_02170  483480 ..  483492 +  -4.8  -2.77834   CTGCTGCAACACTTT                TGGG AGATG CCCA                TGATCTCTATTCTCT  50 10
CTRC46_02175  484852 ..  484869 + -11.3  -2.84841   CAACCAAGCGAATTT             CTCCAGG TTTA CCTGGAG              TAGCTTTTGTTGGAG  81 510
CTRC46_02195  487343 ..  487362 +  -2.1   -5.2853   TTCTGTTCCTTTCAT            AAGCAAC AGCAGA GTTGCTA             TTTTCTTTTTAAATC  72 132
CTRC46_02200 NONE
CTRC46_02205 NONE
CTRC46_02210  488336 ..  488351 +  -2.6  -3.25598   AAGCCTCGAGTCTTT              TTGTGGA CTC TCC-CAA              TAATTTCTTTTACAG  46 103
CTRC46_02215 NONE
CTRC46_02220  490054 ..  490075 +  -3.7  -2.83747   ACCCTACCTTCAACT           CGC-TCTCTT TTC AAGTGATGCG           TAGTTATCAAAGTTG  45 40
CTRC46_02225  492166 ..  492191 +  -6.9  -2.88249   AACAGCTGTTTTGAT         AGGGTCTTTCCT ACT AGGAA-GACCCC         TATCTAAAGGATGTG  60 109
CTRC46_02230 NONE
CTRC46_02235 NONE
        ubiE  495031 ..  495050 + -12.2  -3.03998   TTCCAGACGCCCTCC            TCCTCGCA AGTG TGCGAGGA             ATTCTTCTTCTGTAT  86 249
        hemD  499826 ..  499853 +  -8.6  -3.28785   ATTTATTTTAATGAA        GATCTCTTCA AGAAGTTG TGAAGAGATC         TTACCTCTTTTAGAG  72 54
        ispF  500485 ..  500495 +    -4  -2.97747   AGCTCTCGTACCGCC                 TTAG GAC CTAA                 TATCTGCTCTAAAGC  47 74
CTRC46_02305  505508 ..  505519 +  -4.4  -3.49419   CGAGTAGGTAAACAA                CCAA GTAC TTGG                 GTTTTTATACAACAA  53 88
CTRC46_02310  507558 ..  507582 + -15.8  -3.67296   AGCTCAATAAAATCT          GGGAGGAGGA CTCTT TCCTCCTCCC          TTTCCATACATCATC 100 31
CTRC46_02330  511121 ..  511137 +  -2.9  -3.42574   TAGCCACATATAGCA              GAGGGAT TAC AGCCTTC              TTATGATGCACTTGA  48 222
CTRC46_02365 NONE
CTRC46_02375 NONE
         cmk NONE
CTRC46_02385 NONE
        argS  525714 ..  525724 +    -4  -3.66216   TCTCGCGCTAAAACC                 TTAG CTC CTAA                 TCTTTCTAATTTCCC  54 100
CTRC46_02400  530322 ..  530332 +  -5.4   -4.4017   GGTAAACATCGTCTA                 CATC GTC GATG                 TTTTCTAACCATTCA  68 106
CTRC46_02420  533399 ..  533423 + -13.7  -2.94669   GAAATTGACTCACGT          GTTCCTCGTCT TTA AGATGAGGAAC          TAGTTCATTCTTTTT  95 45
CTRC46_02425 NONE
        ispD NONE
        truA  535964 ..  535988 +    -5  -4.17657   CTACCATAGTGGCTG         GGATT-CCGGC TAAT GCCTGCAATCC          TTTTACACTATCCTC  63 102
CTRC46_02445  537327 ..  537355 +    -9  -4.09864   AAGGATATTTCCTGT        CAGGGGAAGAAA CTCTA TTTCTTCTTCTG        TTTTCAGACCTAGAT  79 105
CTRC46_02450 NONE
CTRC46_02455  538899 ..  538912 +  -6.7  -3.32844   CCATCCTATGGACTC               CTGCT TAAG AGCAG                TTATCAAATGCAAAA  61 18
CTRC46_02460  540203 ..  540219 +  -5.1  -2.73542   CAACTGGATAGAGTA              CCTGG CTTCGGA CCAGG              TGGTTGGAGGTTCGA  50 119
CTRC46_02465 NONE
        recO NONE
CTRC46_02485 NONE
CTRC46_02490  544015 ..  544027 +  -7.7  -2.71712   TGCCAGAGAAGCGAC                CGAAG CAG CTTCG                ATTTCCGCACCAAAA  62 276
        pheT NONE
CTRC46_02505 NONE
CTRC46_02510  548671 ..  548690 +  -7.2  -2.79302   TCAACATAATAGCGG            GAG-GCCAT AGA ATGGCGCTC            TCTGATGGAAATGCT  59 111
CTRC46_02550 NONE
CTRC46_02555  557006 ..  557017 +  -4.4  -3.39841   AATTTCAAGACAATC                TCGT ATTC ACGA                 ATTTCTTTCTTGGGC  51 176
CTRC46_02590  563015 ..  563039 +  -7.9  -3.02263   TTTTCAAACGGCCTA          GCAGTAAATGC ATA GCATCTATTGC          TGTTAAACCAGCTAT  62 94
CTRC46_02635  573098 ..  573126 +  -3.9  -3.82604   GATTCTCCTAGGCAT        TAGCTGAGTCTTT TCA AAAGACTTACCAA        TTATTCCTTGCGTAA  55 150
CTRC46_02640 NONE
CTRC46_02645  576002 ..  576016 +  -2.8  -3.09273   GCTTCTTTAGGATTC               GTTGCT CCC ATCAAC               TCTCTGTTACGGGCG  44 236
CTRC46_02845  602932 ..  602956 +    -8   -3.7941   TTAGACAAAAAATGC         GCTC-TTTAGG CACC CCTAAAAGAGC          TTCTTCTAAAGAATC  72 314
CTRC46_02870 NONE
        dnaE  612724 ..  612746 +   -12  -2.71924   GGCTCTCTAGCAAAC           GAAGGCGGAG CTA CTCCACCTTC           ATTTCAAGAGAGATC  85 168
CTRC46_02885 NONE
CTRC46_02890 NONE
CTRC46_02895  615848 ..  615862 +  -9.2  -3.21909   TCCATCTATTGAAGG               CGGGCG TAA TGCCCG               TAATTCTTTTTCTGT  75 50
CTRC46_02905  617764 ..  617779 +    -4  -4.68103   CTTTTTTCCTGTCCC              GTTCTT TCTC AAGAGC               TTTTGTTCAGATTGC  66 113
CTRC46_02910 NONE
CTRC46_02915  619395 ..  619408 +  -3.9  -2.72739   CTAATTCATCCTTTA               TTCTT TCCA AAGAA                CTTCTGTGACTTGGG  45 101
CTRC46_02920  620730 ..  620756 + -13.9  -4.30995   CGCAATGTTTGAAGC         CATCCCTTACT GAATA AGTAAGGGATG         TTCTTTTGTCCGGAA 100 51
CTRC46_02925  624529 ..  624543 +  -2.8  -2.90075   GTATTACCTTGATTT               TTTCCT CCT AGGAAC               TATAATTCGGGAGGG  43 77
CTRC46_02930  625174 ..  625187 +  -2.4  -4.36914   TCTCCTGCTACCACT               TCTC CTCATT GAGA                TTTTATCCACCCAGA  59 64
CTRC46_02935 NONE
CTRC46_02940 NONE
CTRC46_02945 NONE
CTRC46_02950  629593 ..  629613 +  -3.9  -3.06162   TTCTTGTGCAATAAA            TCAGAGAGA TCT TCTCACTGC            TATTACACTCCCATA  48 27
CTRC46_02955  629856 ..  629870 +  -2.1  -2.68093   CAAAGGATCCCTACC               TCGTC AGAAG GATGA               AATTTTTCAGTTTAA  40 11
CTRC46_02960 NONE
CTRC46_02965 NONE
CTRC46_02970 NONE
CTRC46_02975  633076 ..  633090 +  -2.8  -5.45802   GACCTTTGGATTTGT               GTGC AAATCAC GCAC               TTTTTGTTTTAGAGA  80 458
CTRC46_03035 NONE
CTRC46_03040  646083 ..  646093 +    -4  -3.34488   GAAATAATCGTCTCG                 TCTT ACA AAGA                 GTTTTTAGAGAGGTT  49 34
CTRC46_03045  647571 ..  647581 +  -2.6  -5.14965   CTTAGCCGCCGCAGC                 TTAA CTA TTAA                 TTTTTTGATGGAGAT  70 22
CTRC46_03050  648967 ..  648994 +    -7  -5.35815   AACTCAGCTTCAGAA        CCGTAGGCATCCT AAA AGGGC-CCTACGG        TTTTTCTTTACTCTG  91 68
        thrS  652203 ..  652235 + -12.1  -4.43397   TTCCTTATAGAAGGC      CGGGCTTGCATAG ATTCTGC CTATGCAAGCCCA      TTATTTCTTTTCACA 100 31
CTRC46_03065 NONE
CTRC46_03070 NONE
CTRC46_03075  654744 ..  654761 +  -7.1  -3.01791   ATCTATTCCTAACAA             TCATCTT TCTA AAGATGA              TGTTACACAGCCCCT  61 40
CTRC46_03080 NONE
CTRC46_03085  658128 ..  658138 +  -5.4  -3.88438   ATTAACCGTTCTAGA                 CAAG GAT CTTG                 TTATGTTTGATGTCG  63 174
         eno  659490 ..  659500 +  -5.4  -2.90982   TGCTTGAGGATTTTT                 CTCT GGG AGAG                 TATGTACAACTTTAT  53 100
CTRC46_03095  661552 ..  661575 +  -3.2  -3.70465   ATTTTTTCCTTTCTA          CTTCTTTATCG TGC CGTT-AAGAAG          CTTTTTTCAGTTATC  51 82
CTRC46_03100 NONE
CTRC46_03140 NONE
CTRC46_03145 NONE
CTRC46_03150  674967 ..  674981 +  -4.2  -3.14564   TTTTCATATTAGACT               GCAGGG AAA TTCTGC               TTGATGAAAGGCTCC  50 7
        tolB NONE
CTRC46_03160 NONE
CTRC46_03165 NONE
CTRC46_03170  677981 ..  677991 +  -3.2  -3.28924   AGTTAGCTGGACAAA                 CCAT TCC GTGG                 TTCTCAAAGAAGATC  47 108
CTRC46_03190  681786 ..  681802 +  -4.5  -3.31799   TTTTGTCATCCAAAG              GGATTTT ATG AAAATTC              TTATAGCCAGTTCTC  52 15
CTRC46_03195  682916 ..  682927 +  -5.8  -3.01712   CTTCCCCTGCGCGAA                CCGT AAGC ACGG                 TGTTCAAAAGAAGAA  54 519
CTRC46_03210 NONE
CTRC46_03215  686689 ..  686713 +  -9.3  -4.28361   CAAGAGAAGTTGTTC          TGGGCTGACAG AAG CTGTCAGATCA          TTTTAATAAGATTGA  85 106
        rpsT  694337 ..  694351 +  -2.8  -4.87389   AAGATTTTATTTGCA               TCGATT TAA AAGCGA               TTTCTTTTTACAATG  67 135
CTRC46_03260  695286 ..  695309 + -13.2  -5.95166   CACCACATCCTTGAA          GCTCGCAGGT ACAT ATCTGCGAGC           TTTTTTTTAATTAGA 100 51
CTRC46_03270  700585 ..  700614 + -13.1  -3.65827   AGTTAGACAAATAAA       GCAGCTTAAAAAT TTTT GTTTTTAAGCTGC        TTTCCCTCACGATTA 100 35
CTRC46_03290  706962 ..  706976 +  -8.6   -4.1822   AGATGTCCTAAGAGA               CTAGCT TAC AGCTAG               TTTCTTAGGATAGAC  79 22
CTRC46_03300  710097 ..  710111 +  -4.2  -3.91984   TCTAGGAACATTTGC               GCAACG TTT CCTTGC               TTATTTACGACCTCT  59 500
CTRC46_03310  711726 ..  711742 + -10.1  -2.74192   ATAAAAAAAAGAGAC              GCCCACG TTC TGTGGGC              TCCTCTTCCAAAGTC  74 37
CTRC46_03330  714916 ..  714934 +    -6  -3.31248   TATTGTAAGCTAAAG             GAACCACA TAT TGTGCTTC             TTCTGGGAACTCTTC  57 436
CTRC46_03340  717635 ..  717659 + -12.3  -3.92542   AGGAGGTTACCACAT          TCTCTTTTGCG TAG CGTAAAAGAGA          TTCTTTGACGATAGA  95 71
CTRC46_03355 NONE
CTRC46_03360 NONE
CTRC46_03365  724560 ..  724589 +  -5.9  -4.15044   CTTCTAAAGGAGTGT       TTTTCAATAATGT CTGA GCTTTATTGAAAA        TTTCTTCAAAACAAG  68 481
CTRC46_03380 NONE
CTRC46_03390  736581 ..  736602 +  -2.3  -4.62471   ACGAGGACACCATCA           CAATGCGTAG TCT CTA-GCATCG           TTTTTGCGGCTTCAG  63 389
CTRC46_03405 NONE
CTRC46_03410 NONE
CTRC46_03415 NONE
CTRC46_03420  741438 ..  741463 +  -4.9  -2.86079   CTCTTTTCTGCATCT         GCATTCTTTTTT TTG AAAAAAGAG-GC         CTCTTTCTTGTACTC  50 71
        recA  742732 ..  742771 + -12.5  -4.77173   TATTCCCTATCGATT  CTAATCAAGGAAAAGAAG TTTTT CTTCTTTTCCTTGGT-AG  TTTCTTTTCTCCCCC 100 47
CTRC46_03440 NONE
CTRC46_03445 NONE
CTRC46_03450  746605 ..  746627 + -15.6  -3.28712   GGTTTCTATTATTAA           GACCTGGGCG TTG TGCCCAGGTC           TTGTGAAAAACGGGA 100 76
CTRC46_03475 NONE
CTRC46_03480  749774 ..  749809 +  -4.8  -2.78715   GTTAACATTTCTTAA    CGGTTCGG-AAGGTT GAATAAA ATCTTTTCCGAACCG    TATCATAGAAGGGTT  50 26
CTRC46_03485 NONE
CTRC46_03490  751192 ..  751215 +  -9.6  -4.71382   AGAAATTATGGAAGA          GCGGTAAACG TATA CGTTTACAGC           TTTTTGAGTCATTGT  90 19
        hemA  756409 ..  756429 +  -7.5   -2.5474   AAATGACTCTTTGAT            GCAGTGGCA CGA TGTCCCTGC            GTGTTGTCGATACGA  61 406
CTRC46_03515 NONE
CTRC46_03520 NONE
CTRC46_03525  759914 ..  759924 +  -3.2   -2.8547   GCTAGGACGTATCAA                 CCGT AAA ATGG                 TGTAATGTAAACGGT  44 10
CTRC46_03530 NONE
CTRC46_03535 NONE
CTRC46_03540 NONE
CTRC46_03545 NONE
CTRC46_03550 NONE
CTRC46_03555 NONE
CTRC46_03560  765241 ..  765253 +    -2   -4.0825   GAGAGTCCTCTGTCA                TTCT ACGTG AGAA                TTGTTTGCTTGCCGC  54 55
CTRC46_03565 NONE
CTRC46_03570  769657 ..  769699 +  -9.3  -4.87786   GTACACAGGGGGGAA GTCAAGATGGACTGGAGTTA GCCG TATCTCCGGTTC-TCTTGGC TTTTTATGGAGTTAG  91 102
CTRC46_03610  780277 ..  780288 +    -3  -3.53012   TTGCTCCTGTAAAAG                GTAA GGTA TTAC                 TTTGACAGGGAACGA  47 60
CTRC46_03615  781470 ..  781500 + -12.7  -3.65523   CAGTCCTTTCCTTGG       GTCTAGGGAGAGA CATCC TCTTTCCCTAGGC       TGTCTTTCTTTTTTT  95 182
CTRC46_03625 NONE
CTRC46_03630 NONE
CTRC46_03635 NONE
CTRC46_03640  786285 ..  786305 +  -6.9  -3.58177   CTTCCGTTTTCAAGA            GAGATGC GGAGTGG GCATCTC            TTGATTTGCATTATA  67 45
CTRC46_03645 NONE
CTRC46_03660 NONE
CTRC46_03665 NONE
         pgk  792527 ..  792543 +  -7.2  -6.23545   CTTTGTTAATGAAAA              GCCCTG TTTAT CGGGGC              TTTTTTTTGTTTAAA 100 58
CTRC46_03675 NONE
CTRC46_03680 NONE
CTRC46_03685  796590 ..  796601 +  -5.8  -3.44051   TAGAGCATGAATATA                CGCA GCTT TGCG                 TTCTCCTAATCCACA  59 382
CTRC46_03700  799354 ..  799366 +  -3.4  -4.23674   GTCGAATGGGACAAT                CGTT AGGAA AACG                TTTCTCTTCATAAAA  60 0
CTRC46_03705  800810 ..  800830 +  -3.9  -5.70761   CAATATAAGATCTTA            GCCCTCG TATTGCT CGAGTGC            TTTTTGTTTTCTTTT  89 66
        secA  803954 ..  803979 + -13.4  -4.78848   AGGCTTGTCAAACTA         GGCAATCTCC TTAATT GGAGATTGCC          TTTTCTATTTAGAGA 100 42
CTRC46_03750 NONE
CTRC46_03755 NONE
CTRC46_03760  817647 ..  817660 +  -3.9  -5.93252   ATACTATTGTTTTTC               TGTTT TAAA AAACA                TTTTTTATTTTTAAA  93 76
CTRC46_03765  820014 ..  820035 +  -5.9  -3.28924   TAGATTTAAATAAAA           TCGTTTTAG AGGG CAAAAACGA            TTATGAGAAACCATC  58 28
CTRC46_03770  821325 ..  821348 +  -7.6  -3.30771   CGCTGGCTTCCCCAT          CTTCCTTCTAC GTT GTAGAA-GAAG          TTATCGGCGATATAG  66 140
CTRC46_03805  827429 ..  827439 +  -5.4  -3.12351   ATTTCTGAGAATGCT                 GAGA GAA TCTC                 TTGCATATGCGAGAG  54 293
CTRC46_03815  828613 ..  828637 +  -6.4  -3.19192   GTCATGGGAGAGAGC          TCCCCACTCT TCTGT GGAGTAGGGA          TTCCCTTCGCTAAGC  57 358
CTRC46_03840  831977 ..  831996 +   -10  -6.23545   CCTTAAGAACAAAAA            GAGGGAGG TCTT TCTCCCTC             TTTTTTTTGTTTAGA 100 59
CTRC46_03845 NONE
CTRC46_03850  833189 ..  833205 +  -2.9  -3.89822   TTAGTATTTTGCAAA              GCGTCGA CTG TAGATGC              TTTGTAAAATACCTA  53 47
CTRC46_03875  839676 ..  839694 +  -4.4  -2.57132   GAGGTTTGTGTTATA             CTCTGCGC ACA GCGAGGGG             ATTATAGACAAAGAA  47 55
CTRC46_03880 NONE
        ribH  841494 ..  841512 + -13.2  -5.98781   GTAGAAAAAGAAGAA             CGCCTGAT CAA ATCAGGCG             TTTTTTTTGATTATA 100 47
CTRC46_03895  843934 ..  843964 + -12.5  -4.89567   AAGGCCATTCTAAAG       GCCCCCTTCCCCC GGATA GGAGAAAGGGGGC       TTTTGTATTTTCCGC 100 40
CTRC46_03900 NONE
CTRC46_03905  845986 ..  846000 +  -8.6  -2.60199   TAGTGATAGCAGAGC               TCTTCC CCA GGAAGA               ATGTCTTTGATTGCC  63 110
CTRC46_03950  862973 ..  862983 +  -5.4  -3.51708   AAGATGAAGTCGTTT                 GCTT GAT AAGC                 TTGGTTTCAGGGATC  57 463
CTRC46_03985  879879 ..  879908 +  -7.2  -5.28831   AGAAAGAGAATCATC       GGCTTGCC-CAAA CTCCA TGTGCGGCAAGCC       TTTTGTTTTCTTGAT  91 70
CTRC46_03995 NONE
CTRC46_04000  881502 ..  881516 +  -8.5  -3.61398   AAATAAAAATTAGAA               GGGGC ATTAC GCCCC               TTCTTCAAGAAGGCG  73 35
CTRC46_04020  886085 ..  886103 +  -3.2  -2.81888   GGTAAAAGATCAGAA             TTTCTTTT TAG AATAGAAA             TAGTTAACTTTCAAG  44 40
        mraY NONE
        murD NONE
CTRC46_04035  889226 ..  889253 +  -4.2  -4.07859   CGAATTCGATAAATC        TCTGGAATTATT ATGA AATGGTTCCTGA         TTTCCTGTTTATTAG  61 29
CTRC46_04040 NONE
        murG NONE
CTRC46_04050  893995 ..  894020 +  -2.5    -5.626   TGTGAGAGAGCCGTT         TTCAGGTTGAG CAAG CTCAACAAGGA          TTTTTTTCTGCAATC  84 242
CTRC46_04065 NONE
        miaA  896988 ..  897023 +  -5.4  -2.81223   AATGCGGTAATAGAG    TTCGGGAGACGCTT GGTGAGGG ACGCGTCTCCCTAG     TGCTGTATTATTAGG  50 306
CTRC46_04080  899565 ..  899593 +    -9  -5.87688   AGGAGTAAAAACAAG        TAGTCAAAAGGT GAAGA GCCTTTTGGCTA        TTTTTTTTAAATTGT 100 54
CTRC46_04085 NONE
CTRC46_04090 NONE
CTRC46_04095  902095 ..  902132 + -12.8  -5.01546   AAAAAAACTTGGTTA   GGAAGGGCCGTTGTGG AATCTC CCACAACAGCCTTTTC    TTTTTCTGTCGATTT 100 55
CTRC46_04110  904245 ..  904259 +  -3.5  -3.48276   CGATATATCTGTAAC               GAGGC CTCCA GCTTC               TTCTATAAGAAACAC  51 207
CTRC46_04120 NONE
CTRC46_04125  907780 ..  907798 +  -2.4  -3.76186   TGAGGGAAATGGGTT             TTGAAGGA AGC TCTTTCTA             TTGATTTTATCACTA  50 68
CTRC46_04130  909044 ..  909063 +  -8.6  -3.03865   CCAAATTTTGTTTAA            TCAGTGTG TGTA CACGCTGA             GTTTCCTTTAAAGTA  69 156
CTRC46_04145  912449 ..  912478 + -12.4  -3.63744   TTCTCGGATTTCTAA       GAAAGAGAAAAC GATCCA GTTTTCTCTTTC        TATTTTGGAGAAAGC  90 87
        lysS  914211 ..  914257 +  -7.6  -2.79796   TTAAAGTTTTTTCAC TTTCATCCC--GGTTTTGCCAT CTTCA ATGGCAAAACCTCGGGATAAGA TCTCATCACGTAGAC  62 37
CTRC46_04165  917020 ..  917048 + -11.1  -5.82388   ATCTAGTATTCCTCC        CCATTCCATGC CTCTATA GCGTGGAATGG        TTTTTTTTAGGATTT 100 54
        rpmJ NONE
        rpsN  918537 ..  918552 + -10.4  -5.56568   TAGGACTTGTGTTGA              GCCCCT TGAA AGGGGC               TTTTTTTACTCGTCT 100 38
CTRC46_04190  919092 ..  919102 +  -2.6  -4.15222   TAAGTTCGTTGTAAA                 TAAT CAC ATTA                 TTTCTTAGAGCAGCT  55 7
CTRC46_04200  920208 ..  920223 +    -9  -5.95166   AACTGAAGAATAAAA              GGCTCT GTAT AGAGCC               TTTTTTTTGGTTAGG 100 28
CTRC46_04215 NONE
        dnaG  926730 ..  926743 +  -3.1  -4.38154   ATTAGCTCGTTAGTT               CTCAA TTTA TTGGG                TTTTATGAGAAGTCT  62 101
CTRC46_04225  927049 ..  927066 +  -7.7  -5.72207   TCAAGAGTCTATAGA             CTGGGAA TTTC TTCCCGG              TTTTTTTAATTTAAG 100 48
CTRC46_04230  927669 ..  927694 + -14.9  -5.01422   CTTTATAAAAAAAAG         GCCTTCTCTTT GTGA AAAGAGAAGGC          TTTCTTTTTGTCTGG 100 51
CTRC46_04240  931923 ..  931936 +  -5.3  -3.38581   ACGGTAGGTTGTCAC               TGCTT CCAA AAGCA                TGTTTCGGAATTCAT  55 149
CTRC46_04250 NONE
CTRC46_04255  934934 ..  934948 +  -5.8   -3.1505   GGGATTTACTGTTCA               CTTTTT GAA AAAAAG               TTCCTGAAAAATAAT  57 48
        rpsF NONE
        rpsR NONE
        rplI  936185 ..  936217 +  -3.4  -6.47325   TTAAACTTTTTGTTT     GTTG-GGGGAAGAGA TTCT TTTCTTCCCCACCTC      TTTTTTTTATTTTTT 100 37
CTRC46_04275  937353 ..  937373 +  -2.5  -3.04398   TCGATAGAAAAAAAC            AGCTCTG CCCCCTA CAGAGCC            CTTTTAAAGGGGGAC  43 275
CTRC46_04310  945431 ..  945469 +  -8.2  -4.68593   TGTCCCTTGTCTGTC   GCGGTATATTTTGGGGAG TCG TTCCACAAAATGCATCGC   TTTTTGAATCCTGGG  86 161
        rpmF NONE
CTRC46_04320  946730 ..  946741 +  -3.6  -3.62695   GATCACCTTTTCAGT                GGCC TAAG GGTC                 TGTTCTTTATAAAAA  53 44
CTRC46_04325  951555 ..  951582 + -12.9  -6.11243   ACAGCAACCATTCTA        TCCCTAATCTC CCATCA GAGATTAGGGA         TTTTTTTTATTAGCT 100 57
CTRC46_04340  952556 ..  952586 +  -3.3  -5.86332   TTGTTTTTTTAATAG      AAGCCTGGCCTGTA GTAA TA-AGACCAGGCTA       TTTTTTTTGGATTCG  91 63
        glmM NONE
CTRC46_04360  956726 ..  956745 +  -6.5  -5.47431   TGGCTAAATCTGTTA            CTGTAGA GTAAAA TCTACAG             TTTTTTCTCTCTTGA  89 15
CTRC46_04365  958057 ..  958086 + -10.7  -4.03413   CACTTCAAGTCTCAA       GCTCGCATTCAGG ATTT CCTTTATGCGAGC        TTTCTGTAAACAGAT  85 47
CTRC46_04370 NONE
CTRC46_04375  959448 ..  959458 +  -3.2  -3.54653   TTTTAAATTAGGAGA                 TCTC CAT GGGA                 TTGTATGATCGCGAT  51 62
CTRC46_04380  960205 ..  960231 + -12.5  -5.28176   TTCTAGGAAAAAAAA         GAGGTATTTAG AGTTC CTAAATACCTC         TTTTTTATGGGTGAA 100 61
        sucC NONE
CTRC46_04395  963277 ..  963288 +    -3  -3.43774   TCAGAGTAGTCTCCT                TGAT TTGC ATCA                 TTAGATTTTGTATGC  47 61
CTRC46_04400  964910 ..  964927 + -11.3  -6.41805   AGCTAGTCTAGTATG             GGGACTC AATC GAGTCCC              TTTTTTTTTTAATAA 100 62
CTRC46_04405  968005 ..  968018 +  -2.4  -3.53012   GCATTTTAAATAAAA               CCAA AAGTTA TTGG                TTTGAGGAAGGAGGC  46 32
CTRC46_04420 NONE
CTRC46_04425  974970 ..  974991 + -10.2   -5.9873   TCAAAATAGGAGAAA           GCCTCAAC CATAGA GTTGAGGC            TTTTTTTTGTCATAC 100 49
        trmB  975951 ..  975976 +  -4.7  -3.07655   TAATACCCCATGTGA         CTCGCATCCTT TATA AATGATGTGGG          ATCTTTTTTCAAGAG  52 96
CTRC46_04435  976613 ..  976627 +  -2.1  -5.08011   ACGGACTTCTTTATG               TAAGG AAATA CCTTG               TTTTTTAAGAGTTTT  69 58
CTRC46_04445  977957 ..  977970 +  -6.7   -2.6547   CATCAGCAGGCTAAC               GAGAG AATC CTCTC                CTTCTGGATCTATTT  56 394
        infC NONE
        rpmI NONE
        rplT NONE
        pheS  980784 ..  980821 +  -6.3  -6.22691   TCCTTTTTACGAGAA   CCTTTTGGGGTAAGAGT TGAG GCTCTTCCTCTGAAGGG    TTTTTTTTGTTCTTA 100 129
CTRC46_04480  983410 ..  983422 +  -7.7  -3.38604   TCATGTCAAAGAACT                GTGTC AAA GACAC                TTCGTGATTTTCATC  66 468
CTRC46_04495  986262 ..  986277 +    -4  -3.86015   ACTTCTTGTTTTTTA              TCTCTA TAAT TAGAGG               TTTATAAACAAAATA  55 93
CTRC46_04500  989119 ..  989142 + -12.5  -6.06529   TCTGGAGGTTTAGGA          GAGAGCCCT TTTATT AGGGCTCTC           TTTTTTTTGTGTGTG 100 48
CTRC46_04515 NONE
CTRC46_04520  992891 ..  992906 +  -3.2  -2.75481   ATTAAACTTTCTGGT              CCGAAG AAAG CTTGGG               TGCTTCCAATTAACC  43 253
CTRC46_04545 NONE
CTRC46_04550  996820 ..  996840 + -11.3  -3.18884   TTCGTGCCTCCCAAT            GGTTTATTG GGT CAATAAACC            CTTCTTTCTTTCCGA  84 86
CTRC46_04595 1006162 .. 1006185 +  -3.9  -4.57073   TCTGCCTATTCTAGG          CCCCTTTTT GAATGG AAAAATGGG           TTTTTGGAGAACATC  66 92
CTRC46_04600 1008037 .. 1008066 + -12.3  -4.03586   GTTCATAGTAAGAGG       GGGCTTTGCGGATT TAT AGTCC-CAAAGCCC       TTGTTGTGTTTAAAC  95 52
        ispH 1009035 .. 1009063 +    -6  -2.71859   GAATTATAATTAGAG        AAGTCAGATGAG TTTAT CTCATCTGACGG        AATTTTTCTCACTTA  54 32
CTRC46_04640 1015195 .. 1015232 +  -4.9  -6.50115   AACGATCGAGTTTTT   TCCCTCTGATAGACA AAAATACA TGTTCTTCAGAGGGA    TTTTTTTTTTGTAGT 100 270
CTRC46_04650 NONE
CTRC46_04655 1019297 .. 1019319 +  -2.1  -4.41114   TCAGCTACTCTGATT          TTCT-CTGTA ACGC TACAGTAGGA           TTTGTTCTCTAATCC  59 5
CTRC46_04680 NONE
CTRC46_04685 1034347 .. 1034383 +  -3.7  -5.86061   CTAGAATTTTAGAGA    GCAGGATCTTTTGTTTG ATT CAAACAAAAGGATGAGC    TTTTTTTTCATAAAA  93 168
CTRC46_04690 1035248 .. 1035271 +  -9.7  -4.39426   AGAAAAAAATGAAAA          GTCTTAGAG AAGGGC CTCTAAGAC           TTTTCTCAAGCTCTA  89 58
CTRC46_04700 1038109 .. 1038138 +  -3.1  -2.72851   TATCAAATTAGATAG       TTTTTAAAAAATT AAAT AATCTTTTAAGAA        ATCTTATATTTATTA   0 59
CTRC46_04695 1035242 .. 1035277 - -12.8    -5.626   GACGTGAGAAAAAAA    TGAAAAGTCTTAGAGA AGGG CCTCTAAGACTTTTCT     CAAGCTCTAAAACGC 100 58
CTRC46_04675 NONE
CTRC46_04670 1021927 .. 1021942 - -11.8  -3.52341   ACGGGAAGAGGATAA              GGGGGC CGGA GCCCCC               TCTATTACTCTAGAA  85 35
CTRC46_04665 1020510 .. 1020539 -  -5.2  -4.40199   AAAAATAGTAAGAAA      TAAGAGCGACCATC TCTC GATGG-C-CTCTTA       TTTAAAAAGATTTTT  67 56
CTRC46_04660 1019156 .. 1019177 -  -2.3  -3.55444   GGGGGATCGGGGAAA           GGTTTTCGAG AGC CT-GAAATCC           TTACACCTGAAATCG  47 176
        xerD 1014906 .. 1014916 -  -3.2  -4.15044   TGCCCTTGTAAGAAA                 CCTG TTC CAGA                 GAAAAAGAAGAAAAA  58 56
CTRC46_04630 NONE
CTRC46_04625 NONE
CTRC46_04620 NONE
CTRC46_04615 NONE
CTRC46_04610 1009037 .. 1009061 -   -13  -3.63046   ATTATAATTAGAGAA          GTCAGATGAG TTTAT CTCATCTGAC          GGAATTTTTCTCACT  95 44
CTRC46_04590 1002306 .. 1002344 -  -7.4  -3.00404   ATACGAGAACAAGTA  TGTCGCCCGCCCCAAGT AATTCA ACACGGGGCGGGAGA-A   GATCAGAGACTTGTT  61 53
CTRC46_04570  998923 ..  998956 -    -6  -3.99985   TATATATTGAAAGAA     GGGATCTTTCAGTC CTTTGT AACTGAGGGATCCC      CGAAATCGTCACACA  66 145
CTRC46_04565 NONE
CTRC46_04560 NONE
CTRC46_04555  996324 ..  996338 -  -5.7   -4.4261   CTGTGAAGAGGAAAA               TAGCG GGAAG CGCTA               TGCTGAGGAGTGCTT  73 403
CTRC46_04540 NONE
CTRC46_04535 NONE
CTRC46_04530  993333 ..  993348 -  -4.7  -3.66288   TATCGGGGAAGATAA              CTCTC ATGAAG GAGAG               GCCTTTTTACAAAAG  57 151
CTRC46_04525  992272 ..  992289 -  -5.7  -3.54543   AGGGAGTTGGTTAAA             TGTTTTT TTAG AAAAACA              TCCTTTCCATCAAGT  59 371
        rpsO NONE
CTRC46_04505  989258 ..  989281 - -12.6  -5.64304   CAAGACAATAAAAAA          GGCTAAGAAA AACC TTTCTTAGCC           TTGTTTTTCAACGAA 100 55
CTRC46_04490 NONE
CTRC46_04485  982575 ..  982597 -  -2.8  -2.76696   CCTTCTTTGAAGAAC           GTTTTCTTCT CAA AGAAAAAAAT           CTTATTCAAAAATGA  42 392
        nusB  977498 ..  977515 -  -7.7  -3.55368   AGGGAAGCGACACAA             GCCCAAG ATAT CTTGGAC              GGAGTCGCTTCCCTT  70 95
        murB  976532 ..  976548 -    -3  -3.56092   CCACTATTCTGTAAA              TAGAAG GAATG CTCCTA              GGTTATTTCTTTTTC  49 54
CTRC46_04415 NONE
CTRC46_04410  968005 ..  968018 -  -2.4  -4.88918   GCATTTTAAATAAAA               CCAA AAGTTA TTGG                TTTGAGGAAGGAGGC  66 19
CTRC46_04385  960205 ..  960231 - -13.2  -5.86061   TTCTAGGAAAAAAAA         GAGGTATTTAGA GTT CCTAAATACCTC         TTTTTTATGGGTGAA 100 61
CTRC46_04350 NONE
CTRC46_04345  952483 ..  952499 -  -2.2  -5.61881   TTCGAAAAAGAAAAA              CATGGT ATCAA ACCAGG              AAGACGTGGTTCGAT  79 128
CTRC46_04335 NONE
CTRC46_04330  951155 ..  951192 -  -9.9  -3.88232   GGCTTTACAGAACAA   GGAAGAGAAGCGCGTTC TTTT GAAGACGCTTCCCTTAC    CAATATCACCATTCC  84 429
CTRC46_04305  944525 ..  944549 -  -2.9   -5.1101   CGATTAGGTAAAAAA          TTCTACAAAAA TGC TTGTTGTTGAA          TAGTTTAATTTAGAA  70 157
CTRC46_04300 NONE
CTRC46_04295  941795 ..  941823 -  -3.9  -3.42459   CATTGATAACAGGAA       GGTGGTTGTCCA TTTATT TCG-CAACCACC        GGGTTGAGGCTTTTA  51 61
CTRC46_04290  938884 ..  938922 - -14.8  -2.62761   ATAAAGAAGCAAGAG   GTTTTTCTCGGATGAAGA ACC TCTTCATCCGAGAAAATG   TAAGTACAAGAATGT 100 40
CTRC46_04285  937354 ..  937372 -  -6.7  -4.50122   CGATAGAAAAAAACA             GCTCTGC CCCCT ACAGAGC             CCTTTTAAAGGGGGA  75 59
CTRC46_04280  936876 ..  936895 -    -2  -4.96996   TTGAAAGAAAAGAAA            CATTGGCT AGAA AGCCTGTG             GGCGGAACTTCCTGT  68 203
        glgA  931775 ..  931796 - -14.5  -5.00895   CTTATTACAGAAAAA           TGACTCGCC GGAT GGCGAGTCA            TAGGGAAGTTTATTG 100 35
CTRC46_04235  927668 ..  927695 - -11.4  -5.93809   CCTTTATAAAAAAAA        GGCCTTCTCTTT GTGA AAAGAGAAGGCT         TTCTTTTTGTCTGGA 100 56
CTRC46_04210 NONE
        uvrC  920208 ..  920223 -    -9  -4.91987   AACTGAAGAATAAAA              GGCTCT GTAT AGAGCC               TTTTTTTTGGTTAGG  91 53
CTRC46_04195  919164 ..  919188 -  -3.7  -3.85698   CTTTTTCTCGAGAAA          CAAAAACAATC AGG AATTACTTTTG          CTTAGGATGAAGAAC  55 17
CTRC46_04185  918346 ..  918360 -  -6.4  -4.46976   AGGAAGAAAGAGAAA               GAGCTC GGG AAGCTC               TCAATAAAATGAGAA  74 223
        rnpA  916688 ..  916698 -  -5.4  -3.32521   ATTAGATCCTGAGAA                 TGAG CAG CTCA                 CGCATTTCACAGTGG  55 396
CTRC46_04160  915759 ..  915775 -  -5.2  -3.53444   GCATTCCTTGTTAAA              GGAATA GAAAA TATTCC              AAAATCAGAAGCATA  56 4
        cysS  914194 ..  914217 -  -2.5  -5.69379   ATAGAAGCAAAAAAA          GATTAAAGT TTTTTC ACTTTCATC           CCGGTTTTGCCATCT  85 4
CTRC46_04140 NONE
CTRC46_04135  908582 ..  908602 -  -8.3  -3.31799   GAGAACTTGCGAGAA            CACGATTAC GTC GTATTCGTG            ACTATTTTGCTCAAA  70 255
CTRC46_04115  903814 ..  903831 -    -2  -4.58213   CAATCAATTAGAAAA             TC-CTGC TATAG GCAGAGA             ATTGGTTGCTAGAGG  63 223
CTRC46_04105  902781 ..  902797 -    -3  -2.61997   TTTTAGACATAAGAT              CACTCT CTATT AAAGTG              TTTTATGCGCAATTA  41 28
CTRC46_04100  902099 ..  902128 - -10.7   -3.1506   AAACTTGGTTAGGAA       GGGCCGTTGTGGA ATCT CCCACAACAGCCT        TTTCTTTTTCTGTCG  78 43
CTRC46_04075  896239 ..  896252 -  -3.9  -3.47941   TACCAAGCATGATAA               GAATA AAAT TATTC                GTGCTTTAGAAATTA  51 485
CTRC46_04060  894372 ..  894385 -  -3.9  -4.60041   ATTTATGGTGAAAAA               TTCTA GAGA TAGAA                ACCTCTTCATTTACG  66 32
CTRC46_04055  893779 ..  893807 -  -7.6  -3.18264   TTCGCTATTCAGTAA       GCTCCAAC-AAGAG AGA CTCTTTGTTGG-GC       AATCAAGCTAATCAT  65 33
CTRC46_04015  882695 ..  882709 -  -8.6  -2.66517   ATTTATTAACAAGAG               CATACC CTC GGTATG               ATAGGCGGATAGTTA  67 48
CTRC46_04010 NONE
CTRC46_04005  881499 ..  881519 - -13.3  -3.50051   TCAAAATAAAAATTA            GAAGGGGCA TTA CGCCCCTTC            TTCAAGAAGGCGTTC 100 14
CTRC46_03990  879711 ..  879745 - -12.2  -3.51934   GGGTTGGTACAAATA     CATCGGTAGCAATGGC TTA GCCATTGCCATGGATG     GGTTTGGAATGTCCG  91 111
CTRC46_03980  872113 ..  872127 -  -5.6  -3.65991   ACTTTTTGAAGAGAA               GAGGCC CTC GGCTTC               AAGAAGGAATATACT  59 57
        alaS NONE
CTRC46_03970 NONE
        hemE NONE
CTRC46_03960 NONE
CTRC46_03955  862437 ..  862451 -  -4.3  -4.71061   AGCCACATTGAAAAA               CGTTT CTTTC AAACG               CGACCAAGACAGGAA  68 101
CTRC46_03945  859241 ..  859267 -  -9.4  -3.70469   AATGAGAAGGGGAAA         GAGGGCCCTGTT GAT AAAAGTGCCCTC         TATAAAAAAGAGAAA  78 52
CTRC46_03940  857904 ..  857926 - -10.7  -3.75738   CAGCATTAGGAATAA           GGCTTTCTT GTTTT AAGAAAGCC           TTTCTAAGAGCACAA  83 15
        yajC  857425 ..  857450 - -14.1  -3.47322   TTTTATTACAAGGAA         GCAAAGCCCAA GGAC CTGGGCTTTGC          TGAAAGGAGCTCGTT 100 42
CTRC46_03930  855547 ..  855586 - -17.2  -4.84527   GTCATAGACTAAAAA  GGAGAAGGGGGTAGCCGC TAAC GCAGCTACCCCCTTTTCT   TTTCTCTAAAATACC 100 468
CTRC46_03925  850021 ..  850062 -  -8.9  -3.57144   TTCGCCATGGTGAAA CTCCCCAACTAGCAGAGCG TGCAGG CGCTCTAC--GTTGGGGAA AGAGAAGTATAATGA  74 78
CTRC46_03920 NONE
CTRC46_03915 NONE
CTRC46_03910  845400 ..  845429 - -14.4  -3.86266   ACAGTAGTACAAGAA       TAGGGCCACGCT TTACAG AGCATGGCCCTA        AATACAGGAGACCTC 100 506
CTRC46_03890  841491 ..  841515 - -11.5  -4.52873   GGTGTAGAAAAAGAA          GAACGCCTGAT CAA ATCAGGCGTTT          TTTTTGATTATAAAT 100 33
CTRC46_03870 NONE
CTRC46_03865  836384 ..  836394 -  -5.4   -2.8806   AAAGTTGCGGAGACA                 TAGG CCA CCTA                 CTAAGAGTATGAACT  52 39
CTRC46_03860 NONE
CTRC46_03855  833128 ..  833144 -  -4.4  -3.77491   CACGAAAGAAATCAA              GCATCT TATCC AGACGC              TACCGTTATGGGGGC  57 55
CTRC46_03835 NONE
CTRC46_03830 NONE
CTRC46_03825 NONE
CTRC46_03820  828212 ..  828231 -  -2.2   -5.3798   GAACAAGAAGAAAAA            TTAG-CATC CGG GATGACCAA            GAAGCTCAAAAGGGG  75 149
CTRC46_03810 NONE
CTRC46_03800 NONE
CTRC46_03795 NONE
CTRC46_03790 NONE
CTRC46_03785 NONE
        gpsA  822424 ..  822446 -  -4.2  -3.05384   TCTTTTCTCATTGAA           GAAGAACCTT ATA AATATTCTTC           TTTTGTATCACGTTG  49 11
CTRC46_03775  821224 ..  821263 - -16.7  -3.88062   AGACATGAGAGGAAA  TCTTCTCTTAATCTCCC TTGAGG GGGAGGTTAAGAGAAGA   GGGTTCGGGGGGTTA 100 38
CTRC46_03745  810850 ..  810862 -  -3.4  -3.68962   CGTGAAGACACAGAA                TACC CATTT GGTA                AGTTATCCGGGAAAA  51 176
         tig NONE
        clpP NONE
        clpX  807474 ..  807494 -  -3.9  -3.37091   ATTCCTAAAAGTTAA            GCAATCGCC TCT GGTGATTTC            TGAATAATGACCGGA  49 1
CTRC46_03725  806181 ..  806199 -  -5.4  -4.05629   ATTAAATCTAAAGAA             CTAAAATA AAC TATTTCAG             AATGTTTTATCGGAG  65 49
        engA NONE
CTRC46_03715  803954 ..  803979 - -13.4  -2.90615   AGGCTTGTCAAACTA         GGCAATCTCC TTAATT GGAGATTGCC          TTTTCTATTTAGAGA  95 77
        trmE NONE
CTRC46_03690  795955 ..  795981 - -13.8  -3.41051   GCATTTTTAGCAGAA         GTTGTGTTGCAC GTG GTGCAACACCAC         ATTCATTTAAATGCA 100 274
CTRC46_03655 NONE
CTRC46_03650  786715 ..  786746 -  -3.8  -4.67608   GACTTTAATAGAAAA      TATCCAAAGGGT AAACCTGA ACCCTTTAGAAA       TGGCAGAAGCTTTTC  67 517
CTRC46_03620  781043 ..  781054 -  -5.8  -3.30797   GTTAAATGCAGAAGA                TGCG GATG CGCA                 TTTTTATATAGGATT  57 487
CTRC46_03605  775111 ..  775136 - -13.3  -5.75342   TTTTTGCAAAAAAAA         CTGGACCCGAC CGAA GTCGAGCCCAG          AAACACGGATAGTGT 100 98
        rpsB NONE
         tsf NONE
        pyrH NONE
         frr  771846 ..  771856 -  -5.4  -3.59023   TGCACAGAAGCATAA                 CTAC ACC GTAG                 CTAACTCTGCTTCTT  59 15
CTRC46_03580 NONE
CTRC46_03575  769741 ..  769755 -  -6.4   -3.2614   CAGTTGGTAGAGCAA               CGCATT CGT AACGCG               TAGGTCGTCGGTTCG  61 164
CTRC46_03510  756286 ..  756300 -  -2.1  -3.77219   ATGATGGAATGCAAA               GCCTT GATAG AAAGC               AGGGGAGGGGGATCT  50 225
CTRC46_03500 NONE
CTRC46_03495  751192 ..  751215 -  -9.6  -3.14454   AGAAATTATGGAAGA          GCGGTAAACG TATA CGTTTACAGC           TTTTTGAGTCATTGT  74 147
CTRC46_03465  747875 ..  747891 -  -3.7   -2.8806   AAACTTCGTCATACA              GAAACAG CAT CCATTTC              TTGAATGTAGGTGAA  45 2
CTRC46_03460 NONE
CTRC46_03455  746605 ..  746627 - -14.9  -3.21099   GGTTTCTATTATTAA           GACCTGGGC GTTGT GCCCAGGTC           TTGTGAAAAACGGGA 100 53
CTRC46_03435  742746 ..  742758 -  -3.4   -4.4959   TCTAATCAAGGAAAA                GAAG TTTTT CTTC                TTTTCCTTGGTAGTT  62 3
CTRC46_03425  741394 ..  741418 -  -5.2  -3.66378   TATATCTCACTTAAA         GAGCTGTTTTA CGTA TAAAA-AGCTC          CCTCCTCTTTTCTGC  57 84
CTRC46_03400 NONE
CTRC46_03395  736086 ..  736097 -  -4.4  -4.91873   TATATTAAGGAAAAA                GGAT TGCA ATCC                 CCTCAAAATAAAAAA  74 175
CTRC46_03385  731495 ..  731505 -  -3.2  -3.76232   GTTTTAAAGAGACAA                 CTAG GGA CCAG                 CTTCTCTTCTCCCAA  53 454
CTRC46_03375 NONE
CTRC46_03370  723763 ..  723775 -  -4.9  -3.41051   TTATCTCTATCAGAA                CAAAA TGA TTTTG                CTCTTCGTGGAATTG  56 370
CTRC46_03350 NONE
CTRC46_03345  717497 ..  717510 -  -3.8  -3.13867   TTAGCGATTAAGAGA               GCTG GTGCAA CAGC                TATAATTAGTTACGC  48 130
CTRC46_03335  714509 ..  714520 -    -3  -2.52742   ATTTGTTTATAACAG                GTTT CCAA AAAC                 TTATATTCGTTGTAT  41 191
CTRC46_03325  713374 ..  713387 -  -2.3  -3.66999   AGCTAGGTATTTAAA               CACCC CCTG GGGTT                TTAAGAAAGCTTTGT  48 26
CTRC46_03320  712694 ..  712710 -  -9.5  -3.14132   TCTTTTTCTCATCAA              CCTTTGT TTG ACAAAGG              TTGTTTCTTAGTAAA  74 33
CTRC46_03315  711721 ..  711747 - -10.1   -5.9873   CCAGCATAAAAAAAA         GAGACGCCCAC GTTCT GTGGGCTCCTC         TTCCAAAGTCTTCTG 100 65
        rpsD  709667 ..  709684 - -12.7  -5.86061   CTTTATGAAAAAAAA             GCCTCGC AAAA GCGAGGC              TTCAAAGAACATATA 100 59
CTRC46_03295  706950 ..  706988 - -14.8  -4.16307   CTTGGAAGAAAAAGA   TGTCCTAAGAGACTAGCT TAC AGCTAGTTTCTTAGGATA   GACTGATGCCCTTTC 100 10
CTRC46_03285  705375 ..  705402 - -14.2  -5.83226   AAGGCAATAAAAAAA        GCCCACACCC GTTATTTT GGGTGTGGGC         TCTTAAAAGACTATC 100 51
CTRC46_03280  703307 ..  703335 - -17.7  -5.79595   TTTGAAAAGAAAAAA        GAGCCAAAAAAGA AAT TCTTTTTTGGCTC        CCCCTCAATTCACAA 100 55
CTRC46_03275  700585 ..  700614 - -12.4  -4.63044   AGTTAGACAAATAAA       GCAGCTTAAAAA TTTTTG TTTTTAAGCTGC        TTTCCCTCACGATTA 100 50
CTRC46_03265  694865 ..  694875 -  -5.4  -3.76224   CGTTTAGCCAGCAAA                 GTTC TAG GAAC                 CGTGAAATTCATGGG  61 466
CTRC46_03250 NONE
CTRC46_03245 NONE
CTRC46_03240 NONE
CTRC46_03235 NONE
CTRC46_03230 NONE
CTRC46_03225 NONE
CTRC46_03220  686666 ..  686693 - -14.3  -5.34381   AAATGGAAATAAAAA        GCCCAGAACAA GAGAAG TTGTTCTGGGC         TGACAGAAGCTGTCA 100 48
CTRC46_03205 NONE
CTRC46_03200  681920 ..  681934 -  -5.6  -3.90856   AACCCCCTAAGGAAA               CTGGCG AAA CCCCAG               AAGAAAATGCTATTC  66 487
CTRC46_03185  680380 ..  680390 -    -4  -2.94199   TATCTATCAAGCATA                 TTCT GGG AGAA                 GGAAGGGTTGTCGCT  47 6
CTRC46_03180  678633 ..  678644 -    -3  -4.30833   TAAATGATCAAGAAA                TTCT CCTC AGAA                 AAGAAAAAACCTTCC  58 71
CTRC46_03175  677413 ..  677425 -  -3.4  -4.06993   TTACAGATCAAAGAA                TTCG CCTTC CGAA                AAAGAAATAGCTGCT  57 495
CTRC46_03135 NONE
CTRC46_03130 NONE
CTRC46_03125  669710 ..  669725 -  -6.2   -3.4647   CGGAAGAGCTAAACA              GGTAAT CTCA ATTACC               TTCTAGACCAGGAAT  60 28
CTRC46_03120 NONE
        sdhA  667147 ..  667157 -  -2.6  -3.86822   GAACGCCTCTATAAA                 TATT CAA AATA                 AATGTCTCTTTCAAA  51 49
        sdhB  666352 ..  666362 -  -5.4  -4.69053   TACCATGGAATAAAA                 TTGC GAT GCAA                 TCTTCGAAACTTAAG  74 67
CTRC46_03105  663216 ..  663228 -  -2.7  -3.34043   CTCACGATGTCAGAA                CAACA ACG TATTG                AGACCGGAGATATTC  46 240
CTRC46_03055  648967 ..  648994 -    -7   -3.3164   AACTCAGCTTCAGAA        CCGTAGGCATCCT AAA AGGGC-CCTACGG        TTTTTCTTTACTCTG  64 33
        mutL NONE
CTRC46_03025  641863 ..  641896 - -10.6  -5.14949   AAGAAAATAAGAAAA     GCCG-TTTTTTTGTT AAAAA AACAAAAAAATCGGC     TTTTATATGAAATTA  93 38
CTRC46_03020 NONE
CTRC46_03015 NONE
CTRC46_03010  636743 ..  636770 -  -4.2  -3.18264   TCTCGGACTGATCAA        GATATGTGCAAAG AAA CCTAGC-CATATC        CCCTCCTGCTATTCT  50 34
CTRC46_03005 NONE
CTRC46_03000 NONE
CTRC46_02995 NONE
CTRC46_02990 NONE
CTRC46_02985  633216 ..  633229 -  -3.9  -4.00042   TCTCGTACTAAACAA               TTATC AAAA GATAA                TTTAAATATAAACAT  57 51
CTRC46_02980  632656 ..  632682 - -13.1  -6.30182   TGATACAAAAAAAAA         GAACTCCCTCC AAAAA AGAGGGAGTTC         TTCACACCACGTAAG 100 65
CTRC46_02900  615313 ..  615332 -  -2.8  -2.68088   TTTGAAATGCATAAT            GAAGCAAT AAAA AGCGCTTC             TCGTATATTGTATTC  41 523
CTRC46_02880  612723 ..  612747 - -12.9  -3.72695   AGGCTCTCTAGCAAA          CGAAGGCGGAG CTA CTCCACCTTCA          TTTCAAGAGAGATCT  95 88
        hisS NONE
        aspS NONE
CTRC46_02855  603177 ..  603187 -    -4  -3.03441   GACTATTCTGTAACA                 GATA CAT TATC                 GTCGTTTGCTTCAAT  47 2
CTRC46_02850  602664 ..  602682 - -14.6  -4.36914   CTCTTCTCTAGAAAA             GGCCGAGA AAT TCTCGGCC             TTAACATGATTCAAA 100 36
CTRC46_02840 NONE
CTRC46_02835 NONE
CTRC46_02830  599678 ..  599688 -  -5.4  -3.27279   AGAAAATCAAGAAAT                 TCCT TGG AGGA                 TTACAATCCTAAAAA  56 26
CTRC46_02825  599070 ..  599083 -  -3.9  -2.59431   TCCCCTTAGAAGTTA               CTTAA AGTT TTAAG                CGCAAAGCTCTTCTC  45 13
         lnt NONE
        lpxC NONE
        fabZ NONE
CTRC46_02805 NONE
         fmt  594109 ..  594121 -  -5.5   -3.8709   AAACCCTTCTAGAAA                GGCCT CTC AGACC                TAGAATAAAAAAATA  62 71
CTRC46_02795  593054 ..  593077 -   -14  -5.36441   TTTGTAGATAAAAAA          GGCTGTTTCT TTTT AGAAACAGCC           TTTTTCTTAAGAAAT 100 53
        rplC NONE
        rplD  591302 ..  591316 -  -2.8  -3.54771   TTGACAACATCATAA               GGATCT TTC ATATCC               TCGCTTCCCCTTTAA  49 37
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC  588780 ..  588799 -    -5   -2.5937   ACACACCCTTATAAC            CTGTCTGCA CTA CGCAG-CAG            CTGTTGAAGCAGCAC  49 15
        rplP NONE
CTRC46_02750 NONE
        rpsQ NONE
        rplN  587499 ..  587513 -  -4.2  -2.91695   CTTACCTTTAAATCA               CCTCGG GAG CCAAAG               AGCTAATCTTAACAA  49 3
        rplX NONE
        rplE NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rplO  584251 ..  584273 -  -2.8  -2.95668   AATGTAGCCATAAAC           TTTACCTAAA AGT TCTAGTTAAA           CAGCCTCGATAAGAC  43 21
        secY NONE
        rpsM NONE
CTRC46_02690 NONE
CTRC46_02685 NONE
        rplQ  580432 ..  580449 -  -7.1  -4.56775   AGTGTTTTCGAAAAA             TTAGCAT CACT ATGCTAA              AAATTCTATGATACA  79 17
CTRC46_02675 NONE
CTRC46_02670  578402 ..  578429 -   -12   -4.7373   CCATCTGAGCAAAAA        CGACGAGGACCC TAAA GAGTCCTCGCCA         CAGCTTTACAAGAAG 100 112
CTRC46_02665  577648 ..  577662 -  -2.8  -4.71426   GGGTTACTAACAAAA               TCAGGA ATC TCCCAA               AAGGCTTTACTATCA  65 38
        ruvC NONE
        ruvA NONE
         ndk  575799 ..  575829 - -17.6  -6.22802   TCCTATAAAAAAAAA       CACCCCCCTCTGCA CGG TGCAGAGGGGGGCT       TGCACAATCTCAAAA 100 44
CTRC46_02630 NONE
CTRC46_02625  571231 ..  571247 -  -6.5   -3.5553   AAAGAAACGGAAAGA              GAGGGAT TCG AACCCTC              GGTACCCTTTAAGGG  65 76
CTRC46_02620  570458 ..  570471 -  -3.1  -3.74519   AAGATTTTTATGAAA               TCCAG GGAA CTAGA                ATACCGCACTTGCTG  53 89
CTRC46_02615  568655 ..  568691 - -10.3  -5.63517   TTTTTAAATAAAAAA    TTAAAAGACCTGGAATA CTA TACTCCAGGTCTTTTTC    TTCTCAAGACTATAA 100 35
CTRC46_02610 NONE
CTRC46_02605 NONE
        coaE NONE
         rho  562635 ..  562645 -  -2.6  -3.21827   ATAAAAATTATCTAA                 TTTT GAC AAAA                 AACGGACCCATACCC  46 336
CTRC46_02585  561086 ..  561101 -  -3.2  -2.96237   CAAGGGCAAAAATAC              GCATGA AACC TCTTGC               TTGATAGAAGAATCA  45 102
CTRC46_02580 NONE
CTRC46_02575 NONE
CTRC46_02570  558946 ..  558962 -  -5.2  -3.54129   CACAGTCTCTTTAAA              TTCCTT GTTCT AAGGAA              GCCGGGATTGCATTT  56 18
        hemH  557997 ..  558012 -  -2.6  -2.52543   ATCCCGTCTAAGGCA              TTAGAA GCGG CTCTAA               AGAAGTTTCCTGTGG  41 2
CTRC46_02560  556438 ..  556458 -  -5.6  -2.82878   AAAAAAAATACCAAG            GTAAAATA TCTCT TATTTTAC            TCCCATCTACAGAGG  52 401
CTRC46_02545 NONE
CTRC46_02540 NONE
CTRC46_02535 NONE
CTRC46_02530  554087 ..  554108 - -11.7  -6.36459   TTTAAGAAAAAAAAA           GAGAGTTGA AAAT TCAACTCTC            TTTTAGAAAAAACTA 100 38
CTRC46_02525 NONE
CTRC46_02520 NONE
CTRC46_02515  548546 ..  548557 -  -4.4  -4.07568   CCCGGGCGGGGAAAA                GCTT TACA AAGC                 CCTTACCGAATTTGA  59 50
CTRC46_02495  543202 ..  543216 -  -5.7  -3.15249   GATATCCTTGATGAA               CCAGA TTTCT TCTGG               GAACATCCAGAAACT  55 512
CTRC46_02475  541383 ..  541410 -  -4.9   -4.2461   ATGCTCATGAAGAAA        CGATCTCCTTC AGCCAA GAAGAAGACCA         TATTTTAAGAGTGAT  66 185
CTRC46_02440  535627 ..  535639 -  -4.1  -3.43492   CTAGATTTATCAGAA                CAAGA GCA TCTCG                TTACTGTCATATGCA  52 225
        prfB NONE
CTRC46_02410 NONE
CTRC46_02405  530260 ..  530285 - -13.4  -3.25207   GCAAAGGAGAACAGA         CGAGCAGAAC AGATAA GTTCTGCTCG          TGAATGCCTAAGCCA 100 33
CTRC46_02395  525648 ..  525683 - -13.6  -3.37493   CCTGTAACATATGAA    TATTTAAGGGAAG-CTC TTC GAGTCTTCCCTTAAACA    TACACAGATACTGCG 100 19
CTRC46_02370  521425 ..  521436 -  -4.4  -3.55604   TTACGGAAGTAAAGA                CGAA CTTG TTCG                 CGCATTCAAAGAATT  55 209
CTRC46_02360  520137 ..  520166 -  -6.5  -4.03885   TTCTAAAAAAATCAA       CAGCAAACTGTTT CTCA AAACTGCTTACTG        AATAGGCGCTTCAGA  71 20
CTRC46_02355 NONE
CTRC46_02350 NONE
CTRC46_02345  513565 ..  513584 -  -5.7  -3.21772   AAGTTTTTTACAATA            GGAGAGA TTTTGT CCTCTCC             TCTACTCTGAGATGA  54 108
CTRC46_02340  512641 ..  512670 - -19.3  -6.09888   TTTCAACAAAAAAAA       GAGCCCCCTCCGG AATT CCGGAGGAGGCCC        AAGCTCTCCCCTGCT 100 67
        gltX  510776 ..  510805 -  -6.4  -4.11751   ATGAACCCCCGAAAA       GGGAGTACATCT TAGCCC AGAAGTGCTCCC        CTCTTTTCAAACACG  69 141
CTRC46_02325  510029 ..  510062 - -18.5  -3.59979   TCTTGTTAGCCGAAA     TAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTA      CATCTGTTGTGGGTA 100 60
CTRC46_02320  508240 ..  508263 -   -16   -5.9218   TAGATAACAAAAAAA          GCCGCCCAGG AATC CCTGGACGGC           ACCTACACATCGATA 100 51
CTRC46_02315  507557 ..  507583 - -12.3  -2.62958   CAGCTCAATAAAATC         TGGGAGGAGGA CTCTT TCCTCCTCCCT         TTCCATACATCATCT  85 101
        rpsL NONE
CTRC46_02295 NONE
CTRC46_02290 NONE
        rpsJ NONE
CTRC46_02280  500191 ..  500204 -  -4.5  -3.36327   GTAGTCTATCTACAA               GAAGC TGTC GCCTC                TTTAAAACCTACACA  53 254
CTRC46_02265  498923 ..  498935 -  -4.1  -5.24416   TAACTACAAGAAAAA                GAAAC GAT GCTTC                CAAGACCATTACCAA  76 103
CTRC46_02260 NONE
CTRC46_02255 NONE
        dapF  495812 ..  495823 -    -3  -2.64616   TTTTGAGGTACAGGA                TATG TCGT CATA                 GGCTCCAGTATAGGG  41 85
CTRC46_02245  494372 ..  494383 -  -2.2  -4.47485   AAAAATGCTAGAAAA                CGTC CAAA AACG                 CCACCCCTCAGCTCC  60 475
        rplU NONE
        rpmA  485317 ..  485348 -  -6.7  -6.08342   GAACAAACAAAAAAA      GCCCTATTTTTAC GCGTAG GCAAAAACAGAGC       TTGAACAAACTGAAT 100 57
        obgE  483889 ..  483910 -  -9.5  -3.01712   TTCTTTTTGGCAATA           TCTTATGGG TCAC CCCACAAGA            TCTTTATTTCCTTGG  73 398
CTRC46_02115 NONE
CTRC46_02110 NONE
CTRC46_02105  458651 ..  458668 -  -7.1  -4.99972   ATAAAACATTAAAAA             TCAAGTT TCAA AACTTGA              ATCATAAAAGATTTC  83 27
        lpxK NONE
CTRC46_02095  456127 ..  456148 - -10.9  -4.91429   AAACCTTAAAGAAAA           CGAAGAGAG AAAA CCCTCTTCG            TTAAAAGATCTCTAA  93 37
CTRC46_02090 NONE
CTRC46_02085  453510 ..  453529 - -12.2  -2.50016   CTTTAGGAGTAAGAG            CTGCTAGG GAAA CCTAGCAG             ACTTGTAAACCCCAT  85 226
CTRC46_02050  442707 ..  442724 -  -4.1  -3.08754   CTTAAAAGAAAATAT             TCCTCTG ATCA CAGATGA              CTCTTCCCTTGTTAT  49 311
CTRC46_02030  438740 ..  438754 -  -2.1  -5.28942   TACTGGAAAGAAAAA              GT-GGC CCAC GCCTAC               GAGATCAACCTCAAA  75 210
CTRC46_02020 NONE
CTRC46_02015  435304 ..  435351 -  -4.4  -4.89852   CGATACTCACAAAAA CGC-ATTCGTTGT-TGGATGGA ATTAGA TCCATCCACACAACACATAACG AGCAGATATACTATG  73 36
CTRC46_02010  433702 ..  433717 -  -3.2  -4.67168   AAAAATCTTGAAAAA              CCAGCG CGGC CACTAG               CTATTGATCCCTATT  64 36
CTRC46_02000  432573 ..  432601 - -14.7  -5.63103   TTTCAATGAAAAAAA        CGCCCTCTTCTCT TGA AGAGAAGAGAACG        TTTAATGATGCTATT 100 36
CTRC46_01995 NONE
CTRC46_01990  430771 ..  430782 -    -3  -3.28791   ATGTTTCTTCCATAA                TAAG GCCT CTTA                 ATCGTTTTCTAAAAT  46 40
CTRC46_01985 NONE
CTRC46_01980 NONE
         pgi  426884 ..  426896 -  -2.7  -3.61889   TAAAAACTCTGCAAA                CAAAA AAA CTTTG                CCTGGCCGTCTCCGT  49 51
CTRC46_01970  426621 ..  426646 - -13.5  -5.75342   TTTTGGCAAAAAAAA         GCTCATCTATT TTTC AATAGATGAGC          CGACTTTAACTGATA 100 46
CTRC46_01965  425109 ..  425121 -  -3.4  -3.48276   TGGTTGCTGATACAA                CAAG AAATA CTTG                TATATTGGGAGCAAC  49 401
CTRC46_01910  412410 ..  412427 -  -4.9  -4.26292   AACAGGAAAAGCAAA             GCAAATT CGCA AACTTGC              TCTTTTTCCTAATTT  66 82
CTRC46_01905 NONE
CTRC46_01900 NONE
CTRC46_01895 NONE
CTRC46_01890  408253 ..  408288 - -12.1  -5.08178   ATATAGACACAAAAA    CCCTTTATTACCTCT GTAAAA AGACGTAATAAAGGG     CACAGTTCATCTCAT 100 111
CTRC46_01885 NONE
CTRC46_01880 NONE
CTRC46_01875  406498 ..  406510 -  -9.1  -3.40403   GTCTCCTCACTAGAA                CGCCA GTC TGGCG                TCATCTTTATAGAAG  71 259
CTRC46_01860  405577 ..  405593 -  -8.1  -2.52676   GAGTGGTCGAATGCA              TCTGATT CGA AATCAGA              AGTCCCTCAACGGGG  64 85
CTRC46_01855  403149 ..  403165 -  -3.8  -4.10672   TCAAGCCAAAGGAAA              CAAAAA TGTAT TTTTTG              GGAATTTTTTCACTT  59 81
CTRC46_01850 NONE
        ksgA  400921 ..  400935 -  -2.8  -3.74519   AAGAGTGCTATGAAA               TCCAAG ACA CCTAGA               GCAGACATTGTGATG  51 96
         def  400086 ..  400115 -  -5.1  -3.58522   ACTAGCACCCCTAAA       CACGCCATTCCTAT GCC ATAGCA-TGGCGTA       AGTATAAGCGAAGCG  57 96
        secG  399658 ..  399684 - -10.3  -6.17268   GGATAACAAAAAAAA         CCAAACTAGTT TGTCC AACCAGTTTGG         TTTTTTTTCTTATCG 100 63
CTRC46_01800  391336 ..  391359 -  -5.3  -4.40358   AGCTATCTGATAAAA          GGAGATCTT TCGTAC AAGCTCTCC           TTCTTGTGAAAGCTT  69 82
CTRC46_01785  387294 ..  387308 -  -2.7  -3.67597   GTTTTTATTTAATAA               CGCGC GCCTA GCTCG               AACGCACAAGAGACC  49 171
        rpsU NONE
CTRC46_01775 NONE
CTRC46_01770  383748 ..  383773 -  -9.8  -5.75342   CTGTTCTAAAAAAAA         GCGCTCCT-GT TTATC ACTAGGAGCGC         TTTTTGTTGGAAATG 100 54
CTRC46_01760 NONE
CTRC46_01755 NONE
CTRC46_01750 NONE
CTRC46_01745  379142 ..  379154 -  -4.1  -3.90588   GATGTTCGAATTAAA                CCAGA TTG TCTAG                ATCCTGAAGATCCTG  57 145
CTRC46_01695  364322 ..  364342 -    -9  -4.59773   GCCCATGTCTAAAAA            GCCCTCTG TAGAC CAGAAGGC            TTGCTTTGACTTTGT  86 499
CTRC46_01685  363840 ..  363873 - -19.1  -5.81412   TCGAGTCAAAAAAAA     GCTCTTTGCTAGACC TTTA GGTCTAACAAAGAGC      TTTATCATCGTTCGC 100 63
CTRC46_01680  363509 ..  363527 -  -3.2  -2.57988   CAGCAGAATCAAGAC             TCAAATCT ATC AAATCTGA             AGAGGGACTGCTATC  43 16
CTRC46_01675  361695 ..  361737 - -11.4  -4.56775   ATCTGGCTCGAAAAA CCTAATGAGATAGCCAATGA TTC TCATTGGCTATCTCCTCCTG CTCACAAGACTACTT 100 466
CTRC46_01660 NONE
        infA  359716 ..  359727 -  -4.4  -2.77569   AAACAACCTTAACGA                TGTC TGTA GACA                 ACACGAGCCTTCGTC  48 7
CTRC46_01650  358140 ..  358161 - -12.3  -3.74345   AGCTACACACCCAAA           GGCAAGGCT TTTC AGCCTCGCC            AACACATCACTTAAT  90 41
        secE NONE
        nusG  357206 ..  357233 -  -3.6  -3.21696   TTATAAGAACATAGA        GAATAAG-AATAC ACA GAATTTCTTATTC        TTACTCACTTTCTTG  48 26
        rplK NONE
        rplA NONE
        rplJ NONE
        rplL  354855 ..  354884 -  -5.1  -3.89587   CCATTAAGAAAAAAC       CATTGC-AACAGAA ATA TTCCGTTTGCGATG       CCAAACACTAAAAGT  61 159
        rpoB NONE
CTRC46_01610  346633 ..  346654 -  -9.5  -3.12378   AACGATACTATTCAA           GGGGGTTATG ACT CAT-ACCCCC           TCTCTTTCTCTAGTT  74 55
CTRC46_01605 NONE
CTRC46_01600  345070 ..  345110 -  -6.3  -4.08216   TTAGCTCTTCTAAAA  GCAGCCTCCTCCTTT AGACTCTCAGA AAAAGAAGAAGCTGC  TCGTGGTGATGCCAT  69 88
CTRC46_01590  343639 ..  343654 -  -6.1  -6.02914   CGCATACAAAAAAAA              CTCCG AGTTTG CGGAG               CTTCCATCGTCAACG 100 91
CTRC46_01585 NONE
CTRC46_01580 NONE
CTRC46_01575 NONE
CTRC46_01570 NONE
CTRC46_01565 NONE
CTRC46_01560 NONE
CTRC46_01555 NONE
        valS  333216 ..  333257 -  -4.5  -2.61452   ATCAGCCTAATCAAT TCGTATCGTTGCAAAAGAA CAGC CTCTTTTAAAGCGATGCGA  GTTTATCTAAAATGC  47 12
        pknD  330390 ..  330413 -  -8.9  -4.75776   AATCTAAGCCAAAAA          GCCCTTTCC TTTATG AGAAAGGGC           TTTTTATTTCTTTAA  88 37
CTRC46_01525  326329 ..  326340 -  -2.2   -3.7791   GAATTAGTTAGGAAA                TCCC GCTG AGGA                 GAACCTAAGAATGAT  50 2
CTRC46_01520 NONE
CTRC46_01515  323621 ..  323637 -  -6.7  -2.60075   TTTTTTTTAACCAAT              CAATAAT AAA ATTATTG              CTTGCTCATTTCTAC  56 20
CTRC46_01510  322594 ..  322629 - -11.3  -2.74496   ATTTACAGAAAAATT    TCATAGAAGGCCCTC TTTTTG AAGAGCCTCCTATGA     TCTTTTATTCGTTAT  78 30
         dut NONE
CTRC46_01500 NONE
CTRC46_01495  321011 ..  321023 -  -4.1  -2.64705   GATAACTTAATGAAT                TTGAG CTT CCCAA                TTTTTAACAAAAGCT  45 4
CTRC46_01490  319718 ..  319752 - -13.1  -5.06735   CATAAATGACAAAAA     GAAAAAGGAGAGC TGTTGCTGT GCTCTCCTTTTTC     TCTAAATATTCCTGA 100 54
        mnmA  316649 ..  316659 -  -2.4  -4.12554   GAAAGAGAAGAAGAA                 GCTG TTT CTGC                 TTTAGCTATAGAAGG  55 58
CTRC46_01465 NONE
CTRC46_01460  311694 ..  311717 - -11.8  -3.26719   TGGACAAAGACCGAA          GAGAGGATCT GTAC AGATCCTCCC           TCCCTATTAGAAGAG  84 41
CTRC46_01455 NONE
CTRC46_01450  309071 ..  309087 -  -7.9    -2.924   CAAGGCTTCATAAAT              GGCGGTT AAT AGCCGCC              TTTGCTAGGGTTCTA  64 30
CTRC46_01425  304454 ..  304474 -  -8.3  -3.32727   GCAATATTACAGTAA            CTGGAAGAG TAT CTCTTCAAG            GAAGAGCTATGGTTA  69 122
        mraW NONE
CTRC46_01395 NONE
CTRC46_01390  297762 ..  297777 -  -5.4  -4.06185   CAGAGAAAGAGCAAA              GACAAG AGAA CTCGTC               TTTTTACTCTTTCAC  65 212
        murE NONE
CTRC46_01380  295467 ..  295482 -  -3.2  -3.68351   TTTCGAGCACTTAAA              GGTCTT GTTA AAGCCC               TCCCTCCCCCAGATT  51 39
CTRC46_01375  294906 ..  294937 -  -6.7  -2.67803   TCTTGAGGAAATTTA      GAGTCAAGCTT GCTTATGCTG AAGCCTGACTC       TACGATCGAAAGCAA  56 62
CTRC46_01370  293653 ..  293679 -  -2.4  -2.97408   TTTCACGCAAACAAT         TTTAATTTCTCT TAA AAAGAAATCAAG         CCTTTTCAAATAAAA  42 21
CTRC46_01365 NONE
CTRC46_01360  290261 ..  290283 -  -8.4  -2.70354   CTGTGGATAAATGCA           GGATTTGCCG GAG CAGCCAATCC           AAACATACCTCTTCT  63 404
CTRC46_01335 NONE
CTRC46_01330  285778 ..  285799 -  -8.8  -4.15453   CAACTCATGTTAAAA           CTTCTGGA TACTCC TCCAGAAG            TAGGCGCCTCTATCA  83 124
CTRC46_01315  282591 ..  282611 -  -6.7   -3.4252   CTTTATTTACGAGAA            GGTACGGCA TAT CGCCGCTCC            TGTGACCCTGCATAT  63 288
CTRC46_01300  279941 ..  279952 -    -3  -5.63103   CCCTAATCAAAAAAA                CTTT GCAG AAAG                 ACAAAACCTCTCCAA  80 249
CTRC46_01295  277445 ..  277461 -  -6.7   -3.6608   ACTATCTCAGCTAAA              TAGTTTT GAT AAAACTA              TTCTAATTAAAAAAC  65 67
CTRC46_01290  276026 ..  276050 -  -9.3  -3.31322   CCGAACGGTGTACAA         GGAGGC-GGC GCAATT GCCTGCCTCC          TACCTCTAGTCTTCT  75 31
CTRC46_01280  273027 ..  273045 - -11.8  -3.90588   TACTTCTCAATTAAA             GAAGGGAA TGT TTCCCTTC             TTTCTTCTAAGAAGT  90 32
CTRC46_01260  268054 ..  268064 -    -4  -3.86897   TGCAGGTTCTACAAA                 GATT GGC AATC                 ATGTAATTATCGGTG  57 273
CTRC46_01235 NONE
CTRC46_01230 NONE
        fabG  260222 ..  260243 -  -6.7  -5.90981   CTATAGCAAAAAAAA           TCTAGCTTT AAAT AAAACTAGA            GTAACCAATCCCTAC 100 256
        acpP  259817 ..  259847 - -12.6  -5.85737   AGATCAATAAAAAAA       CCCACAGTTACCTT TGG ATGGGAACTGTGGG       CCTAAACTCTTTGTT 100 50
CTRC46_01185  251606 ..  251620 -  -6.4  -4.04209   GCAAATCACTATAAA               TCCGCA ACA TGCAGA               ACTAAAGCGCCGTAA  71 89
CTRC46_01180  250913 ..  250931 -  -4.6  -3.13625   AAAGCAACATATAGA             CGTCTTTT GTG AAAAGACT             GAATAGAGGAATCTA  50 38
CTRC46_01175  250113 ..  250147 -  -2.9  -4.11625   AAAAGAAATATTAAA    CATGGC-GCCTCTATT TCGC AAAAAAGGCCGACATG     CTACAGGAAAGCTAA  55 140
CTRC46_01170 NONE
CTRC46_01165  249087 ..  249108 -  -7.4  -3.99481   GTTATCAAAAGAGAA           GCTTTTCT CTAAAT AGAAAAGC            GTATCGTCAACTCTT  72 68
CTRC46_01160  248598 ..  248611 -  -2.3  -2.82909   CAAACAGATAAATAC               CCCTA ATCA TTGGG                AAAAATTGAGTGTAG  41 14
CTRC46_01155  247368 ..  247387 - -12.2  -6.08563   AAGAGAGAAAAAAAA            GCCTCTTC ATAA GAAGAGGC             TTTTGCTCGGCAAAC 100 40
CTRC46_01150 NONE
CTRC46_01145  246663 ..  246675 -  -3.5  -3.23274   TTGTTCACAACGCAA                TTTTT TTC AAAAA                ATCCAATAAAGCCCT  48 57
CTRC46_01140  245505 ..  245541 -  -2.9  -4.82901   GTCCCCTTATAAAAA    GATGGGAGAACCCCC GCTAATG GGAGGTTCTCTTTTC    GTTGATTACTTCATG  65 5
CTRC46_01105 NONE
CTRC46_01100 NONE
CTRC46_01095 NONE
CTRC46_01090  235427 ..  235443 -  -3.7  -4.87291   CACCCGAAGGAAAAA              TCTTCCA AGC TGGAACA              CTTTCAGGAAATCCT  70 416
        leuS NONE
CTRC46_01075  230386 ..  230401 -  -5.4  -4.70613   AAAATTCTAAGAAAA              CAACAG GAAA CTGTCG               GTGAAAGCTAGAAGA  74 250
CTRC46_01010  215647 ..  215658 -  -4.4  -5.09245   CGAAAACGACAAAAA                GTCT TCCG AGAC                 TCTTAAACAAGAGTC  75 265
CTRC46_01005  214012 ..  214038 - -10.2  -5.14477   GACATAGTGAAAAAA         GCCCGAAGAAAA CCT TTGTCTTCGGAC         TCACCCACTATTTGA  93 33
CTRC46_01000  212747 ..  212763 -  -5.9  -3.60006   AAGTAGACGGCGAAA              GAGTTTA TAC TAAACCC              GATAAAAACACAAAA  62 63
CTRC46_00995  211883 ..  211899 -  -4.4  -2.90901   ATATGCGCAAGCACA              CCTTCC TTCGC AGAAGG              CTCAGGAAGAAGGCT  49 128
CTRC46_00990 NONE
        gyrB NONE
CTRC46_00980 NONE
         tmk NONE
CTRC46_00970  205053 ..  205067 -  -2.9  -3.59979   CCGGCCGATTGTAAA               TTAGA GATGT TCTAA               CTTCTTCTTCGATTA  49 22
CTRC46_00940  198737 ..  198759 -    -5  -2.87003   ATTATCAAAAATGGA           TTTTTTCTGT GCG AAAGAAAAAA           ATCTATAAAGATACA  50 28
CTRC46_00935  197677 ..  197692 -  -4.7  -3.55563   ATTTCACCCTGTAAA              GAGAG CTTTTC CTCTC               TTGAAAGCTTATGTA  57 95
CTRC46_00930 NONE
CTRC46_00920 NONE
CTRC46_00915  194609 ..  194643 -    -3   -3.0395   ATAGACGTCCCAAGA     TAGCAACGAGAT GTATTATTTTG ATTTCGTTGCTA     ACACAAGCAGACAAG  43 6
CTRC46_00905 NONE
CTRC46_00900  191702 ..  191735 - -13.3  -3.39717   ATTTATGAATATGAA     TATGAAGCCCAGGCA TCGA TATCTGGGCTTCATA      GTTGTCTGTATAGAT 100 168
CTRC46_00860  185815 ..  185828 -  -5.9  -3.53012   CGTTGTTCTTGGAAA               GCGAC CTTA GCCGC                GTTTCGCGTTTTAAC  60 97
CTRC46_00855 NONE
CTRC46_00850  184494 ..  184516 -  -9.2  -4.04206   CTATTGTGAGAGAAA           GAGGCAGA GGGATGG TCTGCCTC           CGAGAGAACTTAGAA  82 67
CTRC46_00845  184014 ..  184026 -  -9.1  -3.04322   CGTAAGGGTCTAATA                CAGCC TAA GGCTG                TTGAGGCGCTGGAGG  69 17
CTRC46_00835  182722 ..  182732 -  -2.6  -3.89033   CCTAAATAAGAAAGA                 TTAT AAG ATAA                 TTGTCTTTTTTTTCT  53 90
CTRC46_00830 NONE
CTRC46_00825  179974 ..  179988 -  -5.6  -3.28712   GCTTTCCTCTGAGAA               GGCAGG AAA CTTGCC               TTCTCTTTCGACTAC  56 54
CTRC46_00820  179178 ..  179201 -  -3.9  -2.90615   ACTGTTTGGAAATCA          GCCAACATA GTTTTT TATGTTGGA           GGGTTCTTCCGTTAG  47 272
CTRC46_00805  175646 ..  175678 - -14.9  -4.17023   GGAACTAGCTGAAAA      GTGCCACCGAGAAGA GAT TCTCCGCGATGGCAC      CTTAATGCAGCGACA 100 195
CTRC46_00785  171927 ..  171948 - -14.5   -4.7033   TAATGGAAGAGAAAA           GAGAGGCTG AACC CAGCCTCTC            TACGAAAACAAACTA 100 41
CTRC46_00780  170184 ..  170203 -  -5.7  -6.01369   GAAAGAATAAAAAAA            GGAGGGCT GCTAA AGCCC-CC            TTTTTAGTTAGGATA 100 63
CTRC46_00730  155714 ..  155728 -  -2.1  -4.82667   GGAGGATATTAAAAA               GCATA TCGCT CATGC               CCAAGAGTTAGGGAT  66 257
CTRC46_00700  150510 ..  150522 -  -3.5  -3.93817   CAGATCTTAAAAAGA                TTTTA AAC TAAAA                AGAAGATTTTTTAAT  55 56
CTRC46_00695 NONE
CTRC46_00690  145787 ..  145799 -  -6.3  -2.87003   CGATGAATAAGATTA                TTCTG TTT CAGAA                ACTTCCCACGGAAGA  54 10
         adk  143431 ..  143454 -    -9  -3.61175   GAGACATCACAAAGA          GGACTAAAAA GAGG TTCTTAGTCC           TTGTTGAACGCGACT  74 67
CTRC46_00670  142541 ..  142560 - -10.8  -4.36914   GTGCGTTTCAGAAAA            GCCTTCTT TCAA AAGAAGGC             TTTTCTATTTTTAGG  90 14
CTRC46_00655  140995 ..  141009 -  -2.8  -4.91712   GCTAAGGGAGAAAAA               CTGCCT TGG AAGCAA               AAGAATATAGAGTTT  70 468
CTRC46_00630 NONE
CTRC46_00625  136920 ..  136937 - -11.3  -4.72272   TTCGCGTAGGAAAAA             GAGGAGG GAGA CCTCCTC              TTTTTTTTTATTTTG  91 442
CTRC46_00590 NONE
CTRC46_00585  128544 ..  128560 -  -3.7  -3.60214   ATTTGAACGATAGAA              CGTTC AGAGGAA GAACG              ATAGCAAAGTCCTTG  53 94
       groES NONE
       groEL  126419 ..  126444 - -11.2  -6.15259   GAATCTAAAAAAAAA         GCCTCGTTCC TTTTGG GAAACGAGGC          TCGAAGAATCTATTT 100 57
CTRC46_00570  125194 ..  125205 -  -5.8  -3.09516   TTCTTTAGGAGTTAA                GGGA GTCT TCCC                 AGAAATGGAGGTTCA  55 378
CTRC46_00555  122588 ..  122607 -  -2.8  -3.54919   AAGCAGGTGTGCAAA            GCTCTTCT ATCT AGAAGTAC             TTTTATTCCCTAGTA  49 90
CTRC46_00540  119058 ..  119106 -  -3.5  -3.35197   GGTGAGAGAGAGGAA GTGAAGAAAATTATGGATAGATT TATTC AATCT--CCAGAAGTTTCTTCAC AGGTAACCATGAATT  49 341
CTRC46_00525  117331 ..  117354 -  -6.6  -2.91239   TAGAGACTCTAGACA          GCCTCAGGTA GTTG TTCCAGAGGC           CCTATTATGTTCTCT  58 114
        rpsA  114005 ..  114024 -   -10  -2.55818   AATAATGCTAACGGA            GCAGAGCC CTAG AGCTCTGC             TCTTATGTTTGCTCT  73 69
        nusA NONE
        infB NONE
        rbfA NONE
        truB NONE
CTRC46_00485  107616 ..  107646 -    -4  -4.08767   CCTATCTGTGTAAAA       TTAGAGGAAGAAAT TCT ATCGCTCCCTCTAG       AGGAACGACAAGATT  61 375
CTRC46_00475 NONE
CTRC46_00470 NONE
CTRC46_00465 NONE
CTRC46_00460 NONE
CTRC46_00455 NONE
        rpmB   99614 ..   99646 -  -7.7  -3.05993   TCAGGGATAGATACA      CGCATGCTGAGGGAA AAT CTTTCTCAGCATGCA      CATAGGAGACTAAAA  65 35
CTRC46_00445   97807 ..   97817 -  -3.2  -3.62096   GGTTATTATGGGAAA                 TAGC TAT GCCA                 GCGAGAAGAAACAAG  51 5
CTRC46_00440   96493 ..   96522 -  -5.8  -2.62933   GAATCTTGGAGATGA       CGTTGTCACTAT TCCAAC ATAAAGACAACG        AATAATCTTGCAATC  54 44
CTRC46_00420 NONE
CTRC46_00415 NONE
CTRC46_00410   90758 ..   90768 -  -5.4  -4.21322   GGAACAGAAATTAAA                 TCTC TGC GAGA                 TCATGGTGGAAATTT  65 346
CTRC46_00400 NONE
        recF   88140 ..   88159 -  -5.1  -4.78266   AAATAAAACAACAAA            GTTTGTT TCAATT AACAAAC             AGTTTTTGCGAAGGA  72 45
CTRC46_00390   86657 ..   86669 -  -2.6  -3.90464   CTCGAAAGAATAGAA                GCCG AAAAA CAGC                GGATTTCTTTAGGCA  53 400
CTRC46_00355   78420 ..   78446 -  -6.7  -4.57569   GTATTTCTTTAAAAA         GTCGTGAAA AAATTTTGA TTTCACGAC         TCCCTATTTCGGCTG  77 264
CTRC46_00345   76694 ..   76717 - -11.7  -5.26907   GAACACAAAAGAAAA          GCCCCGTCC GAGATA GAACGGGGC           TTCTTTTTAGAGAAT 100 56
CTRC46_00340   74702 ..   74722 -  -9.7  -4.27842   AGCATAAAACAAGAA            GGCCCAGTA AAC TACTGGGTC            TTTTTTATGAAGCAA  86 57
CTRC46_00315   68708 ..   68718 -    -4  -3.89346   TCCGGAGGCTAGAAA                 GTTA TCT TAAC                 GCAGCCACCTTTAAT  57 8
CTRC46_00310   67486 ..   67523 - -13.7  -3.26947   TAAGCTTTAGATCAA   TTTAAAGGAAGGTCTCC ATGG AGAAACCTCCCTTTAAA    AATTGTTTATAAATT 100 32
CTRC46_00305 NONE
CTRC46_00300   64732 ..   64748 -  -6.5  -3.74792   GATTATAGACGGAAA              GGAAGCC GTA GGATTCC              TTGTGAATGTTAAAG  65 107
CTRC46_00285 NONE
CTRC46_00280 NONE
CTRC46_00275   58760 ..   58794 -  -5.8  -3.25823   GTGTTCCCATATTAA     TGTTCCCAGTCATG CTTCCTC CATGAATGGGAAGA     TAATCTGGATTTGGG  58 322
CTRC46_00225   47966 ..   47994 - -15.5  -3.34398   GGGGGGGCTTAAACA        CAAAAGGAAGAGA GAC CCTCTTCCTTTTG        TTGTATGATAGCAAA 100 45
CTRC46_00220   45864 ..   45887 -   -11  -4.72272   GCTTGGTAGCAAAAA          GACCCATCTC TAAT GAGCTGGGTC           TTTTTTTATCTAGAT  91 31
         dcd   43171 ..   43184 -  -3.1  -3.25202   TAGGGTTAAACAAAC               GGAAT AGTA ATCCC                TTGTTGTTTTTGATA  48 2
CTRC46_00195   42424 ..   42434 -  -6.8  -2.85351   GCCTCGGACAGTATA                 CTCC CTT GGAG                 CTTTTTTAGCATTTG  57 386
CTRC46_00190   40902 ..   40914 -  -2.7  -3.78934   GGCGCGCTATAATAA                TCTTC TTG GAAAA                CCTGCAGCTATTCTC  52 203
CTRC46_00180   38876 ..   38888 -  -2.7  -4.67011   AAGTCCATGGAAAAA                TGAAA CTT TCTCA                GAATGTTTTTAGAGG  62 128
CTRC46_00175   36394 ..   36419 -  -8.3   -4.0641   CTTCACGGAGAGAAA         GAGGGGTTTCA TTTA TAGAACCCCTC          TTTTTTTTGTGCAAA  79 109
CTRC46_00115 NONE
CTRC46_00110   24570 ..   24590 -    -4  -5.53991   CATTGAGCAAAAAAA            GAGGTCTT ATTAA AAGATCTC            TTTTTTTTGCTCTTA  83 38
CTRC46_00100   19870 ..   19893 - -12.6  -2.76046   GCAAGTTCAATAGGA          GTCTTGTTAC TTAG GTAACAAGAC           TCTTCTTCTTTTTTC  90 48
CTRC46_00085   15749 ..   15760 -  -4.4  -4.42386   CTGTTATGCAGAAAA                GAGA GCGG TCTC                 TATTGGTAAATACGG  66 391
CTRC46_00070 NONE
CTRC46_00065 NONE
CTRC46_00060    9699 ..    9710 -    -3  -4.25056   CATGGGAGGAAGAAA                TTCT CCTG AGAA                 AGCGATCCGTAGTTG  61 109
CTRC46_00050    8073 ..    8090 -  -4.1  -4.46212   TTGGCCAGGACAAAA             CCTCAAA ATGT TTGGAGG              CTATTCCGTAGGGAA  66 153
CTRC46_00035    6295 ..    6307 -  -3.4  -4.35042   TCTAGTATAAAATAA                CCAA AGAGA TTGG                AGGGAGATAATTTTT  60 87
CTRC46_00030    5086 ..    5117 - -14.6  -4.03183   AGGCATAAAAGAGAA      GAACCCTCTTCATA AAAC TATGGAGAGGGTTC       TCTTTTTAAAAGGCT 100 58
CTRC46_00010    1209 ..    1247 -  -9.6  -5.14563   GTTTGTATCAAAAAA   CTAAGCCCACCAAGAAGA AAT TCTCTTTGGTGGGCTTCT   TTTTTTATTCAAAAA   0 99
