SOTONE4_00004	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
SOTONE4_00029	PWY-6829	tRNA methylation (yeast)
SOTONE4_00029	PWY-7285	methylwyosine biosynthesis
SOTONE4_00029	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
SOTONE4_00032	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00042	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00048	PWY-5988	wound-induced proteolysis I
SOTONE4_00048	PWY-6018	seed germination protein turnover
SOTONE4_00057	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SOTONE4_00058	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SOTONE4_00060	PWY-7560	methylerythritol phosphate pathway II
SOTONE4_00075	PWY-7560	methylerythritol phosphate pathway II
SOTONE4_00082	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
SOTONE4_00082	PWY-2201	folate transformations I
SOTONE4_00082	PWY-3841	folate transformations II
SOTONE4_00082	PWY-5030	L-histidine degradation III
SOTONE4_00082	PWY-5497	purine nucleobases degradation II (anaerobic)
SOTONE4_00082	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
SOTONE4_00089	PWY-5941	glycogen degradation II (eukaryotic)
SOTONE4_00089	PWY-6724	starch degradation II
SOTONE4_00089	PWY-6737	starch degradation V
SOTONE4_00089	PWY-7238	sucrose biosynthesis II
SOTONE4_00095	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
SOTONE4_00095	PWY-6167	flavin biosynthesis II (archaea)
SOTONE4_00095	PWY-6168	flavin biosynthesis III (fungi)
SOTONE4_00102	PWY-6012	acyl carrier protein metabolism I
SOTONE4_00102	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
SOTONE4_00110	PWY-5663	tetrahydrobiopterin biosynthesis I
SOTONE4_00110	PWY-5664	tetrahydrobiopterin biosynthesis II
SOTONE4_00110	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SOTONE4_00110	PWY-6703	preQ<sub>0</sub> biosynthesis
SOTONE4_00110	PWY-6983	tetrahydrobiopterin biosynthesis III
SOTONE4_00110	PWY-7442	drosopterin and aurodrosopterin biosynthesis
SOTONE4_00123	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SOTONE4_00123	PWY-5723	Rubisco shunt
SOTONE4_00130	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00140	PWY-7533	gliotoxin biosynthesis
SOTONE4_00186	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SOTONE4_00186	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
SOTONE4_00187	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SOTONE4_00187	PWY-7177	UTP and CTP dephosphorylation II
SOTONE4_00187	PWY-7185	UTP and CTP dephosphorylation I
SOTONE4_00189	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
SOTONE4_00190	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SOTONE4_00190	PWY-6855	chitin degradation I (archaea)
SOTONE4_00190	PWY-6906	chitin derivatives degradation
SOTONE4_00192	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SOTONE4_00192	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SOTONE4_00192	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00192	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SOTONE4_00192	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SOTONE4_00192	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SOTONE4_00197	PWY-6700	queuosine biosynthesis
SOTONE4_00209	PWY-1042	glycolysis IV (plant cytosol)
SOTONE4_00209	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SOTONE4_00209	PWY-5484	glycolysis II (from fructose 6-phosphate)
SOTONE4_00209	PWY-7385	1,3-propanediol biosynthesis (engineered)
SOTONE4_00211	PWY-1042	glycolysis IV (plant cytosol)
SOTONE4_00211	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SOTONE4_00211	PWY-5484	glycolysis II (from fructose 6-phosphate)
SOTONE4_00211	PWY-7385	1,3-propanediol biosynthesis (engineered)
SOTONE4_00216	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SOTONE4_00219	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SOTONE4_00219	PWY-5723	Rubisco shunt
SOTONE4_00224	PWY-5381	pyridine nucleotide cycling (plants)
SOTONE4_00224	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
SOTONE4_00224	PWY-6596	adenosine nucleotides degradation I
SOTONE4_00224	PWY-6606	guanosine nucleotides degradation II
SOTONE4_00224	PWY-6607	guanosine nucleotides degradation I
SOTONE4_00224	PWY-6608	guanosine nucleotides degradation III
SOTONE4_00224	PWY-7185	UTP and CTP dephosphorylation I
SOTONE4_00245	PWY-5367	petroselinate biosynthesis
SOTONE4_00245	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SOTONE4_00245	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SOTONE4_00245	PWY-5989	stearate biosynthesis II (bacteria and plants)
SOTONE4_00245	PWY-5994	palmitate biosynthesis I (animals and fungi)
SOTONE4_00245	PWY-6113	superpathway of mycolate biosynthesis
SOTONE4_00245	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SOTONE4_00245	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SOTONE4_00245	PWY-6951	SOTONE4_00245|SOTONE4_00245|YP_007734646.1|GeneID:15123696
SOTONE4_00245	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
SOTONE4_00245	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SOTONE4_00245	PWYG-321	mycolate biosynthesis
SOTONE4_00246	PWY-4381	fatty acid biosynthesis initiation I
SOTONE4_00246	PWY-6799	fatty acid biosynthesis (plant mitochondria)
SOTONE4_00246	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SOTONE4_00247	PWY-4381	fatty acid biosynthesis initiation I
SOTONE4_00256	PWY-5941	glycogen degradation II (eukaryotic)
SOTONE4_00256	PWY-622	starch biosynthesis
SOTONE4_00256	PWY-6731	starch degradation III
SOTONE4_00256	PWY-6737	starch degradation V
SOTONE4_00256	PWY-7238	sucrose biosynthesis II
SOTONE4_00266	PWY-6823	molybdenum cofactor biosynthesis
SOTONE4_00266	PWY-6891	thiazole biosynthesis II (Bacillus)
SOTONE4_00266	PWY-6892	thiazole biosynthesis I (E. coli)
SOTONE4_00266	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SOTONE4_00273	PWY-4381	fatty acid biosynthesis initiation I
SOTONE4_00273	PWY-5743	3-hydroxypropanoate cycle
SOTONE4_00273	PWY-5744	glyoxylate assimilation
SOTONE4_00273	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SOTONE4_00273	PWY-6679	jadomycin biosynthesis
SOTONE4_00273	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SOTONE4_00293	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SOTONE4_00293	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SOTONE4_00300	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SOTONE4_00300	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SOTONE4_00300	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00300	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
SOTONE4_00301	PWY-4381	fatty acid biosynthesis initiation I
SOTONE4_00301	PWY-5743	3-hydroxypropanoate cycle
SOTONE4_00301	PWY-5744	glyoxylate assimilation
SOTONE4_00301	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
SOTONE4_00301	PWY-6679	jadomycin biosynthesis
SOTONE4_00301	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SOTONE4_00302	PWY-6854	ethylene biosynthesis III (microbes)
SOTONE4_00303	PWY-6749	CMP-legionaminate biosynthesis I
SOTONE4_00307	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SOTONE4_00307	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SOTONE4_00315	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00316	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00321	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SOTONE4_00321	PWY-5723	Rubisco shunt
SOTONE4_00342	PWY-1042	glycolysis IV (plant cytosol)
SOTONE4_00342	PWY-5484	glycolysis II (from fructose 6-phosphate)
SOTONE4_00342	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SOTONE4_00342	PWY-7003	glycerol degradation to butanol
SOTONE4_00346	PWY-6891	thiazole biosynthesis II (Bacillus)
SOTONE4_00346	PWY-6892	thiazole biosynthesis I (E. coli)
SOTONE4_00346	PWY-7560	methylerythritol phosphate pathway II
SOTONE4_00347	PWY-1042	glycolysis IV (plant cytosol)
SOTONE4_00347	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SOTONE4_00347	PWY-5484	glycolysis II (from fructose 6-phosphate)
SOTONE4_00347	PWY-5723	Rubisco shunt
SOTONE4_00347	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SOTONE4_00347	PWY-6886	1-butanol autotrophic biosynthesis
SOTONE4_00347	PWY-6901	superpathway of glucose and xylose degradation
SOTONE4_00347	PWY-7003	glycerol degradation to butanol
SOTONE4_00347	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SOTONE4_00347	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SOTONE4_00380	PWY-2941	L-lysine biosynthesis II
SOTONE4_00380	PWY-2942	L-lysine biosynthesis III
SOTONE4_00380	PWY-5097	L-lysine biosynthesis VI
SOTONE4_00381	PWY-2941	L-lysine biosynthesis II
SOTONE4_00381	PWY-2942	L-lysine biosynthesis III
SOTONE4_00381	PWY-5097	L-lysine biosynthesis VI
SOTONE4_00381	PWY-6559	spermidine biosynthesis II
SOTONE4_00381	PWY-6562	norspermidine biosynthesis
SOTONE4_00381	PWY-7153	grixazone biosynthesis
SOTONE4_00382	PWY-2941	L-lysine biosynthesis II
SOTONE4_00382	PWY-2942	L-lysine biosynthesis III
SOTONE4_00382	PWY-5097	L-lysine biosynthesis VI
SOTONE4_00382	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
SOTONE4_00382	PWY-6559	spermidine biosynthesis II
SOTONE4_00382	PWY-6562	norspermidine biosynthesis
SOTONE4_00382	PWY-7153	grixazone biosynthesis
SOTONE4_00382	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
SOTONE4_00383	PWY-2941	L-lysine biosynthesis II
SOTONE4_00383	PWY-2942	L-lysine biosynthesis III
SOTONE4_00383	PWY-5097	L-lysine biosynthesis VI
SOTONE4_00385	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SOTONE4_00386	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SOTONE4_00387	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SOTONE4_00388	PWY-6164	3-dehydroquinate biosynthesis I
SOTONE4_00389	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
SOTONE4_00389	PWY-6416	quinate degradation II
SOTONE4_00389	PWY-6707	gallate biosynthesis
SOTONE4_00392	PWY-40	putrescine biosynthesis I
SOTONE4_00392	PWY-43	putrescine biosynthesis II
SOTONE4_00392	PWY-6305	putrescine biosynthesis IV
SOTONE4_00392	PWY-6834	spermidine biosynthesis III
SOTONE4_00395	PWY-1622	formaldehyde assimilation I (serine pathway)
SOTONE4_00395	PWY-5392	reductive TCA cycle II
SOTONE4_00395	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SOTONE4_00395	PWY-5690	TCA cycle II (plants and fungi)
SOTONE4_00395	PWY-5913	TCA cycle VI (obligate autotrophs)
SOTONE4_00395	PWY-6728	methylaspartate cycle
SOTONE4_00395	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SOTONE4_00395	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SOTONE4_00395	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SOTONE4_00397	PWY-3801	sucrose degradation II (sucrose synthase)
SOTONE4_00397	PWY-5054	sorbitol biosynthesis I
SOTONE4_00397	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
SOTONE4_00397	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
SOTONE4_00397	PWY-5659	GDP-mannose biosynthesis
SOTONE4_00397	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SOTONE4_00397	PWY-621	sucrose degradation III (sucrose invertase)
SOTONE4_00397	PWY-622	starch biosynthesis
SOTONE4_00397	PWY-6531	mannitol cycle
SOTONE4_00397	PWY-6981	chitin biosynthesis
SOTONE4_00397	PWY-7238	sucrose biosynthesis II
SOTONE4_00397	PWY-7347	sucrose biosynthesis III
SOTONE4_00397	PWY-7385	1,3-propanediol biosynthesis (engineered)
SOTONE4_00401	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SOTONE4_00401	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
SOTONE4_00401	PWY-6164	3-dehydroquinate biosynthesis I
SOTONE4_00410	PWY-5097	L-lysine biosynthesis VI
SOTONE4_00425	PWY-6167	flavin biosynthesis II (archaea)
SOTONE4_00425	PWY-6168	flavin biosynthesis III (fungi)
SOTONE4_00425	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00450	PWY-5198	factor 420 biosynthesis
SOTONE4_00452	PWY-5839	menaquinol-7 biosynthesis
SOTONE4_00452	PWY-5844	menaquinol-9 biosynthesis
SOTONE4_00452	PWY-5849	menaquinol-6 biosynthesis
SOTONE4_00452	PWY-5890	menaquinol-10 biosynthesis
SOTONE4_00452	PWY-5891	menaquinol-11 biosynthesis
SOTONE4_00452	PWY-5892	menaquinol-12 biosynthesis
SOTONE4_00452	PWY-5895	menaquinol-13 biosynthesis
SOTONE4_00454	PWY-2941	L-lysine biosynthesis II
SOTONE4_00454	PWY-5097	L-lysine biosynthesis VI
SOTONE4_00456	PWY-1622	formaldehyde assimilation I (serine pathway)
SOTONE4_00456	PWY-181	photorespiration
SOTONE4_00456	PWY-2161	folate polyglutamylation
SOTONE4_00456	PWY-2201	folate transformations I
SOTONE4_00456	PWY-3661	glycine betaine degradation I
SOTONE4_00456	PWY-3661-1	glycine betaine degradation II (mammalian)
SOTONE4_00456	PWY-3841	folate transformations II
SOTONE4_00456	PWY-5497	purine nucleobases degradation II (anaerobic)
SOTONE4_00457	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SOTONE4_00457	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SOTONE4_00458	PWY-7560	methylerythritol phosphate pathway II
SOTONE4_00470	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SOTONE4_00477	PWY-7205	CMP phosphorylation
SOTONE4_00480	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SOTONE4_00480	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SOTONE4_00487	PWY-7560	methylerythritol phosphate pathway II
SOTONE4_00518	PWY-622	starch biosynthesis
SOTONE4_00520	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00525	PWY-5269	cardiolipin biosynthesis II
SOTONE4_00525	PWY-5668	cardiolipin biosynthesis I
SOTONE4_00529	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SOTONE4_00529	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SOTONE4_00530	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SOTONE4_00530	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
SOTONE4_00530	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SOTONE4_00530	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00530	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
SOTONE4_00530	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SOTONE4_00530	PWY-7205	CMP phosphorylation
SOTONE4_00530	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SOTONE4_00530	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00530	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00530	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00530	PWY-7224	purine deoxyribonucleosides salvage
SOTONE4_00530	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SOTONE4_00530	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00536	PWY-1042	glycolysis IV (plant cytosol)
SOTONE4_00536	PWY-5484	glycolysis II (from fructose 6-phosphate)
SOTONE4_00536	PWY-6901	superpathway of glucose and xylose degradation
SOTONE4_00536	PWY-7003	glycerol degradation to butanol
SOTONE4_00563	PWY-5971	palmitate biosynthesis II (bacteria and plants)
SOTONE4_00563	PWY-5973	<i>cis</i>-vaccenate biosynthesis
SOTONE4_00563	PWY-5989	stearate biosynthesis II (bacteria and plants)
SOTONE4_00563	PWY-5994	palmitate biosynthesis I (animals and fungi)
SOTONE4_00563	PWY-6113	superpathway of mycolate biosynthesis
SOTONE4_00563	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
SOTONE4_00563	PWY-6519	8-amino-7-oxononanoate biosynthesis I
SOTONE4_00563	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
SOTONE4_00563	PWYG-321	mycolate biosynthesis
SOTONE4_00589	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
SOTONE4_00589	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
SOTONE4_00590	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SOTONE4_00590	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SOTONE4_00590	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
SOTONE4_00619	PWY-1042	glycolysis IV (plant cytosol)
SOTONE4_00619	PWY-1622	formaldehyde assimilation I (serine pathway)
SOTONE4_00619	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
SOTONE4_00619	PWY-5484	glycolysis II (from fructose 6-phosphate)
SOTONE4_00619	PWY-5723	Rubisco shunt
SOTONE4_00619	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
SOTONE4_00619	PWY-6886	1-butanol autotrophic biosynthesis
SOTONE4_00619	PWY-6901	superpathway of glucose and xylose degradation
SOTONE4_00619	PWY-7003	glycerol degradation to butanol
SOTONE4_00619	PWY-7124	ethylene biosynthesis V (engineered)
SOTONE4_00619	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
SOTONE4_00623	PWY-3781	aerobic respiration I (cytochrome c)
SOTONE4_00623	PWY-4302	aerobic respiration III (alternative oxidase pathway)
SOTONE4_00623	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SOTONE4_00623	PWY-5690	TCA cycle II (plants and fungi)
SOTONE4_00623	PWY-6728	methylaspartate cycle
SOTONE4_00623	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SOTONE4_00623	PWY-7254	TCA cycle VII (acetate-producers)
SOTONE4_00623	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
SOTONE4_00640	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
SOTONE4_00646	PWY-5199	factor 420 polyglutamylation
SOTONE4_00647	PWY-3841	folate transformations II
SOTONE4_00647	PWY-6614	tetrahydrofolate biosynthesis
SOTONE4_00648	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SOTONE4_00648	PWY-6148	tetrahydromethanopterin biosynthesis
SOTONE4_00648	PWY-6614	tetrahydrofolate biosynthesis
SOTONE4_00648	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SOTONE4_00648	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SOTONE4_00649	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
SOTONE4_00649	PWY-6148	tetrahydromethanopterin biosynthesis
SOTONE4_00649	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
SOTONE4_00649	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SOTONE4_00664	PWY-3221	dTDP-L-rhamnose biosynthesis II
SOTONE4_00664	PWY-6808	dTDP-D-forosamine biosynthesis
SOTONE4_00664	PWY-6942	dTDP-D-desosamine biosynthesis
SOTONE4_00664	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
SOTONE4_00664	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
SOTONE4_00664	PWY-6974	dTDP-L-olivose biosynthesis
SOTONE4_00664	PWY-6976	dTDP-L-mycarose biosynthesis
SOTONE4_00664	PWY-7104	dTDP-L-megosamine biosynthesis
SOTONE4_00664	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
SOTONE4_00664	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
SOTONE4_00664	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
SOTONE4_00664	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
SOTONE4_00664	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
SOTONE4_00664	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
SOTONE4_00664	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
SOTONE4_00664	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
SOTONE4_00668	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SOTONE4_00669	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SOTONE4_00669	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
SOTONE4_00674	PWY-5913	TCA cycle VI (obligate autotrophs)
SOTONE4_00674	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
SOTONE4_00674	PWY-6638	sulfolactate degradation III
SOTONE4_00674	PWY-6642	(<i>R</i>)-cysteate degradation
SOTONE4_00674	PWY-6643	coenzyme M biosynthesis II
SOTONE4_00674	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
SOTONE4_00674	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
SOTONE4_00674	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SOTONE4_00693	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
SOTONE4_00693	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
SOTONE4_00701	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
SOTONE4_00708	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00730	PWY-6823	molybdenum cofactor biosynthesis
SOTONE4_00730	PWY-6891	thiazole biosynthesis II (Bacillus)
SOTONE4_00730	PWY-6892	thiazole biosynthesis I (E. coli)
SOTONE4_00730	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
SOTONE4_00736	PWY-1042	glycolysis IV (plant cytosol)
SOTONE4_00736	PWY-5484	glycolysis II (from fructose 6-phosphate)
SOTONE4_00736	PWY-6886	1-butanol autotrophic biosynthesis
SOTONE4_00736	PWY-6901	superpathway of glucose and xylose degradation
SOTONE4_00736	PWY-7003	glycerol degradation to butanol
SOTONE4_00742	PWY-5669	phosphatidylethanolamine biosynthesis I
SOTONE4_00754	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
SOTONE4_00758	PWY-5667	CDP-diacylglycerol biosynthesis I
SOTONE4_00758	PWY-5981	CDP-diacylglycerol biosynthesis III
SOTONE4_00761	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00766	PWY-1622	formaldehyde assimilation I (serine pathway)
SOTONE4_00766	PWY-5484	glycolysis II (from fructose 6-phosphate)
SOTONE4_00769	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
SOTONE4_00769	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
SOTONE4_00773	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
SOTONE4_00775	PWY-6167	flavin biosynthesis II (archaea)
SOTONE4_00775	PWY-6168	flavin biosynthesis III (fungi)
SOTONE4_00775	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
SOTONE4_00776	PWY-6167	flavin biosynthesis II (archaea)
SOTONE4_00776	PWY-6168	flavin biosynthesis III (fungi)
SOTONE4_00795	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
SOTONE4_00795	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
SOTONE4_00801	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
SOTONE4_00801	PWY-5723	Rubisco shunt
SOTONE4_00801	PWY-6891	thiazole biosynthesis II (Bacillus)
SOTONE4_00801	PWY-6892	thiazole biosynthesis I (E. coli)
SOTONE4_00801	PWY-6901	superpathway of glucose and xylose degradation
SOTONE4_00801	PWY-7560	methylerythritol phosphate pathway II
SOTONE4_00808	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SOTONE4_00808	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SOTONE4_00809	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SOTONE4_00809	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SOTONE4_00809	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SOTONE4_00810	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SOTONE4_00810	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SOTONE4_00813	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
SOTONE4_00813	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
SOTONE4_00813	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
SOTONE4_00813	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
SOTONE4_00814	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SOTONE4_00814	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SOTONE4_00818	PWY-2781	<i>cis</i>-zeatin biosynthesis
SOTONE4_00819	PWY-5198	factor 420 biosynthesis
SOTONE4_00848	PWY-5269	cardiolipin biosynthesis II
SOTONE4_00848	PWY-5668	cardiolipin biosynthesis I
SOTONE4_00849	PWY-622	starch biosynthesis
SOTONE4_00856	PWY-7560	methylerythritol phosphate pathway II
SOTONE4_00860	PWY-5667	CDP-diacylglycerol biosynthesis I
SOTONE4_00860	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
SOTONE4_00870	PWY-6749	CMP-legionaminate biosynthesis I
SOTONE4_00871	PWY-6749	CMP-legionaminate biosynthesis I
SOTONE4_00877	PWY-5392	reductive TCA cycle II
SOTONE4_00877	PWY-5537	pyruvate fermentation to acetate V
SOTONE4_00877	PWY-5538	pyruvate fermentation to acetate VI
SOTONE4_00877	PWY-5690	TCA cycle II (plants and fungi)
SOTONE4_00877	PWY-5913	TCA cycle VI (obligate autotrophs)
SOTONE4_00877	PWY-6728	methylaspartate cycle
SOTONE4_00877	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SOTONE4_00877	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SOTONE4_00878	PWY-5392	reductive TCA cycle II
SOTONE4_00878	PWY-5537	pyruvate fermentation to acetate V
SOTONE4_00878	PWY-5538	pyruvate fermentation to acetate VI
SOTONE4_00878	PWY-5690	TCA cycle II (plants and fungi)
SOTONE4_00878	PWY-5913	TCA cycle VI (obligate autotrophs)
SOTONE4_00878	PWY-6728	methylaspartate cycle
SOTONE4_00878	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SOTONE4_00878	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SOTONE4_00883	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SOTONE4_00883	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SOTONE4_00883	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SOTONE4_00883	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SOTONE4_00883	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00883	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00883	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SOTONE4_00883	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00884	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
SOTONE4_00884	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
SOTONE4_00884	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
SOTONE4_00884	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
SOTONE4_00884	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00884	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
SOTONE4_00884	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
SOTONE4_00884	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
SOTONE4_00888	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
SOTONE4_00888	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
SOTONE4_00914	PWY-5392	reductive TCA cycle II
SOTONE4_00914	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
SOTONE4_00914	PWY-5690	TCA cycle II (plants and fungi)
SOTONE4_00914	PWY-5913	TCA cycle VI (obligate autotrophs)
SOTONE4_00914	PWY-6728	methylaspartate cycle
SOTONE4_00914	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
SOTONE4_00914	PWY-7254	TCA cycle VII (acetate-producers)
SOTONE4_00914	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
SOTONE4_00918	PWY-7560	methylerythritol phosphate pathway II
SOTONE4_00927	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
SOTONE4_00927	PWY-622	starch biosynthesis
