CF0001	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CF0004	PWY-3221	dTDP-L-rhamnose biosynthesis II
CF0004	PWY-6808	dTDP-D-forosamine biosynthesis
CF0004	PWY-6942	dTDP-D-desosamine biosynthesis
CF0004	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CF0004	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CF0004	PWY-6974	dTDP-L-olivose biosynthesis
CF0004	PWY-6976	dTDP-L-mycarose biosynthesis
CF0004	PWY-7104	dTDP-L-megosamine biosynthesis
CF0004	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CF0004	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CF0004	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CF0004	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CF0004	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CF0004	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CF0004	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CF0004	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CF0013	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CF0013	PWY-6148	tetrahydromethanopterin biosynthesis
CF0013	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CF0013	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CF0014	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CF0014	PWY-6148	tetrahydromethanopterin biosynthesis
CF0014	PWY-6614	tetrahydrofolate biosynthesis
CF0014	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CF0014	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CF0015	PWY-3841	folate transformations II
CF0015	PWY-6614	tetrahydrofolate biosynthesis
CF0016	PWY-5199	factor 420 polyglutamylation
CF0031	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CF0045	PWY-3781	aerobic respiration I (cytochrome c)
CF0045	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CF0045	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CF0045	PWY-5690	TCA cycle II (plants and fungi)
CF0045	PWY-6728	methylaspartate cycle
CF0045	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CF0045	PWY-7254	TCA cycle VII (acetate-producers)
CF0045	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CF0046	PWY-3781	aerobic respiration I (cytochrome c)
CF0046	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CF0046	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CF0046	PWY-5690	TCA cycle II (plants and fungi)
CF0046	PWY-6728	methylaspartate cycle
CF0046	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CF0046	PWY-7254	TCA cycle VII (acetate-producers)
CF0046	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CF0051	PWY-1042	glycolysis IV (plant cytosol)
CF0051	PWY-1622	formaldehyde assimilation I (serine pathway)
CF0051	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CF0051	PWY-5484	glycolysis II (from fructose 6-phosphate)
CF0051	PWY-5723	Rubisco shunt
CF0051	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CF0051	PWY-6886	1-butanol autotrophic biosynthesis
CF0051	PWY-6901	superpathway of glucose and xylose degradation
CF0051	PWY-7003	glycerol degradation to butanol
CF0051	PWY-7124	ethylene biosynthesis V (engineered)
CF0051	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CF0080	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CF0080	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CF0080	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CF0081	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CF0081	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CF0087	PWY-5669	phosphatidylethanolamine biosynthesis I
CF0098	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CF0102	PWY-5667	CDP-diacylglycerol biosynthesis I
CF0102	PWY-5981	CDP-diacylglycerol biosynthesis III
CF0105	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CF0110	PWY-1622	formaldehyde assimilation I (serine pathway)
CF0110	PWY-5484	glycolysis II (from fructose 6-phosphate)
CF0113	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CF0113	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CF0117	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CF0119	PWY-6167	flavin biosynthesis II (archaea)
CF0119	PWY-6168	flavin biosynthesis III (fungi)
CF0119	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CF0120	PWY-6167	flavin biosynthesis II (archaea)
CF0120	PWY-6168	flavin biosynthesis III (fungi)
CF0136	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CF0136	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CF0138	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CF0138	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CF0141	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CF0141	PWY-5723	Rubisco shunt
CF0141	PWY-6891	thiazole biosynthesis II (Bacillus)
CF0141	PWY-6892	thiazole biosynthesis I (E. coli)
CF0141	PWY-6901	superpathway of glucose and xylose degradation
CF0141	PWY-7560	methylerythritol phosphate pathway II
CF0147	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CF0147	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CF0148	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CF0148	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CF0148	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CF0149	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CF0149	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CF0152	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CF0152	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CF0152	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CF0152	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CF0153	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CF0153	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CF0158	PWY-2781	<i>cis</i>-zeatin biosynthesis
CF0159	PWY-5198	factor 420 biosynthesis
CF0192	PWY-5269	cardiolipin biosynthesis II
CF0192	PWY-5668	cardiolipin biosynthesis I
CF0193	PWY-622	starch biosynthesis
CF0199	PWY-7560	methylerythritol phosphate pathway II
CF0204	PWY-5667	CDP-diacylglycerol biosynthesis I
CF0204	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CF0224	PWY-6749	CMP-legionaminate biosynthesis I
CF0225	PWY-6749	CMP-legionaminate biosynthesis I
CF0229	PWY-5392	reductive TCA cycle II
CF0229	PWY-5537	pyruvate fermentation to acetate V
CF0229	PWY-5538	pyruvate fermentation to acetate VI
CF0229	PWY-5690	TCA cycle II (plants and fungi)
CF0229	PWY-5913	TCA cycle VI (obligate autotrophs)
CF0229	PWY-6728	methylaspartate cycle
CF0229	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CF0229	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CF0230	PWY-5392	reductive TCA cycle II
CF0230	PWY-5537	pyruvate fermentation to acetate V
CF0230	PWY-5538	pyruvate fermentation to acetate VI
CF0230	PWY-5690	TCA cycle II (plants and fungi)
CF0230	PWY-5913	TCA cycle VI (obligate autotrophs)
CF0230	PWY-6728	methylaspartate cycle
CF0230	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CF0230	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CF0237	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CF0237	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CF0237	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CF0237	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CF0237	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0237	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0237	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CF0237	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CF0238	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CF0238	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CF0238	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CF0238	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CF0238	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0238	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0238	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CF0238	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CF0241	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CF0241	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CF0265	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CF0267	PWY-5392	reductive TCA cycle II
CF0267	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CF0267	PWY-5690	TCA cycle II (plants and fungi)
CF0267	PWY-5913	TCA cycle VI (obligate autotrophs)
CF0267	PWY-6728	methylaspartate cycle
CF0267	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CF0267	PWY-7254	TCA cycle VII (acetate-producers)
CF0267	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CF0272	PWY-7560	methylerythritol phosphate pathway II
CF0273	PWY-6424	CF0273|CF0273|YP_515190.1|GeneID:3958843
CF0280	PWY-3801	sucrose degradation II (sucrose synthase)
CF0280	PWY-5054	sorbitol biosynthesis I
CF0280	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CF0280	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CF0280	PWY-5659	GDP-mannose biosynthesis
CF0280	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CF0280	PWY-621	sucrose degradation III (sucrose invertase)
CF0280	PWY-622	starch biosynthesis
CF0280	PWY-6531	mannitol cycle
CF0280	PWY-6981	chitin biosynthesis
CF0280	PWY-7238	sucrose biosynthesis II
CF0280	PWY-7347	sucrose biosynthesis III
CF0280	PWY-7385	1,3-propanediol biosynthesis (engineered)
CF0282	PWY-1622	formaldehyde assimilation I (serine pathway)
CF0282	PWY-5392	reductive TCA cycle II
CF0282	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CF0282	PWY-5690	TCA cycle II (plants and fungi)
CF0282	PWY-5913	TCA cycle VI (obligate autotrophs)
CF0282	PWY-6728	methylaspartate cycle
CF0282	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CF0282	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CF0282	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CF0286	PWY-40	putrescine biosynthesis I
CF0286	PWY-43	putrescine biosynthesis II
CF0286	PWY-6305	putrescine biosynthesis IV
CF0286	PWY-6834	spermidine biosynthesis III
CF0289	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CF0289	PWY-6416	quinate degradation II
CF0289	PWY-6707	gallate biosynthesis
CF0290	PWY-6164	3-dehydroquinate biosynthesis I
CF0291	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CF0292	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CF0293	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CF0296	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CF0298	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CF0303	PWY-2941	L-lysine biosynthesis II
CF0303	PWY-2942	L-lysine biosynthesis III
CF0303	PWY-5097	L-lysine biosynthesis VI
CF0304	PWY-2941	L-lysine biosynthesis II
CF0304	PWY-2942	L-lysine biosynthesis III
CF0304	PWY-5097	L-lysine biosynthesis VI
CF0304	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CF0304	PWY-6559	spermidine biosynthesis II
CF0304	PWY-6562	norspermidine biosynthesis
CF0304	PWY-7153	grixazone biosynthesis
CF0304	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CF0305	PWY-2941	L-lysine biosynthesis II
CF0305	PWY-2942	L-lysine biosynthesis III
CF0305	PWY-5097	L-lysine biosynthesis VI
CF0305	PWY-6559	spermidine biosynthesis II
CF0305	PWY-6562	norspermidine biosynthesis
CF0305	PWY-7153	grixazone biosynthesis
CF0306	PWY-2941	L-lysine biosynthesis II
CF0306	PWY-2942	L-lysine biosynthesis III
CF0306	PWY-5097	L-lysine biosynthesis VI
CF0322	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CF0322	PWY-5723	Rubisco shunt
CF0327	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CF0328	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CF0336	PWY-1042	glycolysis IV (plant cytosol)
CF0336	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CF0336	PWY-5484	glycolysis II (from fructose 6-phosphate)
CF0336	PWY-5723	Rubisco shunt
CF0336	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CF0336	PWY-6886	1-butanol autotrophic biosynthesis
CF0336	PWY-6901	superpathway of glucose and xylose degradation
CF0336	PWY-7003	glycerol degradation to butanol
CF0336	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CF0336	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CF0355	PWY-6829	tRNA methylation (yeast)
CF0355	PWY-7285	methylwyosine biosynthesis
CF0355	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CF0358	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CF0368	PWY-5663	tetrahydrobiopterin biosynthesis I
CF0368	PWY-5664	tetrahydrobiopterin biosynthesis II
CF0368	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CF0368	PWY-6703	preQ<sub>0</sub> biosynthesis
CF0368	PWY-6983	tetrahydrobiopterin biosynthesis III
CF0368	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CF0371	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CF0371	PWY-5723	Rubisco shunt
CF0374	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CF0393	PWY-1042	glycolysis IV (plant cytosol)
CF0393	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CF0393	PWY-5484	glycolysis II (from fructose 6-phosphate)
CF0393	PWY-7385	1,3-propanediol biosynthesis (engineered)
CF0395	PWY-1042	glycolysis IV (plant cytosol)
CF0395	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CF0395	PWY-5484	glycolysis II (from fructose 6-phosphate)
CF0395	PWY-7385	1,3-propanediol biosynthesis (engineered)
CF0407	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CF0407	PWY-7177	UTP and CTP dephosphorylation II
CF0407	PWY-7185	UTP and CTP dephosphorylation I
CF0408	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CF0408	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CF0419	PWY-6700	queuosine biosynthesis
CF0428	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CF0434	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CF0434	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CF0457	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CF0457	PWY-5723	Rubisco shunt
CF0468	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CF0469	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CF0469	PWY-6855	chitin degradation I (archaea)
CF0469	PWY-6906	chitin derivatives degradation
CF0474	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CF0488	PWY-5381	pyridine nucleotide cycling (plants)
CF0488	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CF0488	PWY-6596	adenosine nucleotides degradation I
CF0488	PWY-6606	guanosine nucleotides degradation II
CF0488	PWY-6607	guanosine nucleotides degradation I
CF0488	PWY-6608	guanosine nucleotides degradation III
CF0488	PWY-7185	UTP and CTP dephosphorylation I
CF0495	PWY-7533	gliotoxin biosynthesis
CF0500	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CF0500	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CF0500	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0500	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CF0500	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CF0500	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CF0521	PWY-5367	petroselinate biosynthesis
CF0521	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CF0521	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CF0521	PWY-5989	stearate biosynthesis II (bacteria and plants)
CF0521	PWY-5994	palmitate biosynthesis I (animals and fungi)
CF0521	PWY-6113	superpathway of mycolate biosynthesis
CF0521	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CF0521	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CF0521	PWY-6951	CF0521|fabG|YP_515438.1|GeneID:3958611
CF0521	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CF0521	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CF0521	PWYG-321	mycolate biosynthesis
CF0522	PWY-4381	fatty acid biosynthesis initiation I
CF0522	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CF0522	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CF0523	PWY-4381	fatty acid biosynthesis initiation I
CF0532	PWY-5941	glycogen degradation II (eukaryotic)
CF0532	PWY-622	starch biosynthesis
CF0532	PWY-6731	starch degradation III
CF0532	PWY-6737	starch degradation V
CF0532	PWY-7238	sucrose biosynthesis II
CF0538	PWY-6012	acyl carrier protein metabolism I
CF0538	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CF0545	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CF0545	PWY-6167	flavin biosynthesis II (archaea)
CF0545	PWY-6168	flavin biosynthesis III (fungi)
CF0551	PWY-5941	glycogen degradation II (eukaryotic)
CF0551	PWY-6724	starch degradation II
CF0551	PWY-6737	starch degradation V
CF0551	PWY-7238	sucrose biosynthesis II
CF0559	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CF0559	PWY-2201	folate transformations I
CF0559	PWY-3841	folate transformations II
CF0559	PWY-5030	L-histidine degradation III
CF0559	PWY-5497	purine nucleobases degradation II (anaerobic)
CF0559	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CF0566	PWY-7560	methylerythritol phosphate pathway II
CF0584	PWY-7560	methylerythritol phosphate pathway II
CF0586	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CF0587	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CF0597	PWY-5988	wound-induced proteolysis I
CF0597	PWY-6018	seed germination protein turnover
CF0603	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0607	PWY-6823	molybdenum cofactor biosynthesis
CF0607	PWY-6891	thiazole biosynthesis II (Bacillus)
CF0607	PWY-6892	thiazole biosynthesis I (E. coli)
CF0607	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CF0628	PWY-4381	fatty acid biosynthesis initiation I
CF0628	PWY-5743	3-hydroxypropanoate cycle
CF0628	PWY-5744	glyoxylate assimilation
CF0628	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CF0628	PWY-6679	jadomycin biosynthesis
CF0628	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CF0651	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CF0651	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CF0659	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CF0659	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CF0659	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0659	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CF0660	PWY-4381	fatty acid biosynthesis initiation I
CF0660	PWY-5743	3-hydroxypropanoate cycle
CF0660	PWY-5744	glyoxylate assimilation
CF0660	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CF0660	PWY-6679	jadomycin biosynthesis
CF0660	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CF0661	PWY-6854	ethylene biosynthesis III (microbes)
CF0662	PWY-6749	CMP-legionaminate biosynthesis I
CF0666	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CF0666	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CF0695	PWY-1042	glycolysis IV (plant cytosol)
CF0695	PWY-5484	glycolysis II (from fructose 6-phosphate)
CF0695	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CF0695	PWY-7003	glycerol degradation to butanol
CF0699	PWY-6891	thiazole biosynthesis II (Bacillus)
CF0699	PWY-6892	thiazole biosynthesis I (E. coli)
CF0699	PWY-7560	methylerythritol phosphate pathway II
CF0715	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CF0740	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CF0740	PWY-622	starch biosynthesis
CF0748	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CF0748	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CF0748	PWY-6164	3-dehydroquinate biosynthesis I
CF0757	PWY-5097	L-lysine biosynthesis VI
CF0776	PWY-5198	factor 420 biosynthesis
CF0778	PWY-5839	menaquinol-7 biosynthesis
CF0778	PWY-5844	menaquinol-9 biosynthesis
CF0778	PWY-5849	menaquinol-6 biosynthesis
CF0778	PWY-5890	menaquinol-10 biosynthesis
CF0778	PWY-5891	menaquinol-11 biosynthesis
CF0778	PWY-5892	menaquinol-12 biosynthesis
CF0778	PWY-5895	menaquinol-13 biosynthesis
CF0780	PWY-2941	L-lysine biosynthesis II
CF0780	PWY-5097	L-lysine biosynthesis VI
CF0782	PWY-1622	formaldehyde assimilation I (serine pathway)
CF0782	PWY-181	photorespiration
CF0782	PWY-2161	folate polyglutamylation
CF0782	PWY-2201	folate transformations I
CF0782	PWY-3661	glycine betaine degradation I
CF0782	PWY-3661-1	glycine betaine degradation II (mammalian)
CF0782	PWY-3841	folate transformations II
CF0782	PWY-5497	purine nucleobases degradation II (anaerobic)
CF0783	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CF0783	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CF0794	PWY-6167	flavin biosynthesis II (archaea)
CF0794	PWY-6168	flavin biosynthesis III (fungi)
CF0794	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CF0803	PWY-6897	thiamin salvage II
CF0803	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
CF0803	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CF0804	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CF0804	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CF0804	PWY-6897	thiamin salvage II
CF0804	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CF0804	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CF0804	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
CF0804	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CF0812	PWY-7560	methylerythritol phosphate pathway II
CF0824	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CF0833	PWY-7205	CMP phosphorylation
CF0836	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CF0836	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CF0845	PWY-7560	methylerythritol phosphate pathway II
CF0873	PWY-622	starch biosynthesis
CF0874	PWY-5686	UMP biosynthesis
CF0876	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CF0881	PWY-5269	cardiolipin biosynthesis II
CF0881	PWY-5668	cardiolipin biosynthesis I
CF0884	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CF0884	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CF0885	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CF0885	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CF0885	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CF0885	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0885	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CF0885	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CF0885	PWY-7205	CMP phosphorylation
CF0885	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CF0885	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0885	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CF0885	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CF0885	PWY-7224	purine deoxyribonucleosides salvage
CF0885	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CF0885	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CF0890	PWY-1042	glycolysis IV (plant cytosol)
CF0890	PWY-5484	glycolysis II (from fructose 6-phosphate)
CF0890	PWY-6901	superpathway of glucose and xylose degradation
CF0890	PWY-7003	glycerol degradation to butanol
CF0917	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CF0917	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CF0917	PWY-5989	stearate biosynthesis II (bacteria and plants)
CF0917	PWY-5994	palmitate biosynthesis I (animals and fungi)
CF0917	PWY-6113	superpathway of mycolate biosynthesis
CF0917	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CF0917	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CF0917	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CF0917	PWYG-321	mycolate biosynthesis
CF0943	PWY-1042	glycolysis IV (plant cytosol)
CF0943	PWY-5484	glycolysis II (from fructose 6-phosphate)
CF0943	PWY-6886	1-butanol autotrophic biosynthesis
CF0943	PWY-6901	superpathway of glucose and xylose degradation
CF0943	PWY-7003	glycerol degradation to butanol
CF0951	PWY-6823	molybdenum cofactor biosynthesis
CF0951	PWY-6891	thiazole biosynthesis II (Bacillus)
CF0951	PWY-6892	thiazole biosynthesis I (E. coli)
CF0951	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CF0970	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CF0977	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CF0985	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CF0985	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CF1001	PWY-5913	TCA cycle VI (obligate autotrophs)
CF1001	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
CF1001	PWY-6638	sulfolactate degradation III
CF1001	PWY-6642	(<i>R</i>)-cysteate degradation
CF1001	PWY-6643	coenzyme M biosynthesis II
CF1001	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CF1001	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CF1001	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CF1005	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CF1005	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
