        hemB    1145 ..    1158 +  -5.3   -4.4458   TCTTCGAGAGTGTAA               GTTCT TCGA AGAAC                TTTATTCTGTATCTG  69 26
        greA    5432 ..    5452 +  -3.3  -3.00863   CAATCTTTGTTATAA            TACGAAGGA ATT TCTTTGGTA            TGAGTTTTTTTAATC  45 156
  CPSIT_0006    6703 ..    6727 +    -8  -4.93547   AAATCCTCATAACGA         TA-GCGCAGAT AACT ATCTGCGCGTA          TTTTTAATTAATTGC  90 83
  CPSIT_0008    8113 ..    8135 +  -3.4  -4.65078   GATAATCCAGGTTAT           GCTCTTTGAT GTA AGCAAAGAGA           TTTTCTTGAGAATAT  64 182
  CPSIT_0011   15859 ..   15873 +  -4.2  -3.60035   CTAGTGTAGACAGCA               GCAGCT GGC AGCTTC               TTCCTTCTCTTTCTG  55 65
        rpsD   17704 ..   17730 + -11.7   -4.9251   CTTCCAAAAAGAGAG         GCGTCAACTAT CTTTT ATAGTTGGCGC         TTTTGATTTTTTATT 100 55
  CPSIT_0016 NONE
  CPSIT_0017   21743 ..   21769 +  -7.4  -6.38655   AAATCTTTAAAAAGA         GCTCATATCT AATTAAA AGATGTGAGC         TTTTTTTTTATCTTT 100 55
  CPSIT_0018   23778 ..   23802 +  -9.3  -5.71983   TGATTTCCTCAAAAG          CCTGTTCTGTA TTG TTCAGAGCAGG          TTTTTTTATGCTTAG 100 62
  CPSIT_0020 NONE
  CPSIT_0021   29687 ..   29697 +  -5.4   -2.6462   TTTGAGAGGAAGAAC                 CTTC GAA GAAG                 ATCTTTCCGTCAATA  51 93
  CPSIT_0032   39223 ..   39243 +  -5.5  -4.04474   AAAATACTCTAGGCT            TTCATCG TTAACTC CGATGAA            TTTGTATGCAAGTGT  63 75
  CPSIT_0033 NONE
  CPSIT_0034 NONE
  CPSIT_0035 NONE
  CPSIT_0036 NONE
  CPSIT_0037 NONE
  CPSIT_0038 NONE
  CPSIT_0039 NONE
  CPSIT_0040 NONE
  CPSIT_0041 NONE
        copE NONE
        sctQ   47980 ..   48000 +  -3.3  -2.82023   ACGTATAATTGTCTC            TTATGGATT GTC AATCCGAAA            TACTTCCTCTGAATC  44 41
  CPSIT_0044 NONE
  CPSIT_0045   52286 ..   52328 +    -5   -5.4505   CATTTCAGGGGGAAA GCCAAGAAAGCATC-GTCG GCCGTA TGATTGTTGTTTTCTTGGC TTTTTTGTTCCCCAA  83 101
  CPSIT_0059 NONE
  CPSIT_0060   64537 ..   64571 +  -6.4  -4.53349   TTCTTTTCTAAACAA     GTGTGAAAGTTAAAGC TTC GCTTTTTCCTTCACGC     TTTCTTTAATGCTTC  76 226
        sufB NONE
  CPSIT_0062 NONE
  CPSIT_0063 NONE
        sufS   69680 ..   69694 +  -2.8   -4.9792   GAAAAACCCTACAGG               GTTTTG CCC CAAGGC               TTTTTCTATAGAATA  68 317
  CPSIT_0068   72197 ..   72208 +  -2.2  -5.42265   GTTCTGGGATAGGTC                CTTG AAGG CAGG                 TTTTTTGTCGTTTAG  76 115
  CPSIT_0071 NONE
  CPSIT_0072 NONE
  CPSIT_0073   77381 ..   77406 + -14.9  -3.20348   GGTTTCTTTTTAATA         GCATAAAGCTG AATC CAGCTTTATGC          TTAAATCTTCATCAG  95 78
  CPSIT_0074 NONE
  CPSIT_0075 NONE
  CPSIT_0076   81822 ..   81853 +    -8   -3.2756   TTATGCTGTTGTGGG      GAGTGTTCTCGACT CTGG AGATGAGAGCGCTC       TAGTTATTTTTTCTT  70 47
  CPSIT_0077   83231 ..   83243 +  -6.3  -3.54012   CCTGTTTTAGAAAGT                GAACA TGT TGTTC                TTCTCTCACTACTTT  64 222
  CPSIT_0080   85379 ..   85391 +  -4.9  -3.14463   TCGCATCCTCGTGCC                TTTCA TAC TGAAA                TTCATCCACCGAGTT  53 73
  CPSIT_0084   88777 ..   88793 +  -6.5  -3.92869   CATCGGCAAGATAAG              CGTAGAG ATT CGCTACG              TTTATCAATAGATAA  66 449
  CPSIT_0087   93927 ..   93943 +  -5.9  -3.52341   TTTAATTTTGCTCTT              TATCCGA ATT TTGGATA              TTCTACTCTTAAAGT  61 36
        hisS NONE
        aspS NONE
  CPSIT_0090 NONE
  CPSIT_0091   98431 ..   98448 +  -7.7  -2.83701   AAGAAACTCCGTACT             GTTCTGC TGGA GCAGGAC              TGTCATCAATATTTA  62 141
  CPSIT_0094   99595 ..   99609 +  -5.8  -3.55173   CAATGGCTAGTAGCT               TTATGT TCA ACATAA               TTCTCGTGTTATGCT  62 436
  CPSIT_0095 NONE
  CPSIT_0096 NONE
  CPSIT_0097  101670 ..  101686 +  -8.1   -4.4572   TTGGATTGTAAAACA              CTTTTAC TTT GTAAAAG              TTTATTTGAAATCTT  83 30
  CPSIT_0098  102350 ..  102367 +  -3.4  -3.41652   ATTCTCATAGCTTGC             GCTCAG CCTGAT TTGAGC              TGGTTTTTCTCTTTA  48 81
         lnt NONE
        lpxC NONE
        fabZ NONE
        lpxA NONE
         fmt  107144 ..  107154 +  -2.6  -4.25104   GTTATAATTGGGGCT                 TAAA ATC TTTA                 TTTTGCTAAAAAAAC  55 87
  CPSIT_0104  108202 ..  108226 +   -13  -6.08342   TGGCAATATTGTAAA          TCGCTTCTAG AAAAC CTAGAAGCGA          TTTTTTTATTTATTA 100 60
        rplC NONE
  CPSIT_0107 NONE
  CPSIT_0108 NONE
        rplB NONE
        rpsS NONE
  CPSIT_0111 NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN  113654 ..  113664 +  -2.4  -2.74144   AAATTAGTTCTTTGG                 CCCC TGA GGTG                 ATTTAAGGATAAGAA  40 9
        rplX NONE
  CPSIT_0118 NONE
  CPSIT_0119 NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rplO NONE
        secY  118356 ..  118370 +  -5.7  -2.75957   CTTTAAGGGAGGCCC               TGCGT ATGCC ACGCA               TCATTGGAATTGATA  51 76
        rpsM NONE
        rpsK NONE
        rpoA NONE
        rplQ NONE
         gap NONE
  CPSIT_0130  122867 ..  122879 +  -2.7  -3.85156   GTGCAAGTTCGAGTC                TTGTT CTG AGCAA                CTTTTCTTTTTGTTT  51 276
  CPSIT_0132  124011 ..  124021 +  -3.2  -3.65201   CAATGTATTCAAGAA                 TCAC AAT GTGG                 TTCTTAGAAATCTTA  50 8
        ruvC NONE
        ruvA NONE
  CPSIT_0135  125816 ..  125841 +  -4.1  -3.55444   TGGTTTTTCTAAGAT         TTCTTTCAG TTCATTTT CTGAAAGAG          TTTCCCAGATAAAAC  52 80
  CPSIT_0141 NONE
  CPSIT_0142  133242 ..  133255 +  -9.5  -5.20606   ACGCTATAATTTAAA               GGGCG TTTA CGCCC                TTTTTATTCATATTT 100 32
  CPSIT_0143 NONE
  CPSIT_0144 NONE
        coaE NONE
         rho  139041 ..  139066 + -13.5  -2.68545   TGAGAATCCTGAAGC         CTACAGTCTTA GCTA TAAGACTGTAG          ATCTTATTCTCCACA  89 91
  CPSIT_0149  140166 ..  140176 +    -4  -4.08571   GCCATAGCTTCTGCA                 CTTT TAG AAAG                 TTTATAATATTATGC  57 8
        glgC  141688 ..  141699 +  -4.4  -4.09243   GACTTCCCCTATTTT                TCTC TATC GAGA                 TTTTAGCACGATATC  62 66
  CPSIT_0151 NONE
  CPSIT_0152  143120 ..  143137 +  -7.1  -5.12707   ACAGCTAGTATGTTT             TCTGTTT TGAT AAACAGA              TTTTTTAGCCTTTAA  88 79
  CPSIT_0153  144178 ..  144198 +  -3.3   -2.8655   TATTCTTTTTCTATT            TCGTACAGA GTT TCTATATGA            TCTGATGTAAATCCA  44 184
  CPSIT_0155  146095 ..  146105 +  -2.6  -2.78961   GATTTTTGTTCTTGT                 TATT TAT AATA                 GTTCTACTTGTTTAT  42 39
  CPSIT_0156  146778 ..  146815 + -12.3   -5.4505   AAAACACAGCCATAA   GGATCTTCTTAGCTAAAT GTC ACTT-GCTAAGAAGATCC   TTTTTTATTGCCACA 100 345
  CPSIT_0161  147913 ..  147936 + -15.4  -3.26471   TCTACTTGTGTTGAT          GAAACAGGGG GGCC CCCCTGTTTC           TTGCTGTAAACATCA 100 45
  CPSIT_0162 NONE
  CPSIT_0163 NONE
  CPSIT_0164  154563 ..  154606 +  -6.2  -2.77043   TTGTAGAGGAGGATA TTTTGCTATCTGCAAGCCT TGAGAAC AGGCTTGC-GATAGAGAGA ATTTAGAATCGTCAG  55 466
  CPSIT_0168  159276 ..  159289 +  -3.9  -3.67402   TCAACCAGAGCCCTT               TCATA CACT TATGA                TGTTTTAAAGCTTGT  52 98
  CPSIT_0172  161214 ..  161236 +  -4.2  -4.08706   TGCGTGTACGAGTGC           GTGAAGGA TTTTCTC TTCTTCAC           TTTCTATAATCACAG  59 146
  CPSIT_0179  167942 ..  167954 +  -3.4  -5.03145   TATAGGAGATTCCGT                TGCT TCTGC AGCA                TTTTTTACCAGATTC  72 275
        prfB NONE
  CPSIT_0189 NONE
  CPSIT_0190 NONE
  CPSIT_0191  176689 ..  176723 + -10.2  -3.04269   TATACCATAACATGG     CCTAAGGCTTTTCT AGATTAG AGAAAAGCCTTAGC     TGTCTATCGTCTACG  80 21
        murA  181391 ..  181413 +  -6.3  -3.38726   CTCGTTCCGCAATTT          CTGCCTCAGA CATC TCTG-GGCGG           TGCTTTTTTAAAGTA  60 504
  CPSIT_0201  187271 ..  187308 + -12.3  -5.03747   CTGGTGTCATGTGAT   TTAATCTACCCT-AGAGA TAG TCTCTTGGGGTAGATTGA   TTTTTTACGAAATTT 100 22
        secD  191728 ..  191752 + -10.2   -4.8622   AAAGAGGAAAGAAAA          CAACAATAAC CAGGA GTTATTGTTG          TTTTTGGTTCAGAAG 100 17
        recJ  193596 ..  193616 +  -2.7   -4.1897   ATACAACAGCAAGGT            TTTAATCTT TTG AATATTAAA            TTTCTGTGTCTGATT  55 21
  CPSIT_0204  195250 ..  195271 +  -6.7  -2.89668   TTGTGCCTGGATAGA           GAATCTTTT ACGT AAAAGGTTC            TCTATGGCACTGTTG  58 73
  CPSIT_0205 NONE
        gltX  198422 ..  198432 +    -4  -5.05606   CCTATTTGTTTAAAT                 GTTA GAA TAAC                 TTTCTTTTTATTAGC  73 288
  CPSIT_0207  199131 ..  199167 + -15.3  -3.86897   TACTTAAATTGGTTA    GGCAGTTAGGAGGTAAA TTA TTTCCCTGCTAACTGCC    TTTATGAAAAATAAA 100 60
  CPSIT_0208  200970 ..  201009 + -18.1  -4.37506   TGAAAGATTTGTAAA  CGAAAAGGCCGTCCTAG AATTTC CTAGGACGGCTTTTTTG   TTTCTCTTTCATCGT 100 60
  CPSIT_0209  201804 ..  201816 +  -6.3   -4.6265   GAAGGATCTTTTACT                TCTTC TAA GAAGA                TTTTATAGTTCTTAT  77 205
  CPSIT_0213  205165 ..  205177 +  -2.7  -2.88337   TATTAGAATAATTTT                TTTGA ATA TCAGA                TGATTATACTCTAAT  42 104
        rpsL  205643 ..  205656 +  -6.7  -3.75911   GATACGGAGCAAAGC               GTCCT AAGT AGGAC                TATTCTTTATTTAGG  66 15
        rpsG  206209 ..  206226 +  -2.7  -3.27525   AAGAGGCGTAACAAG             TTCATGA GTGA TCAAGAA              TTCGATTTAAGCAAG  45 64
        fusA NONE
        rpsJ NONE
  CPSIT_0219  209882 ..  209901 +    -5  -3.27704   CCTCAATAGTAATGG            CCACATGA GAAA TCATTTGG             TTCGATTTCAAAGAT  54 219
  CPSIT_0221  211059 ..  211071 +  -4.1  -3.56161   AGTTGGTAGAGCAGA                GGATT GAA GATCC                TTGTGTCGTCGGTTC  55 165
        rplU NONE
        rpmA  211887 ..  211918 +  -8.8  -4.98672   AAGTTTGTTTAGGAA      GCTCTATTTTTTGC TGAT GCATAAAATGGGGC       TTTTCTATTTTTAAC  95 65
        cgtA NONE
        thiE NONE
  CPSIT_0230  217355 ..  217407 +  -2.2  -3.48395   AGAACTTTGTATTTT TGAGTTTTGTAATTGTAGAACCGAG AATT CTAAGTTCT-CAATTACAAAACAAG TTCTCTACAAAAAGT  45 57
        ribE NONE
  CPSIT_0240 NONE
  CPSIT_0241  232263 ..  232275 +  -3.5  -3.23018   ATGATTAATTATATA                TAAAA TTT TTTTA                ATTTTCCTATGTAAA  47 133
        lpxK NONE
  CPSIT_0243 NONE
  CPSIT_0244 NONE
  CPSIT_0245  237113 ..  237131 + -10.4  -3.28712   TTATGAAAAAGTTCA             TGAGGAAT ACC ATTCCTCA             TTATGCAGAAACAAA  83 153
  CPSIT_0250 NONE
       clpP1 NONE
        dapF  244000 ..  244012 +  -2.7  -3.65375   AAAGAAAGGTCTTAC                TAGAG TTT TTCTA                ATTTTTCTATTGAAT  48 23
  CPSIT_0253  245392 ..  245409 +  -2.7  -4.14243   GGTAAGCTCCAAAAT             CCCTAGAG TCC CT-TGGGG             TTTTAACATACGATG  57 288
  CPSIT_0271 NONE
  CPSIT_0272 NONE
  CPSIT_0273  264808 ..  264855 +  -6.4  -5.33866   ACGTGTTTTGAAATT CGCTGGTGTTACAGGAATTTCTG TAA CGGAAATTCCTGAAGCAT-GGAG TTTTTTCTCGATTTC  87 475
  CPSIT_0277  267667 ..  267692 +  -7.7  -6.02914   TTTCGAAGAGAAGAA         CTGCATTTTAA TATT TTAAGGTGCAG          TTTTTTTTATATAAA 100 66
  CPSIT_0278  269447 ..  269462 +    -4  -3.76224   GAACCGCGGTTGGTT              CCAGTT TTGC AATTGG               TTTGGTAGATGGGGG  54 177
  CPSIT_0280 NONE
  CPSIT_0281  272744 ..  272786 +  -9.3  -3.79909   TTTTTTTCCTTATTA GCGAATG-TGGCTCAGGGAT CGCC ATCTTTGCGCCAACATTTGC TTATTGGTGATTTCC  81 43
  CPSIT_0282  274663 ..  274685 +    -5  -5.10497   TATCTTGTTTGTTAG           TTTCTTTTTA AAA TAAAAAGGAG           TTTTTTCAATAAATT  77 301
  CPSIT_0284  276368 ..  276397 + -18.1  -3.13343   CACCTGGTGTCTGTG       CTCACCTTCTTGT TTTC ACAAGAAGGTGAG        TTGCGTAGTTAAGCT 100 70
  CPSIT_0288  282171 ..  282184 +  -2.4  -3.49475   GTATTTTAAATAGAT               CAGA TTATTT TCTG                TTATATAAGAATGCG  45 84
  CPSIT_0289 NONE
  CPSIT_0290 NONE
        hflX NONE
  CPSIT_0292 NONE
  CPSIT_0293 NONE
        glgB  289793 ..  289822 +  -4.5  -3.76411   TTTTTATGTTCGTTT       TGTAAATAAACAA TCTC TTGTTTAATTATA        TTTAAATAATTTTAC  57 1
  CPSIT_0295  291822 ..  291836 +  -4.4  -3.20348   ATAAAATTTATCTAT               TTATTA TTT TAATAA               TTAAATATTGATAAA  51 132
  CPSIT_0296  293945 ..  293974 + -15.3  -6.02919   AAATAAGGATCTTAA       TAAGGCTATAGAA CAAA TTCTATAGCCTTA        TTTTTTTATTTCTAA 100 35
        gatC NONE
        gatA NONE
  CPSIT_0320  341132 ..  341167 + -15.8  -5.23292   GTATCTAAGGGAACG    GAGGCTCTTTTGAAGTT AAA AACTTCAAAAGAG-CTC    TTTTATTTTGTCTGA 100 78
  CPSIT_0325  346126 ..  346148 +  -5.5  -3.97602   GCCTATGCTAAAGTA           CAAGGGGAC AACTC GCCCCTTTG           TTTCTACCTATCTTC  63 51
  CPSIT_0328  351016 ..  351030 +  -3.4  -5.48054   TCTGTCCCCCTGAGA               GGGTGC TTA GGGCCC               TTTTTTAGTTTTACT  77 76
  CPSIT_0329 NONE
  CPSIT_0330  352099 ..  352115 +  -8.1  -2.52676   TCCTTTAAGAGAACT              TCTGATT TCG AATCAGA              TGCATTCGACCACTC  66 155
  CPSIT_0332 NONE
  CPSIT_0333 NONE
        ksgA  356698 ..  356711 +  -5.3  -5.98675   AGATTTTAATTTATA               TCTCT TATA AGAGA                TTTTTTATTTTTATA  93 109
        tpiA  362071 ..  362091 +  -3.3  -4.62302   GAATTTTCATCGTTA            GCTAGTAAA AAT TATATTAGC            TTTTTGGCCATGTTG  62 25
        secG  362646 ..  362675 +  -8.7  -3.42366   CAGATGGAGAAGAAA       TCTCTAGCGAA TAGAAAGC TTCGCTAGAGG        TTATCGACTTTTACC  75 12
         def  363597 ..  363614 + -11.3   -3.8637   TTTGAGGTAAAAGAA             GAAGCGG TTAT CCGCTTC              TCTTTTCTCGTATAC  90 154
  CPSIT_0353 NONE
        rpsU NONE
        dnaJ NONE
  CPSIT_0356  380260 ..  380274 +  -6.4   -2.5294   AGGGTCCGTAGGCGA               TCTCTC CAG GAGGGA               ATGTTCTAGAACCTG  54 453
  CPSIT_0359 NONE
  CPSIT_0360 NONE
  CPSIT_0361  385597 ..  385610 +  -2.4  -4.77036   GCTGATCCCACTAAA               GAAG GGGAAG CTTC                TTTTTGATGCTGAAC  64 396
  CPSIT_0364  389630 ..  389659 +  -3.5  -2.90345   TGACCACATAGTGTA       G-AAGGTGCTTCGG CAT TCGGGGCACCTGGC       GTTTGGTGTAAAGTT  44 213
  CPSIT_0372  394710 ..  394722 +  -4.9  -4.11664   CTGTAGGGATTCCCA                TTTCT TAA AGAAA                TTTCCTTATTGTAAA  64 18
  CPSIT_0373  396692 ..  396703 +  -2.2  -3.61398   TGGTGATTTTTGTTT                CAGG ATCT CTTG                 TTGTTAGAGGCGAAA  47 102
  CPSIT_0374  397448 ..  397460 +  -3.5  -2.64218   AAGAGTTAATAACTT                TAATT TAA AATTA                CTTATGCTAAAAAGT  43 58
        accD NONE
  CPSIT_0376 NONE
  CPSIT_0377 NONE
  CPSIT_0378  400133 ..  400154 +  -3.7   -3.2963   TTGTTGTTATGGTGA           TCTCATAGG CTGA TCTAGGAGA            TTATAGCAGCATGAT  49 92
  CPSIT_0379  401699 ..  401726 +  -3.6  -6.55664   TAATTAATTCTGGTA        GGATAATTAATT ATAT AATTAATCATTC         TTTTTTTTTGTTTTA 100 156
  CPSIT_0380  403592 ..  403611 +  -4.2  -3.96148   GGATTTCTTTCTATC            CAGCTGGA CAAC TCTTGCTG             TTTATCATGCACCAG  57 148
        trmU  406130 ..  406143 +  -2.4  -4.82901   TCCAAATGGATGATT               TCAG ATAACG CTGA                TTTTTCTAAAGGACG  64 313
  CPSIT_0386 NONE
  CPSIT_0387  410704 ..  410724 + -11.3  -2.82742   TGACCATCCTATTGG            GAAAAGAGA ACT TCTCTTTTC            TGGTTCTCAGGGGAT  83 49
  CPSIT_0388 NONE
  CPSIT_0389  413242 ..  413252 +  -2.6  -5.09426   TTCAAAAAAATATTG                 TATA GTT TATA                 TTTTTTGAACTTGGA  69 53
  CPSIT_0390 NONE
  CPSIT_0391  414020 ..  414038 +  -2.2  -4.62054   TTTTTGTCTTGCCGG             CGCGTTGC TGA GCTGAGCG             TATTTTTTTTATCGG  61 73
  CPSIT_0396  419045 ..  419058 +  -5.3  -3.28708   GAATAATTAGAATGC               GAAGA TGTT TCTTC                TTCATATAACGTTTG  54 517
        mraW NONE
  CPSIT_0402 NONE
  CPSIT_0403  425285 ..  425298 +  -5.3  -4.58395   GTGGTTGCGTATACA               TCCTA AGCG TAGGA                TTTTTGGGAAATAGC  71 361
  CPSIT_0406 NONE
  CPSIT_0407  428207 ..  428223 +  -2.3   -3.9281   TAGATATGATACGCA              TATACTT CAA AAGTTTA              TTATTTAGGGCTACT  52 347
  CPSIT_0410  428616 ..  428658 +  -5.7  -2.96752   CTTTTATCTAATTTA TCAGGGTCAAGTTTTTAGG ATTTA CTTAGAGGCTTGACTCTAA AGTTTTTTGTTATTA  54 55
  CPSIT_0411  429892 ..  429904 +  -3.5  -5.75945   TTTGAAAAATGCAAT                TAATA GTT TATTA                TTTTTTTTCGAAAAT  82 23
        accA NONE
  CPSIT_0413  432930 ..  432946 +  -3.7   -3.1211   GAAGACCTGTAGACC              TGCTGTA GGA TAGAGCA              TTCGATAATGTCGTA  48 46
  CPSIT_0419  437536 ..  437554 +  -5.2  -4.59081   CGCCCCATTTTCTTC             CTGCTTCC CAA GCGAGCAG             TTTTGTATCACTTTC  71 281
  CPSIT_0421  440734 ..  440754 +  -2.5  -3.14686   TAATGAGAGAACGGA            AGAGCATCT GTT ACATGCTCA            CTTTCTTAAATTCAA  43 123
  CPSIT_0422  442762 ..  442774 +  -3.4  -5.07652   TCCAAAAGAAGAAGC                GGTA ACCTC TACC                TTTTCTTTTGAAAAA  72 69
        mutY NONE
  CPSIT_0425  445226 ..  445245 +  -4.3  -3.65109   GAAGTGTTTTCTTTT            GCTAGGAG TGTTT CTCC-AGC            TTACTCTTTTTCTCT  55 169
  CPSIT_0433  450639 ..  450656 +  -4.1  -3.03635   ACCATAGTGTTAGTC             CGAATAC AATA GTATCCG              TCTTAAGGAACTTTG  50 14
  CPSIT_0434  452233 ..  452245 +  -2.6  -4.42062   GGTTGTGAATTAAAG                CGTC ATCAG GGCG                TTTGTTTACAAAATC  60 469
        ruvB  456789 ..  456799 +  -5.4  -2.96366   AGATATTGAAGTACA                 TCCT TTT AGGA                 CTTTCCTTCAGTATG  54 41
  CPSIT_0441  457724 ..  457745 +    -3  -2.69545   TTCTCTCTTAAGTTT           GGTAGATG TACTTC TATCTGCC            CTTCTCCTGTATAGA  41 164
  CPSIT_0443  460225 ..  460235 +  -4.6   -5.4251   TAACTTCATCCAGGG                 TGCG TCA CGCG                 TTTTTTCTATATGGC  82 45
         ssb NONE
  CPSIT_0445  462905 ..  462941 +    -6  -4.70613   CTTCTGATTTAATAA    CGCGAATTTGTTTTTA ATTTA TTAAAATAAATGCGCG    TTTTATTAAAGTTTT  77 56
  CPSIT_0446  463637 ..  463666 +  -5.9  -6.28967   TTAGGCGATGGTGAA       CGGTAAGAAGAT AGAATAG ATC-TCTTACCG       TTTTTTTTGTTTATA  95 53
  CPSIT_0447 NONE
  CPSIT_0448  465545 ..  465561 +  -6.6  -3.60818   TGTTCAGATTTCATA              GAAGCA TGCTC TGCTTC              TTTCGCGAGTTTTGC  64 157
  CPSIT_0451  467439 ..  467459 +  -9.8  -4.17048   TTAAATTATGAACAA            GGCTAAGT AATGA ACTTAGCC            TTATTTTAGCAACAG  93 37
        sucA NONE
        sucB  474503 ..  474522 +  -4.3  -5.29782   ATCTAGGAAGAAGAA            GAACAGC AGTGAC GTTGTTC             TTTTTTATAGGTGTA  79 53
  CPSIT_0467 NONE
  CPSIT_0468  484737 ..  484749 +  -4.9  -3.65671   GCGGCTTTATCTGCT                TTTCT TTA AGAAA                TTCTCTCTGGTTGTG  57 17
        tyrS NONE
         gnd  488116 ..  488138 +  -7.8  -3.40639   TCGATAAAAGCAGTG           TTTGGAATAG AGA CTTTTCCAAA           TTCCTTCATCCGCTT  66 259
  CPSIT_0473  491454 ..  491477 +  -9.6  -5.09204   TAAAGACAAAAAAAA          TCCTCACCTG TTTC CAAGTGAGGA           TTTTTGTTAAGATCT 100 57
  CPSIT_0476 NONE
  CPSIT_0477 NONE
  CPSIT_0478 NONE
  CPSIT_0479  498389 ..  498402 +  -2.4  -3.86495   ACAGAATTGACAACT               CTCT AACCTA AGAG                TTATGATTTTTTTAA  50 20
         dxr  499611 ..  499621 +  -3.2  -3.67068   ATATATTTCATTCTC                 GCAG CCC TTGC                 TTTGGGGGTTTTAGT  50 62
  CPSIT_0481  501510 ..  501526 +  -3.7  -4.56187   GAGAGCCAAAACAAT              GGATAAT ATA AATATCC              TTGTTTTTGCTTGTA  66 80
        smpB  505371 ..  505382 +  -5.8  -3.54029   AAGAGAAATAGCATC                CGCT ATGA AGCG                 TTATCGTTAATAAAG  62 4
  CPSIT_0489  508385 ..  508407 + -13.5  -6.55664   TTCGTTAGGTTTTTT           CGCAAGGTG GGTAA CACCTTGCG           TTTTTTTTTCTTTTA 100 254
  CPSIT_0490 NONE
  CPSIT_0491  510842 ..  510852 +    -4  -3.30124   GTTTATTCAATTGTT                 TCTT TGT AAGA                 TTATCAAGAATCAGC  50 147
  CPSIT_0500  522119 ..  522133 +  -4.3  -5.18866   GGCTTGAGATAACAT               TTCTC GAGAA GAGAA               TTTTCTTTCTTTGCG  80 81
        trxB  530919 ..  530949 +  -8.3  -2.80016   TAAATTAAAGCTATT       GCCATAGCTGTGG CGTAC TCACGACTATGGC       TGATTGATAATAAGA  67 33
         lgt NONE
        yidC NONE
  CPSIT_0512  537016 ..  537028 +  -2.7  -4.15854   AATGTAAGAAATGTT                TAGCA GAT TGTTA                TTTTCAGATCAATTT  55 418
        glgP  540069 ..  540084 +  -2.6  -4.34402   AAAGATTGAGATTTC              GCTTTAG AAG CTA-AGC              TTTTAATCTCGGCAG  60 398
  CPSIT_0520  544272 ..  544310 +  -3.3  -3.53262   CTATAATTCTATGAA  GGGGTTATTTGTA-ATTC TTCA GATTGTGCAGATAATCCC   TTAACTTTTTCTTCT  50 35
        fabH NONE
        fabD NONE
        fabG  551974 ..  551987 +  -3.1  -2.53213   ATGACATACTAAATA               GGTTG CAAA CAATC                TAGATTGAAAAATTA  42 29
        acpP  552419 ..  552434 +  -6.2  -4.36778   TGACTATTTTCTTAA              TGCATT CAGG AATGCA               TTTTAGATTATCTTT  72 128
  CPSIT_0535  561201 ..  561217 +  -2.3  -3.06183   AACCTTCAACAGTAG              TATAACT TAG GGTTGTA              TTCGCTAGGAATAGA  42 187
  CPSIT_0536 NONE
        mgtE  564902 ..  564912 +    -4  -4.27007   TTTTGATCAACTTCA                 TAAG GTT CTTA                 TTTCTTCAGTATTTC  59 55
  CPSIT_0538  566489 ..  566501 +  -6.3   -3.6284   AAACACAAAAAGCAG                TCCTT AAA AAGGA                TTTAAGGTACTACTT  64 94
  CPSIT_0541  571113 ..  571134 +  -3.8  -3.53733   TATCATAAAACATAT           TTCTGTTA TTTTAT TAACAGGA            TGTTTGTGGAATGGG  52 33
  CPSIT_0542 NONE
  CPSIT_0543 NONE
  CPSIT_0544  573790 ..  573823 +  -7.5   -3.3014   AGAGTTGATCTACCC     CGTTGCCA-GTAGGTT TAA GGCATACTTGGCAACG     ATTTCTTGATTTTTT  67 63
  CPSIT_0545  574510 ..  574531 +  -5.2  -4.06419   TTTTTATTAAGAACA           CGACATGA GTAAGG TCATGTTG            TTATTTATAAAAGAC  63 151
  CPSIT_0546 NONE
        gyrB NONE
        gyrA NONE
         tmk NONE
  CPSIT_0550  581451 ..  581464 +  -2.4  -3.86795   ATTGAACGTACTTGT               CCAT AGGGGA ATGG                TTTCCTGCATTTTTT  50 20
  CPSIT_0553 NONE
  CPSIT_0554  584292 ..  584312 +  -8.2  -2.52896   AGATATATAAAAAAA            CCCGAAGC ATTGC GCCTCGGG            TCCATTAAGAGATAC  66 31
  CPSIT_0558 NONE
  CPSIT_0559  589317 ..  589330 +  -5.3  -3.46824   CCAATCCAGCTTAAT               TGGTA CGTT TACCA                TTGATTACTTCATGA  57 27
  CPSIT_0565  593059 ..  593069 +  -3.2  -3.39483   TTTCTCTTCAAGCAA                 TAGG GTT CCTG                 ATTTTTCGCTGGAGT  48 75
  CPSIT_0568 NONE
  CPSIT_0569 NONE
  CPSIT_0570  595908 ..  595931 + -11.8  -3.08812   AATATACTCAACTTT          TGCCCGG-GAA TTA TTCTCCGGGCA          CTTTGTTCACAACAC  85 40
        rpmG NONE
  CPSIT_0573 NONE
  CPSIT_0574  600015 ..  600026 +    -3  -3.60104   AGAGAAATCATAGGT                TCAT ATAA ATGA                 TGTTTCTCATCTGAA  48 248
        rplM NONE
  CPSIT_0577  602421 ..  602435 +  -7.2  -3.75845   TAAAAGCTTCCAATT               CTCTAA ACG TTAGAG               TTTGCCGTTATTTTC  70 13
  CPSIT_0580 NONE
  CPSIT_0581  606086 ..  606096 +  -6.8  -2.90508   TCTTTAAATAATAAA                 GTGG AGT CCAC                 TAATTATGTCAGTTA  58 172
  CPSIT_0582  607274 ..  607288 +  -4.3  -3.89346   TATAGGGTAGGCAAA               CTAGA GAATG TCTAG               TTTGTGGAATGAGGA  57 64
        argR  612914 ..  612925 +  -4.4  -3.79747   TTTTTCTGATTAATT                GCAT GATT ATGC                 TTTAATCGTAAATAA  57 28
  CPSIT_0588 NONE
  CPSIT_0589  614298 ..  614316 + -13.2  -3.17054   TGGTGGGGAGATATA             CAGCTGCT CAT AGCAGCTG             TTGCATGATTTAGTA  91 41
         rpe NONE
  CPSIT_0596 NONE
        accB NONE
        accC  626136 ..  626158 +  -6.4   -3.6445   TCTTCTTTCCCAGGG           GAATTCCTTA TTC TAAGAAATTC           TTTAAAAGTTCTTGT  64 10
  CPSIT_0599 NONE
  CPSIT_0600  629684 ..  629696 +  -5.5  -2.71011   CGACGGCTAGTGTCA                GGCGT TGA ATGCC                TAATTAAACGACCCT  51 282
  CPSIT_0607  645909 ..  645930 +  -7.4  -4.27617   AAGCTTGGTGTCCCA           GTTGTTCA ATTGCG TGAACAAC            TTTTGATGAACTATG  81 90
  CPSIT_0608  649114 ..  649124 +  -5.4  -3.36175   AATCGGTCTACTCTC                 TCAG CTA CTGA                 TTCTAAATACCCATT  56 414
  CPSIT_0616  655575 ..  655587 +  -4.1  -3.34222   AAGCGATTTGAGGAG                TGCAT TAA ATGCG                TTCTAAAATCATGGT  53 30
  CPSIT_0617  656631 ..  656657 +  -9.5  -4.71426   TGCATCCATTTGTTG         AAAAACCTCGC TACTC GCGAGGTTTTA         TTTTATTGCTCCCCC 100 58
  CPSIT_0618  657359 ..  657373 +  -7.2  -3.37354   ACTTATTGGGTGTAT               CAACAA ATC TTGTTG               TTCTAGATAAATCTA  66 1
  CPSIT_0619 NONE
  CPSIT_0620  659016 ..  659033 +  -4.9   -2.7806   ATGGTAATATAAAAA             TTCTTCT GTAC AGGAGAA              GTTTGGCCATTTCAA  51 42
         tgt NONE
  CPSIT_0622 NONE
  CPSIT_0623 NONE
  CPSIT_0624 NONE
  CPSIT_0627  665486 ..  665496 +  -5.4  -4.05193   AAAGAAGGCACTCCT                 GAAG ATG CTTC                 TTCTTGTCTTTGCTC  65 66
        kdsB NONE
        pyrG NONE
  CPSIT_0636  672065 ..  672086 +  -2.2   -3.6944   ATAAAATCAATGTAG           CACAGTGG AATAAG TCACAGTG            TCTTTCTGTTAAAAA  47 237
  CPSIT_0638 NONE
  CPSIT_0639  675152 ..  675163 +  -4.4  -2.87211   TGAACTTAAAGACGT                GGAA GTTC TTCC                 TATATAACGCAGCCT  48 424
  CPSIT_0640  676985 ..  676995 +    -4  -2.56773   ATGCACATCTTATAA                 GTTT AAA AAAC                 GTCTTGGGTTTTTAC  45 42
  CPSIT_0641 NONE
  CPSIT_0642 NONE
  CPSIT_0643 NONE
  CPSIT_0644  680816 ..  680826 +    -4  -3.68619   TACTGCGATCCACGT                 TCAT TTT ATGA                 TTTGCCTGAATTAGA  52 109
  CPSIT_0645 NONE
  CPSIT_0646  683257 ..  683286 + -14.5  -3.67597   CCTCAAACGGCGAGA       GGGAAAACCTTCT AAAA AGAAGGTTTTCTC        TTATTCGATAAAGAA 100 48
  CPSIT_0647  685053 ..  685063 +  -2.6  -3.17392   ATTCTCGACGAATTC                 TTTT TAA AAAA                 TTAAATTCACGCATA  45 88
  CPSIT_0648 NONE
  CPSIT_0649  687978 ..  687990 +  -4.1  -3.48276   AAATGTGATCACTTT                GACTA TAT TGGTC                TTGTCTAAACAACAA  52 443
  CPSIT_0654  692878 ..  692888 +  -5.4  -3.18655   CATCAGATCCTTTTC                 CCTA TAC TAGG                 ATTTATTCGTGTCTT  55 132
  CPSIT_0655  694590 ..  694601 +  -2.2   -3.5721   GCGTAACTTTTTCTT                GAGT TAAT GCTC                 GTTTTCTTTCCTGTA  47 173
      pmp19G  710073 ..  710102 +  -9.9  -2.74987   CTAATCTCATCCACC       TCCCCTGCTCCGT ATGT GCGGAGCAGGGCC        TCCCTTTGTCTATCC  75 37
      pmp20G  712719 ..  712735 +  -5.1    -4.371   CCTATAATGTAGATC              TCGGATC GAA GATCCAA              TTTTAATCTCATCCA  67 3
      pmp21G  715457 ..  715479 + -10.6  -3.24232   TCACGGGGTAGGGCC           TCCTCAGCCT GTT AGGCTAAGGA           TCTCTTTACAACACG  83 67
  CPSIT_0683  730450 ..  730471 +  -4.5  -4.93696   CTTGGCTTTTTCTTA           GAACTTAAT TTAT AGTAAGTTC            TTTTTACTATTTCAA  73 65
        pepF NONE
       groES NONE
        groL  734485 ..  734520 + -14.1   -5.1417   TCTCTATTCTTACAA    GGTCTCCCTTCATCT ATCTCA AGAAGAAGGGGGACC     TTTTTCATTTTGTAA 100 62
  CPSIT_0687  735548 ..  735574 +  -4.4  -2.60075   AGTAGCTCAGCGGTA         GAGCAGTGGACT GTT AATCCATTGGTC         GTTGGTTCGAACCCA  47 182
  CPSIT_0689  737240 ..  737252 +  -5.5  -2.63913   GATGAATAACTTTGA                GTCAC GCT GTGGC                TAATGTGGAATGATG  51 32
  CPSIT_0691  739161 ..  739178 +  -2.7  -3.56541   CAACAAAGCTCTTCC             CTTTGTT GATT AACCAAG              TTGTATACTCATGGT  48 13
  CPSIT_0692  742224 ..  742238 +  -4.3  -2.83715   CACAGCATGCCTTAC               GTAAG CTGTA CTTAC               TATAATGCTCCTGAG  48 375
  CPSIT_0704  752024 ..  752034 +  -6.8  -4.09864   CCACAATTCCGATTA                 GGGA AAT TCCC                 TTTTCGAACCTCCAT  71 250
        lepB  754006 ..  754031 + -14.1  -4.64844   AGAAAAAATAAAAAA         GAAGACTCTCC TAAC GGAGGGTCTTC          TTTTCTCTATGTAGA 100 30
  CPSIT_0707  758473 ..  758490 +  -5.5  -2.72511   GCAACTATAAAATAG             TTGCAGC CGCA GCAGCAA              GTTTAGAGCGCTCCG  51 31
  CPSIT_0709  760834 ..  760848 +  -2.8  -3.03701   GCTGTTCTCTATACT               TAAGGT TCT ACCTAA               TCTCGTTTGGTAAGA  43 23
  CPSIT_0710  762546 ..  762577 +  -3.9  -3.61988   TCATAGCTGCGCCAG     GGAAGGTTCTTGAGT TTTG AC-CAAGAGC-TTCC      TTGATTTGTCGATAC  54 364
  CPSIT_0714 NONE
  CPSIT_0715  768145 ..  768167 +  -4.9  -2.56601   GTGTCAATGCGAACG           GCTCATTTA ACTAC TAAAAGAGC           GTAATTTTTCATAAA  49 138
  CPSIT_0716  769592 ..  769607 +  -2.6  -4.44676   AAAATTCTTAACTTC              CAAAAG AGTT TTTTTG               CTTTTTTTTTTGATT  58 30
  CPSIT_0717  770464 ..  770490 +  -4.4  -3.99324   GCATGATTTTCACAG         CAGCTATAGG ATGACTA CCTGAAGCTG         TTTCTCCTGATAGCA  61 521
        uvrA  777252 ..  777263 +    -3  -3.67175   TAAATTTCTTCTTTC                TTGA TAAC TCAA                 TTGGTTTTCACAAAT  50 137
  CPSIT_0730  792227 ..  792259 +  -4.9  -5.07486   CTTATCTTCTTTAAT      TTGCCTTACAGTATT GTT GAAACTTTAAGGCAG      TTTTTCTTACACATC  77 436
  CPSIT_0745 NONE
  CPSIT_0746  808404 ..  808414 +    -4  -4.17089   TAGCAGAAGCCTACT                 TAGT TAA ACTA                 TTTTCCAGATTTAAC  59 451
  CPSIT_0749  811072 ..  811086 +  -4.2  -3.55191   CGCTCAAATATCTAC               CGATGG TAT CCATAG               TATTTATCGCCTTCC  55 11
  CPSIT_0758 NONE
  CPSIT_0759 NONE
  CPSIT_0760 NONE
  CPSIT_0761  823023 ..  823034 +    -3  -3.83844   CATTTTTCAACAAAA                GATA AGCG TATC                 TTATTAATTCGTGCA  52 147
        bioB NONE
  CPSIT_0763 NONE
        bioD NONE
        bioA NONE
  CPSIT_0766  827840 ..  827883 +  -4.6  -3.41126   GAAATTAGTGTTCAG GCAAGCTTTTTGGAAAGC AAAAATAA GTTAGCCAAAATGCTTGC TTATAAGATTTCTCC  53 73
        aroA  829221 ..  829243 +  -4.2  -3.05266   CTCGCTAAATATTTT           TCGACATC TTTCTTC GATGTTGA           TGATTTAATTGTCAT  50 33
  CPSIT_0768 NONE
        aroC NONE
        aroB NONE
        aroE NONE
  CPSIT_0772 NONE
  CPSIT_0774 NONE
  CPSIT_0775 NONE
  CPSIT_0776  837709 ..  837732 + -10.3  -4.15473   ATCCAATCACCCTTG          GGGAGAGGC CCTTGC GCCTCTCTC           ATTTTTTTTAGTTCC 100 48
  CPSIT_0777 NONE
  CPSIT_0782  844285 ..  844305 +  -5.4  -2.90714   CTACATGCCGCGAAG            CACTGGAT CCTAA ATCCAGCG            TGTCTACCAATTTCA  52 436
  CPSIT_0785 NONE
  CPSIT_0786 NONE
  CPSIT_0787  848029 ..  848043 +  -3.6  -3.21593   AATCTCTAAGGTAAA               TTCTTT TGT AAGGAA               TGTTATGACAGCATC  49 27
  CPSIT_0788  849773 ..  849783 +    -4  -3.54755   CTTGAGACAACGGTG                 TTTC ATG GAAA                 TGTTCTTTCAAAAAT  52 266
        sulP  856839 ..  856861 +    -2  -3.44146   GTTGGGTTGATCTTC          CCGGGCATT ATCGAA GAT-CCCGG           TTCATTCTCAGGAAA  45 446
  CPSIT_0795  859743 ..  859760 +  -7.1  -2.75064   GTCTTTTTGATAGGA             TTGCAAA CGCT TTTGCAA              TACTTCAATACCAAC  61 87
  CPSIT_0796 NONE
  CPSIT_0797 NONE
         map  862502 ..  862521 +    -5  -4.53703   TCTCAATGTCTCTCA            TGTCTGTG AAGA CAGAGACA             TTTTCCTCTTGTTTT  71 86
  CPSIT_0802 NONE
  CPSIT_0803  865187 ..  865206 +    -5   -3.9941   AACATTCTCACAAAT            TGTGAGCT TGAT AGCTAACA             TTTAATTATAAGGAA  62 1
  CPSIT_0804  865837 ..  865847 +  -6.8  -2.79452   AAGAATCAGGTCAAA                 CCTC TAT GAGG                 GTTATCTTCCCAGAT  58 101
  CPSIT_0805  866872 ..  866889 +  -5.7  -3.15544   ACCTGATGAAATGGA             TGTTTTT CTTT AAAAACA              TTGATCCAACTCCCC  54 348
        rpsO NONE
         pnp  869943 ..  869959 + -13.7  -4.14739   AAAAGACAAAAAAAA              GCCCCGA ATT TCGGGGC              TTTTCACATCAGTAC 100 82
  CPSIT_0812  875035 ..  875053 +  -2.5  -3.56099   CGAGAAAATAGGGGT             TATGCAT AAGTC ATGTATA             TTTGGAAACGTTATG  48 17
  CPSIT_0813  876130 ..  876142 +  -6.3  -3.17456   ATATTCACAAACTAT                GCTTA TGC TAAGC                TTCAATAATTTCATT  61 5
        nusB NONE
        murB  882793 ..  882803 +    -4   -5.1963   GACATCTCTTTAAAT                 TCTA TAA TAGA                 TTTTTCTTCATTAGA  78 346
  CPSIT_0827 NONE
  CPSIT_0828  890765 ..  890778 +  -5.3  -3.91084   TACTTCTTCATAACA               GAACA GATA TGTTC                TTTAGTTACAGCTAA  61 156
  CPSIT_0830  895081 ..  895099 + -13.2   -3.9377   CAAAAGCACAAAAAA             GCACTCTC TAA GAGAGTGC             TTTCATTAAAATTGT 100 15
        ftsY  899909 ..  899922 +  -2.5  -3.50746   GCAAAGCTTTTCCCT               TAAAA GATA TTTTA                GTTTCTTTTTGAGGA  47 23
        pcnB NONE
        lpxB  908945 ..  908957 +  -6.3  -3.83768   GAAGAATGTTAGGCC                GAGTT TTT AACTC                TTTCAATGTTCTTTT  66 16
  CPSIT_0853  921959 ..  921973 +  -2.2  -3.41222   AAAAGACACTAACAA               TTTTTG AGT TAAAAA               TCTTTAAACTTCAAC  45 68
  CPSIT_0854  924966 ..  925001 + -11.3  -3.63744   CACAGCCTCTTGAAG    CTAAGGCAACATAAC CCCACA GTTGTGTTGCCTCAG     TCTTTTACCCCAAAC  90 60
  CPSIT_0855  926644 ..  926667 +  -9.6  -5.37593   AACAGTAAAAAAAAA          GCGCTGTG TGAGGTTT CACAGCGC           TTTTTTGATTTCACA 100 54
  CPSIT_0860  934879 ..  934890 +  -4.4  -3.53791   AGTATTGAGTTATAG                GCAT GGTT ATGC                 ATTTTTCTACCTATT  55 26
  CPSIT_0861 NONE
  CPSIT_0862  939112 ..  939122 +  -5.4    -3.406   ATCCTACAAAGCACA                 CCTT AGA AAGG                 TTGATTGCGTGTTGA  56 443
  CPSIT_0864  940497 ..  940535 +    -6  -2.55484   CAATGCTCAAACCAT   CCAGTGTATTTGCGTAAG CTA TTTACGAGCATACCCTGG   CTATTGTGGATAGTT  54 48
        glgA NONE
  CPSIT_0875  949561 ..  949590 +  -6.6  -4.43844   TGTAGCAAAAAAAAA      GTGGCC--TGATAG ATTC CTATCAATGGCCAC       TTTTCTCAATCCTAA  74 49
        mutS  956487 ..  956498 +  -2.2  -4.11692   CAAGAAAAAGAGCTG                CAGC TCAC GTTG                 TTTTGACCATGCGTG  54 8
        uvrC  958613 ..  958634 +  -5.3  -3.02023   ACTAAATGATTTTTA           GAATCT-TGT TCT ACATAGATTC           CTTTCATTCTCTCGA  54 185
  CPSIT_0883  959702 ..  959713 +  -4.4  -5.75599   TTTTTGCAATTTTGC                GAAG CTCA CTTC                 TTTTTTTGTAGTTTG  95 306
  CPSIT_0887  961964 ..  961978 +  -3.6  -3.91897   GATTAAATAATCATG               TATTTC TTA GGAATA               TTTATGCGTAAAACC  57 35
        cysS  963753 ..  963765 +  -4.1  -2.60486   CCTGTGGGAGGTAAA                CCTTG GCA TAAGG                CTTCTAAAAATTCTT  45 149
  CPSIT_0891 NONE
        priA  969366 ..  969382 +  -3.7  -3.76167   TAGCGTAATGGTGGG              GAGTTTA ACA TCAACTC              TGTTTTCACTTCTGA  55 363
  CPSIT_0895  973591 ..  973619 +  -4.6  -5.19328   GTTTCTGAAGAAAAC        TTGCTAGCTTAC TAAAT GTAAGCTGTCAG        TTTTTCTTCTACAAT  76 11
  CPSIT_0897  975480 ..  975498 + -13.2  -3.33911   ATAACCAATGTTTCT             GGAGAGGA GGC TCCTCTCC             TTACATTCTTTAACT  93 37
  CPSIT_0903  981251 ..  981261 +  -5.4  -3.28712   AATTTTTGTTTAACC                 GCTT CAT AAGC                 TTCTGCGGGAGAACC  56 173
  CPSIT_0906 NONE
  CPSIT_0907  983711 ..  983734 +  -3.2  -5.42862   CTTTTCAGGAACTTT          GAATGATACA TAAG TGTTTTATTC           TTTTTTTCCACATCT  77 65
  CPSIT_0908  984239 ..  984266 +  -9.2  -3.06737   TAGAGTTTGGCAATA        GCTAAAGACCCC TTGC GGAGTTTTTAGC         TCTTCGCAGTTAATA  74 68
  CPSIT_0917  995323 ..  995351 +  -7.6  -3.55815   TAAGAAAAACCTGAC        TCAGTACTATAA GTCTA TTTTAGTACTGA        TTTCCGGAAATATTT  71 171
  CPSIT_0918  996479 ..  996508 +  -8.7  -2.84317   AAAAATAGAAAAAAC       TGTGTAGAAAGGCT AGA AGCCTT-CTTCACA       AATTTTTTCTGCAAT  69 64
  CPSIT_0921  998807 ..  998817 +    -4  -3.48884   CCTCGGCCGACACCT                 TCTT TAA AAGA                 TCTATTTGTTTGCGA  52 410
        alaS NONE
         mfd NONE
  CPSIT_0925 NONE
        hemN NONE
        hemG 1010269 .. 1010283 +  -2.8  -4.00683   GATCTAGGAGATGTT               GAGTTA GCT TATCTC               TTTCATTAAGTTTTT  55 136
        hctA 1013440 .. 1013471 +  -4.6  -5.40873   CTTGTCTTGGTTTTT      AGAGGGTAA-TTATA TTT TATAACTTGCCCTCA      TTTTCTTTTTCTCTT  82 48
  CPSIT_0930 NONE
        yajC NONE
        nqrF NONE
  CPSIT_0940 1027398 .. 1027410 +  -3.4  -2.70354   CTTAATACAAATACC                TCCT CAAGA AGGA                TGAGTTTATGGAAGG  43 10
  CPSIT_0941 NONE
  CPSIT_0942 1029024 .. 1029034 +  -4.6   -3.1506   TGCTGTCTATCTGGT                 GGGC AGG GTCC                 TTCATAGCAAGCTTT  51 184
  CPSIT_0947 1033076 .. 1033103 + -11.4  -2.91199   TTTGAATGGTTCAGT        TAGCGTTACACT TTAA AGCGTAACGCTA         TGTACTTACAACTTC  83 10
        serS NONE
  CPSIT_0952 NONE
        cadA 1040661 .. 1040672 +    -3  -3.35679   CATAAGGTTTTACCT                TTTC ATGA GAAA                 TTATCCCTGAGAAAA  46 523
  CPSIT_0955 1042408 .. 1042418 +  -5.4  -3.60525   ACTACAAAGACGAAT                 CCTA TCA TAGG                 TTATATATCGCTGAC  58 519
  CPSIT_0958 NONE
  CPSIT_0959 NONE
  CPSIT_0960 1045998 .. 1046011 +  -3.9  -5.52384   ATGTTAATAACACTA               TAATG ATTT CATTA                TTTTTTTCCTGAGGA  79 96
  CPSIT_0961 NONE
  CPSIT_0962 NONE
  CPSIT_0963 NONE
  CPSIT_0964 NONE
  CPSIT_0965 NONE
  CPSIT_0966 1051721 .. 1051734 +  -2.4  -4.62475   TCCTTAGATAGAAGC               CTCA TCCTAC TGAG                TTTTCATTTGTACAT  59 69
  CPSIT_0967 1053274 .. 1053287 +  -5.3  -4.64657   CATCAGTAAGCGTGT               CATTC CCCT GAATG                TTTTTAGAAATTTGC  71 456
         tig 1064522 .. 1064559 +  -2.8  -2.78032   TGTGTATTGTTGGAA   TTGCTTTTCCGCGT CTGAGTATGT ATGCGGGAAAGAAA    CTATTTTGAGAGGAA  42 145
        clpP NONE
        clpX NONE
  CPSIT_0978 NONE
        engA 1069269 .. 1069280 +    -3  -3.55563   AAAAAACGAAAAGAA                CAAA TTAA TTTG                 TTTAAAAAATGAAAT  50 18
  CPSIT_0980 NONE
        trmE NONE
  CPSIT_0985 1077550 .. 1077568 +  -4.6  -4.13767   AATGAAATTTACTTT             GCTTTCTA ACG TAGAAATC             TTTTAGACTGGGCAC  62 87
        brnQ 1078827 .. 1078837 +  -3.2  -3.22656   CCCTCTCTCTTACAA                 TCGT TTT ACGG                 TTGGTGAGTTGAGTT  47 3
  CPSIT_0987 1082481 .. 1082491 +  -5.4  -3.18832   AACACCTCAGAAGAA                 GATG AAG CATC                 TCTATTCTAAAATTA  55 5
        lpdA NONE
        lipA 1085608 .. 1085622 +  -2.8  -4.45083   TTCTTAAAAGCGCTT               GCGTTT TTA AAAGGC               TTTTGTAGATCTAAA  58 66
  CPSIT_0991 NONE
  CPSIT_0992 1087640 .. 1087650 +  -5.4  -5.28481   GAACAAACAATAATG                 GAGA CTT TCTC                 TTTTTTCCTTGCATA  82 62
        sctL NONE
        sctR NONE
        sctS 1089688 .. 1089712 +  -2.8  -4.36378   AAATGGAAATAAACA          GCTATGGCAA TCTCT TTACCAGAGC          TTGTTTCTGTTTTTG  58 29
  CPSIT_0996 1091053 .. 1091068 +    -4  -5.16132   AAACTGAGAGGACGA              CTCTTT TGAA GAAGAG               TTTTCTTTTGGTGTC  74 518
  CPSIT_1009 NONE
  CPSIT_1010 1104076 .. 1104086 +  -2.6  -3.65902   CTGATAGACGTTAGC                 TTTA CAA TAAA                 TTTAGATAACATAGG  48 27
  CPSIT_1011 NONE
       copD1 1106979 .. 1107001 +  -9.2  -4.56358   TTAAGATAATCCAAA           GGGCTCAA ATGCATA TTGAGCCC           TTTTATGTAAATCTG  93 55
        thrS 1110018 .. 1110032 +  -2.8  -2.52623   GAAGAAAAGAACTCT               TTGAGT TTA ACTCCA               CTATTGTAGAAAACC  41 2
  CPSIT_1016 NONE
  CPSIT_1017 NONE
  CPSIT_1018 NONE
        trpS NONE
        uvrB 1115273 .. 1115299 +  -5.2  -3.69256   TCCCCGCAACCTCAT         TGTGATCATATG ATC CGTATGCTCATA         TTGTGTTAAATAGGT  59 110
         eno 1116647 .. 1116674 +  -8.5  -3.24289   ATAGAGTCGGGACGA        TCGCTTTCTTG TGATTT CTAGAAAGCGA         TTACCTCTTTAAACT  73 37
  CPSIT_1022 NONE
  CPSIT_1023 1120994 .. 1121004 +  -5.4  -5.31545   ACTTCTTTCCGATAC                 CCTT AAG AAGG                 TTTTTTGCTCTTGTT  82 404
  CPSIT_1025 1124198 .. 1124217 + -12.2   -2.7587   ACACACGCGAACACA            GTTGTGGG CTTG CCCACAAC             CTTCTATACCTTTTT  81 160
  CPSIT_1031 NONE
        exbD 1132108 .. 1132123 +  -6.2  -2.57211   TTCACGAACTCCATA              TAGCTT TAAA AAGCTA               ATTATGAAAAAAGCT  54 9
  CPSIT_1033 NONE
        tolB NONE
  CPSIT_1035 NONE
  CPSIT_1036 1135442 .. 1135458 +  -3.7  -4.17417   AATTCTTTTGTAGGA              TCGGA AATAAAG TCCGA              TTTATCTATAATTCA  59 92
  CPSIT_1037 1136371 .. 1136383 +  -2.7  -4.26777   TATTTACCACGATAA                TCTTT CAA AGAGA                TGTTTTTTACTTCGC  57 524
  CPSIT_1042 1140614 .. 1140627 +  -4.5  -2.77539   ATCTGCTTCTAAACT               TGCCG CTGC TGGCA                TGCCTTCTTTTCCTT  48 113
  CPSIT_1045 1143438 .. 1143448 +  -5.4  -2.56839   AATCCCTAGAGATTA                 CTTG ATT CAAG                 TACATTAGGTATGTT  51 7
        rpoN 1144726 .. 1144742 +  -4.5   -4.1466   AAGTACATTCACAAA              TGTAAAG CGG TTTTACA              TTTTAGCAATTAGGT  62 21
        topA 1148927 .. 1148941 +  -4.3  -3.98173   CCACAAAGTTTCCGC               GTTTC AGAAA GAAAC               TTTGCTTCACTTTGA  61 164
  CPSIT_1051 NONE
  CPSIT_1052 NONE
  CPSIT_1053 NONE
  CPSIT_1054 1154052 .. 1154064 +  -3.4  -2.79183   GTGAATTGTCAATAA                CACA CCCTC TGTG                TATGATGACAATCCA  44 130
        recA 1155639 .. 1155654 +  -3.3  -4.72272   AATCATTGTTAAGTA              GTGTT TCGATT AACAC               TTTTTCCTCACGAGC  67 255
        rpsT 1162895 .. 1162905 +  -2.6   -2.5294   TGCTACGAAACTTCA                 TAAT AGT ATTA                 GTCTTCTGGGAGATG  41 155
  CPSIT_1064 1163648 .. 1163669 + -13.1  -5.70829   AAAGAAGACGATCTA           CCCCATAAG TATA CTTATGGGG            TTTTTTTATGATCTT 100 52
  CPSIT_1067 NONE
  CPSIT_1068 NONE
  CPSIT_1069 1169682 .. 1169699 +  -3.3  -2.78912   TTTCTAAAGTATCCC             CTGCCGA GACA TCAGCGG              ATTCTATGTCTACTG  44 223
  CPSIT_1072 1169874 .. 1169888 -  -2.8  -3.11572   AAGCAATAAAAATAC               CAACCT CTA AGGTTC               CTGTAAACGTAAAGA  43 58
  CPSIT_1071 1169162 .. 1169172 -  -6.8  -5.64274   TCATTCATAAAAAAA                 CAGG AGC CCTG                 TTTGAAATCGCTTGT 100 437
  CPSIT_1066 NONE
        recD 1163304 .. 1163333 -  -4.9  -3.71687   GCAAAACATGCGAAA       GGTTTAGGCGGTA TTTC TACCGGCTTATCC        GCTATTAGTTCTGCT  58 323
  CPSIT_1062 1160993 .. 1161004 -  -2.2   -3.1552   GTCTATCCACGAAGA                GCAT CTAT ACGC                 ACCGGATAAAGAACA  44 1
  CPSIT_1061 NONE
        folB NONE
       folKP NONE
  CPSIT_1058 NONE
  CPSIT_1057 1156226 .. 1156244 -  -2.5  -3.17699   CAAAAGTTAAAATTA            TGTAGACT CCCA AG-CTACA             GAACGAAGCAAAGGA  45 4
  CPSIT_1056 1154960 .. 1154991 -  -2.3  -3.79687   ATCCGCGAGAAAATA      GGTGTAAGTTTCGG CAATC CCGAAACA-ACAAC      AGGCGGACGCGCTTT  51 497
  CPSIT_1049 1148541 .. 1148555 -  -4.2   -4.6856   GAAAGACTCCAAAAA               CCCCTA AAG CAGGAG               CTTTACTTACACCAT  69 255
  CPSIT_1047 1144308 .. 1144328 -  -6.9  -4.79075   AAAAACTTAAGAAAA            CGAGAACAA ACA TTGTTTTCG            ATTGTTGAGAAAATC  81 449
         ung NONE
  CPSIT_1043 1140212 .. 1140224 -  -2.7  -5.74122   GACCACAGAAAAAAA                CTTCT GCA AGAAA                TGCAATCTTTAGAAA  85 310
  CPSIT_1041 1138362 .. 1138379 -  -9.1  -2.61582   GATTCCAGGGATAAG             GCGACCC TATA AGGTCGC              TTATAGAAACAACAA  72 76
  CPSIT_1040 1136498 .. 1136512 -  -2.8  -2.78463   ATGCTTCGCACCAGA               GAGG ACTTGAA CCTC               TGACCACCTGGTTCG  42 205
  CPSIT_1038 1135425 .. 1135436 -    -3  -4.39329   ACTGTAGATAATAAA                CAAA TTCT TTTG                 TAGGATCGGAAATAA  60 458
  CPSIT_1030 1128662 .. 1128685 -  -9.7  -5.88197   TTAAAGACAAAAAAA          GGGTGTATT TGAATC AATACACCC           CAAATAGATTGTGTT 100 52
  CPSIT_1029 NONE
  CPSIT_1028 NONE
  CPSIT_1027 NONE
  CPSIT_1026 1123953 .. 1123966 -  -3.1  -3.39908   CCTCTGGAAAACATA               GACAA ACTT CTGTC                CGTAACACAACCCTG  48 119
  CPSIT_1013 1106979 .. 1107001 -  -9.2  -3.85509   TTAAGATAATCCAAA           GGGCTCAA ATGCATA TTGAGCCC           TTTTATGTAAATCTG  81 48
        mutL NONE
  CPSIT_1007 NONE
  CPSIT_1005 NONE
  CPSIT_1004 NONE
  CPSIT_1003 1094758 .. 1094773 -  -3.2  -2.90075   CCCTCCTTAATCATA              CCGTTT CGTA ACACGG               AACACTTCCGACAAA  44 1
  CPSIT_1002 NONE
  CPSIT_1001 1093113 .. 1093126 -  -4.5  -3.33315   TCAATACCTCGATAA               GCAGA AAAC TCCGC                TTTATCTTCTTTTTA  51 60
  CPSIT_1000 1092673 .. 1092686 -  -4.5   -4.3586   TGATGGATACCAAAA               CCTCC ATAA GAAGG                AAGGACCTTTTCTGT  64 54
  CPSIT_0999 NONE
  CPSIT_0998 1091159 .. 1091174 -  -3.4  -5.89827   AATTATCAAAAAAAA              TATTTA AAGA TAAATA               AGAAATTTTTAATTA  89 38
  CPSIT_0997 1090545 .. 1090562 -  -8.5  -3.05384   GCTTCTCGGATCCAA             CCCTAAA GTCC TTTAGGG              AGAACCATCTAAACT  71 114
  CPSIT_0988 1082481 .. 1082491 -  -5.4  -3.81848   AACACCTCAGAAGAA                 GATG AAG CATC                 TCTATTCTAAAATTA  61 58
         psd 1074411 .. 1074427 -  -3.1  -4.14318   AATACCAAAAAAAAC              CTTTAAA GTC TTTAAAA              TTATTCTCTCAAAGA  57 26
  CPSIT_0982 1072947 .. 1072960 -  -6.7  -4.64676   TTATGGTGAATAAAA               GGAAC AAAA GTTCC                CTCTCTTATATTCTT  76 102
        secA 1069910 .. 1069929 -  -7.1  -4.33808   TAAAGTAAGGGAAAA            GGCTGGA AGCTAG CCCAGCC             CTAAAGCTCTTGTTA  78 38
  CPSIT_0972 NONE
        mreB NONE
  CPSIT_0970 1056312 .. 1056324 -  -3.5  -6.34616   TTAAAATAAAAAAAA                TATTT CAA AAATA                AAAATAATTGTCGCT  95 81
  CPSIT_0969 NONE
  CPSIT_0968 1052413 .. 1052425 -  -2.7  -3.92577   TAAGTTTGAAAAAGA                TCCTT TGG AAAGA                TGGCATTTCTTTCAT  53 440
  CPSIT_0957 1042408 .. 1042418 -  -5.4  -2.70121   ACTACAAAGACGAAT                 CCTA TCA TAGG                 TTATATATCGCTGAC  51 65
  CPSIT_0956 1041625 .. 1041635 -  -5.4  -3.34455   GCATCACAAACGGAA                 CCAT AAA ATGG                 CCTAATGATGTTTTG  56 278
  CPSIT_0954 1039882 .. 1039898 -  -4.4  -3.28712   CCTGCTCTTGCACAA              GCAACA GTAGG TGTCGC              TATGGGAGAAGCAGG  52 294
        ribD 1034873 .. 1034885 -  -3.4  -3.08344   TCCAAATTACAGACA                CCTA CTCTC TAGG                AATGCTAATGGAAAT  45 73
        ribA NONE
        ribH 1033030 .. 1033042 -  -4.9  -2.88544   GTGGAGGTCTAGATA                TTTTC TCA GAAAA                TATTGCTGTACGTGT  50 92
  CPSIT_0945 1030737 .. 1030759 -    -2  -3.04144   TCTTTATTGCTAATA           GTGTTCTT TTAACGG AAGATCAC           AGCAAATTAGCTTGT  42 88
  CPSIT_0944 NONE
  CPSIT_0943 1028762 .. 1028781 -    -5  -3.44229   ATGTGATTATTAGAA            CGATTCAA GCAA TTGAAGCG             GGCGAAGAGTTATGT  54 114
  CPSIT_0933 1016585 .. 1016605 -  -4.8  -2.65442   AGATTATCTATACTA           TGTATGTGG TCCA CCAC-TACA            CAACAGTAGTATCCT  49 147
  CPSIT_0928 1009900 .. 1009943 -  -3.3  -4.49311   ATTACTATTAGAAAA CCGCTGGCATCAAGAAGAAGC TTTC GCTTTTTCTTTA-G-CAGCGA TTTCTGAGTATTTAG  64 211
         tkt  998078 ..  998095 -  -6.3   -4.1822   TGGGAGTTCAATAAA             GAGTTCC GAAA GAAACTC              TATGAAAATAAAGCA  71 346
         efp  996754 ..  996770 -  -3.7  -3.79874   TTTTACACAACAGAA              CTTCTTA TGA TCAGAAG              TTACTTGGAAACACG  55 26
  CPSIT_0919  996478 ..  996509 -  -7.4  -5.69068   GAAAAATAGAAAAAA      CTGTGTAGAAAGGCT AGA AGCCTT-CTTCACAA      ATTTTTTCTGCAATG  93 7
        murF NONE
        mraY NONE
        murD NONE
  CPSIT_0912 NONE
        ftsW NONE
  CPSIT_0910 NONE
        murC  984239 ..  984266 -  -9.2  -3.02829   TAGAGTTTGGCAATA        GCTAAAGACCCC TTGC GGAGTTTTTAGC         TCTTCGCAGTTAATA  74 21
  CPSIT_0905  982112 ..  982129 -  -3.3  -2.52464   TTCGCTTGGAATTCA             GGAGCAC GCAT ATGCACC              GGGGTTAAAACTTAG  42 30
        miaA  980906 ..  980918 -  -4.8   -5.1925   GGAGAAGGTAAAAAA                CACG GAGCT CGTG                GATTACATTATGGGG  83 201
  CPSIT_0902  978200 ..  978211 -  -5.8  -2.71335   TAAGAGAATAAGCGA                CGCT CTAG AGCG                 TATTTATAAAACCCT  55 102
  CPSIT_0901 NONE
  CPSIT_0900 NONE
        fabF NONE
  CPSIT_0898  975079 ..  975090 -  -3.6  -3.66497   GAACAAAGTCTGAAA                GCAG ATAT CCGC                 GGTGACGATGATCCC  52 448
  CPSIT_0896  973385 ..  973402 -  -5.5  -3.34344   CTATTTCTCAAGCAA             GAGCGTG GGAT CATGCTC              CAGGGGCTTTTTTAG  56 225
  CPSIT_0894 NONE
  CPSIT_0893  969849 ..  969859 -  -4.6  -4.46212   CTGTGTACGACAAAA                 GCCG CCT CAGC                 TTGATGGAATTTCGC  67 283
  CPSIT_0890  965382 ..  965422 - -10.7  -4.73864   TTAATTAAGAGAAAA  TAAGAACTTTAGAGAGG GAGATCT CCTCTCTAAAATTCTTT  AAGAAGAAATTAGCT 100 39
        lysS  963498 ..  963513 -  -7.6   -3.3344   AGTGAAGTTGCACAA              CTCGTT GAAG AACGAG               AAGTTGCCCGCAAGG  65 138
  CPSIT_0886  960559 ..  960569 -  -6.8  -3.65754   AGAAATTATTTTAAA                 CGCA TTG TGCG                 CGAGGCCTTTCGTTT  64 178
        rpmJ NONE
  CPSIT_0884  959398 ..  959445 -  -3.6  -2.99593   ATTCCAGAATTAAAT GAGGCGTTAAAAATTCTTAAAT AAAA AACAAAAAATCTTTAACACCCC TGCTATCGTCGTGGG  47 58
  CPSIT_0880  951819 ..  951829 -  -2.6    -2.858   AAAGAAACTTGAAAG                 TTTT CAT AAAA                 ATCAACAAATTAACA  42 143
  CPSIT_0879  951448 ..  951475 -  -6.2  -4.58773   TTTATGAAAGCAAAA        CAGGCTGCGATT TTTG ATCCACAGCCCG         CTAATGTCTCGAAAA  74 109
  CPSIT_0878  950847 ..  950878 -  -8.8  -3.42861   AACTTATAATATTAA      TTATCAGGCGTTTA TAGG TATGCGCCTGATAA       TCTTAGACCATAACA  75 49
  CPSIT_0877  950126 ..  950157 -  -7.4  -4.34353   GATAGAGAAAAAAGA      TATCCCGATTTTAA AAAT TTGATATCGGGATA       CTTCTAGGAAAACTA  81 51
  CPSIT_0876  949561 ..  949590 -  -6.6  -6.15828   TGTAGCAAAAAAAAA      GTGGCC--TGATAG ATTC CTATCAATGGCCAC       TTTTCTCAATCCTAA 100 53
  CPSIT_0873  945136 ..  945166 -  -2.6  -2.87319   CTGAATTTATGAAAG       CTGCTATTCTTCAT GCT ATGGAAAATAGCTA       TGCTCTAGTCATTGC  42 464
  CPSIT_0870  943151 ..  943163 -  -4.9  -3.33766   TAGTCATAAATAAAT                TATCT TCT AGATA                CTGTTACAACAACTT  55 12
  CPSIT_0869 NONE
        rpsF NONE
        rpsR NONE
        rplI NONE
        ispE  940287 ..  940312 -  -6.9  -3.49568   CTACTGACAACAATA         CTGAAGAGCTT AAAC AAGCACTTCAA          AGGATTACCACAGCT  64 164
  CPSIT_0863  938560 ..  938579 -  -2.2   -3.2964   AAAGCGTCTGTACAA            TTTTCACT ACCT AACGAAAA             AATTGCCGCTGCTAA  45 145
  CPSIT_0859 NONE
        rpmF  932366 ..  932376 -    -4  -2.62983   TGCACGTTCATAGCA                 CAAA TAT TTTG                 TTATTTCTTTTCTAC  45 26
        plsX  931403 ..  931415 -  -2.7  -3.82208   TAGCAAATAGGTAAA                CTTAA AAA CTAAG                AAAGGCTAGATAAAA  51 21
      pmp22D  926644 ..  926667 -  -9.6  -6.21477   AACAGTAAAAAAAAA          GCGCTGTG TGAGGTTT CACAGCGC           TTTTTTGATTTCACA 100 59
  CPSIT_0851  918467 ..  918480 -  -5.3  -3.85047   ACCAAAAAAGAAAAT               CAAGA ATAG TCTTG                TTTAGTGCGCCAAGT  61 200
  CPSIT_0850  917224 ..  917241 -  -5.5  -4.87665   TTGTATTGAGAAAAA             GAGCGAT GCGA AACGCTC              TTTGTATATTAAAAT  77 112
  CPSIT_0848  914715 ..  914749 -  -9.5  -3.72588   TAAGCCATAGGGAAA     TTAAGGACTTTCAAC TATTT GTGGAAAATCCTTAA     TTAGAATATGAGATT  81 41
  CPSIT_0846  913913 ..  913947 - -10.9  -3.72588   TAAGCCACAGGGAAA     TTAAGGACTTCCAAC TGTTT GTGGAAAGTCCTTAA     TTAAAATATGAGATT  90 54
  CPSIT_0844  912157 ..  912185 - -12.6  -5.81032   GAATGGCAAAAAAAA        CTCGACCCTATT TACCC AATAGAGTCGAG        ATTATACTAATTTAA 100 77
  CPSIT_0843  911053 ..  911074 -  -4.3  -6.35605   TAACACAAAAAAAAA           GCTCCACAC ATAA GCAAGGAGC            CTTTTTTGATATTTT  95 55
  CPSIT_0842  909836 ..  909848 -  -6.3  -3.80772   CAAATAAAAAATATA                GGTAA GTT TTACC                CTTTGTTATTCTCAG  66 21
  CPSIT_0841  908765 ..  908775 -  -5.4  -2.92642   AGCAGCAGCTATAGA                 TAGC CTT GCTA                 ATCCTGAATCTAAAG  53 340
        glmM NONE
        glmS NONE
  CPSIT_0836  900694 ..  900704 -  -2.6  -4.20084   ATTATTTATTTAAAA                 TTTA TAA TAAA                 GACTAGCTAAATTAA  55 9
  CPSIT_0835  899834 ..  899851 -  -5.5  -4.39828   AAGATCCCTACAAAA             TTCGTCG GCTA CGGCGAA              CTTATAGGGGACCTT  70 94
  CPSIT_0833 NONE
  CPSIT_0832  896748 ..  896769 -  -6.7  -2.82681   GAAAAGCGGATTATA           TTGTAGCAA GATA TTACTACAA            AGAATTTTTATCTTA  58 192
  CPSIT_0831  895081 ..  895099 - -13.2   -5.4588   CAAAAGCACAAAAAA             GCACTCTC TAA GAGAGTGC             TTTCATTAAAATTGT 100 60
  CPSIT_0829  890512 ..  890531 -    -5  -3.37912   GATTTAGAGATAACA            TCTTCTCT ACAC AGAGTAGA             GGATCCATCTCCTAT  54 132
  CPSIT_0826 NONE
  CPSIT_0825  883957 ..  883981 - -15.1  -6.26417   TATCAGAAAAAAAAA          CGACCTTTGGG AAT CCCAAAAGTCG          TCAAAGTACGTATAT 100 59
        trmB  883044 ..  883057 -  -3.9  -2.60813   TATTCCTTTAAACAT               CAATA AGCC TATTG                CAAAGATACTCTTTT  45 131
  CPSIT_0822  882259 ..  882269 -  -5.4    -3.737   TAATCCCCCAGGAAA                 TTCC GCG GGAA                 AGCTCATCGATGAAG  60 206
        infC NONE
        rpmI NONE
        rplT NONE
        pheS  878405 ..  878421 -  -4.3   -3.8253   AAAGAAACGGAAGAA              GAGGGAT TCG AACCCCC              GGACCCTTTCAGGTC  57 86
  CPSIT_0814  875621 ..  875637 -  -3.7  -3.41075   ACACCATGGAAAAAC              TGGCATT TAC AACACCA              TCTCTTCCTATAGGA  50 525
        tilS  872812 ..  872822 -  -2.6  -2.84587   GTTTATAAAACCAAG                 TTAT AAA ATAA                 AAAATATGAAAATCT  42 106
  CPSIT_0810  869943 ..  869959 - -13.7  -6.18768   AAAAGACAAAAAAAA              GCCCCGA ATT TCGGGGC              TTTTCACATCAGTAC 100 54
  CPSIT_0807 NONE
  CPSIT_0806 NONE
  CPSIT_0800  863638 ..  863652 -  -2.1  -3.52113   ACTTTTCGATAAAGA               CGCTT ATTAA AAACG               TGCATGGCCTCAAAT  45 58
  CPSIT_0799  862316 ..  862330 -  -5.7  -4.64763   GTAGGGAAAAAAGAA               GGGAT TATAG ATCCC               AAAAACCACTGGGAA  73 93
        fumC  856288 ..  856335 -  -3.7  -5.88471   CAGGAGTAAAAAAAA CACCGCTAAGTG-ATCTTAAACG TTAT CATTTA-GATGAACTTATCGGTG TTGATCATATCTTCT  90 105
  CPSIT_0792  853153 ..  853169 -  -2.4  -5.07107   CAAAGTTTTAAAAAA              TTTTTT TACTC AAAAAA              CAACCACATCAAAAA  67 34
  CPSIT_0791  851192 ..  851218 -  -7.5  -6.09888   GCTTAATAAAAAAAA        CCTTTAG-AACA ACAT TGTTTCTAAAGG         TTATTTAATATAACT 100 67
        ispH  850194 ..  850208 -  -2.1  -3.61244   TATTCTATAAATCAA               TACGC GCAAT ACGTA               TAAGAATGAAGACTT  47 42
  CPSIT_0789  849050 ..  849068 -  -9.6  -2.91728   ATGTTGAATAGTAGA             GAGCAAGA TAA TCTCGCTC             GTTTAGAAGCTAGAA  71 497
  CPSIT_0783  843771 ..  843788 -  -2.6  -4.26351   GAGTAATTCAAGAAA             TGCTCG GTCACG CGCGCA              TTGCCTCTACGGAAG  57 108
  CPSIT_0781  841274 ..  841299 -  -8.3  -3.80437   AAAACTATTAAAACA         CTGAGGGAAAA TGAG TTTCCCCTCTG          GTGAAAAGCTTTAGG  75 36
  CPSIT_0780  840999 ..  841009 -  -3.2  -4.52949   GCTGCAAAAAAAATA                 CTGC TGG GCAA                 AAAGATAAAAAAGAA  62 84
  CPSIT_0779 NONE
  CPSIT_0778  838765 ..  838797 -   -15  -5.20781   CAGGATAAAAGAAAA      CCTTTGGTTCCTAG GAGGT CTAGGATCCAAAGG      TCTACTTTATCATGG 100 112
  CPSIT_0757  818408 ..  818422 -  -2.8  -4.65895   CTTCTTATTCAAAAA               TCAAAG AAT CTTAGA               GGCCGCATTGTAATA  63 73
         asd NONE
  CPSIT_0755  815985 ..  815997 -  -6.3  -2.62616   TCAGCGGTTATACTA                CAGAA AAC TTCTG                CTTAACATAATCATT  57 5
        dapA  814610 ..  814626 -  -5.9  -3.47226   ATATGAATGAATCAA              TCTACCT TAT AGGTAAA              ACGATTAAGGACAGC  61 497
  CPSIT_0753  813835 ..  813850 -  -3.2  -2.70532   ACTCTTATAAATTTA              GCAAAC TGTG GTATGC               GTTATTTTGTATGCG  43 27
  CPSIT_0752 NONE
  CPSIT_0751  811311 ..  811322 -  -2.2  -4.37658   AAGGTGGCTAGAAAA                CAGA AACA CCTG                 TCTGAAAAAACTGAT  57 64
  CPSIT_0748  808342 ..  808355 -  -8.1  -2.84794   GGAACGGGATAACCA               TGCGC TCAT GCGCA                GGCATTACAATAGGA  67 174
        infA NONE
         tuf  804596 ..  804626 - -14.3  -5.14477   TACACACCCAAAAAA       GCATGATTAAGAT TTATC ATCTTAATCATGC       TTATAAAATCACCTG 100 43
        secE  804243 ..  804257 -  -2.1   -2.6428   AAACATGCAACTAAC               CAAAC AAAAA GCTTG               TTATACCACTTAACA  40 6
        nusG NONE
        rplK NONE
        rplA NONE
  CPSIT_0736 NONE
        rplL  801432 ..  801462 - -13.6  -5.69473   TACATGATAAAAAAA       GAAAAGAAAAATCT GTA AGATTTTTCTTTCC       TATAAATTACAAGCC 100 32
        rpoB NONE
        rpoC  793312 ..  793339 - -12.2  -3.25304   AAATATTACTATCAA        GGAGGTTATAGGT CTA ACCT-TAACCTCC        TCTTTTGATCATTAA  89 48
         tal NONE
  CPSIT_0731  791751 ..  791761 -  -5.4  -4.84017   AAGCTTTCAGAAAAA                 GAAG CTA CTTC                 TGGGGATACTATCCT  79 95
  CPSIT_0729  790266 ..  790287 -  -2.3  -3.96386   TGATAAAAAATAATA           TTGAGTCAT GGCA ATAACTCTA            AAATTGGTTAGGATC  52 58
  CPSIT_0728 NONE
        atpA NONE
  CPSIT_0726 NONE
  CPSIT_0725 NONE
  CPSIT_0724  783824 ..  783835 -  -4.4  -3.70037   GAATTATTACCTAAA                CCTA TCCC TAGG                 AATCCACAACCTTAT  55 21
  CPSIT_0723  783240 ..  783250 -  -6.8  -3.02074   CAAACACAGTATAGA                 TCCC AGA GGGA                 ATAGAAGAACCCATA  59 46
  CPSIT_0722 NONE
        valS NONE
        pknD  776692 ..  776703 -  -2.2  -4.04209   GGAAATTACTACAAA                CTCC TATT GAAG                 AACTCCCTATACTCT  53 457
         pyk  769969 ..  770007 -  -5.3  -3.31144   TTTTTATCTGCATAA   TCCTACGAGCATCAGCT TATTT AGCTGATGCTGAGACGA   TGTCATTAACTGTTG  55 3
  CPSIT_0713 NONE
        cydB  763369 ..  763385 -    -3  -4.11394   ACGTCATCTCTAAAA              CTTCTA ATACA CAGAAG              GGAAATCTGTTTTCC  57 12
  CPSIT_0711  762027 ..  762041 -  -2.8  -5.02074   TCATGTCGTAAAAAA               CAATCC CGG GGATTT               TTTACTTAAAGACAA  70 193
  CPSIT_0708  758472 ..  758485 -  -2.3   -3.8823   TGCAACTATAAAATA               GTTGC AGCC GCAGC                AGCAAGTTTAGAGCG  50 2
        ileS  754006 ..  754031 - -11.9  -6.07374   AGAAAAAATAAAAAA         GAAGACTCTCC TAAC GGAGGGTCTTC          TTTTCTCTATGTAGA 100 55
        rpmE  750571 ..  750612 -  -2.4  -4.63172   CATTAAATGACAAAA CACGTT-TCAATACACCCTA ATCA CAGGG-GAAATGACAACGTG TTTACAAAAACATTG  59 58
        prfA NONE
        hemK NONE
         ffh NONE
        rpsP NONE
        trmD NONE
        rplS NONE
  CPSIT_0696  744463 ..  744475 -  -5.5  -3.31802   TAAACTATTAGAATA                CCTGC CTC ACAGG                AGCAAAACTTTTTCT  55 5
         gmk NONE
  CPSIT_0694  743531 ..  743550 -  -3.6  -3.19081   GAGGTAATTAAGACA            CGTGAA GGCATTAT TTCACG             TCACTCCATGTATAA  49 16
        metG  741767 ..  741780 -  -3.1  -5.26875   GTCGGAACGAAAAAA               GCCAT TGCT ATAGC                CACAAGAAATGATAA  76 131
  CPSIT_0690  737006 ..  737016 -    -4  -3.67634   GATTATTGGAAAATA                 TTTG TAA CAAA                 AGACACGACATCATT  54 250
  CPSIT_0681  727505 ..  727529 -  -2.1   -4.3739   CATTGTTTTACAAAA          CAGTCGTCTCA GAG TGAGAAAATTG          ATAATTTCTCCTCAG  57 132
  CPSIT_0680  726041 ..  726057 -  -2.9  -4.75776   AACCCAAGTTAAAAA              GATGCTA ATT CAGCGTC              CTTTCTCCTGTCGTG  63 13
  CPSIT_0679  724581 ..  724617 -  -5.3  -2.66274   TGTGCGAGAATGAAT    GCGAATTTATAGAGAAT CCT ATTCTGAATAAATCCAC    TTTAAAAATCTGTCT  51 7
        rpiA NONE
  CPSIT_0675  722626 ..  722636 -  -3.2  -3.30124   TTCTATTCTTCATAA                 GCTA CAG CAGC                 ATCAAACACCGACTT  47 2
  CPSIT_0674  721935 ..  721953 -  -2.3  -2.76708   TAACTGACATATAAC             CCCCTAA GAAAG TCCGGGG             TTATTTTGAAACATG  40 94
  CPSIT_0673 NONE
  CPSIT_0672 NONE
  CPSIT_0671 NONE
  CPSIT_0670 NONE
        clpB  715389 ..  715406 -  -6.3  -2.61602   CGAACCTATAACGTA             GATCTCG GATC CAAGATC              CAGTTCTAATCTCAT  57 168
  CPSIT_0665 NONE
  CPSIT_0664  705191 ..  705213 - -10.8  -3.49387   AAAAACATAAACACA           GGATAATAAA AAA TTTATTATCC           ACTCGTCTTAAGTAC  87 50
  CPSIT_0663  704708 ..  704737 - -10.1  -5.96219   CACGCATAAAAAAAA       CCGTTCTATCGTC TTAA AACTATAGAACGG        TTTTCAACAAACTTG 100 95
  CPSIT_0661  703800 ..  703813 -  -3.9    -5.243   TAAATTATGAAAAAA               GAAAA AGTC TTTTC                TATAAAGCTAGAAAG  76 390
  CPSIT_0659  703057 ..  703098 - -17.7  -4.09374   AATATACAAGAATAA CAAAGAAGGACTTT-GGAAA GAT TCTCCTAAAGTCCTTCTTTG TTCTTAAGAATAAAC 100 119
  CPSIT_0658 NONE
        ligA  699025 ..  699035 -  -2.6  -4.22535   ATAACTCTAAAAGAA                 TTTA TAT TAAA                 TCATATATGTAAGGA  55 104
  CPSIT_0656  694298 ..  694308 -    -4  -4.51363   GACTAAAGATCAAAA                 GATT GCT AATC                 TTTATCATGCAAATC  66 260
        leuS NONE
  CPSIT_0652  687316 ..  687334 -  -8.8  -2.66274   TCCCTTATAACGAAT             GGAGTGGC GGG GCTACTCC             TTTATATAAAATGAT  65 525
  CPSIT_0633  668105 ..  668149 -  -8.8  -3.16217   GCTAAAGTGAAGATA GCTCTTTCGACTCTAG AGGTAGCGAAAAA CTAGACTCGAAAGAGC TGATCTTCTATGAAT  73 73
  CPSIT_0632  667076 ..  667089 -  -3.9  -5.77571   ATCAAAAAAGAAAAA               GTTAT CTTA ATAAC                TAAGAGATTTAACCT  90 68
  CPSIT_0629  666139 ..  666167 -  -2.4  -3.39936   AGGTAAATTCGATAA        CGGTAATGTC ACGTTGAAA GACACTCCCG        GATATCCTCTATAAG  45 5
  CPSIT_0628  665104 ..  665117 -  -2.3  -4.36914   TTGCCCTTTATAAAA               GCATG CAAG CAAGC                TTTTCAGGGAATTTC  59 369
  CPSIT_0626  663111 ..  663129 -  -3.2  -3.14149   CGACAATAGACAAAG             GTAAAG CATACAT CTTTAC             TAAACTATCTTCACG  45 207
  CPSIT_0625  662875 ..  662887 -  -6.3  -3.60562   ATACAAAATATAAGA                GAAGA GAC TCTTC                TGATACTCCCGTCTC  64 46
  CPSIT_0613  653728 ..  653752 - -15.9   -3.9467   AATCACACAGAATAA          CTGAGAGCTTT TAA AAAGCTCTCAG          AATACATTGAGATGA 100 67
  CPSIT_0612  652339 ..  652350 -    -3  -3.62762   AATCAAGAATGAGAA                TCTT ACTC AAGA                 TAGCAAAACCTCCTA  50 38
  CPSIT_0611 NONE
  CPSIT_0610  649394 ..  649421 -  -7.8  -3.74747   GCAATTTTTAGGAAA        TAGCTTTCACAA ACTC TCGTGAATGCTA         CTTAACTTTTCTCCT  73 23
  CPSIT_0609  648555 ..  648565 -  -5.4  -4.27886   TTTGAAATAGAGAAA                 GTCA ATG TGAC                 TAAAGACAACATCAT  67 294
  CPSIT_0606 NONE
  CPSIT_0605 NONE
  CPSIT_0604  633108 ..  633155 -  -7.4  -3.11192   TATACTATGAGTTAA TCCTCTGATAATATTAATTA ATTCAACA TAATTAATATTATCAGACGT TATGTGAACGCCTTG  66 18
  CPSIT_0603  632050 ..  632087 -  -2.1  -4.28115   ACCCAGAATAAAGAA   CTG-ACCACCATCGAAAT GTT ATTTTAATGGGGATACAG   GTTAGAAATTGAAGG  57 27
  CPSIT_0602  630624 ..  630639 -  -7.6  -2.96061   GAAAGAAAGGAACGA              GCGTAA TATT TTACGC               TTTAGTGTATTTAAA  64 345
  CPSIT_0601  629573 ..  629599 -  -8.1  -5.78622   TTATTCTAAAAAAAA         TAGGTATCCTG ATTAA CAGAATACCCA         TCCTTCACTATATAG 100 61
  CPSIT_0594  621443 ..  621463 -  -3.9  -5.77988   AGAGACATAAAAAAA            GGCAAGAAG AAG CTCTCTGCC            TTTTTTTAATCATGC  90 52
  CPSIT_0593  620523 ..  620568 -  -6.7  -3.78962   CGAAACATAGTTAAA TCAAATAATCATTTTTTACTTA TTT TAA-TAAAAAGTGATTATTTAA TACTAAGTTAATAAA  66 51
  CPSIT_0592  619165 ..  619183 -  -3.8   -5.5762   AGGAAATAGAAAAAA             GTTAGGAA AAT TCCCAAAC             TTATGCTTATCCCTA  79 65
  CPSIT_0591  615667 ..  615677 -    -4  -3.75665   GGAGACCGGATTAAA                 GAAA GAA TTTC                 GTCTTCTCATAGTTT  55 155
  CPSIT_0590  614298 ..  614316 - -13.2  -2.98823   TGGTGGGGAGATATA             CAGCTGCT CAT AGCAGCTG             TTGCATGATTTAGTA  88 35
  CPSIT_0586 NONE
  CPSIT_0585  609768 ..  609782 -  -4.4  -2.56177   ACATCCTAGAGCAAC               TTAAAA ACA TTTTAA               TCAGTTCCTTTATGT  47 62
         zwf NONE
         pgl  606934 ..  606963 -  -2.2  -6.04324   CTAAAAAACAAAAAA       GTGCTGTTTTAC ACTTAA ATAAAGCAACAC        TGTACACTATGGTTG  86 336
  CPSIT_0579  603457 ..  603470 -  -2.4  -3.81408   TAAAAGTAAAATTAA               GCTT TTATGC AAGC                TTCAATACTTTGAAA  50 8
  CPSIT_0578  602310 ..  602321 -    -3  -5.14965   AGCTTTATTAAAAAA                GAAT GTTG ATTC                 TAAACAAGAATTAAA  70 251
  CPSIT_0575  599393 ..  599409 -  -5.2  -4.09685   TTTTATTTTTCAAAA              CTTCTA CCTAT TAGAAG              ATGATACTGTAATCA  63 405
  CPSIT_0571  595789 ..  595802 -  -3.9  -2.79183   TGGATTGCCACCACA               TTTCT GGCA AGAAA                TAGAGGGTATTTCAT  46 141
  CPSIT_0564  591617 ..  591649 -  -2.9  -5.82316   ATTACCGAAAAAAAA      TAAATCTTACTAT AATTAAA ATAGTAAGACTAA      TCTATAAAAATATGT  86 41
        surE  590702 ..  590725 -  -6.8  -3.11088   AATCTATGGAAGAGA          TCGGTAGA GAGAATGT TCTACCGA           TTTTCTAATTAGGAA  59 62
  CPSIT_0560  589294 ..  589308 -  -4.2  -4.48221   GAGCAATTTAGAAAA               GGTTTG GAC CAATCC               AGCTTAATTGGTACG  67 29
  CPSIT_0557 NONE
  CPSIT_0556  585621 ..  585640 -  -3.7  -4.35581   TTAAAAGAGTTAAAA            CTTTTTA TTTGAC TAAAAAG             TAAGACTTATCCGAC  62 32
  CPSIT_0555  584292 ..  584312 - -11.1  -5.77988   AGATATATAAAAAAA            CCCGAAGCA TTG CGCCTCGGG            TCCATTAAGAGATAC 100 61
  CPSIT_0551  581340 ..  581350 -  -3.2  -5.00895   GTGATTATAGAAAAA                 GCCT ATC AAGC                 TTTAGATAACTCTTC  72 108
  CPSIT_0540 NONE
  CPSIT_0539  566485 ..  566514 -  -5.2  -5.28414   TAAGAAACACAAAAA       GCAGT-CCTTAAA AAGGA TTTAAGGTACTAC       TTTTGTGCATTCTCT  82 46
  CPSIT_0534 NONE
  CPSIT_0533 NONE
  CPSIT_0532 NONE
        incC  555696 ..  555713 -  -5.7    -2.604   TAATATATTAACTGA             TGAAATT AATT AATTTCA              AGGTGCGTCTAGGTG  51 76
  CPSIT_0530 NONE
  CPSIT_0529  551972 ..  551989 -  -2.7  -3.89956   GTATGACATACTAAA             TAGGTTG CAAA CAATCTA              GATTGAAAAATTAGA  53 485
        recR NONE
        yaeT  545944 ..  545966 -  -6.3  -3.38207   GATCTAAGAGATGAA           GAGCTTTAG ATTAG CAAAAGCTC           TCTCTGAAGACAACC  62 78
  CPSIT_0522 NONE
        lpxD  544089 ..  544112 -  -4.6  -4.92791   GAGAATACAATAAAA          GCACT-GAATC ATG GAGTCGAGTGC          TTTACTTTTTCTAGT  74 178
        pdhA NONE
        pdhB NONE
  CPSIT_0516  539393 ..  539406 -  -5.3  -3.34962   GGCTATATGTGATAA               CAATC CCAA GATTG                CTCATGTGTTAAAAT  54 390
  CPSIT_0513  536216 ..  536227 -    -3  -4.30719   GTTGCTTATAAGAAA                TTGT CTCA ACAA                 CTGCTCTATGAAGAT  57 423
  CPSIT_0509 NONE
        acpS  530913 ..  530926 -  -5.3  -4.05788   GCTTCTTAAATTAAA               GCTAT TGCC ATAGC                TGTGGCGTACTCACG  63 2
        rpsA  528022 ..  528043 - -10.3  -3.26596   GCTAAACCAAGGCAA           GCTTATGTT ATAC AACATAAGC            TCAACCTTTTAAGTA  83 44
        nusA NONE
        infB NONE
        rbfA NONE
        truB NONE
        ribF  521701 ..  521711 -    -4  -3.91357   GTACAATTAGAAGAA                 GAAA TCA TTTC                 GCTTCCTGTAGAGGA  57 355
  CPSIT_0499  519474 ..  519496 -  -2.6  -2.78596   GATTTGTTGATCATA           TTTAGGGCTG CAT CCCCCCCAAA           GGTTCTACTGACAAA  42 58
  CPSIT_0498  517396 ..  517411 -  -6.2   -2.6563   CTCTTTAAGAATTGA              CAGATT AGAA AATCTG               AATTCTTCCTAATGG  55 14
        sctW NONE
  CPSIT_0496  515737 ..  515747 -  -3.2  -3.08467   GTTATAAATGATACA                 TGCC TAG GACA                 TGTAGATCAGGAAGA  45 1
        malQ  513981 ..  513991 -    -4  -4.27465   TATAATTGAAAAGAA                 TCTA TGT TAGA                 CATTTTCTGATATAT  62 127
        rpmB  513649 ..  513659 -  -3.2  -3.57144   CCCTTTATTTGTAAA                 GATC ACA GACC                 TTTGCTTTTAGCTCT  50 17
        ubiD  511840 ..  511851 -    -3   -2.7623   ATCAAAAAAAATCAC                TCTT TTTA AAGA                 AAACTTAATAAAAAT  43 54
  CPSIT_0492  510225 ..  510236 -  -4.4  -4.97461   AATAAAGATGAAAAA                CGTA AACC TACG                 GATATAGATTCGGGA  73 506
  CPSIT_0488 NONE
  CPSIT_0487 NONE
  CPSIT_0486  505364 ..  505375 -  -4.4  -4.52349   AGAAAGAAAGAGAAA                TAGC ATCC GCTA                 TGAAGCGTTATCGTT  67 23
        dnaN NONE
        recF  502469 ..  502489 -  -7.1  -2.65832   TAAAAAATGATCAAG            TTATTAATT ATT AATTAATAA            AAAATCACTCTTTAA  61 30
  CPSIT_0482  501129 ..  501143 -  -2.8  -3.78775   CTGCGTACTATGAAA               GCCT TAGTTGT AGGC               CGACTAAATCCTCAA  50 288
  CPSIT_0475  493319 ..  493336 -  -7.1  -3.60627   TTAGCCGATTGTAAA             GTCTTTT AAAC AAAAGAC              TGAGGAGAATCTAAA  68 13
  CPSIT_0474  491454 ..  491477 - -11.8  -6.15717   TAAAGACAAAAAAAA          TCCTCACCTG TTTC CAAGTGAGGA           TTTTTGTTAAGATCT 100 52
        lepA  487846 ..  487860 -  -4.3  -3.02471   GTTCTATCATACAGA               TTGGA TAGGG TCCAA               AACAACAACTCTAGT  50 247
  CPSIT_0469  484448 ..  484463 -  -6.8  -3.54919   AATTATTTCTTTAAA              CGAGGA AAGA CCCTCG               TTATCTGATGGTGAA  64 304
  CPSIT_0464  481366 ..  481409 -  -2.8  -3.38201   GAATAGGTTGAAACA TAAAATATTAATTTTTTTTA TGAC TAAAAGTTATTAATATTTTA ACGTATTCCAGCCTT  47 173
  CPSIT_0463  479962 ..  479985 -  -8.3  -2.90212   TTATGATGCCATAGA          TCTACAACA CATACT TGTTGTAGA           TCCACGACAAGGTGA  67 48
  CPSIT_0461  478537 ..  478550 -  -2.5  -3.21057   ACATAATTAAAATTA               TAAAA ATTT TTTTA                AATAAAAGTAATAGT  45 97
  CPSIT_0460  477112 ..  477124 -  -4.1   -3.3878   AGAGAGGGCAAAAAG                CGCTT TAA AAGCA                AACCGAAAACCAAGT  53 245
        ispG NONE
  CPSIT_0457  474155 ..  474171 -  -3.7  -3.77666   GATATCGAAGTGAAA              CTTGC AGATTTG GCAAG              TAGAGCTCGAGATGG  54 340
  CPSIT_0454 NONE
  CPSIT_0453  468914 ..  468942 -  -4.1  -4.63218   GTCTTTTTAATAAAA        TCCAATAACAATT ATT AATTATTATTAAA        ATTAAAAAGAAATGT  67 27
  CPSIT_0452  467436 ..  467462 - -10.3  -3.34227   TTATTAAATTATGAA         CAAGGCTAAGT AATGA ACTTAGCCTTA         TTTTAGCAACAGAAA  85 41
  CPSIT_0449  465432 ..  465456 - -11.6  -4.62475   ATGGAGAAATTAAAA          GAGGAATCTT TGTGT AAGATTCCTC          AATACATACTTCCTA 100 38
  CPSIT_0442  457269 ..  457294 -    -4  -3.92522   GCGTAATCTTAGAAA         GAACAGCTTT ATATGA AAGGCTGCTC          GCTAAAAATCCTCAG  57 313
         dcd  454594 ..  454607 -  -3.1  -4.91429   AAACTTTAAACAAAA               GGAAC TGTA ATTCC                CTGCTGTTTTTGATA  68 2
  CPSIT_0437 NONE
  CPSIT_0436 NONE
  CPSIT_0435  451593 ..  451605 -  -7.7  -2.53581   TAGACGTGGAAGGTA                TAGCC TGT GGCTA                CGGTTCTGCATGTTC  61 213
  CPSIT_0432  448489 ..  448503 -  -2.8  -3.19653   GTATAATTTCATTAA               TCATCA GTT TGTTGA               TAAGAGTATTCTATA  45 7
  CPSIT_0431  447964 ..  447987 - -11.1   -5.9873   TGATGACAAAAAAAA          GAACCCAGA AAGGTG TCTGGGTTC           ATTAATCTTTCTCAT 100 62
  CPSIT_0429  447174 ..  447204 -  -9.1  -2.75826   GAGGTGAAGAGATCA      TCCACATGCCCGCA ATTT TGCGGACATG-AGA       TGTTTCGCAAACAAC  72 155
  CPSIT_0428 NONE
  CPSIT_0427  446044 ..  446056 -  -2.7  -2.69288   ATAACCAAGAATGCA                TCATA AGT TACGA                ATAATTTGCACAGAC  41 20
  CPSIT_0426  445071 ..  445095 -  -2.9  -5.11112   AAACTTGAAGAAAAA          CGAGAAAAATA GAC TGTTTTTCCCA          AGGCTTTCCTCTTTA  69 201
  CPSIT_0423  442602 ..  442626 -  -2.8  -4.77775   AGTGTACAAAATAAA          TACGGAGATC AACTA GATAGCCGTA          AGGACCAACACGCTC  65 104
  CPSIT_0420  437274 ..  437286 -  -6.3  -3.88097   CCACAGAATTAAGAA                TGCTT AGG AAGCA                TTTCAGGACCAACTC  66 6
  CPSIT_0418  435512 ..  435534 -  -2.9  -2.81208   TGTCATTTAAAATAC          TC-CATATTA TTCA TAATATGCGA           TTAAACTTCTTTGTC  42 26
  CPSIT_0417 NONE
  CPSIT_0416 NONE
  CPSIT_0415 NONE
  CPSIT_0414  432417 ..  432433 -  -6.6  -3.63991   CACTATTTGGAATAA              CCTTAC TTGTG GTAAGG              ATATCCCTGAGGAAG  66 494
  CPSIT_0404  424754 ..  424774 -  -3.9  -2.69151   TGTCTCTATAGATGA            TCCCGATCA TCG TGTTCGTGA            GGATGGAACAAAGAA  45 203
  CPSIT_0400 NONE
  CPSIT_0399  420687 ..  420699 -  -3.3  -4.09818   AAGATTAATGAGAAA                GAGCC GCG GGCTT                TTTGATGATTTTTTT  57 2
        dnaA NONE
  CPSIT_0397  418126 ..  418140 -  -2.8  -4.02334   TAGGTATAGGAGAAA               CACG GACTTGT CGTG               ATTGTTTGCCTTCGT  55 404
        nqrB NONE
        nqrC NONE
        nqrD NONE
        nqrE  413950 ..  413964 -  -7.2  -2.73364   TTGCTAGGGGAAGTA               TAGAAG ACG CTTCTA               CTACGTAATTACTGA  61 34
  CPSIT_0384  405766 ..  405784 -  -3.8   -3.9712   TCACCCCAGGACAAA             CCATCGCA TTT TATGATGG             GGAGAGATGCCTGGG  59 61
  CPSIT_0382  404085 ..  404096 -    -3  -2.74701   ATATGGGCAAGAGTA                TCAT GACA ATGA                 AAATCAACTTATTAA  43 29
  CPSIT_0381  403298 ..  403309 -    -3  -4.18018   TGCTCGCATTGAAAA                TCTT TTCG AAGA                 GCTTCAAGCAGGAAA  57 193
         rnc NONE
        radA NONE
  CPSIT_0369  391351 ..  391362 -  -2.2  -3.77008   TAGTAATTAAAAAAG                CTGC AGAA GCAA                 TGATAAGTCGTAGCT  50 41
  CPSIT_0368  390848 ..  390858 -  -2.6  -4.29977   AAACAAGGCAACAAA                 TTAT CTC ATAA                 AGTCACATAAAAACA  58 28
  CPSIT_0366  390135 ..  390176 -  -2.3  -4.46073   TCTGAATAGAAGAAA CACCTGAGTTTCACATG TTATTGGC CATACTATACCCAGGTG  TTTTGATAAGAGTAC  59 92
  CPSIT_0365  389127 ..  389139 -  -4.1  -4.33182   TCATCTACAAAATAA                TCCTA ATA CAGGA                GCCTCAGATGAGGAG  64 348
        dnaX NONE
  CPSIT_0362  385190 ..  385217 -  -7.6  -2.50782   AAAGTTATTAAAAGC        CAGGACCTGTGC AGAA GTTCAGGCCCTG         TTAGCTTAAAAAGGC  63 31
  CPSIT_0358  380951 ..  380963 -  -3.4  -3.49668   AAAGTTTTGATAGAA                GGTA GAGTT TACC                CATGTTTTATAACTC  48 32
  CPSIT_0357  379364 ..  379380 -  -6.5   -3.7511   TTTTTTAGAACATAA              GGCGTTG TAT CAACGAC              GTATTTTTAGTGCAT  64 474
         lon  372384 ..  372424 - -10.1  -2.70932   TTTTTTTTGTAATGA  TAATTTAGAACCGTT AATTAAACAAA AACGGTTCTAAATTA  TCTTCTGAGAGCTAA  75 37
  CPSIT_0350  371565 ..  371587 -  -6.4  -3.75295   AATAGAATAAACCAA           TCTAGTAAAA ATA CTCTACTAGA           ACTTGCCAGAGAGTG  66 62
         rnz  370558 ..  370569 -    -3  -3.47345   AAGCTGAGACCATAA                TGTT CCTA AACA                 CTTTTTCTGCAGTAT  48 56
        xerC  369558 ..  369570 -  -3.3  -3.50853   TTTTGTCAAGTACAA                TGCTC ATA GCGCA                TAGCATAACAAAGAG  48 72
  CPSIT_0347 NONE
         maf NONE
  CPSIT_0345 NONE
  CPSIT_0344  363345 ..  363356 -  -4.4  -3.14218   CATGCATGAAAATGA                CCAT CTCA ATGG                 AGTTTTATACATTGA  51 218
        xseA NONE
  CPSIT_0337 NONE
  CPSIT_0336 NONE
         dxs  356666 ..  356697 -  -3.2  -5.53436   ATATAAGAGAAAAAA      TATAAATTAAACGC AGAA GATTTTAATTTATA       TCTCTTATAAGAGAT  77 406
  CPSIT_0327  347898 ..  347917 -  -8.5  -2.62263   ACTTGTTGGATAGTA            GAGGCGG AGGAAG CCGCCCC             TAATCGTGTGTTGAT  69 42
  CPSIT_0326  346126 ..  346148 -  -6.2  -2.92613   GCCTATGCTAAAGTA           CAAGGGGACA ACT CGCCCCTTTG           TTTCTACCTATCTTC  56 47
        rnhC  344328 ..  344340 -  -3.3  -3.61894   AATGTTTTTTAAGAA                GGAGG GGT CGTCC                TTTTTTGAAAACGAG  50 177
  CPSIT_0323  343242 ..  343253 -  -4.4  -3.77241   AAATTCCAATTTAAA                CTGA TAAT TCAG                 ACAGAACATCTACAA  57 94
  CPSIT_0322  342438 ..  342449 -  -4.4  -2.91126   ATAAATTATATTATA                GAAG TTAT CTTC                 GTTTAGTTGTGATAG  48 168
  CPSIT_0321  341134 ..  341166 - -15.1  -2.57192   ATCTAAGGGAACGGA      GGCTCTTTTGAAGTT AAA AACTTCAAAAGAGCT      CTTTTATTTTGTCTG 100 59
  CPSIT_0317  337234 ..  337269 -  -9.2  -5.10154   ATTGAAAATGAAAAA    TATCAAAAGCTACG-GA AAA TCACGCAGCTTTTGATT    TTTCTCTTTAACTTC 100 97
      pmp18G  335691 ..  335717 -  -4.4  -2.52623   GTTCCTCGACAACAT         CTTCTTCAACAG TAA CTATTGAAGGGG         CGGGTATTTCTTGAG  47 14
      pmp17G  332856 ..  332891 -  -4.8   -4.3208   TGCGAGAAGTGAAAA    GATATTGGTATCGTCA GAGT TGACGATATTAAAATC     TTATATAAAGAAGGC  67 189
      pmp16G  330100 ..  330121 - -15.9   -3.4439   GAGAGTAAGGGAGAA           CCCTGCCCA GAGC TGGGCAGGG            GAGAGATTTTTAGAA 100 35
      pmp15G  327399 ..  327428 -  -9.9  -2.80589   GGGTAAACAAAGGGA       GGCCCTGCTCCGC ACAT ACGGAGCAGGGGA        GGTGGATGAGATTAG  76 37
      pmp14G  324718 ..  324728 -  -4.6  -4.30231   AATAAGGAAGATAAA                 GACC GTA GGCC                 CTACCCCGTGAGAGC  64 63
      pmp13G  322065 ..  322094 - -10.7  -4.05877   GAGTAGATCAAAGAA       GGTCCTACCCCAC TTTC GTGGGGTAGGAGA        GGGGGGTGAGATTAG  93 37
      pmp12G  319109 ..  319126 - -11.3  -3.18024   GTTGATGAGGAAAAT             GCAGAGG ATAT CCTCTGC              TTAGATAACGATCTA  87 310
      pmp11G  316450 ..  316482 -    -4  -2.94099   GGTTGCTATGACATA      GGCATACCCCTTCC TAAGT GGTCGGGGTATACA      CAGTTAAAAATGCAC  46 29
      pmp10G  313766 ..  313776 -  -6.8  -2.77891   GATAAGGAGAAATAG                 GGGA TAC TCCC                 TGCTCTTTAAAGAAC  58 57
       pmp9G  310809 ..  310838 -  -9.4  -3.02263   AGATTTTCGTTAAGA       TGTT-CCCCGCTC ATAAA GAGCAGGGAAACA       CATTTAGAAGTGGAT  74 29
       pmp8G  307963 ..  308006 - -12.1  -5.63517   GTCTGAAAGAAAAAA GAGAAATTCAGAAAGC-GAT TGTTG ATCAGGTTTCTGAATTTCTC AAAGTTAAGTTTTCT 100 50
       pmp7G  304635 ..  304646 -  -5.8   -4.4572   AAGATCTTAAAGAAA                GAGG CATG CCTC                 AACCCTATCGTTAGT  72 46
       pmp6H  301641 ..  301676 -  -8.5  -3.03151   GTTGTTAAAGGAAAG    GAGAGAAATTCCCCT AGGGCA AAGAAAATTTCTCTC     GGTAGTTGATTTAGA  71 36
       pmp5E  300065 ..  300087 -  -7.9   -5.5074   CAAGCGAATAAAAAA           GTTTGTTTT TCTGC AAAACAAAC           TTTTTTAGACAGCCT  93 100
       pmp4E NONE
       pmp3E  293948 ..  293971 - -12.6  -3.66732   TAAGGATCTTAATAA          GGCTATAGAA CAAA TTCTATAGCC           TTATTTTTTTATTTC  95 40
  CPSIT_0287  277555 ..  277567 -  -4.1  -3.28791   AGGGGCCTGCTATAA                GAAGA GGC TCTCC                TTTCCCTATGACGAT  51 143
        aroF  276706 ..  276718 -  -6.3  -2.62579   TTTTTAAAATAAATT                TAACG CAT CGTTA                TTAAAGATTTTTATA  57 131
  CPSIT_0285  276303 ..  276318 -    -4  -2.77962   GTGTACATCGGAAAG              CCTTCT GAAG AGAAAG               TCTGATTCTCTGTTT  46 113
  CPSIT_0283  274335 ..  274364 -   -10  -2.52516   GTTGTTACCATGAAC       CCCCTTC-GCTGC GTTGT GCAGCAGCAGGGG       CTTTATTCGCTCTAT  75 37
  CPSIT_0279  268905 ..  268918 -  -6.7   -3.1855   TTTCCCAAGATTTAA               CCTCA GTGA TGAGG                GCATCGATATTTTTG  60 403
  CPSIT_0275 NONE
  CPSIT_0274  264202 ..  264232 - -12.7  -4.38116   CCCAGAAAAAGGAAA       GGCTAACGAAGCA GTTAT TGCTTTGTTAGCC       AAAACATTGTCTTTG 100 148
        proS  259767 ..  259777 -    -4  -2.97188   GGAGACCATTATAGA                 GAAA TGG TTTC                 CTGAGGTCAAGGATA  47 76
        hrcA NONE
        grpE NONE
        dnaK  255930 ..  255958 - -13.3   -5.3104   GGATTAAAAAGAAAA        TTCCCTATCCCTC TTA GAGAAATAGGGAA        TCAAAGATAAGATTT 100 49
  CPSIT_0266 NONE
  CPSIT_0265  253142 ..  253155 -  -5.3  -2.79023   TAATTTCAGTAACTA               GAGTA CTTA TACTC                CTTATATTTAATTTT  52 78
  CPSIT_0264 NONE
  CPSIT_0263 NONE
  CPSIT_0262  251861 ..  251883 -  -3.4  -4.40003   TGTTAGAAACACAAA           CTTGTAAAGG AAC CTTTTTCAAG           ATGAGAGCGCAAACT  60 43
  CPSIT_0261 NONE
  CPSIT_0260 NONE
  CPSIT_0259 NONE
  CPSIT_0258  247848 ..  247863 -  -3.2   -3.8948   ATAACAAGCAAAAGA              GTCATC ATAA GAAGAC               CAGCCTTAGAGAAAA  52 51
  CPSIT_0257 NONE
  CPSIT_0256 NONE
  CPSIT_0255 NONE
  CPSIT_0254  244814 ..  244828 -  -4.2  -4.07868   TGATATTTACACAAA               GGTACC AGC GGTAGC               GCGACGTTTCCTTTT  59 331
        hemD  239818 ..  239828 -  -5.4  -2.53012   AACTGTATTATGAAT                 CTGA TCT TCAG                 TGGGATAAACATGAA  51 377
  CPSIT_0247  238308 ..  238318 -  -5.4  -4.87892   TTTCAATAAAAGAAA                 TTCC TAA GGAA                 GAGTAACTTAAGAAG  77 334
  CPSIT_0246  237110 ..  237134 -  -8.7  -2.66962   CGATTATGAAAAAGT          TCATGAGGAAT ACC ATTCCTCATTA          TGCAGAAACAAAAAC  69 292
        nrdR NONE
  CPSIT_0237 NONE
        lspA  228310 ..  228320 -    -4   -3.5771   AAAAATTTTTTTAAA                 TGTT TTA AACA                 TAGCTATTCATTAAG  52 62
  CPSIT_0235  226860 ..  226879 -  -9.4   -5.3689   ATAAAGAAAAGAAAA            TCCCTAAT AAGA ATTAGGGA             TATGAAGTTGGTAAT 100 87
  CPSIT_0234 NONE
  CPSIT_0233  225999 ..  226034 -   -12  -2.52623   CTGTCTTGAGAATAT    GCCTCTAAAGATACTG AGAG CATTCTCTTTAGAGGC     TATAGGGGGGATGGA  84 51
       pmp2A  222937 ..  222991 - -10.3  -3.75163   AGAGAGCAAGAAAGA TCAAGATATTAGAAATGAGCTTTAG GGAGA CAAGAGCTCATCTATAATACCTTGA CGCATGCTATTCGTA  87 72
       pmp1B  217376 ..  217394 -  -2.4  -2.61681   TTGTAATTGTAGAAC             CGAGAATT CTA AGTTCTCA             ATTACAAAACAAGTT  40 76
  CPSIT_0227  214483 ..  214500 -  -4.2  -2.92475   TGTACTGTCATAAAT             TAGCAA AAGTTG TTGCTA              TAGTTTTTAGATTAT  48 0
  CPSIT_0226  213690 ..  213710 -  -7.5  -3.16668   CAACACCGCCAGCAA            TGGAGGCTC CTA AAGCCGCCA            GTAAAGAAGGAAAAA  67 74
        ispF  209640 ..  209662 -    -7  -4.12603   CCTAGGAAAGAATAA           GCTCTCCC AATTAAA GGAAGAGC           ACCGTTATGTTGCTG  71 48
  CPSIT_0212  203716 ..  203730 -  -2.2  -5.06414   TGCTCCGAAGAAAAA               CTTATT CAG AATAAA               CAGGTTGGTAAGAAA  67 52
  CPSIT_0210  201662 ..  201686 - -11.6  -2.91735   TTAATATCTTAGACA          TTTAGGAGGT GTTTA ACCTCCTAAA          GAAACAGCCGCTTTA  83 13
        uppS NONE
  CPSIT_0197 NONE
         cmk NONE
  CPSIT_0195  182608 ..  182618 -  -3.2  -3.10255   AGAAGAGTCATTTAA                 GGAA CCT CTCC                 AATACAACCATTTTC  45 11
        argS  180815 ..  180847 -  -6.3   -3.6217   CTTTAATCAGAAATA      CCCAGTTGTTAGATC GGG GATATTACAATTGGG      TGGACAAACTGAACT  64 93
  CPSIT_0192  176687 ..  176724 -  -6.5  -2.58337   AGTATACCATAACAT   GGCCTAAGGCTTTTCT AGATTAG AGAAAAGCCTTAG-CT   GTCTATCGTCTACGA  56 35
  CPSIT_0187 NONE
  CPSIT_0186 NONE
        ispD NONE
        truA  170596 ..  170608 -  -3.3  -3.16492   TGACAGCTATCAATA                TGCCT ATC AGGCT                TTTGCTAAAGAAGGA  47 178
  CPSIT_0183  169196 ..  169212 -  -3.7  -3.04263   ACCTTATTGCTAAGA              GTAGATT TTG AGTCTAC              CGCGTCTACCATTCC  47 107
  CPSIT_0181 NONE
  CPSIT_0180  167363 ..  167377 -  -4.3  -3.14463   AACTTGTCTGAGGAA               GAAGA CCAGT TCTTC               AAGGTTGTGTCTAAC  51 356
  CPSIT_0178  163069 ..  163083 -  -3.6   -5.1286   GAAAAATCAGAAAAA               GAAAAA GAG TTTCTC               CTATCTGTTATTATA  73 252
  CPSIT_0175 NONE
  CPSIT_0174 NONE
        recO  160910 ..  160934 -  -4.4  -3.68341   AACTTTACCGAAGAA         TGTTGGCGTGA TTGT TCACACCAA-A          GTTTCTACAAAAGGT  56 158
  CPSIT_0169  159299 ..  159309 -  -5.4  -3.56092   TTATGATGTTTTAAA                 GCTT GTA AAGC                 GTACTCAGAACAGGT  59 144
        pheT NONE
  CPSIT_0166 NONE
  CPSIT_0165 NONE
        hemH NONE
  CPSIT_0148  139011 ..  139027 -  -6.6  -2.59191   CTATATTTTTAGAAC              CACCTA CATGT TAGGTG              AGAATCCTGAAGCCT  57 239
        dnaB  128754 ..  128781 -  -2.2  -5.09245   CTAAAATTATAAAAA        CTTTTG-TTTTAA CCG TTAAATTCAAAAG        CCGCGTAGTTTCTAA  67 6
        gidA NONE
  CPSIT_0136  125701 ..  125735 -  -2.9  -4.10657   TGATAGTTTGGAAAA     CGCTGCTATAGAAAT TAACT ATTTCTTCAGCAAAG     TCGAAATAGTGAATT  55 64
        trxA   98214 ..   98225 -  -2.2  -3.72893   TACTTGCCTATGAAA                CCTG GAAT CAGA                 TCTTTAAACTTGGCA  49 112
        uhpC NONE
        dnaE   88103 ..   88115 -  -6.3  -2.99727   TTCAACCAATTAAAG                GTTGT ACA ACAAC                GATCCAGTCGTCTCC  56 260
  CPSIT_0083   86352 ..   86365 -  -3.9  -3.88698   TACGCATAGAAAATA               TCTTA AAAC TAAGA                AGAATGCTTTGTTAT  55 20
  CPSIT_0082 NONE
  CPSIT_0081   84960 ..   84972 -  -6.3  -4.33417   TCTATTTATAACAAA                GAAAC GGC GTTTC                CTGAGGGCTTTATGG  74 385
  CPSIT_0079   83319 ..   83331 -  -3.4  -3.80279   TCTAGAAATACATAA                CGTA GTAGA TACG                GGAACCTTAGAACTT  52 191
  CPSIT_0070 NONE
  CPSIT_0069   71770 ..   71787 -  -4.2  -3.58905   ACCTTGGAGAGATAA             CTTTAG GCCATG CTAAAG              TCATTCTTACCCTTG  52 379
  CPSIT_0067   70182 ..   70197 -  -3.3  -2.91094   AAAACAATCAGCATA              CATCT GCCTTA AGATG               CCGGTTTGTTATCCT  44 202
  CPSIT_0065   68896 ..   68920 -  -5.6   -4.4017   GGAATTGTTAGAAAA          GCTTCCTCCT GTAGA AGGTGGAGGC          GATATGGTCTCCATT  70 497
  CPSIT_0058 NONE
  CPSIT_0057   58110 ..   58137 - -12.8  -5.86061   TGGTAGCAAAAAAAA        TCAGAACCCGGA GACT CCCAGGTTCTGA         TAGCGGGACAAAAAG 100 64
        rpsB NONE
         tsf NONE
        pyrH NONE
         frr   54503 ..   54529 -  -2.4  -5.06735   GACAAAGGAGAAAAA         GGTTTTTTTA AGAAATA TAAAAGAACC         AAGAATAATCAATTG  67 332
  CPSIT_0049 NONE
  CPSIT_0048   52556 ..   52572 -  -8.1  -3.32844   GGGTCTATTTCATAA              TGTGAAT CAA ATTCACA              CCCTCTTTATTTTAC  70 306
  CPSIT_0031 NONE
  CPSIT_0030 NONE
  CPSIT_0029   33907 ..   33923 -  -2.9  -4.59773   GGGTAGGGCTAAAAA              GTAGGAG ATT CCCATAC              TACTCTTTATAAATA  60 25
  CPSIT_0028   33441 ..   33451 -  -2.6  -2.83504   TTTTTATTAAAACAT                 TTTA AAA TAAA                 GAAGCTTATGGTTCT  42 187
  CPSIT_0027   32312 ..   32322 -    -4  -2.65906   TGTAACTTAAAAAGT                 CTTT CAT AAAG                 TAATCCTATAACTAA  45 139
  CPSIT_0026   31958 ..   31997 -    -5  -4.24002   CTTTAAAGTTGAAAA  GCTGTCAAATAGAAGAAA AGTC TCCCTTCTTTTTGCCTGC   GGAGTTTCCGCAGGC  64 110
        kdsA NONE
  CPSIT_0023 NONE
  CPSIT_0022   29623 ..   29635 -  -3.4   -3.7732   TTGTTAGATTAATAA                GAGA ATGAA TCTC                CAAGGTAGTGCTGCT  52 6
  CPSIT_0019   23893 ..   23914 - -13.1  -5.05782   ATGTATGGGAAAAAA           GGGAACTTC AGAA GAAGTTCCC            TAATGCAATAAGTTA 100 42
  CPSIT_0014   17677 ..   17689 -  -6.3  -4.76963   TCATAGAACATAAAA                GAAAG TTT CTTTC                TTCCAAAAAGAGAGG  80 77
  CPSIT_0012   15511 ..   15521 -  -5.4  -3.30658   CTAGATCAAAAACTA                 CAAC CTG GTTG                 GACAACTAGATTAAT  56 348
  CPSIT_0010 NONE
        recB    7617 ..    7636 -  -2.8  -4.25283   ATGCGGTGATGAAAA            TACCTTAC TTTT GCGAGGTA             CATTATCAGGAAAAG  57 305
  CPSIT_0003 NONE
        nqrA     991 ..    1003 -  -6.3  -3.03243   AGTCAGTGGTGAATA                TGCTA TGA TAGCA                GCAGCTTCTACTATG  56 182
