   CKO_00001 NONE
   CKO_00002 NONE
   CKO_00003 NONE
   CKO_00004    3746 ..    3767 +  -3.1  -5.60993   TTACCAATACACACT           TA-AGCGACT TTC AGTTGCTGTA           TTTTTTTCTCACGGC  82 70
   CKO_00012   12969 ..   12990 + -17.3  -3.82218   TCAAGCCGCACCGAA           GGGGAGCGG GCAA CCGCTCCCC            TTTCATCATCTGCCT 100 303
   CKO_00015 NONE
   CKO_00016   14038 ..   14051 +  -4.5  -3.49295   TCCCGCGCTATTCCC               GCCGT GAAT ATGGC                CTTCTTTTTTTAGTG  53 19
        emrD   15573 ..   15585 +  -6.9  -5.14563   CAGCCGCCAACCCAA                CTGGC ATG GCCGG                TTTTTTGCTGCCAGC  91 268
   CKO_00020 NONE
   CKO_00021   20264 ..   20299 +  -7.7  -3.74693   TCACTGACCTTAACG    CAGCATCGC-CATC AGCTCCATC GGTGAGCGATGCTG    TTTGATCAGATCCCG  69 44
   CKO_00027   26607 ..   26620 +  -2.3  -3.87815   TCGACGGCCACCTGC               TGGCT CATC AGCCC                TTTCTGGAACTGCGG  52 191
   CKO_00030 NONE
   CKO_00032   32511 ..   32524 +  -3.1  -5.17054   GAGGGTAATGCGGTA               GTGGT TGTC ATCAC                TTTTTTCAATGTTAT  79 319
   CKO_00035   33348 ..   33364 +  -2.2  -3.65224   GTCTATCGCATAGAC              TGGGTG AACAG CACACA              TTGTTAAAGTGCGAT  47 2
   CKO_00036   34293 ..   34306 +  -2.3  -4.77036   AGCGGCATATCGCCT               GCCTG TTTC CAGCC                TTTTTCATCCTGCGG  68 511
   CKO_00039 NONE
   CKO_00040 NONE
   CKO_00041 NONE
   CKO_00042   40872 ..   40882 +  -5.4  -3.73072   TATGCCACACCGTCT                 TCCA GGT TGGA                 TTTAGTGACAAAATT  58 182
        rnpA   49073 ..   49107 +  -3.5  -3.62096   GCCGTTTCACGCCAA    CCTGCTCAA-GCTACG GAAT TGAGGCATTGCGCAGG     TTTGGAGTGATAAAA  51 95
   CKO_00051   50930 ..   50947 + -12.7   -5.4505   GAACAGCGATGACAG             GGCGGTC AATT GACCGCC              TTTTTTATTAGCAAA 100 82
        trmE NONE
   CKO_00053 NONE
   CKO_00054 NONE
   CKO_00055   54657 ..   54672 +  -2.4  -4.04397   GTCAGAAATGTAAAA              GTCGCG TAAG CGCCGC               TGTTTTTGTCGAACT  55 62
   CKO_00056 NONE
   CKO_00057   56165 ..   56209 +  -3.5  -3.28712   CAGGCCGGATAAGGC GTTTGGCCGCCATCCGGCTA TCAAAT TTGCCTGATGGC-GCTACGC TTATCAGGCCAGGAC  47 63
   CKO_00060   58477 ..   58487 +  -8.2  -3.28712   CAGAATGCCGGATGC                 GGCG TAA CGCC                 TTATCCGGCCCACAA  65 82
   CKO_00068   67965 ..   67991 +  -8.9  -3.28712   GTCTTTCAGGGAGAC        GTATTTACCCGG AGAA CCGG-TAAATAC         TTCTGCCACGAAGAA  65 522
   CKO_00072 NONE
   CKO_00074   72605 ..   72626 +  -3.7  -4.65895   CTGCGGAAGCAAGAC           CGTCAGCAA TTTC TTTTTGACG            TTTTTCGATGGCAGC  69 150
   CKO_00084   80463 ..   80475 +  -4.7  -3.05715   CAGGCAAAAGGCTTT                CGCGC ACT GCTCG                TTAAATCCGCCCATT  47 462
        trkD   85157 ..   85183 + -15.8  -2.58544   TTAAGCCTTTTAAAG         TGCCGGGCGGCG CAG CGCCGCTGGGCA         ATTATCCCCGTCGCA  90 37
   CKO_00088   85734 ..   85752 +    -3  -3.15544   GCCGGCGTCACGTTC             TGAGGCCA TCA TGGACGCA             TTACTGCAACTCAAA  45 23
   CKO_00089 NONE
        rbsC NONE
   CKO_00091   89231 ..   89255 +  -8.5  -2.84051   AAGAAAAGCAGGGCA          CGCGCCACC CTAACCC GGTGGCGCA          CTTTACTGGACATCC  62 121
   CKO_00092 NONE
   CKO_00093   91414 ..   91439 +  -9.7  -2.65298   AGCTGCTGCGTGACG         GCCAGCAGACTG TTG CCG-CTGCTGGC         GTTATCATCGGTCAG  63 232
   CKO_00096   93873 ..   93884 +  -5.8  -3.73224   GAACGGTAACAGGAA                GCAG CTTG CTGC                 TTTGCTGACGAGTGG  61 445
   CKO_00104  100417 ..  100429 +  -6.9  -5.47821   CGATTAATAAAAAAA                GGGCG AAA TGCCC                TTTTTTTACGTCAGT  91 34
   CKO_00106  102430 ..  102453 + -13.8  -6.10489   CTTAACGAACTAAGA          CCCCCGCACC GAAA GGTCCGGGGG           TTTTTTTTTGACCTT 100 249
   CKO_00107 NONE
        ilvM NONE
   CKO_00109  105412 ..  105433 + -11.6  -3.53012   TAAATTAAAAATAAA           TGGGACGG CACGCA CCGTCCCA            TTTAACAGACAGACA  86 38
   CKO_00110 NONE
   CKO_00111  108994 ..  109010 +  -9.4  -5.60993   AGAACGCATCAATAA              GCGGCT CATGC AGCCGC              TTTTTTTGTGCGCAA 100 156
   CKO_00113  111578 ..  111600 +   -12   -5.1963   CCATCAGGCAAAAAA           GCCCGGAG TATGAAC CTCCGGGC           TTTTTATTAGTTGCG 100 116
   CKO_00114 NONE
   CKO_00115 NONE
   CKO_00117 NONE
   CKO_00118 NONE
   CKO_00119  114296 ..  114319 +   -11  -3.18264   CTGATTAACGCTTTC          CAGGCTGTCT GAAA GGGCAGCCTG           TTACTCCCTCGGCCC  77 37
   CKO_00120  116470 ..  116496 +  -8.8  -3.79747   AATGAACGTCCAAAG        GCCAGTGGACA TAGCTT TG-CCACTGGC         TTTCCTGATCGATCA  76 90
   CKO_00123  119700 ..  119746 +  -5.1  -3.10715   GACGGAAGTTTCATG TTCGGGTGGCCAG-CATTCTAA ATTA TTCGGATGACTGGACGCCCGGC TTGAGTCGTGCTAAC  50 41
         rho  121304 ..  121323 + -13.6  -5.46706   GGCTGATACCGAAAA            CGCCACGT TTTT ACGTGGCG             TTTTTCTTTTACGAT 100 45
   CKO_00125 NONE
   CKO_00126  123686 ..  123713 + -11.3  -3.01924   ATTTAGCAACATCTC        AGCAGTGAGGG GTTAGG CCCTCACTGCC         TATTCGAAGAGAATC  75 35
   CKO_00127 NONE
        wecC NONE
   CKO_00129 NONE
   CKO_00130 NONE
   CKO_00131 NONE
   CKO_00132 NONE
   CKO_00133 NONE
   CKO_00134 NONE
   CKO_00135 NONE
   CKO_00136  134381 ..  134395 +  -4.3  -3.56162   TTTTACACAAAACAT               GCATT TTTTT AATGC               TTCATTTGCCATTTT  53 109
   CKO_00137  136351 ..  136379 +  -5.1  -3.53811   AAAGCAGTACATCGG        CGAGTAGCGCAGC TTG GTAGCGCAACTGG        TTTGGGACCAGTGGG  56 487
        cyaA  144147 ..  144161 +  -4.2  -3.31248   CGGCAATAAAACTTA               GCGG AAGCTCA CCGC               TTCTCCAGCCTGTTG  51 108
   CKO_00150 NONE
        dapF NONE
   CKO_00152 NONE
        xerC NONE
   CKO_00154 NONE
        uvrD  150282 ..  150310 + -14.7  -3.95817   TCTGCTAGCCTTATA        CGCTGAAGGGCAA TAA TTGTTCTTCAGCG        TTTCGTTGCGTGTTG 100 72
   CKO_00157  151605 ..  151621 +  -3.5   -4.4648   TAGGCCGGATAAGCG              ACGCGCC ACC GGCACGC              TTTTATCCTCGAACT  65 85
   CKO_00160  154105 ..  154126 + -12.3  -5.27335   TTGCAGTTTCTTTCG           CAGGCGCTG AAAA TAGCGCCTG            TTTTTATTTCAGGCA 100 67
   CKO_00161 NONE
   CKO_00162 NONE
   CKO_00163  156901 ..  156917 +  -7.9  -3.16564   CGACGTACTGCATCA              GCTGCGG CTC CTGCGGC              TTGATAAACTGCGGA  62 173
   CKO_00166  158443 ..  158453 +  -8.2  -3.77241   TAACTAATTCATCCA                 GCGG AAA CCGC                 TTTGCCTTGAGGTTT  72 34
   CKO_00167  159275 ..  159287 +  -2.7  -3.54146   TAAGCTCTTTTTGCG                GTAAT GCG ATTGC                TCTTTAGTTGACCAG  49 22
   CKO_00168  160391 ..  160404 +  -5.9  -2.57132   CTACCCAGTGTGGCA               GGGCG GCAA TGCCC                ATTCTGGCGGCGACC  49 158
   CKO_00171  163853 ..  163872 +  -8.6  -2.91322   CGCTTTGGCGTTTGC            TGCGCGCAG CGC CTGC-CGCA            TGGTTTCGACGGTAT  59 269
   CKO_00173  165556 ..  165572 +  -9.4   -5.2853   CCCTTCCCCACGAAA              GGCCGA CGCGT TCGGCC              TTTTCTTTTTGCGTA 100 46
   CKO_00174  167133 ..  167154 +  -3.6  -3.11291   GGAGCCCGGTTGAAG           GGTAGGGC AAATTG GCCCAATC            TGTTACACTTCTCGA  45 56
        ubiE NONE
   CKO_00177 NONE
        ubiB  170230 ..  170246 +  -5.1  -2.57136   CATCGCTCAAGGCAA              GTCGTGT ATA ATGCGAC              CTTAATAATTCATCA  47 47
        tatA NONE
   CKO_00180 NONE
   CKO_00181  171886 ..  171907 + -15.9  -3.48276   ACTGAAGAATAAACG           CAACCGCCC GTCA GGGCGGTTG            TTATATGGGAGGAAG 100 29
   CKO_00182  172980 ..  172993 +  -5.9  -3.23692   GCACGAAGTGGCTGA               CGCCG CGTG TGGCG                TTGATCGTGGTGGTA  54 299
   CKO_00184  174921 ..  174937 +  -3.5  -3.10545   CTTTAACGACGGTAA              AGGCGCC TGA GGCGCGA              TCGTTTTGCCCTATA  45 16
         fre  175650 ..  175664 +  -3.5   -4.0371   GAAGATCGCCTGTTT               GGCGA TGCGT TTGCC               TTTATCTAAGCAATA  59 2
   CKO_00190 NONE
   CKO_00191 NONE
   CKO_00192 NONE
        hemG  183836 ..  183847 +  -5.8  -3.73224   GAACGGTAACAGGAA                GCAG CTTG CTGC                 TTTGCTGACGAGTGG  61 483
   CKO_00197  190740 ..  190760 +  -8.2  -4.98531   ACCCTCACAGGAAAA            ACCCCGTC GCAGG GACGGGGC            TTTTTGATTTACAGA  91 365
   CKO_00203  197447 ..  197471 +   -10  -3.29511   TAGGCCGGGTACTCG         GCGTAAGCGCC TGAT GGCGC-TGCGC          TTATCCGGGCCTGCG  71 95
   CKO_00205  198955 ..  198973 + -13.1  -5.63374   CTGATAACATAAAAA             CGCCGGG TTAGC CCCGGCG             TTTTTTTACTCTTCG 100 47
   CKO_00207  201344 ..  201361 +  -2.7  -2.50784   CAGCAGATTATTCGA             TACGC GGAAGTTA GCGTA              ATATTCGTCGATTTC  40 184
   CKO_00209 NONE
   CKO_00210 NONE
        rseB NONE
   CKO_00212  205969 ..  205985 +  -3.6  -3.04792   AAGCAGACCTCCCAT              GCCCGA TAAGC TCGCGC              TATTGGGCGTCATGC  45 87
   CKO_00213  208004 ..  208025 +  -5.1  -2.68015   ATCCTAAGGAGTTGG           CATGGCGAA TATG TTTGCCCTG            ATTCTGGTGATTGCC  47 40
   CKO_00214  208993 ..  209025 + -15.8  -4.22554   AATTTCTGATAATCG      TTCATGTTGTCGTC ATTGC GGCGACAACATGAA      TTATTTATTGGATAA 100 39
         era NONE
   CKO_00217 NONE
   CKO_00218 NONE
        acpS  212692 ..  212708 +  -5.1  -2.75064   ATAAGGCGTTTACGC              CGCCA TCCGGCC TGGCG              TCATTCCATCAGGGA  47 62
        murQ  214953 ..  214974 +  -9.4  -3.09492   CTGGTAACGATTATC           GCCGGGTT TCGGTT GACCCGGC            TATTGGGCTTCAACA  67 78
   CKO_00223 NONE
   CKO_00224  216536 ..  216550 +  -7.8  -4.18018   TTGTTTCTGGCTGAG               CAGCGG CAG CCGTTG               TTTTACATCGGCCCA  74 359
   CKO_00226  222032 ..  222047 +  -6.8  -5.78622   CCATCCGGCAAGGAA              GCTTCC GTGA GGGAGC               TTTTTTTTGCCCTGC 100 116
   CKO_00231  224042 ..  224054 +  -3.3  -2.72049   TCTGAAGCGATTATT                TCCCC GAA GAGGA                TGGTTAGCGAGTGTG  43 87
   CKO_00232 NONE
   CKO_00233  226097 ..  226115 +  -2.4  -2.95192   TTTTCATGCCGTAAA             GTAGCGTG AAT TATGTTAC             GTTTATCAGATTAAA  42 41
   CKO_00234  226481 ..  226505 + -14.3  -2.71731   TACCGGCGAAGAAGA          CGACGCGGC AATTTAA GCCGCGTCG          TGCTTGCCGGATGGC  86 10
        glyA  229381 ..  229412 + -15.4  -3.57144   ATACGCCTGGCATCG      TGAAAAAGGCTTCC TGCG GGAAGCCTTTTTTA       TTTCCGGGTCACGCC 100 44
   CKO_00239 NONE
   CKO_00240 NONE
   CKO_00241 NONE
   CKO_00242 NONE
   CKO_00243  237951 ..  237973 +    -7   -3.4252   TGCCTGTCAGTAACA           CGATCTGC TTTTCGT GCAGGTCG           TTCTCCTGCATCAGC  61 274
   CKO_00246 NONE
   CKO_00247  240820 ..  240836 +  -5.1   -3.1505   TCAAACGATTAACGC              TTCAGCG CAT CGCTCAA              TTCGTCACGCATGCT  52 137
   CKO_00249  242579 ..  242602 +  -3.2  -3.73402   AAATACCTGACTAAA          TTAGTCAAGT AAAT AGTTGACTGA           TTTAGTCGGGAATGT  52 138
   CKO_00250  243343 ..  243362 + -12.1  -2.81464   ATTTCAGAATCAGGC            CGGGGCG TTTACT CGCCCCG             TGTACTCGGTCGTAC  77 179
   CKO_00251 NONE
   CKO_00252  245159 ..  245181 +  -4.1   -3.0814   AAGGGTTTGGCCTGC          GCCTGGGGGT GAGA ACTTCC-GGC           TGTTCAGGTATGGCT  47 122
   CKO_00253  245419 ..  245445 +  -8.7  -4.68908   CGTGCTTACCGATAA        CCCCAC-CGTGG TCAC CTGCGCGTGGGG         TTTGTTTTACCTGAC  84 41
        hscB NONE
        hscA NONE
   CKO_00256 NONE
   CKO_00257  248435 ..  248456 + -11.5  -4.39166   AGCTGAATAAATAAA           CGGGCTGCC CACG GGTGGCCCG            TTTTCCTGTATGCGC  95 31
   CKO_00258  249796 ..  249826 +  -3.9  -3.17075   GCCGGATAAGCGTTA      GCGCCATCCGGC AAGATAAC GGCGGG-GGCGC       TTCGCTTGCCCGCCC  47 49
   CKO_00260  250999 ..  251017 +  -4.4  -2.50994   CCGGGAATATGGCCA             CGCTTCAG ACC CGGACGCG             GTTCATCGGCTTCGG  43 381
   CKO_00262 NONE
   CKO_00263  259072 ..  259082 +  -2.6  -3.16676   CTAATACTCATCTTA                 TTTT AAA AAAA                 TGTTACCTTCATCCA  45 63
         ndk  259675 ..  259699 +  -4.2  -3.30124   CGCCATCAGGCAGTC         GCG-CAATGCC GGAT GGCGCTGACGC          TTATCCGGCCTACGA  51 86
   CKO_00267  259808 ..  259846 + -14.7  -5.02074   TAGAATTTGTACAAT  GCAGCGCCCCAGGATGAGC ACC GCTCA-C-TGGGGCGCTTC  TTTTTTCAACCCTCC 100 9
   CKO_00268  261073 ..  261107 + -10.8  -3.25919   GCGGTCTGATACGGC     TTGCGCCATTGTGTGT TTT GTGTACAGTGGCGCAA     TGTTGGTTGAATGAT  74 32
   CKO_00269 NONE
        ispG  263553 ..  263598 +  -6.1   -5.0916   CTTCCCGTGTATGAT TGAACCCGCATGGCT-CCCGTA TCG TTTGGGAAGCGCTGAGGGTTCA TTTTTATATTCAGAA  83 63
        hisS NONE
   CKO_00273 NONE
   CKO_00274  266743 ..  266775 + -17.1  -3.90048   ACGGCCGCACGCTTT      GAAAAACGGCTCCTG GTG CAGGGGCCGTTTTAC      TGTTTTTAACAACGG 100 46
        engA  268335 ..  268351 + -10.8  -6.11229   CTGACGTTGATAAAA              CCCGCG CCTGT CGCGGG              TTTTTTTGTTTTGCT 100 47
   CKO_00276 NONE
   CKO_00277  270573 ..  270625 +  -8.4  -3.90291   CACTTCGCTTTCCAC CCAGCCGTCTGACAGCCGGGTGGTG AGCA CATCACC-GGCTTTCACCTGTCTGG TTTGCTTCAGCACCT  71 85
   CKO_00279  273518 ..  273540 + -14.9  -4.56113   GGCTCCTGATTTTCT           TCGCCCGAC CTCGT GTCGGGCGA           TTTATTTAATCTGTT 100 32
        guaA  275206 ..  275225 +   -10  -5.71295   CAGATTCATCATTAG            CCCTCTGT AATT GCAGAGGG             TTTTTGTTTTTATGT 100 74
   CKO_00281 NONE
   CKO_00282 NONE
   CKO_00284  276604 ..  276625 +  -2.3  -5.40014   GTTGATAACTAGAAT           CAA-GACACA TAT TGTGACGTTG           TTTTTATTATTATTT  76 86
   CKO_00285  279319 ..  279331 +  -2.6  -4.10657   TTCCTGGTTAAAACC                CGGC AAATC GCTG                TTTTGCAGAATATAG  56 390
   CKO_00290 NONE
        celA  286210 ..  286235 +  -8.3  -4.51699   CAATATGTTGTTATT         CA-GCCCCGC CATCTGT GCGGGGCGTG         TTTTATACTCATTCT  81 45
   CKO_00293  287019 ..  287037 +   -11  -5.81412   AATGAATAATAAAGA             GCCGACTT TAA GAGTCGGC             TTTTTTTTGAATAAA 100 44
   CKO_00294  288386 ..  288407 + -13.7  -3.56273   GCAATAATCCTGAAA           CCGGGCAGT GCTT GCTGCCCGG            TTCTATCGTGATGGA  93 34
   CKO_00295  289649 ..  289673 +  -4.2  -3.89756   AATGGCGTCGGCCAG         CACCAGCCGTC CTTC GGCGTC-GGTG          TTATTGATTTCCACT  58 499
   CKO_00300  294135 ..  294169 +    -7  -3.57144   CATCCCTAACATACG     CAGCAGTTCACGCAGC GTC GCTGCGTCGGCAGGTG     TTTCCAGGTAAAGCA  60 235
   CKO_00303  297129 ..  297152 +    -3  -3.26262   TCACTCTGCCCGGTG          GCGCAACGTC ATCG GGCGTTCCAC           GTTTTATCCGCTTTC  45 50
   CKO_00304 NONE
   CKO_00305 NONE
   CKO_00306  299582 ..  299626 +   -18  -2.58544   CGTTTGAATAAACGA CGCGTATGCCGGATGGCGGCG TAAA CGCC-TTATCCGGCATACGGG GTTGTGCGAATCAGG 100 30
   CKO_00309 NONE
   CKO_00310  302819 ..  302838 + -13.6  -5.34555   CAAGTAAAAATTGAG            GGGCTGGA GCAA TCCAGCCC             TTTTTTCTGATATGA 100 34
   CKO_00311  303735 ..  303756 + -12.3  -4.96848   CCCCGTCAGCATCAA           CCGGAGAGT CAAC GCTCTCCGG            TTTTTCTCTACCACC 100 47
   CKO_00312  304688 ..  304700 +  -3.4  -4.62069   CGGCACAATGTAATA                CCTT CGGCA AAGG                TTTTTAACATACCGG  67 6
   CKO_00313  306715 ..  306726 +  -4.4  -5.09895   TTACGCGAACGCGTT                TTGC AATG GCAA                 TTTTTTCACTAACTC  79 2
   CKO_00314  308007 ..  308025 +  -6.7  -4.63007   CGTCGGACGTTCCAC             CCGTAGT GAGTA ACTGCGG             TTTTATCTCATTATA  78 522
   CKO_00325  317108 ..  317155 +  -4.1  -2.87211   AGCGCGCAGACAAAA CCGACCTTGCGGCGTAAGA TTACCTGTCT TCTTACGCTGTGGAGCCGG TATGTCGCAAAAAAT  46 68
   CKO_00326  317721 ..  317740 +  -2.2  -3.28969   TTGCATTCCTCCTCG            CTAATTTA TTGA TAAATAAG             GTTTATATTTCTTTA  43 14
   CKO_00327 NONE
   CKO_00328  319331 ..  319365 +  -9.2  -2.54325   TTTCCATTTCAGACC     CGGTGGCAATCAGGAT CAC ATCCGGCTTACCGCCG     CTGTCTTTCAGCACA  64 283
   CKO_00332  324549 ..  324566 + -14.1  -5.68438   CTTTAATTCATTCCG             GCGCGGG GTTC CCCGCGC              TTTTTTATTTCCTCC 100 46
   CKO_00333 NONE
   CKO_00334 NONE
   CKO_00335  326175 ..  326189 +  -2.1  -2.89055   CCTGCGAACTGGCAG              TCCTGC TAAG GC-GGA               TGTATGAAGGATTTC  40 17
   CKO_00336 NONE
        eutD NONE
   CKO_00338  328384 ..  328432 + -16.7  -2.57931   CGGAGAAGACGCAAA CGCGTCGCCATCCGGCAATGA GATGGCA TCGATGCCGGATGGCGCCTCG CTTATCCGGCCTACA  95 70
   CKO_00339 NONE
   CKO_00340  330168 ..  330178 +  -6.8  -2.66316   CTGCGTGTTGGTGGA                 TGCG TTT CGCA                 TCGTCTGATACCGGC  55 7
   CKO_00341 NONE
   CKO_00342  332272 ..  332320 + -12.3  -2.57931   GCCCGATAAGGCGTT CGCGCCGCCATCCGGCAAAAACG CGG CACTATTGCCTGATGGCGCTGCG CTTATCAGGCCTACG  78 58
   CKO_00343 NONE
        eutA  334980 ..  334997 +  -4.1  -2.58544   GAAATCACTCGCATT             TCCTTCC TGAG GGAACGA              CTTATGAAACTAAAG  45 16
   CKO_00345 NONE
   CKO_00346  337329 ..  337346 +  -6.3  -3.08133   TGATTCGACCGTCGG             TCAC-CGC AAT GCGCGTGA             TTGCCTCGGTGAATG  55 66
   CKO_00347 NONE
   CKO_00348  338479 ..  338500 + -13.7  -3.58343   TAACCTGTCGGAGGT           GCCGGGGACG TTG CG-CCCCGGC           TTTGAAGATCATGAA  93 38
   CKO_00349  339585 ..  339597 +  -9.1  -3.30124   TATTGTGCCGGATGC                GACGC TTT GCGTC                TTATCCGGCCTACGG  70 47
   CKO_00352 NONE
   CKO_00353 NONE
   CKO_00354 NONE
   CKO_00355  343218 ..  343235 + -11.3  -4.31587   CAATACGCCCATCAA             TGCCACG CAGC CGTGGCA              TTCTTATTTTTCAGG  91 80
   CKO_00356  344554 ..  344569 +  -7.6  -2.73124   CTCCGGCGAGGATTG              CGTGAA CATT TTCACG               GTTTCCGGGCTGAAC  55 422
   CKO_00360  348574 ..  348590 +  -2.1  -2.75957   CATCAGCCGGGTTGC              TGCCGCC AAA GGAGACA              TCATTGCCGTTCGTC  39 58
   CKO_00363  350706 ..  350722 +  -4.3  -4.61916   TTTACCCTAATTAGT              GAGCTGT TCC GCAGCAC              TTATTTGTTTTTTCT  69 57
   CKO_00364  351655 ..  351681 + -10.9  -3.84992   CTGATTAACGCCGCT         TTCCTCCTCAC CGCAT GTGGGGAGGGA         TTCTCTTATTCCCTT  87 37
   CKO_00365 NONE
   CKO_00366 NONE
        cysW NONE
   CKO_00368  355594 ..  355612 +  -4.4  -2.58714   CGAAGAGGAGCTTGC             TCTGGCAG AAT CGGCCTGA             TAGGTTAATATCACG  45 7
        cysM  356697 ..  356709 +  -9.1  -3.30124   CGATCGCCGGATGAC                GACGC AAA GCGTC                TTATCCGGCCTGCAA  70 86
        pdxK NONE
   CKO_00373  360053 ..  360070 + -12.7  -4.65895   ACCAGGATAAAAAAA             TGGCGCC AGTC GGCGCCA              TTTTTCCCTGCGGCA 100 144
   CKO_00378  363009 ..  363024 + -10.4  -5.08011   GCAGGCCACAAAAAA              GCACCC AAAA GGGTGC               TTTTTTACGCGTTTT 100 183
   CKO_00381  366260 ..  366276 + -10.8  -5.38249   TCCCCCCTTTCTGAA              CCCCCG CCTGT CGGGGG              TTTTTTATCATTGAT 100 56
        ligA NONE
   CKO_00383  368900 ..  368935 +  -3.9  -4.11394   CGGCTTCGCTGAATG    CGGAATAGACGACCA GCAGAA TGGAGGTCTGGTCCG     TTTTCGCAATCCACT  60 390
   CKO_00385  370686 ..  370702 +  -2.9  -5.11389   TTTTAATTTGCGTCT              GTATCAG TTC CTGCTGC              TTTTGTTTCTCTTCT  76 165
   CKO_00387  371043 ..  371078 +  -4.1  -2.74604   CGGTATTGGTAATCG    GTTGGTTACTCTCGTT ATAAC AACGAC-GTACCCAAC    GTATTTATCGATTAT  45 6
   CKO_00389  371960 ..  371985 +  -5.3  -3.53012   TAAAACACAAAATAA         TAATGGCCCTG CTTG CAGGGCCGTAC          TTTACGGCAAGGAAC  56 38
   CKO_00390  373274 ..  373294 + -11.1  -3.57792   CACTAACGGCTGAAA            CGGCGGG GCGACTG CCCGCCG            TTTCAACGTCCCTGA  82 78
   CKO_00391  374292 ..  374308 + -11.5   -4.7629   CGCGCATAGCAAAAA              GGCGCCT TTA GGGCGCC              TTTTTACATTGGTGG 100 71
        gltX  376406 ..  376436 +   -19  -3.03124   GGTGTATTAACCGTA       GGCCGGATGGGGGT TGC GCCGCCATCCGGCC       TGTTGCCCGATGGCG 100 41
   CKO_00401  380198 ..  380209 +  -5.8  -3.23979   AGTTTCAGACCAAAA                CGTG AAAC CACG                 TTGCCTTGCTCTTCG  54 182
   CKO_00404  382969 ..  382990 + -14.5  -4.72986   AACACAATTCGAAAA           TAGCCCCGT TTGA ACGGGGCTA            TTTTTAATGACGGTG 100 101
   CKO_00406  383419 ..  383437 +    -9  -2.80522   AATCATGAGTGAGAG             CACTTTTT GCT AAAAAGTG             ATTATTGGCTGCCGT  65 33
   CKO_00407 NONE
   CKO_00409  386311 ..  386322 +  -5.8  -3.05384   TCGTGGCGGTTGACG                GCCA TCAT TGGC                 TTGCCTGCCAGCAGG  52 61
   CKO_00410  387653 ..  387664 +  -2.2  -3.29511   GGGGAGCTCGCCTTT                CGAC CGTT GTTG                 TTATGCCCCCATGAA  43 66
         glk  388766 ..  388782 + -13.7  -5.61596   TTATCCGGTCTTAAA              CCGCGTC ACT GACGCGG              TTTTTTTGTGCCCGT 100 97
   CKO_00413 NONE
   CKO_00414 NONE
   CKO_00415 NONE
   CKO_00416  392642 ..  392669 +  -4.9  -3.16676   TACGCGTGAGACTGT        CGTTCATCTTA CGGATT TCAGATGAGCG         TCTTGCGTTAATCAG  52 1
   CKO_00417  395270 ..  395282 +  -6.2  -3.31799   CGTTTTACGTGTACA                CCGC ATCCG GCGG                TTATGCCCGGTTATC  59 107
   CKO_00421  400363 ..  400382 + -13.6  -5.17353   GAGTAGAAAAGCAAA            CAGGAGCC ATCT GGCTCCTG             TTTTTTGCTGCATCT 100 35
   CKO_00424  402441 ..  402459 +    -6  -3.02204   TTTATTTTCCTGCAT             TGATCGCT ATG AACGATCA             TCATTTGAATTTTAA  52 23
   CKO_00426  409661 ..  409677 + -11.5  -5.00895   TTTAAATAGCAGAAA              GGGGGCG TCG TGCCCCC              TTTTTCTGTCGTGAG 100 32
   CKO_00427 NONE
   CKO_00428  411941 ..  411973 +   -18  -2.99319   ACTTTATCGATATAT      CATGCGCATATTAC CCGGA GTAATATGCGCATG      TATATATCAGGACTT 100 59
   CKO_00433  415793 ..  415805 +  -2.7  -4.97666   CACTGTCTTTTAAAA                TGTGA CAA TCATA                TTTTTCTCATGTCTT  72 115
   CKO_00434  417210 ..  417233 +  -8.2  -2.60904   GACTGGAAAAACCTA          CGATAAAGGA CACA TCCATTATCG           GTGTTCTGGTTGTCG  61 344
   CKO_00435  418646 ..  418667 +  -9.4  -4.68994   TTTGTTGAAAAGAAA           CCCCTGCA CAAAAA TGCGGGGG            TTTTTAAATGATGAT  89 43
   CKO_00436  418919 ..  418935 +  -5.8  -2.90496   GTCATCACCATGTAT              CGGCCT GCCTG AGGCTG              TGGTTTGCAGGGACA  50 100
   CKO_00437 NONE
   CKO_00438  423121 ..  423149 + -13.3   -3.7956   CGCAGGATAAAAAAG        CAGGCGAATAC CTTATTC GTATTCGCCTG        TTATTGAATTATTTG  95 31
   CKO_00441  427017 ..  427037 +  -7.5  -3.57797   GAATCGAACCTGCAA            CTAGCCCTT AGG AGGGGCTCG            TTATATCCATTTAAC  66 228
   CKO_00445  429135 ..  429154 + -12.2  -5.50499   GAGGCCAATAAAAAA            GGTGAGTC AAAA GACTCACC             TTTTTTTACGTCTGA 100 47
   CKO_00447  431196 ..  431222 + -14.5  -4.26344   ATCCCCTTCTTTGAA         TGCCCCTGTCA AATTC TGGCAGGGGCA         TTTTCGTAACCCTCT 100 40
        fadI NONE
        fadJ  434941 ..  434954 +  -3.1  -4.91109   ATGGATAAGGCACAA               TGCCGG CCA CCG-CA               TTTTTATCATACCCG  74 150
   CKO_00450 NONE
   CKO_00452  435657 ..  435670 +  -9.5  -3.23274   CGCAGGCCGGATAAG               GCGCC TGAT GGCGC                TTCGCTTATCAGGCC  71 27
   CKO_00455 NONE
   CKO_00456 NONE
        mepA NONE
   CKO_00458 NONE
   CKO_00459  440714 ..  440729 +  -2.4  -3.59979   CCGGAAGCGCTCAAC              TGAGGC CGAC GCCACG               TTTACAATGAGGAAA  47 23
   CKO_00460  441077 ..  441095 +  -9.6  -3.92832   CCGGGTGGCGTTAAC             GTTCATCC AAC GGATGGAC             TTATTTCACCGCTTT  80 75
   CKO_00462  444564 ..  444581 +  -9.1  -5.87996   TATCAGGCCTACAGG             GGAGCCG ATAA TGGCTCC              TTTTTTTATTGCTTG 100 114
   CKO_00464  446672 ..  446700 +    -9  -2.90194   CGGCTCGGTTAACTC       TCTTTC-GCG-CGC AAC GCGGCGCAGAAAGA       TCTGGTTCAGCAGAT  62 166
   CKO_00466  448782 ..  448804 + -12.7  -4.04579   AACATTCTTTTTGTC           GCTCCCTGC ATAGC GCGGGGAGC           TTTGCTATTTCTGGA  95 39
   CKO_00467  449823 ..  449840 +  -7.7  -2.62616   ACCGCGGAAAAACTG             GTGCAGG AGTA CCTGTAC              TGATGTCAGCAGTGG  58 5
        truA  450633 ..  450652 +  -3.4  -2.95384   CCAAAACGCCACTGG            GCCCGCTG TTTC TGGCGGAC             TAATTTGAGTCGTAT  45 3
   CKO_00469  451350 ..  451362 +  -3.3  -5.24531   ATAGAAAGTAACTCA                GCGGT TCG ACCAC                TTTTTTATCCAAAGT  77 37
   CKO_00470  452416 ..  452438 + -14.8  -4.73108   CCTGATAGCTGATAA           GGGCAGGGCC ACT GGCGCTGCCC           TTTTGCTTTTCTCAA 100 36
   CKO_00471 NONE
   CKO_00472  454603 ..  454628 +  -9.8  -5.27335   AGGCAAAAAGTTTGA         TGGCGTTGAA TATTTT TTCAGCGCCA          TTTTTATTTACGCGC 100 212
   CKO_00473 NONE
   CKO_00474  456789 ..  456807 +  -9.5  -3.33696   CTCTCCTCCCGGCAA             GGGTGCG CAATC CGCGCCC             TTGCTTGCAACGCCC  73 42
   CKO_00475  457472 ..  457490 + -13.2  -4.37092   GCGTTTTTGCACAAA             TTGCCCTG TTT CAGGGCAA             TTTTGTAACCGCGAT  95 58
   CKO_00477  458575 ..  458591 +  -8.7  -3.95073   GCGTGATGAGAGATT              TGCACCA TCA TGGTGCG              TTTGTCGCTGTCAAA  74 90
   CKO_00478  459649 ..  459661 +  -6.2  -2.73124   GTCGGATAAGGCAAA                GCCG CCATC CGGC                ATTTAACGGCTCGAC  53 134
   CKO_00479 NONE
   CKO_00480 NONE
   CKO_00481  461987 ..  462003 +  -9.4  -3.30635   AGGCCGGATAAGGCA              TCGCCG CCATC CGGCGA              TTATCGCCCCATTTC  70 106
   CKO_00485 NONE
   CKO_00486  465365 ..  465381 +  -2.9  -2.73441   AAAAGAAGGTTTCCT              GATGGTG GAA CAGCGTC              GTTTGGCAAGTACTG  41 80
   CKO_00487  466300 ..  466313 +  -5.2  -3.29144   TGGGCGACATATGGT               GGCG CAACAT CGCC                TTGTACCAGCCCTGC  52 405
   CKO_00489  467676 ..  467694 + -10.2  -2.69964   ACCTGACACATTACG             CGCCTGCG TGA TGCGGGCG             TACTCTACTTAAAAG  71 62
   CKO_00490 NONE
        ulaA NONE
   CKO_00492 NONE
   CKO_00493 NONE
   CKO_00494  471477 ..  471490 +  -3.8  -3.57144   ACTGGAAGGCCAGTA               CCGT AACCTG ACGG                TTTACGCCTACCAGA  51 185
   CKO_00499  476741 ..  476753 +    -2  -3.53717   TGTCCCTTGCAGTTG                TTGT TTTGC ACAA                ATTTTTGAATTTTTA  47 95
   CKO_00500  477272 ..  477291 + -10.8  -5.40072   ATTACGCATATAAAA            GAAGGCAT ACCA ATGCCTTC             TTTTTTTGACCGCAG 100 51
   CKO_00501 NONE
   CKO_00502  478505 ..  478522 +  -6.2  -5.24129   CCTGAACATGATTTA             GCCCCG CATTGT TGGGGC              TTTTTTATGGCAGAA  85 36
   CKO_00503  480427 ..  480469 + -10.8  -3.65351   CCGGATGGCGCTATT CG-CTTATCCGGCCTAC AAATGTAGCA GTAGGTCGGATAAGACG TTTACGTCGCCATCC  79 48
   CKO_00506  482979 ..  482989 +  -6.8  -3.59405   CCCCAGGAAATGGTG                 CGCA GTC TGCG                 TTGTCTGCTAATTTT  63 336
   CKO_00507  484333 ..  484366 +  -4.6  -5.63504   TGTAAGTGTAAAAAA     GGGCCGCT-GATGCT GAAAA AACATCCAGCGGTTC     TTTTTTTATACAATT  89 67
   CKO_00508 NONE
   CKO_00509  486063 ..  486075 +  -3.3  -3.21705   ATTTAATTTGCGCCT                GTCGG CAG CAGAC                TTCACTTCGCTTATC  47 35
   CKO_00510 NONE
   CKO_00511 NONE
   CKO_00512 NONE
   CKO_00513 NONE
   CKO_00514 NONE
   CKO_00515 NONE
   CKO_00516 NONE
   CKO_00517  494973 ..  494988 +  -2.5  -3.18199   TTCAGTAAGTGAGAT              GCGTG GATGAA CATGC               TTGCCTTAACCATTA  43 16
   CKO_00518  496968 ..  496980 +  -5.5  -3.53444   TTCGTTGAAAATCAG                GTCCT GAT GGGAC                TTTAACAAGGAATAA  58 173
   CKO_00519 NONE
   CKO_00520  500019 ..  500032 +  -9.5    -5.626   GCAGAAACGAAAAAA               CCCGC CGTG GCGGG                TTTTTTTATGCCCTG 100 47
   CKO_00523 NONE
   CKO_00524  502946 ..  502973 +  -3.3   -4.8667   AATGTAACCGGGATC        GCATTTCCTCC CTAAAC GGGGGTACTGC         TTTTTCTCCGCTGTA  71 39
   CKO_00525 NONE
   CKO_00526  506103 ..  506118 +  -4.6  -2.96216   CCCTGCAACAGCTGC              TGGCGC AGGT GAGCCA               TCTATGATCCTGCGC  47 3
   CKO_00527  506856 ..  506866 +  -5.4  -3.41125   AGGCGTGGTGGACAG                 TCTG GCT CAGA                 TTCTGCGTCTCTGAC  56 1
   CKO_00528 NONE
   CKO_00529  508696 ..  508706 +  -4.6  -2.62983   TGTTAGCGACGATGC                 GCTG GAA CGGC                 TGCTATGAGCCTCCG  45 7
   CKO_00530  510153 ..  510164 +  -5.8  -4.05677   CGGGAGCCGCAGCTC                CCGT GGAA ACGG                 TTATTTCGCTTCTTT  66 52
   CKO_00532  512435 ..  512454 + -12.8  -2.93492   AGCTTCTGATTTTCG            GGCGCGGC ATCC GTCGCGCC             GTTTCCTGTATGCTA  79 32
   CKO_00533  514198 ..  514236 +  -8.6  -3.31144   ATCTTACGCCACAGC   CAGCGGGTCGCGAGTTCG ATA TGCTCACGCAGCCCGCTG   TTATCCACGTCCAGC  62 462
        glpT NONE
        glpQ  520710 ..  520735 + -16.3   -3.6715   GATCTCAATATCGCC         TTTTGCCCTGC AACA GCAGGGCAAAA          TTTCCCCTTCGCTGA 100 139
   CKO_00543  528450 ..  528467 +  -8.4  -5.75945   AAATCGTGTGTGAAA             GGAGGC CATTGC GCCTCC              TTTTTTTTGCCGGAT 100 52
   CKO_00544  530178 ..  530207 +    -5  -4.36914   TACTGCGCGCTGCGG       CGCTGATGGC GCGCATGTAG GCCATTGGCG        TTTTATGCAGCAGCA  69 393
   CKO_00551 NONE
   CKO_00552  539153 ..  539169 +  -4.4  -4.07568   GGGAGACGCTTTCCG              GGGTAA ACTTC TTGCCC              TTTTGCAGCGCGGCC  62 379
   CKO_00556  542850 ..  542860 +  -3.2  -3.89505   GATTTTAGTATCATA                 TCCG TGT TGGA                 TTATTCTGCATTTTT  54 56
   CKO_00558  544119 ..  544132 +  -9.5  -5.19261   ACAATGTCAACTAAA               GGGCC TGCG GGCCC                TTTTTTAATGCGTTT 100 47
   CKO_00559 NONE
   CKO_00561 NONE
   CKO_00562 NONE
   CKO_00563  548789 ..  548817 + -14.5  -2.71731   CTGCCTGATCCTGTA        GGCCGGATAAGGC GTA GCCGCATCCGGCC        TGGTTGCCCGATGGC  86 33
   CKO_00564  550452 ..  550469 +  -2.7  -3.22298   TGGCGATTAGCGATG             CGGG-AAT GCT GTTGCCCG             TTAATCGTCAATAAC  45 80
   CKO_00565  552491 ..  552503 +  -5.5  -3.29043   GGTGTACACCACGAT                CGGCA GCT TGCTG                TTATAACGCACCATT  52 214
   CKO_00568 NONE
   CKO_00569  556577 ..  556587 +  -2.4  -4.59109   CGAAACCCCAAAATG                 GCCG CCG CCGC                 TTTTTGCGCGATATG  63 60
        napG NONE
        napH NONE
        napB NONE
   CKO_00573 NONE
   CKO_00574 NONE
   CKO_00575  560552 ..  560570 +  -2.4  -2.80935   CGGCATAACTGAAGT             TTCATTCG TTT TGATTGAA             TCTGGTGACTGAACT  40 136
   CKO_00577 NONE
   CKO_00578 NONE
   CKO_00579 NONE
   CKO_00581 NONE
   CKO_00582 NONE
   CKO_00583  565593 ..  565618 +  -9.7  -2.57003   CCACGCGGCTTGTAG         GCCCGATAAGCG TAG CGCC-ATCGGGC         ATATCTTGTTACTGC  67 70
   CKO_00588  569760 ..  569777 +  -4.7  -2.75229   GCGCGATCAGCTCCA             GCGTCGG ACGT CCGGCGG              TAATTAACGGTTTTG  47 1
   CKO_00589 NONE
   CKO_00590  570347 ..  570358 +  -7.2  -2.52516   GCAATTCATGTGCCC                GCCG GAAG CGGC                 CTTCATAATCGAAGA  55 158
   CKO_00593  572941 ..  572951 +  -2.4  -3.65351   GTTTATAGACCCGGT                 GAGC CAG GCGC                 TTTACGTCCCGCTAA  47 33
   CKO_00594 NONE
   CKO_00595 NONE
   CKO_00597  575251 ..  575267 +  -6.5  -3.14564   TGTTCTTCGCGCTGC              CCGGC GGAAAGG GCCGG              TTGATGAACGCGTAA  54 423
   CKO_00604 NONE
   CKO_00605  583169 ..  583203 + -15.9  -3.28487   GGAAATAATCGACGA    TCGCCATCAG-GAGTG AGAA CGCTCTCTGATGGCGA     TGTTAATTGATGTGA 100 10
   CKO_00609  587956 ..  587973 + -11.3   -5.5112   GTTGGTCATAAAAAA             GGACAGC CCTG GCTGTCC              TTTTTTGTTGGTGCG 100 46
   CKO_00611  589304 ..  589317 +  -2.3   -4.0896   GCCACGATGGCGATC               CGCAT CAGC AGGCG                TTTTCCCAGCCGTTT  56 347
   CKO_00613 NONE
        fruK NONE
   CKO_00615  594402 ..  594415 +  -3.8  -5.26918   TTAGCGTCGCCATCC               GGCA TTTCTC TGCC                TTTTTTATCCCCTCT  77 121
   CKO_00616 NONE
   CKO_00617  596572 ..  596589 +  -6.2  -3.74693   CCCGCGATATCAAAA             CCTGGC TTTCAC GCCGGG              TTTCCTGGCATGAAG  64 68
   CKO_00619 NONE
   CKO_00620  598045 ..  598070 +  -8.3  -2.57881   TGACGCACTCCGTAG         GCCTGATAAGCG CAG CGCC-ATCAGGC         ATTATGCCAGGGTTG  61 38
   CKO_00627  602151 ..  602177 +  -2.3  -2.91144   TCCAATGCCTTACAG        CGTTTTTTGCGC TACT GCG-AATAAGCG         TCCTTTGCCGGATGG  40 2
   CKO_00628 NONE
   CKO_00629  604003 ..  604027 + -11.4  -5.22006   AGGTAAAATAAAAAA          GCCCCGACAT TCATC ATGCCGGGGC          TTTTTGTTGTACTGA 100 125
   CKO_00633 NONE
   CKO_00635  610678 ..  610694 +  -2.9  -3.37796   TTCTGGCGCGCGGCT              TCGGC CAGTACC GCCGG              TTGTAACTGATCGGC  47 153
        folE NONE
   CKO_00639 NONE
   CKO_00640  614982 ..  614995 +  -2.3  -4.86001   ACTTCATTAACGTTC               TGCCC TGCC GAGCA                TTTTTCTCAAGTACT  67 249
   CKO_00641  616056 ..  616076 + -15.5   -4.1552   TATATCGTTTTCTTT            GGGCGCAAT AAC ATTGCGCCC            TTTATTAACGCACTC 100 45
   CKO_00642 NONE
        mglC  618678 ..  618703 + -15.5  -5.72622   TACCGGCATGAAAAA         GCCCGAAGCAG GCAA CTGTTTCGGGC          TTTTTTGTTTCTGCG 100 42
   CKO_00650  624476 ..  624488 +  -3.3  -2.89881   CGTCGTGAACGAATA                AGGAG AAC CTCCA                TGTCTGAAGTGAATC  44 25
   CKO_00651  625508 ..  625518 +  -2.4  -3.73068   GCCCTCGGCTTGTTC                 CGCG AAG CTCG                 TTATTAAATTGGGAG  50 8
   CKO_00652 NONE
   CKO_00653 NONE
   CKO_00654  628125 ..  628145 + -15.5  -5.42259   TTAAACCGCACCACA            GAGGCGCTA CCA TAGCGCCTC            TTTTTTTGCAGGTAA 100 47
   CKO_00655  629127 ..  629140 +  -5.9  -3.23274   GCCTTATCTGGCCGC               GTGCC TGAT GGCGC                TTCGCTTATCAGGCC  54 44
   CKO_00656  629297 ..  629314 +  -4.3   -5.0925   ATCATCTGTTTCAAT             TATAATT TTCT AATTATA              TTTTTCCTTTTCCAA  76 46
   CKO_00657  630875 ..  630922 + -15.6  -4.07568   ATGGCGCTTTAATGC AGGCCAAATAAGCCTGAAGCGC TAAG GCGCATCAGGCTTATTGCGCCG TTTTAACCACCAGCG 100 53
   CKO_00659  632342 ..  632362 +  -3.2  -2.78463   GACGATTCTCTTATG           GCGACAACG CTGT CGG-GTCGC            TATGATGCCGGAGCT  42 151
        pbpG  633644 ..  633684 +  -9.8  -4.00532   ACCAACGTTATGCTC TGCCGGATATTGC-GCGCCG CGC TGGCGCAGCAGT-TCCAGCA TTTGCTCTTTCAGCG  80 287
   CKO_00662  637814 ..  637868 +  -3.7  -3.30771   TAGGCCGGATAAGAC GCGTTAGCGTCGCCATCCGGC-ACCGG TGCGC CTGATTGCCGGATGGCG-C-TTG-CGC TTATCCGGCCTGTGA  49 66
   CKO_00663 NONE
   CKO_00664 NONE
   CKO_00665 NONE
   CKO_00666  641825 ..  641844 +    -5  -3.32844   GCGCGCATTGTGCAC            TCCTTATG TTAA CAAAAGGA             TTGTACCGTAAAGCA  54 121
   CKO_00668 NONE
   CKO_00669 NONE
   CKO_00670  645914 ..  645932 + -14.6   -5.5454   TTCTGGAATAAAAAA             GCCGGAGA ATG TCTCCGGC             TTTTTGTTTATTTCA 100 140
   CKO_00672  649276 ..  649312 + -16.1   -3.1478   CGTCAGGATGACTGC    TATTCACCGCATCAGAA ATA TATTGATGCGGTGAATA    TATTAATGAAATAAT 100 53
   CKO_00673  649825 ..  649854 +  -8.7   -5.7827   CGTGAATACGAGAAA       GTCCACATTATTT TCAT GAATGATGTGGGC        TTTTTTATTTATATT 100 46
   CKO_00674  650630 ..  650653 + -15.3  -4.10164   AACACACCCTTTTAG          TCGGCGGCG TTTTGT CGCCGCCGA           TTTCTCTGATAATAA 100 39
   CKO_00675  651363 ..  651373 +  -5.4  -3.66784   AAACGGATAGATAGC                 CCAA GGA TTGG                 TTATGTTAAAGATAA  61 27
   CKO_00677 NONE
   CKO_00678  654872 ..  654899 +  -8.5  -4.74989   TCATTTCTCTGAAAA        CGCGTCCTTTT CTGAAT GAAAGGACGTG         TTTTGTCTGTTGTTT  88 42
   CKO_00680 NONE
   CKO_00681  657224 ..  657248 +    -5  -2.67515   GATTGGCCCGGTACA          TCATTTCCAC GCGTG GTGGTAATGG          TAGTATACTGATCCC  47 4
   CKO_00682  658209 ..  658225 +    -5  -2.79098   ACCGTTGTGGCAAAT              GCCGGC ACGCA GCCGGA              TGATTGCTGGCTGAA  47 198
   CKO_00687  662563 ..  662592 + -15.1  -3.44146   TTGCCTGATGTCACG       TACCCCTCCCCAGG TTT TC-GGGGAGGGGTA       TTGGTTATCAGGACG 100 33
   CKO_00690  666201 ..  666226 +  -6.1  -3.14211   TCAGCAACCAGCGCG         CGGTATGTTCA TCGG TGACCAGACCG          TTGATCCAGCCGCCT  57 45
   CKO_00692 NONE
   CKO_00693 NONE
   CKO_00694  671524 ..  671545 + -14.4  -4.56597   TTCTTAATGATGTCG           GGCCCGGC TGCGCT GCCGGGCC            TTTTTAAGGCGGCAA 100 34
   CKO_00695  672221 ..  672233 +  -4.8  -2.91276   CCGGTTCGGGCCGCA                GGGT AAATG ACCC                GTTTGTGAGCGCAGA  49 20
   CKO_00696  672849 ..  672862 +  -3.7  -4.18161   ATCGCAACCGCGTTA               CCGGC AATC GCCAG                TTTTAAGGCTTTATC  60 487
   CKO_00710  690228 ..  690240 +  -4.8  -3.02144   GCGCGGCGGAAGTGG                GCTG CGCTC CAGC                TGTTCGAGCAGCTCA  47 413
   CKO_00713 NONE
   CKO_00715 NONE
         dcd NONE
   CKO_00717 NONE
   CKO_00718  697072 ..  697087 +  -4.6  -4.89852   ATGGCCGTTGGCGGT              CCAGGA GCCG TCCGGG               TTTTTCTGAATATCG  77 259
   CKO_00720  698733 ..  698752 +  -2.1  -2.52516   CCTGCTATTACGTTA            ACTGCAA CAATTC TTGCAGC             ATTAATGGTGGGCAA  39 113
   CKO_00721 NONE
   CKO_00723 NONE
   CKO_00724 NONE
   CKO_00725 NONE
   CKO_00726 NONE
   CKO_00727 NONE
   CKO_00728 NONE
        wcaD NONE
   CKO_00730 NONE
   CKO_00731  708031 ..  708048 +  -4.1  -3.53811   GCGCGTTGAGAAAGT             TACTCCC TAAC GGGACTA              TTTGAGGAAAATAAA  53 16
   CKO_00732 NONE
   CKO_00733 NONE
   CKO_00734 NONE
   CKO_00735 NONE
   CKO_00736  713370 ..  713385 +  -2.4  -2.52896   CGCCGATCGCTATGG              GCGGGT GTAA GCCCGG               TAAGTTGCCGGATGG  39 16
   CKO_00737  714878 ..  714904 + -10.2  -3.73068   CGAACGCGAACCCTG         CTGACGTTGCTG AAT CAGTAATGTCGG         TTCTTCCCTTACCCG  83 5
   CKO_00738 NONE
   CKO_00739  717838 ..  717876 +  -6.7   -2.6652   TCGCGCAGGATAACT  TTTGCCGGATGGCGACGT TTAC GCGTCG-TATCCGGCCTA   TGAATTGATTTTGCT  53 28
   CKO_00740 NONE
   CKO_00742 NONE
        wcaM NONE
   CKO_00744 NONE
   CKO_00745  722961 ..  723001 +  -8.5  -5.10163   TAGACAGTTATCACT CGACAATAAGC-TCGACT GTGGAA AGTTGATGCTTATTGCCG  TTTTGTTTTGCACTT 100 70
   CKO_00746  724620 ..  724632 +  -6.3  -6.28967   GGTTTTGCAGCATTC                TCTGT TTT ACAGA                TTTTTTTTGTTTCTA 100 55
   CKO_00748 NONE
   CKO_00751  726920 ..  726936 +  -3.1  -3.25719   AATATCCTTGATTAT              TTTTATT TGA AGTAAAA              TTGGTAATATCATGA  45 11
   CKO_00752  727817 ..  727829 +  -2.7   -4.2092   TCCTTCCTCAGTCCA                TCTTG GCA TAAGA                TTATTTATAGTTTTC  60 133
   CKO_00753 NONE
   CKO_00754 NONE
   CKO_00755  731338 ..  731350 +  -3.3  -4.57474   GGTGCATATTGATGT                AGCAG AAA CTGCA                TTTTATGTGCATTAA  67 29
   CKO_00756  732910 ..  732928 +   -16  -5.96219   TGATTCGCATCAAAA             GCCCGGTG ATT CACCGGGC             TTTTTTTTGTCCCTA 100 45
   CKO_00757  734306 ..  734322 + -12.3  -2.77182   TAACCTTCTGTTATT              GGGGCTA CAA TAGCCCC              TGATTGGCTATCAAA  79 38
   CKO_00758  735471 ..  735485 + -12.8   -5.0538   CCGACCTACAAAAAA               CCGGGC ATT GCCCGG               TTTTTTCGCATCAGA 100 73
   CKO_00767 NONE
   CKO_00768 NONE
   CKO_00769  744797 ..  744824 +  -9.2  -5.47218   TGCAAAAAATGACAT        TAACCGACGTTT TAAT ACGCGTCGGTTA         TTTTTTTGCATCAAA 100 112
   CKO_00771  746367 ..  746385 + -10.3  -5.60993   TTCACAGGTAAAAAA             CCGGAGA CATGT TCTCCGG             TTTTTTTATGCAAAA 100 52
        dacD  749541 ..  749582 + -20.3  -2.65815   CAATGCATTATGGAA CACCGTCGACCTGATACGCG CAG CGCC-ATCGGGTCGACGGTG TGCTATCAGTCTCAG 100 198
   CKO_00775  750112 ..  750158 +    -3  -2.88961   TGTACGCAGTACCCG GCGGATAGGCGTCGTGACG GGGCAGTTTA CGT-GCGAGTCCTGTCCGC TATGGTGATATTTTC  42 53
   CKO_00776 NONE
   CKO_00777  751870 ..  751893 +  -3.8  -4.48987   CATCTTCAGCAAATG          CTGATCGGGCC AGT GTTCCG-TCAG          TTTTCGTTGTGCGAG  66 101
   CKO_00799  770020 ..  770039 + -12.2  -4.95547   CGAACTGGTCAAAAC            GTCTCCCA CGGA TGGGAGAC             TTTTGTTATTGTCCC 100 98
   CKO_00800  771423 ..  771436 +  -8.1  -2.82516   GGGTGAGAATCCCCC               GCAGC CCCC GCTGC                TGTGATGCTGACGAC  62 384
   CKO_00802  772995 ..  773049 +  -2.1  -4.07618   AACCACTGGCTGGCG GCAGGAAGGGAGGCGCTATGACCGTG CTTG CGTGGT-GTATCGCCTGGCTTCTTGA TTTCGTTATTGGCGA  55 5
        cobD NONE
        cbiC  774607 ..  774638 +  -8.6  -2.87132   CTATTACTTGCAGGG      GGCGCGATGAGCGA TCAA TCCTTCGACGCGCC       TGTCTGGCACAACGG  62 16
        cbiD NONE
   CKO_00807 NONE
   CKO_00808 NONE
   CKO_00809 NONE
   CKO_00810 NONE
   CKO_00811 NONE
   CKO_00812  780196 ..  780212 +  -2.2  -2.71731   TTTGCGCAGCGTTTG             GCGCGCT GGCT GGC-CGC              TGCTTAAGGAGTAAG  39 2
   CKO_00813 NONE
   CKO_00814 NONE
   CKO_00815 NONE
   CKO_00816 NONE
   CKO_00817 NONE
        cbiO NONE
   CKO_00819  785741 ..  785751 +  -2.4  -2.88231   CATCATGCAGCAGCA                 CCGG GAG CCCG                 TATGATGATTCTGGT  40 10
        cobU NONE
        cobS NONE
        cobT NONE
   CKO_00823  789540 ..  789552 +  -6.2  -4.13561   CGATGGCGACCATCC                GGCC CCAGA GGCC                TATTTTTTCAGCCGC  67 401
   CKO_00825  790718 ..  790734 +  -3.6  -3.97019   AACCGAAGGGCAGCG              CTGGCT GTCTG AGCCCG              TTGTTTAAGCTTCAT  56 1
   CKO_00826  791956 ..  791969 +  -6.7  -4.63184   TTTATAATTCTTTGG               TGCTG ATAG CAGCA                TTTTTCGCATACGTT  78 135
   CKO_00831  795505 ..  795522 + -12.7  -3.86015   GATAAATGGCAGAAA             GCCCGCT AAAA AGCGGGC              TTTCTGCCAGGGATC  95 65
   CKO_00837  802473 ..  802490 + -12.7  -5.00138   GCCAAATTTAGAAAA             GCCCGCT TTTT AGCGGGC              TTTTTGCTTTCCGTC 100 200
   CKO_00841  806062 ..  806074 +  -7.7  -3.32698   TCCAGTTGTCGCAGT                TGCTG AGC CAGCA                TCTTCTGTGAAATAC  61 352
   CKO_00843 NONE
   CKO_00844  807507 ..  807525 +    -6   -2.8655   GGTTAATCGTAGCGT             CCGTTTTG ACG CAAAACAG             TCTGATGTAAGTGAA  50 99
   CKO_00846  808373 ..  808390 +  -2.6  -3.85698   CAGTGGCGGCGAACA             GCCACG GGCGGG CGTTGC              TTTCTACGCGAGGGG  52 63
   CKO_00850 NONE
   CKO_00851 NONE
   CKO_00852  816129 ..  816146 +  -6.9  -4.45083   ACAGAAAAGCAAAAA             GCCCGCT AAAA AGCGAGC              TTTTCTAAATCTGGC  77 95
   CKO_00853  816968 ..  816979 +  -5.8  -2.80994   CACACCAACTGTGCC                GTCG CCAG CGAC                 TGTAATCACATTCGA  50 174
   CKO_00854  817799 ..  817811 +  -6.3  -4.75472   CGGCGGTTCTCGTCC                TCAAG ATC CTTGA                TTTTCTTAATATCAG  78 110
   CKO_00859 NONE
   CKO_00860 NONE
   CKO_00862 NONE
   CKO_00863 NONE
   CKO_00864 NONE
   CKO_00866  835314 ..  835341 +  -3.3  -4.24963   GTTGGCTTCCGACAA        CGGCG-GACAGG CGTAA CCCGTCACGCCA        TTTTACGTACTTATC  62 10
   CKO_00867 NONE
   CKO_00868 NONE
   CKO_00869 NONE
   CKO_00870 NONE
   CKO_00871  857749 ..  857769 +  -2.5   -2.8552   CGGATATCGGTGACA            GCGCC AATAAAGGTGC GGCGC            ATTTAATGAATAAGG  40 44
   CKO_00872  859215 ..  859228 +  -2.3  -2.62396   CCCAACACTTGGATA               TGGAG GTGG CACCA                TGATGTCGGGCAATC  39 9
   CKO_00873 NONE
   CKO_00874 NONE
   CKO_00875  867641 ..  867655 +  -5.6  -2.51045   TGTTTGCCATATTCA               GGTGGT TCT GCCGCC               ATGTATTATAAATGG  49 54
   CKO_00876 NONE
   CKO_00877  869023 ..  869040 +  -9.9  -3.01924   TCTACTTAACATAAG             CACATGC GAAC GCATGTG              TATTAAGAACCAATC  70 174
   CKO_00878  869646 ..  869656 +  -3.2  -3.24017   GAAAAAAACGTCCCC                 GGTG GCA CATC                 TTCCCTTATGAAATT  45 415
   CKO_00882  873628 ..  873646 +  -8.1  -4.25658   ATATTTCGTAATACA             GCCCGCA ACCTC TGTGGGC             TTCTTTTGATAACGT  81 72
   CKO_00887  876027 ..  876041 +  -3.4  -5.00884   GCTGTTTTCCGTATA               GTCCGT ATT GCGGTC               TTTTTTACCCGCACT  76 183
   CKO_00900  885739 ..  885755 +  -4.4  -4.70169   CATAAAGCATTTCAA              GCTCAT TCCCT GTGAGC              TTTTCTTCCATATGC  74 294
   CKO_00913 NONE
   CKO_00914 NONE
   CKO_00915 NONE
   CKO_00916  918074 ..  918095 + -10.1  -2.90813   AAAGTCTATATAGAA           CCACCTCCT GTAG AGGTGGTGG            TAATTTGCCAGAGTG  69 165
   CKO_00919  920943 ..  920961 +  -7.4  -2.65264   TTCAGTATTACCAGA             GGGACAGT TTC ACTGTCGC             TAATGTAGGTGCTGG  58 109
   CKO_00921  922020 ..  922036 +  -3.1  -4.56367   TAATAGTGTGATGGC              TTTTAGA TAT TTTAAAA              TTTATTTATCGCCTG  65 167
   CKO_00923  923005 ..  923017 +  -5.5  -3.35679   GATTGTGACGGAGAT                GCGGT ACT ACTGC                TTGTGGATCAAAAAG  56 92
   CKO_00924 NONE
   CKO_00925  924385 ..  924407 +   -12  -3.25823   GAAGAATGAATCGAA           GGCACCCG CATTTGT CGGGTGCC           TTCGTATGAAAGCGA  79 32
   CKO_00931  930746 ..  930760 +  -3.6  -3.90856   TGCAGCGGCAGTTAA               TGTTAT GTT ATAACG               TTTCATTACGCAATT  56 51
   CKO_00932  931307 ..  931323 +  -2.1  -3.09327   AAACAAACCTTATGC              CCCGGAA TGC TACCGGA              TATTCAGTCCACTAA  42 119
   CKO_00933 NONE
   CKO_00934  932803 ..  932815 +  -2.7  -3.25942   GTAACACCGTATTAT                TAACG ATT TGTTA                TTAATGTAGCAAAAT  45 66
   CKO_00935  933889 ..  933899 +  -5.4  -3.52482   TAATGACGATGCATT                 TCTG AAC CAGA                 TGTTATTGTGGTCTT  55 156
   CKO_00941  940210 ..  940220 +  -2.4  -3.33696   ATGTTGCCAGCCACC                 GGAG GTT CACC                 TTGATTAAGCAAAGC  45 7
   CKO_00942 NONE
   CKO_00943  942504 ..  942522 +  -3.7  -3.29461   TTCCTGGTTCTTTCC             CGGCACG ACGAC TGCGCCG             TTCTCGCACCCATTC  47 114
   CKO_00944  943488 ..  943503 +  -7.6  -3.03159   TTAATCAACATAAAC              GGGAAT ATTG ATTCCC               TGTTGACAAAATTCC  61 15
   CKO_00945 NONE
   CKO_00946  945359 ..  945372 +  -4.5  -2.57344   AGGTGTGTGATGTCA               GGCTA TATC TGGCC                ATTATAGCCCGCGTA  44 172
   CKO_00947  946002 ..  946020 + -11.8  -2.62263   TAAAGCCAGAAAGTA             GATCTGCT ATC AGCAGATC             TACTATGAAAGGCGT  76 197
   CKO_00955 NONE
         cbl  956152 ..  956169 + -12.7  -4.05026   GATATAAAGCAAAAA             GCCCGCT AAAA AGCGGGC              TTCTTTAAATTTGGC  95 34
   CKO_00961  958608 ..  958630 +  -7.6   -5.4505   GTATAAAACGATAAT           AAAGCGGCCG CTG CTGCCGCTTA           TTTTTTATTCAGAGG  95 78
   CKO_00962 NONE
   CKO_00963 NONE
   CKO_00964 NONE
   CKO_00965  963529 ..  963546 + -11.3  -5.63857   GAAGGTTGATTTTGA             TGCCGGA ATCT TCCGGCA              TTTTTTTCCCTTTTT 100 53
   CKO_00973  973839 ..  973861 +  -2.7   -4.4078   ATTCAGGAAGCACTG          CG-CAGCC ACATCCAG GGCTGACG           TTTTAGTTGGCAAAG  62 5
   CKO_00976 NONE
   CKO_00977 NONE
   CKO_00978  976146 ..  976178 + -13.5  -3.18239   GCGTGATAATAAAAA      GCCCGCATCATGAAA TTA TTCCATTATGCGGGC      TTAGTGCAGTATCTA  83 35
   CKO_00980 NONE
   CKO_00981 NONE
   CKO_00982 NONE
   CKO_00984 NONE
   CKO_00986  982711 ..  982730 + -12.8  -4.63218   TGTCTGATAAAGGAA            CGCCCGGT TAAT GCCGGGCG             TTTTGTTACCCCAGA 100 34
   CKO_00988  984650 ..  984670 + -16.9  -5.40072   CATAAGCAAGTTTGA            TCCCGGCTC TGC GAGCCGGGA            TTTTTTTCACCCCAG 100 159
   CKO_00991  985339 ..  985368 +  -2.3   -5.1167   TATCCGTCAGCCGCA       CGACATGATAGATA ACC TGTTTATTATG-CG       TTTTTATCTTCCGTT  74 131
   CKO_01006 NONE
        fliE NONE
   CKO_01010  999605 ..  999628 +  -3.1  -4.14243   CGATTGCCTAAAAAA          TCACGCCAG GTCTTG TTGGCGTAA           TTTTCACCTAGCGTA  58 215
   CKO_01015 1004498 .. 1004513 +    -9   -5.7946   AGCCTCTTTATAAAA              CCAGTC TTCG GACTGG               TTTTTTTATTCCCGC 100 52
   CKO_01016 1008169 .. 1008180 +  -3.6  -2.57982   CGCAGTGTTTCAGTT                CTGC GCGT GCGG                 CCTTTTATGCTCTAT  43 189
   CKO_01017 NONE
   CKO_01018 1010343 .. 1010355 +  -3.3  -2.65007   CGTTGAGTTTTATTT                GCGCT AAG AGAGC                CTGTTATGTTGACTG  43 19
   CKO_01019 NONE
   CKO_01021 1012089 .. 1012101 +  -2.7  -2.64134   CTGAGGTGAAAGTGT                TATTG GGG CAGTA                TCAGTTAATTTAATG  41 0
   CKO_01022 1013345 .. 1013394 +  -7.4  -3.55548   GATTTTTAGATCCCC TGAGGGG-AAT-TGGGGGTTAT AAATAACG GTAACCCCCAAATAACCCCTCA TTTCACCCACTATTC  66 39
        fliA 1014199 .. 1014216 +  -9.1  -2.52516   TGGGTAAGTTATAAA             GGGCGAT CGTC GTCGCCC              CTTAATAGTGCCGCA  64 27
   CKO_01024 NONE
   CKO_01025 1015718 .. 1015736 +  -6.6  -5.68438   ATAATTGCAAAAAAA             GGCGCTTT AAT ACGGCGCC             TTTTTTATTTCATCC  93 46
   CKO_01026 NONE
   CKO_01027 NONE
   CKO_01028 1018242 .. 1018275 + -10.4  -3.41836   ATAAGTGTTTTTGCG     CACTCGCCTGAAAT AATCCC GTTTTGGGCGAGTG      TATTTAAATAAATAT  77 37
   CKO_01029 1019219 .. 1019245 + -15.2  -3.95022   GTGCCAGACGCAAAA         CCGGCTGAAAGT TTC ACTCTCAGCCGG         TTTCCTGTTACTGGC 100 58
   CKO_01031 NONE
        uvrC 1022455 .. 1022466 +  -4.4  -2.72463   CATAGGGGTAATTTC                TCTG ACAA CAGA                 TAGTTACCCGTCACT  45 55
   CKO_01033 NONE
   CKO_01034 1023527 .. 1023540 +  -8.1  -5.77988   AGCAGTGTCGTAAAA               CCACC TCCG GGTGG                TTTTTTTGTGTCTGT 100 392
   CKO_01039 1024343 .. 1024357 +  -8.5  -5.18371   ACTAAACACAAAAAA               GGGGC TTAAC GCCCC               TTTTGTTTTATCCCA 100 36
   CKO_01041 1026047 .. 1026075 + -14.7  -4.68645   CTGCCGCCATTGAGC        CTAAACGGTGAGG GGG CCTCACCGTTTAA        TTTTAGTTTTGGGTA 100 28
   CKO_01044 1028009 .. 1028049 +  -9.2  -4.10552   TCTCGGTTAATGTGT CATG-TAAGCCGGAT-AACG CGG CGTTTATCCGGCTTACCGCG TTTGCTTTGCTACCG  79 31
   CKO_01045 1028550 .. 1028586 +  -5.2  -3.20435   AGAACGCCATCCTGC    TGCTGATCTTTTTCCA GGTCG TGGAGAAAGTTGAGCG    TTGGTGCGTCATTCA  52 209
   CKO_01047 1029206 .. 1029219 +  -2.5  -4.63928   GATTTTACGTGATTT               TAAAT TGAT ATTTA                TTTTTGAAATGATGT  63 62
   CKO_01049 1030210 .. 1030224 +    -5   -4.1196   TCAATCCTTGGCTTT               TAAGGT AAT ACCTTG               TTTTACGGCTAAATT  64 258
   CKO_01050 NONE
        araG 1032956 .. 1032974 +  -3.1  -3.75332   AACTACATCCGGTTC            TGGCGCAC CTAA GT-CGCCG             TTTAGCTTCGGGCGT  52 67
        araH 1033952 .. 1033983 + -16.7   -3.5511   TAGTTTAGCTCCTCC      CGATAGCCAGCCG CTACCC CGGCTGGCTATTG       TCTTTCTAAATGGCG 100 61
   CKO_01053 NONE
   CKO_01054 1036329 .. 1036342 +  -2.3  -3.10597   ATACATCAACTTCAC               TGGCG CTAA CGACA                CTTTTCGCTGAGCAG  42 73
   CKO_01056 NONE
   CKO_01057 1038468 .. 1038491 + -15.4  -5.53288   TGGACAAACACTCCA          GCAGCGGTAA GTAA TTACCGCTGC           TTTTTTTGCCTTGCC 100 52
   CKO_01058 NONE
        motB NONE
   CKO_01061 1042398 .. 1042413 +  -3.2  -2.84098   CCGTGAACAACGTAT              GGCG ATCACAGC CGCC               TGATTGATTGAGAAA  42 7
   CKO_01062 NONE
   CKO_01063 1043116 .. 1043126 +  -4.6  -3.63991   TACCCCACTAACTGC                 TGCG GAA CGCG                 TTCTTCCGCGTCCTC  53 30
   CKO_01066 NONE
   CKO_01067 1048105 .. 1048124 +  -4.2  -3.03309   GCGCTATGACATCAT            CGCT-GCCC ACC GGGCAAACG            TCATTATTGTTACAG  47 55
   CKO_01068 NONE
   CKO_01069 NONE
   CKO_01070 NONE
   CKO_01071 1051078 .. 1051110 + -14.4  -2.72144   TTCTGATGCGGTAAG     GTATCCTCAGGTTGT GCCG ACAACCTGAGGA-AC      GTTTAGCGCAGATCC  86 35
   CKO_01072 1052642 .. 1052662 +  -3.1  -4.30576   TCCTCCGGCAGGCTG            CTGGTGTCG ACG CGAATCCGG            TTTTCCTGATAGGGG  62 288
        flhB NONE
        flhA NONE
   CKO_01080 1060471 .. 1060519 +  -6.9  -3.80858   CGCGCGTTGCCAGAC TCTTTGTATTTTTGCCATCTCGT CTG ATGGCGTGGCAAAAATGAAAAGG TTTCACTTCCTGTTA  66 142
   CKO_01081 NONE
   CKO_01082 1063479 .. 1063512 +  -8.7  -4.09685   CATGATTTGCCGCAT     CACCGGC-GCGGCGGT CAC GCCGTCGCTGCCGCCG     TTTTCCAGAATCAAC  80 160
   CKO_01086 NONE
   CKO_01087 NONE
   CKO_01088 NONE
   CKO_01089 1069312 .. 1069324 +  -4.8  -4.28361   ATAGCGGTCGCCTGG                CACC AGCAC GGTG                TTTTCATCGCCTTCC  66 316
        aspS NONE
        ntpA 1075104 .. 1075124 +  -3.2  -4.62302   AAGAGTTTGTAATTA           ACGTCGCCT GAGA AGGCG-CGC            TTTTTGGAGATATTA  65 15
   CKO_01097 1075873 .. 1075891 +    -6  -3.97057   CTGATGAGGTTGCGG             CTACGTTA TAA TGACGTGG             TTTAATTCCGTTCTA  63 15
        ruvC 1076453 .. 1076472 + -12.2  -5.67063   GATAATGACAAATGA            GGCTGGAT ATCT ATCCAGCC             TTTTTTTATGATACC 100 36
        ruvA NONE
        ruvB 1078175 .. 1078186 +  -7.2  -3.30243   TGCGTTAGGCCGGAT                GGCG GCTG CGCC                 TTATCCGGCCTGCCT  61 47
        znuA 1080862 .. 1080888 + -10.1  -2.64726   TTTAATAATCTGCCC         CGACCCCACCG CGTTA TGCTGGGGTCG         CTTACTGTTCTGACA  68 89
   CKO_01107 NONE
   CKO_01108 NONE
   CKO_01109 1083230 .. 1083247 + -11.3   -5.4505   CATCAAATAAAAAAA             GCCTCTC GTCA GAGAGGC              TTTTTTGTTACCCGG 100 31
   CKO_01112 NONE
   CKO_01113 1087657 .. 1087682 + -10.4  -5.80364   TTTTTGCACTTTTAA         GCCTCGCGTGG ATTCA CC-CGCGGGGC         TTTTTTTATTACACT 100 105
   CKO_01115 NONE
   CKO_01116 1090356 .. 1090383 +  -6.2  -5.40072   TTTTATAGGGTTGTA        GGCCGGATAAGCG CAG CGCC-ATCCGGCA        TTTTTTTACCCCGCG  89 80
   CKO_01118 NONE
   CKO_01119 NONE
   CKO_01120 1093271 .. 1093285 +   -10  -3.53012   GTGCGTGACTTTTGC               CACCCT TAT AGGGTG               TTTAAAGACAAAAGA  75 75
   CKO_01121 1095769 .. 1095786 +  -9.1  -3.29144   ATCTCTGGCAGCACA             CGCCGGT CGAA ACTGGCG              TTATGCGCGACATAC  65 410
   CKO_01125 1097544 .. 1097570 +  -3.7   -3.6682   AAAAGGGCAATACAC         CTTTAGCGTGA AGTAA TCATGCTGACG         TTTACCTGGGTAGCG  54 10
   CKO_01126 NONE
   CKO_01127 1098825 .. 1098853 +  -6.1  -5.37865   ATTTCCAATAAAAAA       CCGCAAG--CCTC ATGCA GAGGAACTTGCGG       TTTTTTCGTTGTTGC  89 61
   CKO_01130 NONE
   CKO_01132 1099976 .. 1100009 + -11.1  -3.26712   CTCACAAAAAGATAA     GCAAGCGCCGCATACG GAG TGTATG-GACGCTTGC     TGTATTATTAGAACT  77 308
        pphA 1103282 .. 1103297 + -10.4  -4.44608   GGGCGAAATAAATAA              CCCGTC TGGC GACGGG               TTCTTTTTGAGTCAG  93 293
   CKO_01141 1109718 .. 1109737 + -12.2   -3.1552   GTAGCAATTACTGAT            GGCGTCAT TATA ATGACGCC             TGTTCATGCCTGCGG  81 53
   CKO_01142 NONE
   CKO_01143 1112550 .. 1112571 + -13.1  -5.40072   GCAAATAGCGTCAAG           CAGGCACAA GAAA TTGTGCCTG            TTTTTTTAACAAGCG 100 33
   CKO_01144 1113642 .. 1113659 + -11.3  -6.06723   TGGCATTCTAAAAAA             GCGCATC AGAT GATGCGC              TTTTTTTTTACGCCA 100 52
   CKO_01146 1116037 .. 1116063 + -12.3  -5.46657   CTGAGCCGTTCAGAA         GCCAGCCGGTA GAAGA TACCTGCTGGC         TTTTTTATTGCCCTG 100 53
   CKO_01149 NONE
   CKO_01151 1117097 .. 1117141 +  -5.1   -4.4773   AACGACAAGCAGAGA CAGGATGCGCGTCTGCCAG CCATTCCTT CAGGCAGGC-C-CATCCTG TTTTCATTAATGTAA  70 39
   CKO_01152 1118162 .. 1118179 + -10.5  -4.87893   AACCTCAGATATAAA             GCCTCGC CAGT GCGGGGC              TTTTTAATTCAGGTT 100 75
   CKO_01154 NONE
        rrmA 1121431 .. 1121441 +  -2.4  -3.57792   AATTTAGGTTTGTGT                 AGCG TGG CGCC                 TTTACCAATCGATGC  47 506
   CKO_01162 1125459 .. 1125469 +  -6.8  -3.00017   GCCCGCCGTATGGAT                 CGTC ACC GACG                 TCATTTCACTTTGAG  57 153
   CKO_01163 1127184 .. 1127200 +  -4.3  -3.28712   AACGAAACGGCATAA              CGGGCGT CAT GTGTCCG              TTATGCCGGGCGGGC  49 69
   CKO_01169 1132835 .. 1132845 +  -4.6  -4.56597   AGAATACGTGACTTA                 CGGG TGC CCTG                 TTTTTCCAGCGCCGC  71 211
   CKO_01170 1133091 .. 1133140 +  -4.5  -3.04398   TGGCGTAAGCGACGG CGTCC-TGACA-TAATCCCTGTT CAAATC AACAGGGGGTAGTGTGACGGACG ATTTTGCAGCAGACG  47 33
   CKO_01172 1135059 .. 1135077 +  -2.5  -3.51232   TGTTACGGAGTATGG             TAAGATG CGCGC CATTTTA             TTGATTTAAGCACGA  47 43
   CKO_01173 NONE
   CKO_01174 1136497 .. 1136521 + -14.4  -2.56596   GTTTTATCAGTAAAA          GAAACAGCGG CTGGT CCGCTGTTTC          TGCATTAATACGGAC  86 47
   CKO_01177 1139660 .. 1139711 + -10.4  -2.64616   GGCGCCTTTCAGATC CGGTGTTTTCG-GGCCGTT-AGCG ATAACC TGCTCAATGGCCGCGAGAATACCG TCATGTGCCTCCCGG  66 123
   CKO_01179 1141742 .. 1141757 +    -9  -4.87786   CAGCAGCAAATAAAA              GGCAGA ATAC TCTGCC               TTTTTATCGCGTTGC  93 67
   CKO_01183 1144046 .. 1144057 +  -2.2  -3.16564   GGCAATGCGAACGCC                CTGT CGAT GCAG                 TTCCTGAAATCCACG  43 50
   CKO_01184 1144757 .. 1144783 +  -5.1  -3.06183   CGTCCTGTAATCTCT        GCTT-GCCGCCT TTTC GGGCGGCAAAAC         TTGCATCAGCGTGCC  50 31
   CKO_01185 1145747 .. 1145762 + -10.4  -3.75824   TCAGGCGAAAAAAAA              CGCTCC CGAA GGAGCG               TTCTGTTATCGACTA  83 482
   CKO_01189 1148985 .. 1148998 +  -9.5  -3.23274   GTGTGCTGTTTGTTC               GCGCC GGAT GGCGC                TTCGCTTATCCGGCC  71 84
   CKO_01190 1149410 .. 1149422 +  -4.7  -3.30771   TTTACGTCCCTTGTC                CAGCG GCG CGCGG                TTGTGAGGAATATAG  54 196
   CKO_01193 NONE
        dadX 1153524 .. 1153542 + -12.4  -2.96274   GCGTAACTTTTTTGT             GGCGCCGT AGG ATGGCGCC             TGTGCTTATCCGGCC  80 35
   CKO_01195 1155537 .. 1155548 +  -4.4  -3.21099   GGCGCCGAGCGGCAG                CGTA ACGG TACG                 TTGCTCATGACCGAA  49 163
   CKO_01198 1157155 .. 1157213 + -11.8  -2.78025   AATAATCCGCTGTAA TTCCCGCTCCACCGCC-GGGCTGACGTT GAGAA AACGAAAGCTCAGGCGG-GGAGTGGTAA TCGTCTCATTTTTAC  72 104
   CKO_01200 1158392 .. 1158420 +  -9.6  -3.55622   ATTATCAGTCGTGAA       CGTGTCAGGGGAG GCGT CTTCCC-GGCACG        TTTACGGGGATTCAA  75 136
   CKO_01202 1160676 .. 1160708 + -15.7   -4.4078   TACAGCTTCTGATAG     C-AACCCGGCCTGC AATTGC GCAGGCCGGGTTCG      TTTTCATTCGGCGGA 100 29
   CKO_01215 NONE
   CKO_01216 1174975 .. 1174985 +  -6.8  -3.60296   GGGCCGATAACCGGC                 CCTC TCA GAGG                 TTTACCATGAAAGTA  63 59
   CKO_01218 NONE
   CKO_01219 NONE
   CKO_01220 NONE
   CKO_01221 NONE
   CKO_01222 1180743 .. 1180753 +  -5.4  -3.52656   ATGAGATCGTTCCAG                 GAGA GGC TCTC                 ATTTTCTATTTTGAA  55 415
   CKO_01224 1181547 .. 1181563 +  -4.3  -3.96188   GGTACGGATTTATAA              GAAGGCG TAC CGCTCTC              TTTATCAATATAATT  60 94
   CKO_01227 NONE
   CKO_01228 NONE
   CKO_01229 1186949 .. 1186977 + -16.1  -2.58731   GTCTTACTTCCTGTC        TCAGGCCACATCA GCG TGATGTGGCCTGC        CTGTTCGTTGTCTCC  90 44
        moaA 1188038 .. 1188051 +  -5.9  -3.03441   GATCGGGCTGATGTG               GCTCC GGCA GGGGC                TGTTGCCCGGTCATC  52 73
   CKO_01234 1190333 .. 1190358 + -11.2  -3.72051   TTGTATAATTGCTCA         GGGCGGGA-CA GGGGA TGCTCCCGCCC         TTTGCGCTTATTCAA  86 33
   CKO_01237 1193484 .. 1193505 +  -4.3  -3.13403   TGTTGTGCCAGGAGG           GGACGTTGC TAAT GCAACGGCG            TATTAATCAGCGGAG  49 115
   CKO_01238 1194230 .. 1194255 +  -6.3  -2.81584   GTGCGCCAGTCAAAG         TTGATCATTCA GGTG TGAATGATAAA          GTTGTTAACTCCTCT  54 162
   CKO_01239 1195018 .. 1195045 +  -3.5  -4.39002   CGGAAGTTTAATTGT        TCTGACCAGC TCTCAAATC GC-GGTCAGA        TTTTGTCGACCGTTT  65 216
   CKO_01240 1195852 .. 1195871 + -12.2  -3.50447   ACAGTAATACCAGAA            GCCCACAT TCGC ATGTGGGC             TTCTGTAAACATTGG  88 34
   CKO_01242 1196777 .. 1196801 + -20.1  -4.42062   GCGGGATAAGCGCAT          CAGGGATGCCG TGA CGGCATCCCTG          TTTATTTAAAGGATC 100 150
   CKO_01250 NONE
   CKO_01251 NONE
   CKO_01252 NONE
   CKO_01253 1225727 .. 1225744 + -11.3  -5.31855   GCGTTATGAAAAAAA             TCCACGC TTTG GCGTGGA              TTTTTGTTATTCGTG 100 96
   CKO_01256 NONE
   CKO_01257 1228402 .. 1228419 + -11.3  -4.56887   GCTTTAAATAAAAAA             TCCACGC AATT GCGTGGA              TTTTATGGGTTTTTG  95 212
   CKO_01260 1230840 .. 1230865 + -13.4  -2.80017   ATCGCGTCGGTTTAA         GACCAGTCAG CTTGGA CTGACTGGTC          ATTGTCTTAACCATT  82 44
        hemA NONE
        prfA NONE
   CKO_01276 NONE
   CKO_01277 NONE
   CKO_01278 1247242 .. 1247255 +  -5.3  -2.63723   TACCATTGCGCACAA               GCAAA TTGT TTTGC                ATTAATTAATCGACA  47 7
   CKO_01279 1248218 .. 1248244 + -10.1  -5.28176   AACGCGGTTTCGTAA        GCCCGGAAAGCG TAAA CGCTA-CCGGGC         TTTTTTGTCCGTCAG 100 93
   CKO_01280 NONE
        chaB 1249885 .. 1249901 +  -4.3  -3.14878   CCAGACCAGGCAAAT              GATGCGC GTT GAGCGTC              TGTTGCCTTGCAAGC  49 52
   CKO_01283 NONE
   CKO_01284 NONE
   CKO_01285 1251331 .. 1251341 +  -5.4  -4.50627   TGCGATCAAGGTGGT                 TCAC GGA GTGA                 TTTATTTCCTGAATG  70 278
   CKO_01289 1254961 .. 1254992 + -16.6   -6.3578   GCGTTTGGGATAAAG      GCGTCCTGCAATGC TTCG GCATTGCCGGGCGC       TTTTTTTTTTGCAAT 100 209
   CKO_01290 NONE
   CKO_01291 NONE
   CKO_01292 NONE
   CKO_01293 NONE
   CKO_01294 NONE
   CKO_01295 1266342 .. 1266363 +  -6.5  -2.71791   GCGTCAGTTGGGTCA           CGTCGCGGTC AGA GGTCGCG-CG           GTTTGCCCGCAGGCT  52 220
   CKO_01298 1269045 .. 1269090 + -10.3  -4.61868   GCGTGGTCATCGTGT TGCCAGCCGCAACCTGTGGAT TTCC GTCCCCTGTTTGCTGCTGGCG TTTTGTGTATGGATG  93 221
   CKO_01299 NONE
   CKO_01300 1270647 .. 1270661 +  -5.6  -3.17075   CGTTATCAATTCTGA               CGCCCT TTC AGAGCG               TTACCTTCACAGCCA  54 109
   CKO_01301 NONE
   CKO_01302 NONE
   CKO_01303 NONE
   CKO_01304 1277387 .. 1277397 +  -4.6  -4.04206   TCGTGCGCGCCCGTC                 GCTG ATA CGGC                 TTTGTGTGCGGCTAA  61 21
   CKO_01305 NONE
   CKO_01306 1277854 .. 1277870 + -12.3    -2.981   CCTCGCCCTTCGGGT              CGTTGCC TTC GGCAACG              CTTTCTCGCTTCCGC  80 152
   CKO_01312 1280695 .. 1280719 +  -4.3    -4.386   CGAACTTTTGCCTTT          GGTGCGT ACCGACGTTTA ACGCACC          TTTTATACACACTTA  67 7
   CKO_01313 NONE
   CKO_01314 NONE
   CKO_01315 1283658 .. 1283684 +  -2.3  -4.30034   TGGCAACGAGGTTAC         TCCTGGCAT AACGTTAAA ATTCCAGGA         TTTTAGTCACATTTT  58 311
   CKO_01317 1284745 .. 1284762 + -14.1  -4.61231   ATCAGGCAAAAAAAA             GCCCCCG AAAA CGGGGGC              TTTTTCAGAATGTCG 100 143
   CKO_01319 1288611 .. 1288630 + -10.7  -4.73092   TCCTGACCGATAAAA            CGGAGCC GCTTCA GGCTCCG             TTTCTTTTCCATTAT  93 44
   CKO_01320 1291004 .. 1291031 + -10.7  -3.43405   GCATTAATGGCAAAG        C-GTGGGGCAAA CGTGT TTTGCCCCACAG        TGTCTTATTTTCATC  77 34
        oppB 1292014 .. 1292028 +  -2.8  -3.41961   ATGTGCTGTACGCCG               TTATCG ACC CGAAAA               TTCGTTACTGATACT  47 0
   CKO_01322 NONE
        oppD NONE
   CKO_01324 1294995 .. 1295015 + -15.5  -5.78622   CCGCTATAAATTTAA            GGGCTGACA TGA TGTCAGCCC            TTTTTTTTGGCATCA 100 32
   CKO_01327 1297354 .. 1297394 +  -5.2  -3.25942   GCGATTCGAATTGTG  CAATCACGGTTGAGCCGG TAAAC CCGGCGGCACCGGGATCG  TTGCTGTCAACGGCT  52 186
   CKO_01329 1298505 .. 1298534 + -16.5  -2.79098   CCCTTAAATCGTAGA       GCGGATAAGGCGG CGCA CCGCCTTATCCGG        TAATTCATGCCTGAA 100 49
   CKO_01333 1301436 .. 1301456 + -16.9  -5.16133   TGACCCATCTAAAAA            GCGGGCTGT CAT ACAGCCCGC            TTTTTATATTCTGCT 100 48
   CKO_01334 NONE
   CKO_01335 1303366 .. 1303393 + -10.6  -3.08798   GGGAATGACAGGATT        GGCCCGAT-AAGC ATG GCATCATCGGGCC        TGTTGCCTGCGCAAT  73 33
   CKO_01341 NONE
   CKO_01342 1311745 .. 1311762 +  -9.1  -3.49851   TACGCGGCCTTAAAA             TGGCGCT GTAA AGCGCCG              TTGATTCTCCTGTTC  72 59
   CKO_01343 1312691 .. 1312727 +  -7.2   -4.2349   AACAACGGTTGATGC   TGAATGCCCGGT-GGCG CTTA CGCTTACCGGGCCTACG    TTTTGCCTGTAGGCC  74 29
   CKO_01347 NONE
   CKO_01348 NONE
   CKO_01349 1315991 .. 1316002 +  -4.4  -3.93369   TGACGCTTTCGTCAA                TCTG GCAA CAGA                 TTTGCTTGACATTCG  58 446
   CKO_01351 1318845 .. 1318862 + -10.5   -5.4505   GAATTTCACTTAAGA             GGGTCGC GCAA GCGGCCC              TTTTTTATTCCGGGC 100 54
        cysB 1320011 .. 1320058 + -11.7   -2.7204   AAAGTAATCACGCGC GTGAGTT-TTCAGGTATCTCC AGACATGA GGAGATACCTGAATAAC-CAC TAAATTTATGGATTA  76 34
   CKO_01353 1320190 .. 1320201 +    -3  -4.24342   AATATTTATTTCCGG                TCAA AAGA TTGA                 TTTATTCATGGGAAA  60 14
   CKO_01354 NONE
   CKO_01355 NONE
   CKO_01356 1320668 .. 1320695 +  -2.7   -3.5891   TTTAATCATCATTTC        CAGTACAGG TCATTAACAT CCCGTACTG         TATTTCCTTATACAC  49 162
   CKO_01357 1321020 .. 1321036 +    -8  -3.61398   AACCCTGAGGAGAGT              CAGGGT ATCCA ACCCTG              TTATTAAGGAGGAGC  66 2
   CKO_01358 1323740 .. 1323767 + -11.4  -3.72695   TTAAGACATAAAAAA        GGCCTGAT-AGCG CGG TGCTCATCAGGCC        TTTAATAGCAAAAAT  86 37
   CKO_01359 1324458 .. 1324471 +  -3.8  -2.75577   GCGGACTTCACCTAA               TCGC TGCCGT GCGA                TCGCTTTTGGAATGG  43 26
   CKO_01361 1325381 .. 1325406 +  -6.2  -2.90813   GGACAGAACGCTTTT         CCGTT-TCGCG CGCGT CGCGAAAATGG         TAATTTAAAGGGCTG  54 81
   CKO_01362 1325759 .. 1325770 +  -5.8   -3.2963   ACGTTGCGGTATCTG                CCGA TTCG TCGG                 TTGTGAAGGAATAAT  54 0
   CKO_01364 1327040 .. 1327050 +  -4.6  -2.78935   ATCCGGGCAATATCG                 CCTC GCA GGGG                 TATAATCGCGCCTGT  46 105
   CKO_01365 NONE
   CKO_01366 1328222 .. 1328245 + -11.8  -3.86311   CGGCTAATGAAAAAA          GCCACGATAG TTAT TTATCGTGGC           TTTAAATTTCACTGT  95 34
   CKO_01369 1330113 .. 1330130 +  -6.3  -3.81146   GCAAACAGGAACCCC             TGGCGCTC GTT GA-CGCCA             TTCTTGGTTAAAAAC  63 161
   CKO_01373 1335848 .. 1335867 +  -2.8  -4.09511   GCGAATCGGCGTAAC            CGCT-TCGC AAT GCGACAGCA            TTTTACGGAAATCTT  58 184
   CKO_01384 1344608 .. 1344620 +  -9.1  -2.90615   TTTTGATTAAATTTC                GCCTG TTG CAGGC                TGATTTGCAGAAAGT  62 287
   CKO_01387 1346387 .. 1346400 +  -2.3  -3.03798   CATCACCTGTAAGGA               GCACT CATG AGCGC                GTTATTTCTGGCCAT  42 74
        pspB NONE
   CKO_01389 NONE
   CKO_01390 NONE
   CKO_01391 NONE
   CKO_01392 1349886 .. 1349924 +    -3  -4.21908   AAAATTGATCGCTGG  AAGGGCGCT-GACCGTA TAACTT TACGGCCCGGCGCCCAA   TTTTCCGTCATGCTG  60 33
   CKO_01393 1351585 .. 1351610 + -11.9  -5.71712   TAATGAATAGAAGAA         CACCCGACAGT TATT GCTGTTGGGTG          TTTTTTTATATCAGA 100 42
   CKO_01394 1353014 .. 1353028 +  -4.2  -2.72661   AACAGAACCAGTCAT               TGCGGA GAA TGCGCA               TGCTTGAGCGTAATA  45 4
   CKO_01395 NONE
   CKO_01396 NONE
   CKO_01397 1356640 .. 1356650 +  -3.2   -4.2828   CCAACTGGCTGAAAA                 TGAC GTT GTCG                 TTTTCATCAATGACC  62 150
   CKO_01398 NONE
   CKO_01400 1358452 .. 1358464 +  -3.3  -3.66178   CGGTGTATCAGTTGA                CACAG CGC CTGGG                TTTCGGGTTCAGACC  51 304
   CKO_01402 1360745 .. 1360762 + -12.7  -5.37593   GGCAGTGAGCGAAAA             GACGCGG TATT CCGCGTC              TTTTTTAATTTGCGG 100 46
   CKO_01404 1362636 .. 1362646 +  -8.2   -2.8294   CCAGCAAATGCTGAC                 CGCG AAT CGCG                 TCGTTGTAAACGCTC  57 366
   CKO_01412 1366824 .. 1366856 +  -5.6  -4.15044   CGCAGCCGTTAAGGG     TGTTCACAGGCTACT TACG GGCAGCCTGTG-ACG      TTTATTACGCCGCCA  66 29
   CKO_01414 1368494 .. 1368512 + -13.8  -2.84602   TCGCACAACACATTT             GCGCCGGT GAT GCCGGCGC             CTTTCCTGCCATACC  84 208
        zntB 1369804 .. 1369823 +  -9.3  -5.81412   ATTGATTCGTACGAC            GCCGACT TAGATT AGTCGGC             TTTTTTTTGCCTGCG 100 215
   CKO_01417 1371481 .. 1371524 +    -9  -2.64144   ATTGAAATAAATGCC CGT-TCCGGCCTACAGGTGC TTATGC GCATC-GTAGGCCGGATAAG ATGTTTACGTCGCCA  64 31
   CKO_01426 NONE
   CKO_01427 NONE
   CKO_01431 NONE
   CKO_01433 NONE
   CKO_01434 1384232 .. 1384243 +  -4.4  -2.62192   GTTTTCCGTAATAAA                TCAG GAGA CTGA                 GTTAATTCAGTACAA  45 112
   CKO_01435 NONE
   CKO_01436 1387288 .. 1387298 +  -5.4  -4.32177   GAAAGTTTATTGAAG                 TCAC GCA GTGA                 TTTGTTCTGAGGTCA  69 5
   CKO_01437 1387650 .. 1387666 +  -7.3  -4.95843   AGTAACTGGCAACAG              TGCGTAG CTT CTACGTA              TTTTCTGTTTTGTAT  85 36
   CKO_01438 1389064 .. 1389082 +  -6.7  -3.01924   CGCGATCAGCTCGTC            GGACAGCG CCAG CGC-GTCC             TGTTGACGCGGAGTC  54 463
   CKO_01440 1393404 .. 1393454 + -13.3  -2.78438   CAGCCTGTAGCTCCA TGCTCAGCTCAGGCAGGAGATACC TTCG GGTATCTCCTG-CGGGGCGGCGCG CTTTAGCCTGTCATA  82 31
   CKO_01442 1395117 .. 1395139 +  -5.7  -4.62069   GCGCTTTGTAGAGAT          CAATCTG-TG CCAG CAGCAGATTG           TTTTTCACCTGCACC  75 66
   CKO_01446 1400442 .. 1400464 +  -2.1   -4.5774   GCCCCTGAGAACATG           TGATTGTTA TTACT TAACAATGA           TTTTACTTGTTAATA  63 168
   CKO_01448 1401933 .. 1401987 +  -7.1  -2.84051   CGCAGGTGGTCTATT TGCAGTCCTGATGTAGCAGGCCGGGG TTTT CCCCGGCCTGCTA-ATGGCGGTCACA CTTTGGTCGCAATCC  56 15
   CKO_01452 1404777 .. 1404793 + -11.5  -4.64861   TGACTCTTCTCACCA              CCCCGCG TAA TGCGGGG              TTTCTTTTAGAAAAC  95 38
   CKO_01454 NONE
   CKO_01455 1406400 .. 1406424 + -11.4  -3.84284   TGATAACTGATTCAC          ATGCCAGCGG GTCTG CCGCTGGCAC          TTTCCTGAATTTTCA  87 31
   CKO_01456 1408263 .. 1408297 + -15.9  -4.41348   TTTAAGTCTTAATAT    TGCCGGGTAACGACGC TAAC GCGTC-TTATCCGGCA     TTTATTTGAGGGCGC 100 36
   CKO_01458 NONE
   CKO_01459 NONE
   CKO_01460 NONE
   CKO_01461 NONE
        mdoD 1415410 .. 1415433 + -13.9  -4.37092   CCGCTCTGTTGCCCC          GAGCCGCCA CACTGC TGGCGGCTC           TTTTCTCCCGACGAT 100 42
   CKO_01463 1415836 .. 1415861 + -10.5  -3.54181   TTGTCCTGCTTAAAA         GGGCTTCCT GACAGACA AGGAAGCCC          TTCCTGTTTTCAGGT  79 65
   CKO_01464 1416569 .. 1416587 +  -6.7  -2.91873   TCGCCATCAAAGGTT             TCGATCG TCGCC CGATCGG             TGATTTCCACATGAT  53 111
   CKO_01466 NONE
   CKO_01467 1419175 .. 1419213 +  -7.4  -3.23449   CATAACGCAATTTTA  CGATAGCGTTGCAGGCC TGATAC GGCCTGCAACTC-GCCG   TGTTGAATTTGTGCT  62 36
   CKO_01468 1419990 .. 1420011 + -15.9  -5.60993   TAAAAAATAAGTTCA           CGCGCCATC TTCG GATGGCGCG            TTTTTTTATGCCGCC 100 31
   CKO_01470 NONE
   CKO_01472 NONE
   CKO_01473 1425813 .. 1425849 + -15.2  -2.66733   AAAAACTAAGTCAGC   GGC-TGGCCGGG-AACGC TGA GCGTCACCCGGCCACGCC   TGATGTACCTTAAAC  90 32
   CKO_01474 NONE
   CKO_01475 NONE
   CKO_01476 NONE
   CKO_01477 1428398 .. 1428424 +  -3.1  -4.07687   TTAGGAAAGGACATA        TATTTA-CGGCA AGGC TGCCGCTCAATA         TTTTGCGACAGGAGT  58 295
   CKO_01478 NONE
   CKO_01480 1430155 .. 1430167 +  -4.8  -4.28994   CATGGTGAATGGTGC                CGCT ATTTC AGCG                TTTTGCTGAATAGTA  67 54
   CKO_01481 1430470 .. 1430521 +  -4.2    -5.252   GGCGAGCGCCTTATC CGGCTTACGATGTTGCGTAGCGCC ATCA GGCATTGAGCAGCGCCATCAGCCG TTTTTTGTCGGCGTC  85 65
   CKO_01486 NONE
   CKO_01487 NONE
   CKO_01488 1439739 .. 1439753 +  -3.5  -3.73775   GCATTTGGGCGGTAA               TGCTG AACCC CAGCG               TTTCGTGCAGATGCA  53 498
   CKO_01491 NONE
   CKO_01492 1441877 .. 1441897 + -12.6  -5.91981   CATGACATTAAAAAA            TAGCGGGG CGATT CCCCGCTA            TTTTTTTTAGCTTTT 100 53
   CKO_01494 1445410 .. 1445427 + -12.7   -4.7497   AGCATTAAGTAAAAA             GGAGGGG CAAG CCCCTCC              TTTTTACTGCGTAAC 100 59
   CKO_01496 1448085 .. 1448097 +  -3.3   -5.1523   GGTGAGGGATCGCCG                CCGCT TCC AGCGC                TTTTTGTATTCTCGC  79 216
   CKO_01499 1451139 .. 1451150 +  -7.2  -2.70932   GCCGTGGATGAGCTG                GCGC GCAC GCGC                 TGATTAAACAGACGC  55 434
   CKO_01506 1461478 .. 1461488 +  -6.8  -3.72989   CGTCAACCGCCAGAA                 CGCA GGT TGCG                 TTTCGGTATAGATTT  62 111
   CKO_01509 NONE
   CKO_01510 NONE
   CKO_01511 1464948 .. 1464966 +  -5.2  -2.85078   GTCAGCCGTGGCGCA             TTGTGTCC GAA GGGCGCAG             GTTTGCTGGACTATG  49 371
   CKO_01514 NONE
   CKO_01515 1469293 .. 1469310 + -11.3  -5.75342   TTTCAAAAGACAAAA             GCGCTAC GTCT GTAGCGC              TTTTTTTTGCCAACA 100 46
   CKO_01519 1472167 .. 1472187 +  -3.2  -4.56597   GTCGCTCTCCGATCC           CCGC-GTCA ATAA TGCCTGCGG            TTTTTCACAGCCACG  67 168
   CKO_01528 1481738 .. 1481768 +   -17  -3.52102   TTTTCTCTCTCCCTC       ACAGAACGTCTGCA AAT TGCAGACGTTCTGC       TTGTGTCAGTCAGAT 100 41
   CKO_01530 NONE
   CKO_01531 1484001 .. 1484011 +  -2.4  -4.59773   CGCCAAATTCAACAT                 CCGG TTT CAGG                 TTTTTGACCGTGCGG  65 524
   CKO_01533 NONE
   CKO_01534 1488151 .. 1488162 +  -4.4  -3.53012   AGAGCGTTAACCTTT                TCTG AAGG CAGA                 TTTACCGGCGAAAAC  53 31
   CKO_01537 1491192 .. 1491210 +  -8.8   -4.7497   GGTCCCATCGGCTTA             TCCGGTCA CAG TGGCCGGG             TTTTTAATGCGTGCG  93 52
   CKO_01539 1492997 .. 1493011 +  -4.3  -3.05715   CCTGAAGTGTAATAC               TGAGT TATCC ACTCA               TTCCGTCCAAAACTT  47 29
   CKO_01540 1493819 .. 1493832 +  -4.5  -3.01791   TCAGGATTGCATCCA               GGTCG GTCG TGACC                TGTTCGACCAGACCT  47 238
   CKO_01546 1500762 .. 1500780 +    -6  -2.74144   AATCCGTCCTCGCAG             CCATAGCA TTA TCCTATGG             GTTTGGGGCTACGCC  49 20
   CKO_01547 1501797 .. 1501830 +  -9.6  -4.28115   AAACTCCCCTGAATA     CGGTGTCCGGG-ATG ATTTC CATACCCGGACGCCA     TTTCGTTTGTTTCAT  87 29
   CKO_01548 1503185 .. 1503210 + -12.6  -3.92804   TGACTTTTTTATAAA         GGGCCAGAGC AGGTAA GTTCTGGCCC          TTTACTCGTTTCTTA  95 59
   CKO_01551 NONE
   CKO_01552 NONE
   CKO_01553 1505821 .. 1505838 + -14.1  -5.63504   CTGTAATTCGTTTTT             GCCCCGC CACT GCGGGGC              TTTTTTTATCCCCTT 100 35
   CKO_01556 NONE
   CKO_01557 1508487 .. 1508497 +  -3.2  -3.34398   GATCGCCCCCTCGCC                 GGTG CTT CATC                 TCTTTAAGCACCGGG  47 386
   CKO_01564 1516038 .. 1516055 +  -5.5  -3.78775   TCACAAACTCCTCCC             CGCCATA GCGG TAAGGCG              TTTCATCGTAGCGCG  61 332
   CKO_01566 1518333 .. 1518347 +  -4.2  -3.31322   GACAAGATGGCATCA               CGGAAA CGC TGTCCG               TTCTCACGCGTTAAC  51 259
   CKO_01569 NONE
   CKO_01570 1521945 .. 1521959 +  -8.5  -3.34962   ACAAACAAGCCGGAT               GGCGG CGTAA CCGCC               TTATCCGGTCTACAA  67 49
   CKO_01577 NONE
   CKO_01578 1528876 .. 1528888 +  -6.2  -2.87132   CCTACCGCACAGTAA                GCCG CTACC CGGC                TGTGTCAGACGCAGC  54 26
   CKO_01580 1530034 .. 1530053 +  -9.3   -3.2218   CTCAGTAACAGATAA            GAGCCTG ATATAC CAGGCTC             TTACTCCCTCTTAGA  68 33
   CKO_01581 1532632 .. 1532667 +   -12  -3.03243   AGAAAGTGTAACCCC    CATCTCCTGAAACG ATTACAGG CGTTTCGGGGGATG     TGTTCGCACGTCCAT  78 30
   CKO_01582 NONE
   CKO_01583 NONE
   CKO_01584 1536700 .. 1536717 + -12.7  -2.75536   CAGGTTAACTTACGT             GTGCGGG GAAA CCCGCAC              CTTTCAGGATGGTTT  78 33
   CKO_01585 1537359 .. 1537376 + -12.7  -3.96148   GCTAACGCTTTTTCA             GGCAGGG TACG CCCTGCC              TTTATCGTCAAAAAC  95 36
   CKO_01586 NONE
   CKO_01587 NONE
   CKO_01588 NONE
   CKO_01589 1541189 .. 1541199 +  -6.8  -4.18018   GGCAGTTCCCCCTGC                 GCAC GCA GTGC                 TTTTGCGTCCCGCGC  71 115
   CKO_01590 1542941 .. 1542960 +  -2.8  -3.93782   GGTGTAATTGATCGG            GCAGCTATG CGC CAC-GCTGC            TTTCGTCTTCGCTCA  56 413
   CKO_01596 1546959 .. 1546985 + -18.8  -3.57144   CACGTTTGATAAAGA         GAATGCCCGGGT CGA GCCCGGGCATTC         TTTACAGCTCAACCA 100 32
   CKO_01600 1549709 .. 1549721 +  -6.9  -3.05384   TAGTGATTTCACCGG                CCCCG CAG TGGGG                TTGAATAAAAAACCA  57 142
   CKO_01601 NONE
   CKO_01602 1550203 .. 1550213 +  -2.4  -2.92522   TACTCCCACTTTCCT                 GCCG TCA CGTC                 TATAGTATTCACTGA  40 58
   CKO_01604 1551471 .. 1551484 +  -3.7  -2.87319   ACTGCGGCATGCGTC               GCCTC CTTC GCGGC                ATTTACTGGCTTGCG  44 406
        tqsA 1553289 .. 1553306 + -12.7   -4.4715   CTTCAGATGCAAAAA             CGGCCTC CTGA GAGGCCG              TTTTATGACTTGCGC 100 44
   CKO_01613 1557731 .. 1557781 +  -7.4   -2.5294   ACCTGTATAAGTAAA GTACGCTCCCGCCATCCGGTGTTG TCA TAACGCCTGATGGCGAGACCAGGC ATCTTATCCGGCCTA  58 27
   CKO_01614 1559394 .. 1559412 +  -5.2  -4.00042   CTACGTGGATGTTGG             TGGGGTAA TCG TCGCCCCA             TTGTTTGATGCCAAA  63 18
   CKO_01615 1560459 .. 1560474 +  -5.4  -4.37886   TCAATACCACCACCA              G-CGCAC CCA GTGCGGC              TTTTATCACGAGTCC  70 324
   CKO_01618 NONE
   CKO_01619 NONE
   CKO_01620 1563772 .. 1563814 +    -2  -5.04385   CAGTGAGATACCCCA GCGC-CAGGGCGGAGGCT TTTAAGGTC AGCC-CTTCCTTGTGCGC TTTTTTGGCGATCTC  74 102
   CKO_01622 1567088 .. 1567109 +  -2.9  -2.53134   AAGTACGACTTTTTG           CGCGCAGAGG TTA CTTCC-CGCG           GGTTTCTTGGTTTAA  40 44
   CKO_01624 1568396 .. 1568417 +   -13  -4.38116   AGGCTCACAACTTCT           CCAGGCGG TTTAAT CCGCCTGG            TTTCATTTTTATGGA 100 83
   CKO_01625 1569961 .. 1569979 + -11.7  -3.66178   GTAAGTTTCCTGTAC             GTCCCGC GCCCG GCGGGAC             TTTCCCGTTGGGCCG  93 37
   CKO_01627 NONE
   CKO_01628 NONE
   CKO_01629 1574004 .. 1574036 + -11.6  -2.74605   GCTATACGCTGACAA     TGATTGCGCAATAAA ATTA TTTATTGCGCAA-CA      TAGATTTTACGCCCG  76 29
   CKO_01630 1575106 .. 1575127 + -11.5  -2.57132   GCAGCGGTTTAAGCA           CGCAACGCC TGAT GGCGCTGCG            CTTATCAGGCCGACA  73 29
   CKO_01632 1576754 .. 1576768 +  -2.8  -3.53012   ATAGCGGCATATCGT               CAGAAA TGG TTTCGG               TTTACAGCCAGAAAA  49 63
   CKO_01633 NONE
   CKO_01634 NONE
   CKO_01635 NONE
   CKO_01636 NONE
   CKO_01637 NONE
   CKO_01638 NONE
   CKO_01639 NONE
   CKO_01640 NONE
   CKO_01641 NONE
        rnfD NONE
   CKO_01643 NONE
   CKO_01644 NONE
   CKO_01645 1584302 .. 1584317 +  -7.6  -3.23152   AAATTTCTATCTATA              CGTGAT CCAG ATCACG               TTGATAACTTCGTGT  62 199
        tppB 1586269 .. 1586290 + -14.5  -6.11644   GAAACTGATATTCAG           GCCGCTAAC GTGC GTTAGCGGC            TTTTTTTTTGCCTGA 100 49
   CKO_01647 1587027 .. 1587040 +  -9.5  -3.55444   GCCCGGTAAGCATTA               GCGCC TCCG GGCGC                TTTGCCGGATGACGG  75 97
   CKO_01653 1592542 .. 1592570 + -15.3  -4.39277   CGCGCTAATCCAACA        GACGTGTGGTCAG CCT CTGGCCACACGCC        TTTCTTCTGCTCTTA 100 33
   CKO_01655 NONE
   CKO_01656 NONE
   CKO_01657 1596370 .. 1596380 +  -8.2  -3.62096   TAACGCTCGCCACCA                 CCGC CAA GCGG                 TTTCGGCTGATCGGA  68 63
   CKO_01661 1598807 .. 1598826 +  -4.2  -5.54338   AAACGATTATCGCAA            CGCCTG CGGCTTAA CGGGCG             TTTTTATTTTCCTTA  86 12
   CKO_01662 1599990 .. 1600007 + -12.7  -2.78384   AATCCTGCGTTGGTA             GCGGCGT AAAA ACGCCGC              TATACTAGAACAACA  79 39
   CKO_01663 1600478 .. 1600506 + -15.3  -4.29738   GGGCAACTAATCTCC        CGCCGGGCACAGA CTC TCTGTGCCCGTTG        TTTTACTGCATCTCA 100 31
   CKO_01664 1601299 .. 1601314 + -10.4  -5.64421   TTCAGCAAAAAAAAA              GCGACC AGAT GGTCGC               TTTTTTATTTCGGCT 100 102
   CKO_01667 1602834 .. 1602862 + -11.1  -4.29348   ACCATTCGATAAAAC        GTTACCCTGTAGT ATG GCTACAGGGTAAG        TTCTTCTTTTGTATC  91 29
   CKO_01668 1603547 .. 1603569 + -17.8  -4.30844   GCATAAAGAGAATAA           CGCAGAAGGG AGT CCCTTCTGCG           TTTTAATGCTGCGCT 100 35
   CKO_01671 NONE
   CKO_01672 1606319 .. 1606333 +  -5.6  -3.19653   CGCCGATGGCCCATT               CCGCGA CTA TCGCCG               TTAATCCCCTTCTGC  54 7
   CKO_01673 NONE
   CKO_01675 1608782 .. 1608802 + -11.9  -2.91276   ACGTCGGATAATAGA            CTCGCGGAA TTA TTCCGTGAG            ATTTCTCACAAAGCC  77 223
   CKO_01676 1610033 .. 1610049 + -15.1  -4.67011   CGCTAATCCTGATAA              CCCCCGC GCT GCGGGGG              TTTTTACGTCGGGTT 100 35
   CKO_01679 1612304 .. 1612323 + -13.6  -3.51563   GCGATAAATCAGCAA            TAGCCGCC GAAC GGCGGCTA             TTCTCTCGACATTTT  93 34
   CKO_01682 1615239 .. 1615257 + -13.1  -3.09878   TAGCGTAATGGCTAA             GGGCGGC TTCCC GCCGCCC             TCTTCACTCACTGCC  82 61
   CKO_01684 1617377 .. 1617389 +  -6.9  -3.68351   CTATTGGCAGGGATG                GCGGG ATT TCCGC                TTTCCCTGCTGGCAA  66 42
   CKO_01685 NONE
   CKO_01686 NONE
   CKO_01688 1618148 .. 1618164 +  -2.9  -3.33744   GACAAACCCAATCAT              GTCGC GAATGCA GCGGC              CTTTTTGACCGCGAC  47 1
   CKO_01690 NONE
   CKO_01691 NONE
   CKO_01692 NONE
   CKO_01693 1621348 .. 1621359 +  -2.2  -3.63744   ACAAACTGATGTTGT                TCGT TGAG GCGA                 TATTTTACCCCGGCG  50 56
   CKO_01700 1627959 .. 1627971 +  -3.3  -4.41512   GTGCAGAACGTCAAC                CAGCG CCA CGATG                TCTTTTTTCTTCTCG  64 240
   CKO_01706 NONE
   CKO_01707 1633650 .. 1633683 +  -4.5   -3.7456   CTTTCGCAACACAGG     TTTAGCTTCAAGGCC GTGC GCCCCTGAAGCCAGA      TTTCCATATCCTTCT  56 331
   CKO_01709 1635168 .. 1635182 +  -8.5  -5.99154   TTTTCTGAATAAAAA               GCGCC CTCGC GGCGC               TTTTTTTATTTAATC 100 60
   CKO_01710 1635692 .. 1635730 + -18.4  -2.66152   AGTAATAGTACCTGT   GTAATAAAAATGGCGCAC ATT GTGCGCCATTTTTTTTGC   CTGTGTTTTCCCTTC 100 36
   CKO_01719 1644835 .. 1644855 + -10.4  -4.73094   TAGCCAAAAAAATAA            CCCCGGCA GAGCG TGTCGGGG            TTTTCTGTTGGTGTT  93 52
   CKO_01723 1650246 .. 1650267 +  -5.8  -5.47821   GCTGTGTGTAGTCTT           TGCCCATC TCCCAC GATGGGCC            TTTTTTTAAGTGCCT  88 294
   CKO_01726 1653059 .. 1653069 +  -3.2  -2.59323   TTATAAAATAAGCAT                 CGTG ATA TACG                 CTTCTGGCAAATTTT  41 99
   CKO_01727 1654011 .. 1654033 + -14.2  -3.59979   TCATGCCGCTCTGCT           TGCGAGGTGT GAA ACGCCTCGCA           TTTGAAATCAGCAGG  93 72
   CKO_01728 1655157 .. 1655169 +  -5.5  -4.63527   AAAAACTTGCCTCAG                CGGTT GAT AGCCG                TTTTTGACATCATGC  74 6
   CKO_01729 1655824 .. 1655841 +  -9.1  -3.14134   CGATAAATTCATCAC             GCAGCGGC GAT GCCGC-GC             TCTGTTGCTCAGTCT  63 328
   CKO_01743 1667088 .. 1667103 +  -2.5  -3.61654   CGACAAACCGGCGGC              TCGGC GTTAGG GCTGA               TTTCGACTAAGTCTA  50 0
   CKO_01748 1671787 .. 1671808 + -10.1  -3.53012   TCAGTGATCGGCCAT           CCCCCTCCT TATT ACGAGGGGG            TTTCAGCAGCAAAGC  75 34
   CKO_01749 NONE
   CKO_01750 1673184 .. 1673211 + -10.6  -3.83844   ATGCACTGAACCACA        GGCCCGATAAGCG AAG CGCT-ATCGGGCA        TTCTTCATTGCTACA  84 67
   CKO_01752 1674583 .. 1674604 + -10.1  -4.25283   GCGGTTAAATAGCGA           CGGGCGGTG GCGA CATTGCCCG            TTTTGCTACGCACAT  87 33
   CKO_01753 1675466 .. 1675482 +  -2.2  -2.83634   CCCTCGCCGTCGATG             GCG-GCT GGCT GGCGCGC              TAATTCATGTCATTT  40 6
   CKO_01754 NONE
   CKO_01755 1677716 .. 1677732 +  -9.4  -5.61596   CGCGTGATGAACAAA              CCGCCT TAATC AGGCGG              TTTTTTTATGCGAAT 100 44
        nadE NONE
   CKO_01766 1685512 .. 1685533 +    -3  -3.50447   GTCATGCCAGCAGGC           GC-CCTGAT CGGCA GTCAGGAGC           TTGTCTCCCAGTTGC  49 187
   CKO_01775 1693295 .. 1693313 +  -4.4  -4.75372   TCGTTATGACGCACT             CCGCCCTG AAA CAGTGCAG             TTTTTGCTCCATCGT  73 124
   CKO_01777 NONE
   CKO_01778 NONE
   CKO_01779 NONE
   CKO_01780 NONE
   CKO_01781 NONE
   CKO_01782 NONE
   CKO_01783 1699684 .. 1699718 +  -7.1  -3.30124   CAGGCCTACGGGAAA    GCGTCGTGCCATACTG ATGC CTG-ATGGCGCTACGC     TTATCAGGCCTACAG  61 71
   CKO_01786 1701872 .. 1701884 +  -4.9   -3.0094   AACCATATCAATACA                TAAGA GGT TCTTA                TATCTATGGATCAGA  50 479
   CKO_01789 1703342 .. 1703364 +  -7.7  -5.41143   GCCTGTGCGTTATAC          GCTCGCC-TC TTCT GACGGCGGGC           TTTTTTTCGCCGCTC  95 134
   CKO_01793 1709060 .. 1709073 +  -5.9  -2.55074   CGTTCTGCCTGACCT               GCGCG AACG TGCGC                TAAATTGCCATTGCC  49 9
   CKO_01794 NONE
        ansA NONE
   CKO_01797 1711000 .. 1711022 + -11.4  -2.63089   TTCAGCGTCGCAATC           GATTTTGGCG CAA TGCCAAAATC           CTCTTTCAACTGCTG  73 153
   CKO_01800 1713072 .. 1713088 + -13.7  -5.64274   AAATTGATCCCAAAA              GGCGACC TCC GGTCGCC              TTTTTTTATGGCTAA 100 52
   CKO_01801 1714037 .. 1714050 +  -6.7  -3.30124   CTGATGCCGGATGAC               GATGC TGAC GCATC                TTATCCGGCCTGCAA  59 48
   CKO_01802 1714679 .. 1714697 +  -6.6  -2.53876   CGAGTTCGCGCAGTC             GGCGATCG TCG CTGTCGCC             TGGCTTAAAGTACAG  51 454
   CKO_01806 1717352 .. 1717367 +  -3.2  -3.53012   ACAGCATAAATGGCC              CGGAAA ATTT TATCCG               TTTACCGGGCCAACA  49 40
   CKO_01807 1718847 .. 1718875 + -13.3  -4.46233   GTCCGTCAGGTCAGT        AAAAAGCCAGAAC CCT GTTCTGGCTTTTC        TTTATTTCCCCTTAA 100 47
   CKO_01809 NONE
   CKO_01810 1722138 .. 1722149 +    -3  -3.61232   TATTTGCGCGTACAG                TAAG CAGG CTTA                 TCTTTCTCTGGCAAG  49 308
   CKO_01811 1722635 .. 1722658 +  -2.2  -4.60487   AGCCCGGCCAGATAA          CGGCCTGGCG TTTG CCCCAGCCCC           TTTTTAAACATGGTG  65 40
   CKO_01813 1724683 .. 1724708 +  -4.6  -4.84359   GCAGCAAAATAACCG         AACGGGCAGG CATTGA CCTGCCCCTG          TTTTTATCCCCGTGC  73 29
   CKO_01815 NONE
   CKO_01816 1726320 .. 1726341 +  -3.6   -3.6164   GTTAACATTACACCC           CGACAGGT TAACCC GCCTGCCG            TTGTATCTCCATGTT  53 361
   CKO_01821 1729583 .. 1729612 + -10.7  -4.25104   CGCGCTGTGCCTGTT       AGCCCGGGTTC GGGAAAAA GAACCCGGGCG        TTTTCATCAGCGAAC  90 43
   CKO_01826 1732125 .. 1732150 +  -2.5   -4.1552   GGCCTTCAGCTGGTA         CGGATAATAGG TTGG CCAGTTATCCA          TTTCTTCAAGCAATG  56 70
   CKO_01830 1737409 .. 1737428 +   -15  -3.88232   TAACCCTGGCGAAAA            CGGGAGCC AACA GGCTCCCG             TTCTTGTATCACACC 100 51
   CKO_01834 NONE
   CKO_01836 NONE
   CKO_01837 NONE
        mnmA 1743660 .. 1743673 +  -3.7  -3.05514   TATTATCGAGCAGCG               CCTGC CCCT GCCGG                TATAATTATTCTCTA  45 7
   CKO_01839 NONE
   CKO_01840 1745735 .. 1745773 +  -8.9  -3.01712   GCTGAAGTAATCCCC  CCTGCCGGATAGCGATGC TAAC GCATC-TTATCCGGCCGA   TATTCAGCGCCCCAA  67 31
   CKO_01843 NONE
   CKO_01844 NONE
   CKO_01845 1750967 .. 1750993 + -15.2   -3.6796   AAGAAAATCATGATA         GAAGGGGCCG CATAAAA CGGCCCCTTC         TTATTAAACTATATT 100 28
   CKO_01852 1761185 .. 1761205 +  -5.3  -3.57792   CTTTTCCCTGGGCGA            TGCTGGCGG CTT CAGCCAGAA            TTTGCCAGTAAATCG  55 272
   CKO_01872 1773641 .. 1773654 +  -2.5  -3.06796   TAGTATCGGCAAGTC               TAAAA AAAA TTTTA                TTAACTAAGATCAGA  42 327
   CKO_01878 1775835 .. 1775845 +  -6.8  -2.73099   CCAGTGCGCTGTAAA                 GGTC TTG GACC                 AGTTTTTATCCTCTA  52 163
   CKO_01883 1777747 .. 1777779 +    -4  -3.33315   ATACTTCATCGCCAT     CACC-CCGCAAAGCT CATA AGCTGGGCGGCGGCG      TTCTCGGCCTCTTCC  51 324
   CKO_01889 1779099 .. 1779112 +  -9.5  -3.84246   TCAGGCGTAAAAAAA               CCCGC CGAA GCGGG                TTTAATCATTAAGAG  76 217
   CKO_01894 NONE
   CKO_01895 1782237 .. 1782253 +  -4.3  -3.59262   CGACACGTGAGGCTC              CCTGCGT GTA AAGCGGG              TTTGGCGATATCCCG  52 439
   CKO_01897 1783598 .. 1783615 + -11.3  -2.79796   CTGCTCTACCGCTAC             GCGGAGA TATT TCTCCGC              TGTGGTCCGGTGCAG  74 55
   CKO_01905 1787771 .. 1787784 +  -3.1  -2.58663   GGTGATGCGGAATAA               CTC-CC CAC GGAGAG               CTTATGAGGCTGGGT  41 26
   CKO_01906 1788784 .. 1788801 +  -9.8  -5.11112   GCGGAATGAAATTAA             CCCGGC CACCGC GCCGGG              TTTTTATTGCCCTTT 100 32
   CKO_01907 1789339 .. 1789354 +  -4.6  -2.53715   CGGCACATTTCCTGA              TAGCGC AACT GCGCCA               GTTCCTCGTAATCCA  44 100
   CKO_01909 NONE
   CKO_01910 NONE
   CKO_01911 NONE
   CKO_01913 NONE
   CKO_01915 1790847 .. 1790863 +  -7.2  -2.59431   ACCTGGTAAAACCGA              GGTGCC ATTAA GGCGCC              TCCATTCTACACGAA  55 107
   CKO_01916 NONE
   CKO_01917 1794926 .. 1794942 +  -5.7  -3.50715   GGCGGGAGGGCGGCC              CCTCCCG TCA CAGGGGG              TTATATGCGCCTTAT  58 45
   CKO_01918 1795235 .. 1795263 +  -2.4  -4.56775   CTATACTGGCGCCGG        TTACCTGAGGTG AACCA TGTCACAGGTAA        TTTTTAACGAAGAGT  65 74
   CKO_01919 NONE
   CKO_01921 NONE
   CKO_01922 NONE
   CKO_01923 1799360 .. 1799372 +  -5.5  -3.05521   GTCCTTTCCGCGCGT                TGCCA GAC TGGCG                TATTGACGATCTGAT  50 425
   CKO_01925 1800280 .. 1800290 +  -6.8  -3.05816   ACGACACCATTACTG                 CTGC TTC GCAG                 TTAGCTCCGCAATAC  57 131
        potA NONE
        potB NONE
        potC NONE
        potD 1805910 .. 1805921 +  -5.8  -3.53012   TATAGATCTCATCCA                TGCC AAGC GGCA                 TTTCACCAAACCACA  57 360
   CKO_01936 1811935 .. 1811956 + -15.9  -2.67803   ATTCGCGTTAATCTT           TTCGCCCCC TCCC GGGGGCGAA            TCAATTTGCTAAAGA  90 30
   CKO_01937 1815527 .. 1815538 +  -7.2  -3.30124   ACGACGCCGGATGGC                GGCG CAAG CGCC                 TTATCCGGCCTACGG  61 46
   CKO_01941 1816779 .. 1816799 +   -14    -5.252   TCGGATAATAAAAAA            GCCCCGCT CAGAC AGCGGGGC            TTTTTTGTGGCAGTA 100 43
   CKO_01943 1818419 .. 1818442 +    -3  -4.18763   GGTGCGTGACCGTCA          CGTTGCGGCA TTCC TGACGCGGTG           TTTTGACGGTTTCTT  58 470
   CKO_01945 1819239 .. 1819259 +  -3.3  -3.53012   GCGTTGGTTCAACCA            CTAACTG GTTGATG CGGTTAG            TTTCCAACCCGCCAA  49 438
   CKO_01954 1826747 .. 1826764 + -12.7   -5.1925   CGTCACTGACGAGAA             GGGAGCC ATCT GGCTCCC              TTTTTTACGTTCTCG 100 45
   CKO_01955 1826877 .. 1826894 + -12.7  -3.44146   ACACAGCGTAAAAAA             GGCAGCC ATTT GGCTGCC              TTAGTTCTCCCCAAC  85 4
   CKO_01970 NONE
   CKO_01972 1840690 .. 1840711 +  -2.9  -3.57309   GTCGCAAACGCATAG           CGCTCTTCA ACCT TAAAGCGCG            TTTCGGAGGGTTTTC  49 328
         rne 1845273 .. 1845290 + -12.7  -5.28176   GATGTTAAAGATAAA             GCCGACC TGCG GGTCGGC              TTTTTTGTACCTGCA 100 50
        flgA NONE
   CKO_01988 NONE
   CKO_01989 NONE
   CKO_01990 1857330 .. 1857342 +  -5.5   -2.6176   CTGAGTCATGATCAG                CGTCA CAA TGGCG                ATTCTGACTGGCGTT  49 397
   CKO_01991 1858897 .. 1858907 +  -4.6  -3.85698   TGGGTTGTCTGCCAG                 CCCG GAA TGGG                 TTTATGCACCACGCC  58 323
   CKO_01997 1862461 .. 1862473 +  -4.7  -2.97667   GCCACGCGGCATGCT                GGAGC CAG GCGCC                TGATTTGATACCTGC  50 10
   CKO_01999 NONE
   CKO_02000 1863878 .. 1863893 + -11.8  -5.86061   CCGACTAACGCACCA              GGGCGC ATTT GCGCCC               TTTTTTTTCGTGCAA 100 33
   CKO_02001 NONE
   CKO_02002 NONE
   CKO_02003 NONE
        bssS 1865912 .. 1865929 + -11.3  -4.15841   ACCCCTCCACCCAAA             GGCACCT TAAA AGGTGCC              TTTATCGTTTCATAC  89 50
        solA NONE
   CKO_02007 NONE
   CKO_02008 NONE
   CKO_02010 1868970 .. 1869006 + -14.3  -3.61715   TGTAGGCCCGGTAAG    CGAAGCGCCACCGGGCG TAA TGCCGGATGGCGCTACG    TTATTCCGCCGGGTC  95 224
   CKO_02012 1871206 .. 1871230 + -13.6  -3.42346   GTTACTGATTCATCA          GGTGCAGCCG GGCGA CGGTTGCACC          TTCTCATCGCCTCTT  90 33
   CKO_02013 NONE
   CKO_02014 1872571 .. 1872591 +  -4.8  -3.84246   CGCAGAGAGACCCTC           GCGGCAAAA TGAT TTTTGC-GC            TTTCATACTTGCAAA  61 14
   CKO_02016 1873305 .. 1873323 + -10.3  -4.17425   TTCAGTATAAAAAAA             TACCGGC AGCAG GCCGGTA             TTTTCAGATAATTGT  87 292
        mdoC 1878942 .. 1878972 +  -8.3  -5.08824   ACGCCAGTCGCACCA      GAACCCGCTTCCAG AATC CTGTG-GCGGGTTC       TTTTTTCAGTACCAC  95 88
   CKO_02027 1883392 .. 1883408 +  -2.2  -4.60746   TGACTAGATTGAAAT              CAGTTG TAGTC CATCTG              TTTTAATATTTTTAC  63 463
   CKO_02029 NONE
   CKO_02030 1884622 .. 1884640 +  -3.8  -2.87243   AGTCTGGAGGCTGCC             ATGCGTGT CAA ACATGCAG             TAGTTATGCTCATGC  44 51
   CKO_02031 NONE
   CKO_02032 1885992 .. 1886011 + -11.4  -5.68438   ATTGACATCATATGA            GCGTGGGG GAAA CCTCACGC             TTTTTTATTTGCTGA 100 119
   CKO_02037 1889278 .. 1889297 +   -10  -5.79526   ATATTCAGAAAAAGA            GCTCGTAC GAAA GTACGGGC             TTTTTTTTCGCATAT 100 187
        putA 1897065 .. 1897085 +  -2.4  -4.07568   GTAGGCCGGATCAGG            CAAAGCCG CCATC CGGCAATG            TTTTAGAGCCAGAGG  55 112
   CKO_02044 1897675 .. 1897687 +  -3.4  -3.57144   CGGATCGACGGGCGC                CAGT TTTCC ACTG                TTTACCCATCCGGCA  49 199
   CKO_02047 NONE
   CKO_02048 1899744 .. 1899773 + -12.1  -3.01785   TAAAAATGCCTGACC       TTTTCTCCCCCGC CTGC GCGGGGGAGAACC        TCTGCTATTTTGCCG  78 28
   CKO_02058 1909742 .. 1909753 +  -7.2  -3.01712   CCTGGCCACTGTTTG                CGCC AGCT GGCG                 TCTTCCACCCGGGCC  57 325
   CKO_02065 NONE
   CKO_02066 NONE
   CKO_02067 1915393 .. 1915423 +  -9.6  -4.82901   ACCCATAAAATAATA       AACGGGGGTTGGCA CAC TGCCCACCCCCTTA       TTTTTATCACCGCGA 100 33
   CKO_02071 1917970 .. 1917984 + -11.4  -3.72576   CAGCCAGGCGCGGGC               CAGCGC CAC GCGCTG               TTTCATCCCGCCGGA  79 401
   CKO_02078 1922603 .. 1922651 +  -3.9  -4.15222   GCCCGTTCACATCGA CCGCGCATCCTGCC-GGGATGGCG CGCC CTTCATTCCAGGC--GATGCGCGC TTTATTGCCCGCAAT  60 498
   CKO_02081 NONE
   CKO_02082 NONE
   CKO_02083 1926144 .. 1926177 +  -3.1  -3.90744   AAGATCACGGTGAAA     CGCTGGGGGATG CAGCGTTAACC CCTCCCCC-GCG     TTCTTTGCAGCCGGA  54 5
   CKO_02086 1930702 .. 1930712 +  -6.8  -3.75598   GACGGCAAATAATGC                 CAGC CAT GCTG                 TTATTCGGTTGATTC  66 357
   CKO_02093 1937230 .. 1937259 + -15.1  -3.83026   TTTTTGACACAAAAA       CAAAGGGGCTACC TTTC GGTAACCCCTTTG        TTTAATCTGGCGGAA 100 125
   CKO_02096 1938403 .. 1938428 + -12.5  -5.15634   ATAAGAACGCATTAA         CCAGGCCCCGC TTAT GCGGGGCTTTG          TTTTTTGGTAAACTG 100 44
   CKO_02097 1939135 .. 1939152 +  -3.5  -3.90112   CCTCGCAAAACTCAG             GACAATGG CGC CCATT-TC             TTTGATTCGACAGAA  56 356
   CKO_02099 1940383 .. 1940405 +  -4.8  -3.34517   CTTGAAAAGTGGAAT           GTTACCCTCA TAT TGAGAGTATC           TATTTCCCGGGAGGT  54 41
   CKO_02100 1940778 .. 1940802 +  -7.1  -3.90744   AGCGCGACGCTTATC          GGGCTTACACG CTA TGTCTGAGCCC          TTATTTCGCCAGCCC  68 61
   CKO_02102 1942111 .. 1942133 +    -4  -2.69151   TTTTTTCGTCTTTCT           CTTGCAGCGT CAA GCGCTTCCAG           TACTCTGTAGCAAGG  45 84
        mgsA 1942964 .. 1942975 +  -7.2  -4.58395   TTGCAGCTTAGGCCA                GCGG GTCG CCGC                 TTTTTCAAGACTGGC  83 363
   CKO_02107 NONE
   CKO_02108 1947697 .. 1947716 +  -9.4   -4.3739   TTCAATCGACGTTGT            GAAAAACG GGTA CGTTTTTC             TTTTATGGCAGCATC  84 274
   CKO_02110 1948872 .. 1948882 +  -6.8  -3.85698   CGGTTTCCGCGATTT                 TCGC TGA GCGA                 TTTCTCAGCAGGAAA  68 131
   CKO_02111 1950188 .. 1950202 + -12.8  -5.58454   CCGTCTAATAAAAAA               CCCCGC GCT GCGGGG               TTTTTTTCGTCTGAA 100 45
   CKO_02113 NONE
   CKO_02114 1953326 .. 1953350 + -18.7  -5.24129   TGCCTGTAAAAAGGC          GAAACCTCCGC ACT GCGGAGGTTTC          TTTTTTCTAAAGAGA 100 123
   CKO_02115 1953888 .. 1953898 +  -4.6  -3.71378   GTCATACCCGTCCTG                 CTGC TGC GCGG                 TTTCGATGTGGAATG  55 120
   CKO_02121 1962668 .. 1962697 +  -2.8  -4.08216   CCAGCCACGACGACA      C-CGG-GCTGGGCC AGCA GGCATAGCGCCGCG       TTTTCACCCGGCTCA  58 134
   CKO_02124 1965080 .. 1965090 +  -2.4  -2.73811   CATTCATTCACCACG                 AGGC GTT GCCC                 ATGTTTAAATTTTTC  39 7
   CKO_02125 NONE
   CKO_02126 1967219 .. 1967259 +  -2.4  -2.54171   TTAAGGAGTACACCA  ATGGCAACGCCCACAAAC AAATG GTTATTGCGCGTTGCCCC  CTGGTTTTTACCGGT  39 37
        ssuC NONE
        ssuB 1968917 .. 1968929 +  -4.7  -5.14965   CTTTTCAGTTGCTCC                AGCGC GGC GCGCA                TTTTTTCCTGGCGCT  85 168
   CKO_02134 1974588 .. 1974623 +  -2.5  -3.22668   TTGTTGGCCGGATAA   CGCGCTTGC-GCCG-CT ATCC GGTCGACAGAAAGCGCG    TCTTATCGCGACTTT  43 44
        asnC 1976194 .. 1976210 + -13.7  -4.60797   TTTCTGATTTTAGAA              GGCCAGC TTT GCTGGCC              TTTTCTCTCTCAGAA 100 34
   CKO_02136 NONE
   CKO_02137 1977901 .. 1977916 +    -9  -5.76633   TAAATGCCTAAAAAA              CAGGAC TTCG GTCCTG               TTTTTTTATGTCTGC 100 58
   CKO_02139 1979271 .. 1979314 +  -8.8  -2.71712   CAGGTAGTGCCTGGC GCTTACCCGGTCTACAGTGG TTTC CCATTGCAGACCGGACAAGA ATTTACCAGACCGGC  64 53
   CKO_02148 NONE
   CKO_02149 1991254 .. 1991278 +    -7  -3.36991   GCCAGGCCCCACCAT          CGCCAGAAGC TGATC GCTGCGGGCG          TCTTTCAGCATACTG  58 248
   CKO_02158 1999778 .. 1999792 +   -10  -5.28176   GCAGAAATGAAAAAA               GCACCT TTC AGGTGC               TTTTTTCTGGATCAA 100 31
   CKO_02161 2002077 .. 2002090 +  -3.8  -4.68424   GCCAGTTTTTGGCGC               GCGT ATTGTA ACGC                TTTTTCAATCACTTG  67 200
   CKO_02166 2007581 .. 2007601 + -11.8  -6.32976   GACTGAGCTATATTA            CGGGGCGC TTTAT GCGCCCTG            TTTTTTTATTTTTTT 100 77
   CKO_02167 2008780 .. 2008801 +  -7.3  -3.30243   TTACCTGCGTGGCGA           CGATCATCA TTGC TGATGAGCG            TTATACGCAGTAAAT  61 10
   CKO_02168 2011173 .. 2011192 + -11.4  -4.58395   AAAGCGTACAATAAA            GGCTCCAC GTAA GTGGGGCC             TTTTTAACAACTAAG  95 69
        pflA 2012070 .. 2012119 +  -9.4  -3.19463   GTACTGAGTTATTTT GTCGGTATCGCCGGATGGCGACGC GAAA GCGTC-TTATCCGGCC-TACAGAC TTCATACCTGATCAC  68 34
   CKO_02170 NONE
   CKO_02172 NONE
   CKO_02173 2014438 .. 2014448 +  -5.4  -3.59979   AGCAGCGGAACCGCA                 GGTT GAT AACC                 TTTCAACTGCGGCAC  55 235
   CKO_02176 2016049 .. 2016064 +  -2.4  -4.60041   TACGCACTTTGTCGC              CGTTGC TGAT GCCGCG               TTTTTGCGCGTCCAT  65 353
   CKO_02183 NONE
   CKO_02184 2028067 .. 2028083 + -12.3  -4.85782   AACAAAAGTAAAAAA              GGCGACT ATA AGTCGCC              TTTATTTTTGCCCCG 100 56
   CKO_02185 NONE
   CKO_02186 NONE
         aat 2032573 .. 2032600 + -12.2  -4.14764   TAATGCGCCAAACCT        GATTTGCTGCGTT TTA AACGC-GCAAATC        TTTACTTATTTAAAG  95 211
        infA 2032927 .. 2032943 +  -7.2  -5.21236   GTAAAGATAAAAAAA              GGTCGG TTTAT CCGGCC              TTTTTGTTGTCCCTT 100 62
   CKO_02193 NONE
   CKO_02194 2035972 .. 2036004 +   -15  -3.37344   ATTCACAGCGCTAAT      CGTATTCCCTGCTC CCCCA GGGCAGGGAATATG      TTCATTGCGTAACCA 100 27
   CKO_02200 2040143 .. 2040175 + -13.6  -3.86346   GTGTACATCCCGCAG      TCAAAATGCCAGCC CGATC GGCTGGCATTTTTA      TTTCTGCGCCACTGC 100 56
   CKO_02204 2046170 .. 2046196 + -10.1  -5.89827   CAGTACAATAAGCAG        GCCGGGTAAGCG TTAG CGCC-ACCCGGC         TTTTTTTTGCTCCTT 100 95
   CKO_02205 NONE
   CKO_02206 NONE
   CKO_02207 2049978 .. 2050017 + -16.6  -2.71924   GCCGGATGACGCTTC  GC-TTATCCGGCCTGCC ATCTTTC GGCAGGCCGGGTAAGGC  ATTTACGCCGCCATC  95 50
   CKO_02209 NONE
   CKO_02211 NONE
   CKO_02212 NONE
   CKO_02213 NONE
   CKO_02214 2056385 .. 2056422 +  -5.4   -4.1891   ACCTCGTACTGCTGA   GCGGTCGCCGCTTCCG GCGCGG CGAAGGTTACGACCGC    TTTGTCTTCGCCAGA  65 468
   CKO_02230 NONE
   CKO_02232 NONE
   CKO_02233 NONE
   CKO_02234 2074883 .. 2074894 +  -5.8  -2.52681   TATTTTTCTGGCAAG                GTCG TCAT CGAC                 ATTAATCGGCTTTTC  49 131
   CKO_02238 2077613 .. 2077643 + -12.1  -3.94877   CATAAGCCCCACAAA      TTGTCTGGCATTCT GCAT AGAATGCC-GACAA       TTATTCTTGCCGCCT  95 65
        artP NONE
   CKO_02240 NONE
   CKO_02241 NONE
        artM 2080947 .. 2080973 +  -8.8  -5.60993   AAACGAAATCATAAA        GACGGACAAGC CACTAA GCT-GTCCGTC         TTTTTTTATAACAAC 100 138
   CKO_02243 2081834 .. 2081862 + -23.3  -3.48276   CCGCAGTAATCTTCC        TTGCCGGATGGCG CTG CGCCATCCGGCAA        TTCTATAAGGGCACA 100 32
        grxA 2093410 .. 2093428 + -12.4  -3.52449   CTGATCGCTGCTTTA             CGCCCTCT CCC GGAGGGCG             TTATCGGTTCTTTTT  88 37
   CKO_02260 2095875 .. 2095911 +  -5.2   -5.4833   CCCCAATTTGTGGAG   CCCATCAACCCCG--CCA TTT TGGTTCAAGGTTGATGGG   TTTTTTGTTGCCTGA  86 138
   CKO_02262 2096592 .. 2096606 +  -4.2  -3.70463   CGTAAAGCCTTAAGA               CGCC GGACCTG GGCG               CTTTTTATGTTCTTC  55 55
   CKO_02265 NONE
   CKO_02266 NONE
   CKO_02268 2100799 .. 2100821 + -10.6  -3.66844   AAAGAGTAGTATTAA           GCGCTCTGTA CTG TGCAGAGTGC           TTATTCAACTGTCCA  83 51
   CKO_02269 2101948 .. 2101980 +    -4  -3.78022   GCTCTTATCCCCAAA      CCAGACGCGCTG AGTCACGAA CGTCGCGTCAGG      TTTAATGGGTGTCAC  56 370
   CKO_02271 2104030 .. 2104043 +  -4.5  -4.08394   CTCGACAATTTCACC               TCTCG CTTC CGGGA                TTTTAAAGCCGCTGT  62 328
   CKO_02276 2106960 .. 2106971 +  -5.8  -3.30124   ATTGCGCCGGATGGC                GGCA TAAA TGCC                 TTATCCGGCCTACGG  56 102
   CKO_02282 NONE
   CKO_02283 2115710 .. 2115726 +  -8.7  -3.14132   CTTATCCGGCCTACG              CGTCGCT CAA AGTGACG              TTCGTCCGAACGCGC  65 195
   CKO_02286 NONE
   CKO_02287 2119865 .. 2119887 + -11.3   -5.1287   ATTTGTAGACACAAA           TCCCCGGCA TACAT TGCTGGGGA           TTTTTTGCATATGAC 100 40
   CKO_02288 NONE
   CKO_02289 NONE
   CKO_02290 2123460 .. 2123477 +  -9.1  -3.85165   AGGCAACTACAAATA             CGGCGAC TTCA GTTGCCG              TTTCACTTTCGAATG  77 58
   CKO_02292 2124388 .. 2124404 + -13.7  -3.83705   ATCTGATTCCAGATA              CCGGAGC GCT GCTCCGG              TTTCCTCCTGCTTTT 100 35
   CKO_02294 2125817 .. 2125829 +  -6.9  -3.65529   GCCCTTCCCGCTCTA                CGGCG GTG CGTCG                TTTCCCTGGACGTAT  62 51
   CKO_02296 NONE
   CKO_02297 2130888 .. 2130913 +  -6.8  -5.42259   CAAACTGTAGCGTAG         GCCCGGTAAGC ATAGC GCC-ACCGGGC         TTTTTTTAGCCGTCG  90 77
   CKO_02299 2133704 .. 2133733 +  -8.5  -2.52464   CCCGGCCTACCGCAT       CGGCCCGATAAGCG TAG CGCC-ATCGGGCCA       TCACTTCAGCAGCAA  61 76
   CKO_02302 NONE
   CKO_02303 2137618 .. 2137635 + -12.7   -4.8048   ATCAGACAAAAAAAA             TCCGCCC CGAG GGGCGGA              TTTTTCATATCACCG 100 139
   CKO_02305 2138420 .. 2138436 +  -2.9  -5.75342   CAATTCATCGATATT              TTACGGA TTC TCCGGGA              TTTTTTTTCAACGAA  86 62
   CKO_02307 2139419 .. 2139447 + -13.4  -3.46008   TAATTAACGTTACAA        TTCTGCATGATT TGCAT AATCATGCAGAA        TATTGCTTTTATCCT  86 34
   CKO_02308 NONE
   CKO_02309 2139574 .. 2139586 +  -4.9  -4.28254   AATTTAATAACATAC                TGATT TTT AATCA                TTTTCAATATTAAAC  67 54
   CKO_02310 2140246 .. 2140263 + -10.5  -4.29656   AGTAAGACCTATGAA             CCCTCGC TTCG GCGGGGG              TTTTGCACTTTTATA  90 52
        glnH 2141346 .. 2141389 + -12.5  -2.84053   TAACGCTGTATTTTA GCTCGTTACGCCCGGT-GGCG CTTG CGCTTACCGGGCGTA-CAGGC CTTTGAGTACTTTCA  79 41
        glnP 2142069 .. 2142080 +  -4.4  -2.95448   GTCGTCTGGAAAGAA                GGAT GAAA ATCC                 TGTGATTGAATTTAA  47 9
        glnQ 2142812 .. 2142837 + -19.1   -3.5393   TTTCCTGAGGCACGC         CCCTCCCTTCC GCCC GGAAGGGAGGG          TTTCCCCGGAATCCT 100 33
   CKO_02315 2145348 .. 2145358 +  -8.2  -2.64472   ACCACATCACCTGGC                 GGCC AAA GGCC                 TGGCTTTCCGCGATC  56 216
   CKO_02318 2146643 .. 2146663 +  -9.8  -4.42238   CCCCCTACCAGGTAA            CTGCATTC CCACC GAATGCAG            TTTTCCTTAGCATGG  90 41
   CKO_02319 2147077 .. 2147087 +    -4  -4.90778   ATCGAAAGATAGCCA                 GTTA CGC TAAC                 TTTTCTTTACGTAAA  73 16
   CKO_02321 2147717 .. 2147738 + -13.7  -6.11644   GTGTTACCCTTGTTC           GCCCGTCCG CCAC TGGACGGGC            TTTTTTTTTGCCTGA 100 108
   CKO_02323 2149531 .. 2149560 + -13.8  -4.73613   TATTATCCATCCGAA       GATATTAGCCCT TTCTTC AGGGCTAATATC        TTTTATTCATGCTGA 100 41
   CKO_02324 NONE
   CKO_02325 NONE
   CKO_02326 2152796 .. 2152816 +  -6.1  -3.34895   TAAAACCAGCATCAT            TAACGCTGC CGC GCAGTGTCA            TTGATTCACCATGCA  59 1
   CKO_02327 NONE
   CKO_02328 2154374 .. 2154399 + -12.6  -5.47218   CGGATGCTTTTTTTA         CGCCCGGCAA CCACTT TTGTCGGGCG          TTTTTTTACCTCCGG 100 58
   CKO_02331 NONE
   CKO_02332 2159854 .. 2159870 +  -3.6  -2.78712   TTCAGCGACGAGGCG              CGGCAT GAATG ACGCCG              TCATTACGTTAAACG  44 14
   CKO_02333 NONE
   CKO_02334 2162742 .. 2162787 +  -9.2  -3.53444   TGCCTGATGGCGCTT CG-CTTATCAGGCCTACGA CCACATATT TTGTAGGCCGGATAAGGCG TTTACGCCGCCATCC  72 47
   CKO_02335 2164295 .. 2164307 +  -4.8  -4.91109   CACGAACACGTTGTT                GCCA CCTCA TGGC                TTTTTCTCCTGAAGG  76 388
   CKO_02337 NONE
   CKO_02338 2166424 .. 2166434 +  -4.6  -2.62983   AAGCGGAAAACACGG                 GGGT GAA GCCC                 TGATGTCAACATCAC  45 12
   CKO_02339 NONE
   CKO_02346 NONE
   CKO_02347 2172405 .. 2172422 +  -6.9  -3.63515   TAGCTGATGCAACTG             GTCGCGG ATCT CTGCGGC              TTCTTCAAACTCCAG  62 34
   CKO_02349 2174915 .. 2174939 +  -3.5  -4.23434   AGCTAACGAAACGCG         GGCG-GCAGG CGAGAT CCTGCTCGCA          TTTTCACCTGTTTTA  62 35
   CKO_02354 NONE
   CKO_02355 2180895 .. 2180917 +  -5.5  -4.33417   GTCGGTAAGCTGTCC          ACGCTGTGCG GATG CGC-CAGCGC           TTTGTTCTCGCTGGC  69 438
   CKO_02361 NONE
   CKO_02362 2188462 .. 2188486 + -20.1  -5.50499   AGATAAAAGAGAAAA          GGTCGTCACGC CGG GCGTGACGACC          TTTTTTTACATCTGA 100 68
   CKO_02365 2192462 .. 2192475 +  -8.1   -3.2779   AAATGAATATCAAGG               CACCC GCCC GGGTG                TTCGATATTTATATC  65 66
   CKO_02367 2194765 .. 2194776 +  -3.6  -3.65902   GATCGACGTTAAAGC                CGCG CGGC TGCG                 TTTCGGTCGGCTGGA  53 245
   CKO_02369 2196860 .. 2196898 +  -7.4  -3.09635   GCTCTTCCAGTTTGT  TGACC-CACAGGTGCTG ATCGCC CAGCGCCAGCGCGGTCA   TTGCATAATGCGGAT  57 304
   CKO_02374 2200389 .. 2200399 +  -3.2  -2.61727   TTTAATGCTGACAGA                 GTGA TTA TCGC                 TACGTTGTGCTAAGT  41 2
   CKO_02375 2201963 .. 2201982 +   -15  -5.13521   GTTAGCGGTTCACTG            GGGGCGTG CGGC CACGCCCC             TTTTTTCACTGCTTT 100 36
   CKO_02376 NONE
   CKO_02377 NONE
   CKO_02378 NONE
        galM 2206430 .. 2206482 +  -9.3  -2.84602   TTTATTCCGGCCTGA CGATGAGCCATAACAGGCCCGATGGT GCCA GCTATCGGGCCTG---TGGCGCGTCG CTTTGCTCAAATCCC  65 26
        gpmA 2207630 .. 2207640 +  -6.8  -3.63895   GCTTCCGGCGCGCCG                 CTGG CCA CCAG                 TTTGCCCTCCTTCAG  62 252
   CKO_02387 2214474 .. 2214491 + -11.3  -5.54907   AAAGGCCAGGTAACG             GGAGAGC TGAC GCTCTCC              TTTTTATTTTGTCAG 100 49
   CKO_02388 2215512 .. 2215538 + -14.4  -3.14051   ACCACTAACTGGAAA         GCGCGTGTGAGC CTC GTTCGCGCGCGC         TGTTGATCCACATCC  90 33
   CKO_02407 2226284 .. 2226311 +  -6.2  -2.79968   CAGCGGCGCAACGCG        TGGGATGGAGTC TTTG GTCGCCATCTCA         ATTTGCGCTTCGGTC  54 356
   CKO_02411 2227931 .. 2227943 +  -3.4  -2.62613   ATCGACGACATTCTT                TTGC CGTCT GCAA                CTATTTAGCGTAGAC  43 322
   CKO_02412 2228553 .. 2228563 +  -2.4  -4.25104   GCGCATTTGTGAATC                 CGGC ACC GCCA                 TTTTGATGCCGGAAG  60 454
   CKO_02415 2233556 .. 2233595 +  -2.9  -2.53449   TAAATTTACGTTGAT  CGCGCGCAGAAAACA GCGCTGATCA TGTTTTCTGTTCACG   GTATTGTGACAATAT  40 4
   CKO_02416 NONE
   CKO_02417 NONE
   CKO_02418 NONE
   CKO_02419 NONE
   CKO_02420 NONE
   CKO_02421 2240323 .. 2240350 +  -6.4  -4.39133   TACAACAACAGCCAT        CAG-GATACAGGA TTT TGCTGTATCACTG        TTTTCCTGATTATTC  75 50
   CKO_02422 2241782 .. 2241817 +  -6.9  -2.77947   GTCCTGATACCACAG   CG-ATGCCGGAT-GGCG CTAA CGCTTATCCGGCCTACG    GTTTGCGCATTGTTG  56 34
   CKO_02424 NONE
   CKO_02425 2244143 .. 2244173 +  -6.1  -3.30124   GGCGGGGATAGACTG      GTAGCAGCGCCTTT GTCT GATGGCGCTGC-GC       TTATCAGGCCTACAG  59 22
   CKO_02430 2248536 .. 2248552 +  -5.7  -3.17723   GATACACCACGTCGT              CGCCATC AAT GGAGGCG              TTCACTTCCGGGTAG  54 482
        gltA 2257654 .. 2257677 + -11.7  -4.60258   AGCGTTAATCATCCT          GGCCATCGG GTAACA CCGGTGGCC           TTTATTATTTACTGA 100 33
   CKO_02440 NONE
   CKO_02441 NONE
   CKO_02442 NONE
   CKO_02443 NONE
   CKO_02444 2261328 .. 2261348 +  -6.8  -2.62735   CTTCGCTCGTGGCAG            ACCGTCAG TACAC CTGACGGC            TCCTGTCCCGGATAT  55 109
   CKO_02445 2262966 .. 2262990 +  -9.9  -3.65224   AGGTTCAAGCCAGAA          GTCGCTCTCGC CCA GCGGGAACGGC          TTGTTAAACTCCGCT  74 478
   CKO_02450 2268820 .. 2268833 +  -2.3  -4.43844   CCAGTAGAACGGGCG               CGAGG AGAG CGTCG                TTTTCTCAATAATGC  62 129
   CKO_02459 2276969 .. 2276989 +  -7.6   -4.3739   ACGTATAAAAAAAAA           CCGCC-ACA TTTC TGTTGGCGG            TTTTCTCGGACGATG  77 130
   CKO_02462 NONE
   CKO_02463 NONE
   CKO_02464 2281389 .. 2281407 +    -3  -3.52906   ATGAGTGGATTACGT             CCTGCATT ATC AACGCTGG             TGTTTCTGACGCTGC  49 49
   CKO_02465 NONE
   CKO_02466 NONE
   CKO_02467 2285299 .. 2285312 +  -3.9  -5.96521   TATCGTTTTATGCCA               TGAAT GGTT ATTCA                TTTTTTTTAATTAAT 100 23
   CKO_02469 NONE
        potE 2289820 .. 2289834 +  -7.8  -3.05463   ACAATGCGGCTTTCT               GCGCAG ACG TTGCGC               TTGCCTGCAAACGGT  57 390
   CKO_02473 2292734 .. 2292772 +  -9.5  -2.95884   CCAACTGATTAAAAA  C-TCAGCGTCCGCGCGCG ATTA CGTCCGCGGGCGTTGGCG   TGTCTGCCTTGCTGA  70 33
   CKO_02474 2293186 .. 2293203 +  -3.4  -3.36694   CATGTAGCACAGAGT             GCAGTC CCGCGT GATTGC              TGTTTCCGCATGCCT  49 63
   CKO_02475 NONE
   CKO_02476 2293920 .. 2293936 +  -4.3  -3.52482   ACTTTCTTGCCTGAC              CCTGTAC AAT GTCCGGG              TGTTATTCTGGTATT  53 116
         fur 2294584 .. 2294601 + -11.3  -5.64274   GAACCCTCCTAAAAA             GCCAACC GACC GGTTGGC              TTTTTTTATGCCTCC 100 44
   CKO_02483 2300898 .. 2300913 +  -3.2  -5.88565   TACGAGACCCCGATT              AGGCTT CTGG AAGCCA               TTTTTTTATTGTGCG  95 154
        nagB 2302023 .. 2302051 +  -4.6   -5.0538   GTCTGTAATGTTATC       T-CCGCCCTGT ACGCAGAC GCAGGGCGGCA        TTTTTTGAAATCGGG  76 33
        nagA NONE
   CKO_02488 2304495 .. 2304511 +  -3.7  -3.07856   AAATCCTTTGGGTAG              TTCATGA CCA TCAAGAA              TGTAATTTGTGATAT  45 69
   CKO_02489 2305458 .. 2305472 +  -5.6  -4.25104   ATCTCTTGCGAACCC               TGCGGC TTT GCGGCA               TTTTCATAAACAAGC  69 233
        asnB 2307199 .. 2307237 +  -9.1  -2.75708   CTTATAAATAAGTTA  TCGTGATAAAAAGAGTCC TGCG GGACTCTTTTT-TTACGC   CGTTTTTTCACCGCA  64 30
   CKO_02491 2307625 .. 2307637 +  -4.8  -3.43042   TGGGGTATCGCCAAG                CGGT AAGGC ACCG                GTTTTTGATACCGGC  54 309
   CKO_02502 2310968 .. 2311017 + -13.7  -2.57564   AATGCCCGATGGCGC TGCACTTATCGGGCCTACGGCACA ATA TGGTTCGTAGGCCGGATAAG-GCA CTTGTGCCGCCATCC  83 60
   CKO_02503 NONE
   CKO_02504 NONE
   CKO_02505 NONE
         lnt 2315300 .. 2315313 +  -6.7  -4.27259   TATTGCTTTGTTAAA               CAAGG TAAA CCTTG                TTTTGGCTATATGTG  72 112
   CKO_02507 2316607 .. 2316623 + -12.3  -5.94713   GATAACAATCTTCGA              GGGTAGC GCT GCTACCC              TTTTTTTTCTGGAGT 100 150
   CKO_02509 NONE
   CKO_02510 NONE
   CKO_02511 NONE
        rihA 2320111 .. 2320126 +  -4.6  -4.44245   TCCTGGAACACTTCG              CGCCAC TCCA GTTGCG               TTTTGTCGGTGATGT  68 297
        leuS 2323261 .. 2323271 +  -5.4  -3.35996   GCGTGCGACATCTGA                 CAAC ATT GTTG                 TTATCCCTGGCGGTG  56 53
   CKO_02515 NONE
        holA NONE
        nadD 2325530 .. 2325545 +  -8.2  -3.43722   AAGACTTCCGCCAGC              GCCGTC AGCA GGCGGC               TGTTCTCTTCCTGAC  64 40
   CKO_02519 2327278 .. 2327290 +  -3.4  -3.91191   TCGGGCCGTCTGGCA                TCAC GGCGA GTGA                TATTTCTGTTTTTTC  56 13
   CKO_02520 NONE
   CKO_02521 2328325 .. 2328337 +  -3.4  -3.65314   CACCAACCACCCTTA                TCAC CGTGA GTGA                TTATTAAGCCTTGAG  51 13
   CKO_02522 NONE
   CKO_02523 NONE
   CKO_02524 NONE
   CKO_02526 2333920 .. 2333950 + -16.4  -5.23316   ATATACTGAGTATCC       TGATAACTCCCACA CGC TGTGGGAGTTATTA       TTTTTTGATGTAATG 100 75
   CKO_02527 NONE
        lipB 2334994 .. 2335016 +  -7.7  -3.19255   ATCAATAAAATATAA           TGACCCACG CAATT CATGGGTCA           TTAACTATATATTGC  62 40
   CKO_02529 2336400 .. 2336410 +    -4  -2.71745   ACATTCCCTTGAATT                 GAAA CGC TTTC                 CTTCGTTATTCGCAA  45 171
   CKO_02530 2337444 .. 2337459 +  -7.5  -5.47159   TTAACGCATAAAAAA              CCCGC TTAAAC GCGGG               TTTTTTCTCTTCAGA 100 62
   CKO_02533 2339118 .. 2339133 + -11.8  -4.24123   AAGAGCATAAAAAAA              CCCGCC AGTT GGCGGG               TTTTGGAATTCTTGC  95 39
        dcuC 2342158 .. 2342168 +  -8.2  -3.30124   AATTGGCCGGATGGC                 GGCG TAA CGCC                 TTATCCGGCCTACAA  67 219
   CKO_02541 NONE
   CKO_02542 2346342 .. 2346354 +  -3.3  -3.14132   TAAATCCCGCACCCG                CCGCA GCA TGCTG                TTCGTCCCCGGCGCA  47 63
   CKO_02543 NONE
   CKO_02544 NONE
        citX NONE
        citG NONE
   CKO_02547 2351723 .. 2351746 + -12.5  -5.71983   CGTTATCCCTCTCAT          GCCAGTCAG ATAAAC CTGACTGGC           TTTTTTTATGGTTAA 100 74
   CKO_02548 2352747 .. 2352769 + -12.7  -5.10163   ATCATGAAAGCTAAA           CCCTCGCCG CCTGA CGGTGAGGG           TTTTCTTTTGGGATT 100 163
   CKO_02549 2353271 .. 2353291 + -11.2  -3.54424   TCACCCGTTTACACA            GAGGATGC TCCCT GCATCCTC            TTTCCGAAAATCACC  82 58
   CKO_02551 2355941 .. 2355951 +  -2.4  -4.05026   AGGGATGGAGCCAGA                 GTCG CTT CGCC                 TTCTTTCCATTTAGC  55 187
   CKO_02553 2356667 .. 2356681 +   -10  -3.10513   GTAGGTAACTTCAGC               GCCAGT GAA ACTGGC               TATGTGTTGCGCTCT  70 192
        dsbG 2357606 .. 2357636 +  -3.3  -4.32482   CTAAATTAAAGGGGG       GGGGATTGTCA TTGTTTTTC TGTCAATCTCC       TTTTCCATTATAAAT  62 43
   CKO_02556 2358738 .. 2358787 +  -5.5    -5.055   CCATCGCCGACACAA GCATTCAAAA-TTAAAATAATT AATATAA AATTAATTTAAGTTTTGGATGC TTTTTTAAACCTTGC  80 58
   CKO_02557 NONE
   CKO_02558 2361043 .. 2361061 +  -7.3  -3.06696   CACGCAGCATATCGG             CCAGCGC CAGTT GCGCCGG             TGTGTTGACGCAGAA  57 355
   CKO_02560 2363537 .. 2363553 +  -7.9   -4.4078   CGGTTTGTCCTCTTT              CAGCGCT GCC AGCGCAG              TTTTGATTGAGAACA  79 469
   CKO_02569 2371713 .. 2371743 +  -9.7  -2.74605   CTGTTTTAATTTATT      TGCCGGATAGCGGC CAAT GCC-CTGTCCGGCC       TGCATTTTAAAGCGG  68 32
   CKO_02571 2374108 .. 2374125 +  -4.1  -3.53444   CGCAAGCAGCGCGGA             GGTGC CGTATGAT GCACC              TTTCCCGCCGCCTGA  53 14
   CKO_02572 NONE
   CKO_02573 2375934 .. 2375986 +  -8.4  -4.67234   TTAACCATGCAGGCC CGGTCAG-CGACAGCGCCACCGGGCG ATT TGCCGGATGGCGCT-TAGACTAACCG TTTTTCCAGTTGAAT  84 57
   CKO_02578 NONE
   CKO_02579 2385265 .. 2385288 + -14.6  -4.82901   TTCTGATAACGACCG          CCCTCTCCCT GAAC GGGGAGAGGG           TTTTTATGAGAAACC 100 35
   CKO_02580 2386265 .. 2386280 +  -3.2   -3.5393   TCATTTCCCTGGCTT              CCTTCC AGCA GGAACG               TTTCCAGCCGGTAAT  49 334
   CKO_02582 NONE
   CKO_02583 NONE
   CKO_02584 2392191 .. 2392207 +  -4.4  -3.15427   GGTGATGCGCCCGTG             CGTCAGC CGCC GCTG-CG              TTAATCCCGCCTCTT  49 5
   CKO_02585 NONE
   CKO_02586 NONE
   CKO_02589 2397946 .. 2397961 +  -7.6  -3.05384   TTATCATCAATCCAC              TCGACA ATAG TGTCGA               TTACCTGAGCGGAAA  61 366
   CKO_02593 NONE
   CKO_02594 2400254 .. 2400274 +  -3.3  -3.68674   CTGCGCCCCGCCTGA            TTTATCGTT GAT ATCGATAAG            TGTTTTCGCACTTTT  54 26
   CKO_02595 NONE
   CKO_02596 2401237 .. 2401264 +  -7.6  -4.37527   GCATACGTTATTGTA        GGCCCGGTAAGCG TAG CGCC-ACCGGGCA        TTTTACTGCTTATCC  79 235
   CKO_02598 2403713 .. 2403734 + -11.6  -3.85698   TGCATAATATCCGCA           CAGCGGTC ATCATA GACCGCTG            TTTATAAAGGAGACG  95 61
   CKO_02599 2405436 .. 2405464 +    -3  -4.08216   TATAGCTTAAATCAT        GGTTGATCAGCG CAATC CGCTGATACCCC        TTTTCGACCAGATGG  58 465
   CKO_02604 2409976 .. 2409995 +  -6.4  -3.18264   TCAGTAAGCCAAAGG            CTTTCTGC GGCA GCAGATAG             TTGATGAGTACCACC  54 284
   CKO_02607 2414231 .. 2414247 +  -3.7  -2.75165   CATATTTTTAATTTT              GAAAGAA TAA TTCTCTC              CATTTTTATATCGTC  43 379
   CKO_02615 NONE
   CKO_02616 2423960 .. 2423974 +  -7.8    -3.322   CGAACCTGCGACCCA               CGGCTT AGA AGGCCG               TTGCTCTATCCAACT  64 117
   CKO_02618 2424848 .. 2424861 +  -3.9  -2.76404   CTGGGTTTTCTGCAA               GAATA GACA TATTC                TCAATTTTCCATCCA  44 20
   CKO_02620 NONE
   CKO_02621 2426510 .. 2426524 +  -2.9  -5.03145   TTTAACACGCTAACC               TCTTA AGCTA TAAGA               TTTTTTAAGAAATTA  72 36
   CKO_02622 2428003 .. 2428031 + -13.1  -3.14564   GACCGCATCATCCAG        CGCCAGCAGCG ACGTCCC CGCCGCTGGCG        TTCCTGAAAAGGTCA  81 294
   CKO_02629 NONE
   CKO_02630 2435540 .. 2435584 +   -10  -2.59191   CGTCGTCGCCTGATT CAGAGTGCCGGATGGCGACGC TATC GCGTC-TTATCCGGCCTACTG GTTATGCCAGTGTAG  68 28
   CKO_02632 NONE
   CKO_02634 2438511 .. 2438521 +  -2.4  -4.08394   AAGCCGAGAGTTGTG                 CACC ACA GGAG                 TTTTAAGACGCATGT  55 122
   CKO_02635 NONE
   CKO_02636 2440171 .. 2440181 +  -2.4  -5.33985   AGCGCGTAAAATCCC                 CGTC ATT GCCG                 TTTGTTTTTTTTCAG  76 90
   CKO_02637 2441297 .. 2441324 +  -7.7  -3.30124   AAGCTAGCGATTGCA        GGCGATTTGCCG GATGG CGGCTAA-CGCC        TTATCCGGCCTACAA  64 34
   CKO_02641 2444479 .. 2444490 +  -7.2  -3.80573   CGCAAAGTAGTCATG                CGCG TCTA CGCG                 TTTGGTGGTCATGAA  68 340
   CKO_02646 NONE
   CKO_02647 NONE
   CKO_02648 2451136 .. 2451179 +  -6.9   -3.6215   CTCCGGCATCACATC TTCTTTAAAT-GCGTCACCA CCAGT TGGTGGCGCGAATTATAGAA TTTCCGGTAGGTTAA  63 105
   CKO_02651 NONE
   CKO_02652 2454179 .. 2454229 +  -3.4  -3.12351   ACCCGGGCATGACTC CGCCAGGGTCAGT-AATTGCGTGC GCATA GCCTGCAATTCGCTGATG-TGGCG TTCAATCTCAGCGAC  43 116
   CKO_02654 NONE
   CKO_02655 NONE
   CKO_02656 NONE
   CKO_02657 NONE
   CKO_02658 2460231 .. 2460265 +  -7.7  -3.33261   TAAAGCCGGTGTGAT    C-CCCTCGCGGCGCGG ACAT CCGCGCCGCAATGACG     TTATGGAGATTCGAG  64 27
   CKO_02659 NONE
        hmuV 2462046 .. 2462070 +  -6.4  -4.53705   GATCGGTAAAACTTG          CGGAGCATCG AATGC TGATGCTCCA          TTTTCTGTAACAATT  75 32
   CKO_02661 2463666 .. 2463678 +  -4.9  -4.68593   ACGTGAGTTGCGCGT                TCTTT ACC AAAGA                TTTTTGGGTCATAAC  72 50
   CKO_02662 NONE
   CKO_02663 NONE
   CKO_02664 2466581 .. 2466599 +    -6  -3.74347   AAACAAACTTCTTGA             CCTTCC CCTTGAT GGAAGG             TTTACCCTTTATCAC  61 55
        copA 2469164 .. 2469207 + -13.9  -3.11208   GGCGCCTGCGCTAAC GCTTATCCGGCCTACGCAG CACTCT CATCGTAGGCCGGATAAGA TGCTTTTGCGTCGCC  85 41
   CKO_02666 2470144 .. 2470162 + -10.2  -3.56558   ATCGTTATTATTATG             CCAGGACG TAG CGCCCTGG             TTATGTCGATTGTCG  79 84
   CKO_02668 2470944 .. 2470963 +  -3.5  -4.37211   TCCGCATCAATAAAC            CCGGTAT TCACGT ATCCCGG             TTTATTATCAATTTG  64 204
   CKO_02670 2473900 .. 2473928 +  -9.6  -3.08813   TAAAGCCTGATTTTC        CTGCGGCCAAAG GTAAA CTTTGGTCGCAC        TCTCTTCCAGTCACC  70 31
   CKO_02671 2476314 .. 2476335 +  -7.9  -4.37198   AACTCGGCAATCGCC           CCCGGCAGC AGCG GGTGCTGGG            TTTTGCGTTTCGCTT  77 489
   CKO_02673 2478392 .. 2478437 +  -5.5  -5.00616   TCAGCTTCAGCATCA TATCGATGTGTTCCGGCGC GGCATTGA GCGCCGGAATGTATTCGTA TTTTTTACCGCCCGC  82 60
   CKO_02682 NONE
   CKO_02683 NONE
   CKO_02684 2488335 .. 2488351 +  -9.3  -4.08919   ACTTAGCCCACCGAC              GGCGTCG GAT CGTCGCC              TTTGATTTCGCGTTT  79 75
   CKO_02688 NONE
   CKO_02689 2496979 .. 2496994 + -11.8  -5.28176   CATCTCCTGTGAAAA              GGCCGC GCAA GCGGCC               TTTTTTCTGGATAAA 100 43
   CKO_02690 NONE
   CKO_02691 2498161 .. 2498173 +  -4.1  -3.65902   CCGTTAATTCCTATT                TTACG TCT CGTGA                TTTAGATCACATCAA  56 103
   CKO_02692 2498810 .. 2498823 +  -2.3  -2.65894   GCGCGAATCATTAAA               ACGCT GTAA AGCGA                ATTGTAACTGTTATG  39 17
   CKO_02693 NONE
   CKO_02694 2499680 .. 2499695 +  -3.2  -5.79595   AAACGTGCTGCGCTG              CCTTCG TTAT CAAAGG               TTTTTTGTTTTCCGG  95 303
   CKO_02697 2502069 .. 2502106 +  -8.5  -3.71487   GAAAAACCTCCGAAG  CGTACTG-CGCGGCAAG CCAATT CTGGCCGCGTCAGT-CG   TTGTTAAGTCTAGTC  72 436
   CKO_02700 2504673 .. 2504693 +  -9.7  -3.96506   AAGTTCTCATTATTT            GCTTCGGCA TAA TGGCGAAGC            TTCTCTTTTAACGTC  80 439
   CKO_02704 2505508 .. 2505527 + -13.6  -3.46602   CGCTGGATTTATTAA            CCCTCTCC GGCC GGAGAGGG             TTGTCCTGTGAGAGC  90 26
   CKO_02706 2507191 .. 2507230 + -22.2  -3.21218   CAATCGCAATTGAAA  ATGGCCGAATGGCGACGC AAAA GCGTCGCCATTCGGCCTG   TTGATGATCAGGCGT 100 28
   CKO_02709 2509178 .. 2509190 +  -9.1  -3.01712   CGATTCCTCACGCGC                GCTGG CCG CCAGC                TCTTCACCGGCAAGC  63 73
   CKO_02713 2514380 .. 2514400 + -11.1  -3.14344   AGCGGCATAAAAAAA            GCCAGGCTT TAC GGGCCTGGC            TTGCTGGAAAGGATC  77 40
   CKO_02715 2517063 .. 2517075 +  -7.7   -5.2197   GCGGCCATCCGCAGG                CGCTA CCA TAGCG                TTTTTCGTTTTTGTC  91 15
   CKO_02716 2517814 .. 2517825 +  -5.8  -3.30124   GTTTTGCCGGATGGC                GGTG CACG CACC                 TTATCCGGCCTGGCG  56 43
   CKO_02727 NONE
        ampG 2530878 .. 2530894 +  -4.5  -4.69549   CTCTTTGTTGATAAT              TAATTGT TAA ACAATTG              TTTTAATTTTACATT  69 228
   CKO_02729 NONE
   CKO_02730 NONE
   CKO_02731 NONE
   CKO_02732 NONE
   CKO_02733 2535957 .. 2535987 + -12.7  -4.69053   CCGCAACAAATCTTC      TGCCGGATGGAGGC TTAC GCCT-TATCCGGCA       TTTTATTGCCTGATA 100 49
   CKO_02734 2537478 .. 2537490 + -10.5  -3.30124   TGAGAAGTGCCGGAT                GGCGG CTA CCGCC                TTATCCGGCCTACAA  77 38
   CKO_02736 NONE
   CKO_02737 2539693 .. 2539714 +  -5.8  -2.57931   CGTCATCCGGCAATA           CGTTGCGC CTGATA GCGCGATG            CTTATCAGGCCTGCA  49 81
   CKO_02739 NONE
   CKO_02740 NONE
   CKO_02741 NONE
   CKO_02742 2545470 .. 2545514 +  -8.6  -3.53012   ATATTGCCCGATGAG CATGTAGGCCGGAT-AAGGCA TGTA TGTCGCCATCCGGCCTACAGG TTTAAAACAACCCGA  69 40
   CKO_02749 2550572 .. 2550584 +  -7.7  -3.54424   TTGCGCCTTTTTCAT                TCCCT TCA AGGGA                TTTCAAACAGTGGCA  66 292
   CKO_02750 2551507 .. 2551532 + -11.1  -5.82036   CCGGGCACAGAAAGA         GCACCGAACGCG CAA CGCGC-CGGTGC         TTTTTTATTTCTTCT 100 72
   CKO_02757 2558368 .. 2558384 +  -7.3  -2.87274   ATCAGGCAAAAAATT              GATAGGT GAA ACCTGTC              TCATTGATTGTCAGC  56 62
   CKO_02758 2559103 .. 2559118 + -10.4   -5.4756   CTCGAATTGAAAAAA              GCTCGC TATG GCGAGC               TTTTTTATTGCGCTT 100 45
   CKO_02761 NONE
   CKO_02763 2564479 .. 2564529 +    -9  -3.40775   TTCACCCAGACCGTA GCGGAAATGGCGGGCAGGCTGAG AACGCC CTCAGCCAGTTGGCC-TTTCCCC TCTTTGCCTCGCCAT  70 41
   CKO_02765 2566854 .. 2566865 +  -2.2  -4.08064   TCACCCACGGAATAC                CG-CG ACG CGACG                TTTTAGCGAACACTT  56 432
   CKO_02768 2569598 .. 2569613 + -10.4  -3.29511   CTGCAAAGAAAATAA              GCCAGC ATCC GCTGGC               TTATGGAAAGCTAAC  74 260
   CKO_02773 NONE
   CKO_02774 NONE
   CKO_02775 2576466 .. 2576489 +  -8.8  -2.57132   TTGTAGGCCCGGTAA          GCGTAGCGCC ACCG GGCATTACGC           CTTATCCGGCAAAAA  64 117
        rdgC 2578457 .. 2578492 +  -4.6  -3.35679   AAGCGCAACGCTAAG    TGAATATTCCCTCTCC GCCG GGAGAGGGAAGCGCCA     TTATAAATAGCGGCA  51 27
   CKO_02785 2582423 .. 2582437 + -11.4  -2.62983   AACGTCCTATCACAT               CGCTGC CGC GCAGCG               TCATCTGCAACTGGC  68 310
   CKO_02789 2585997 .. 2586021 +  -3.5   -5.0133   ACGCTTCCCATATCG          TAGCGGGGG GTAATCA CGCTCGCTA          TTTTTTGCAAACGTG  77 214
         ddl 2592472 .. 2592502 + -14.7  -3.80625   TGTTATGATGACGAT       GCGCCATCTGGTG TTGAT CGCCTGATGGCGC       TTTGGCTTATCAGGC 100 33
   CKO_02799 2593337 .. 2593383 +  -9.6  -2.91924   TGCCGTAATTTTGCG CTGGCGTCA-CCGTCATCAG TAACCCTCC CTG-TGCCGGATGACGCCAG GTTTATCCGGCCTAC  69 4
   CKO_02803 2597293 .. 2597321 +  -5.4  -5.38497   GATCAATACTCTGAA       GGCAAA-TGGTTG ATAT TGACCAGTTTGCC        TTTTTTCATTTCGAT  85 39
   CKO_02807 2602393 .. 2602414 +  -8.7  -2.57931   TAATCCTTTCTGAGA           TGCAGTGCC TGCT GGTACTGCG            CTTATCCGGCCTACG  61 38
   CKO_02808 2604273 .. 2604317 + -15.8  -2.57931   AGAATAAGGCGTTTA CGC--CGCCATCCGGCGCGGTG CCA CATCGTGCCTGATGGCGCTGCG CTTATCAGGCCTGCA  90 34
   CKO_02813 NONE
   CKO_02814 2608092 .. 2608104 +  -3.3  -2.76696   GCGCAGCGGGGGCAG                GCATC ATA GAGGC                ATTATTCGGCAAGAG  44 47
   CKO_02815 2608742 .. 2608770 +  -3.8  -2.57244   CCCTCGACCACCAGC       TGCTGACGGGGCA CTGA TGTCTCG-CGGCG        TGCGTTACTGGGTGA  42 9
   CKO_02817 2610423 .. 2610440 +  -5.5  -2.54812   AACAGACCAACGATA             C-CGGGCG CTA CGCCTGCG             GTTGCTGATGTGCAT  49 149
   CKO_02818 NONE
   CKO_02819 NONE
   CKO_02820 NONE
        fbpC 2616231 .. 2616241 +  -2.4  -4.07885   GCAAATGCTGCAATG                 CGGC GGT GACG                 TTTTCCAGCGCGATA  56 334
   CKO_02823 NONE
        lacI 2618500 .. 2618513 +  -2.3   -3.5485   CTCCTGTCCTTTACA               GCAGG AATC CCTTC                TTCGTATTTTGACTG  47 79
        lacZ 2621982 .. 2621994 +  -3.3  -3.36515   CACGTCCCTGTCCTC                CAGCG TGT CGCTC                TGTTTCGGGATCACA  47 362
   CKO_02831 2629267 .. 2629321 + -11.5  -3.65351   GCCGGATGGCGCTGC CG-CTTATCCGGCCTACGAGCTACGAG CAG CACTGAAC-CGTAGGCCGGATAAGACG TTTACGTCGCCATCC  82 101
   CKO_02833 2630761 .. 2630775 +    -7  -2.74488   CGGCCAACAGCAAGC               CGCCGC GCA GCAGCG               TCATTGCCGTGATTC  52 329
   CKO_02839 2638372 .. 2638412 +  -9.6  -2.91924   CGGCACGCCCAACCG  CTTCGCCTCGCGGATGGT CGTCA ACCCTTCGCGATGCGGCG  ATTTCTGCGCCATCA  65 257
   CKO_02845 2643274 .. 2643297 +  -7.4  -4.09864   CTGGATAAACCTGTT          TACCCTCCCG TTTT TGGCAGGGTA           TTTTGCGGAATAAAT  73 222
   CKO_02848 2645635 .. 2645649 +  -5.8  -4.43012   TAACATTTTGTGATT               TTTATC GCG GATAAA               TTTTAATCTTCCGCT  72 180
        tnaA 2647316 .. 2647349 + -12.3  -2.67171   CGGTGAAATAACGTT     CTGATACGCGCTCCC CTGC GGGAGCGCGATTCCG      CTATTTAATACGATA  78 30
   CKO_02850 2648723 .. 2648740 + -11.3  -4.10161   GGCATAAAATAAAAA             GGGAACC GCCG GGTTCCC              TTTTCAACACTGGTG  89 56
   CKO_02857 2654368 .. 2654407 + -11.4   -2.8547   AATACCGAATCATCT  TCGCGGCGGGTGCTTTCTG ATT CCGGCAG-ACCTGCCGCGA  TCTCATCTCCCGCCT  69 39
   CKO_02860 2656040 .. 2656085 + -10.4  -2.54687   TGATGCGGATTCGCT GCTGCGGCCTGAATCGCCAG GTCAGA TTGGTGATAGAGGCCGAAGC CTTCCTGCTCGTTAC  65 386
   CKO_02864 2659028 .. 2659051 +  -9.5  -3.54459   CCATTTTGGAGCGCA          CGGCGCCGA CGTCAT TCAGCGCCG           TTTCCAGAGAGTTCA  71 424
   CKO_02869 NONE
   CKO_02870 2661989 .. 2662001 +  -6.9  -2.89564   CGCGCGGTTTCCCGG                GCCTG CGC CGGGC                TGTATACCGTCGCCA  53 193
        flgA 2672584 .. 2672601 +  -5.5  -3.14211   GGGCATCGGAAGCCC             TCCTTCC GCAG GGCAGGA              TTCATCCGCAACCAT  50 96
   CKO_02885 NONE
   CKO_02886 NONE
   CKO_02888 NONE
   CKO_02889 2675796 .. 2675824 + -14.7  -4.11371   ACGCTATTTAGCAAT        ACGATTGGCTATG CCG CATAGCCAATCGC        TTTTACCAGATATTC 100 51
   CKO_02900 NONE
   CKO_02901 2687707 .. 2687724 +  -2.6  -3.53012   AGAACTCGGTGAGCT             CACGCG ATGAAC CGCTTG              TTTAACAGAAGCGGC  49 16
        fliP NONE
   CKO_02903 2688716 .. 2688732 +  -4.4  -2.52464   GATCCAGATCTTTCA             CCAGGCG GCGG CGC-TGG              TCGGTTAAGCGGCGA  44 1
   CKO_02904 2689499 .. 2689517 +  -8.1  -2.66316   AATACTGGCGAAGCT             CGACGCC ATAAG GGTGTCG             TAATGTCCTCCAGCG  61 4
        flhB NONE
        flhA 2692756 .. 2692777 + -10.2  -3.59979   CAGGAGATCGACAAA           GGAGATCG CGATGA CGATCTCC            TTTCCCATAACGACA  79 45
   CKO_02910 2697385 .. 2697407 +  -2.7  -5.06451   GTCTGACTGTCATTC           GCGGTTT TAAACGAAT AAGCCGC           TTTTTTCCCCTCATG  76 193
   CKO_02912 2698538 .. 2698567 +  -8.7  -5.40072   TGACTCCGTGTGCCT       TGTCGCATAAGTA ACTC TATTTATGCGACC        TTTTTTTAAACCACA 100 67
   CKO_02914 2700092 .. 2700116 +  -4.5  -2.70932   CTTCACCCACTTTCA          TTTTAATAAAT CTT ATTAATTAAAA          TAATTCACCCCGAAC  45 299
   CKO_02915 2701212 .. 2701223 +  -4.4   -3.9644   TAAAGAGCCTGATCC                GTCA TTAT TGAC                 TTATTGTATTCGCGA  58 67
   CKO_02917 NONE
   CKO_02918 2702489 .. 2702506 +  -4.1  -3.52102   TCCCTAGGCGTATAT             TCGC-CAG ACG CTGCGCGG             TTATGTCGATCCCGT  53 34
   CKO_02919 NONE
   CKO_02920 NONE
   CKO_02921 2706031 .. 2706052 +  -3.7   -2.7556   AAGATTTGATTTAGT           CATGATAGA AAAC TCTGTCAAG            TCATTAAATAGCGTT  43 161
   CKO_02922 NONE
   CKO_02923 2707429 .. 2707440 +  -4.4  -3.76373   ATGAGCGAGAATCAT                TCGT AATA ACGA                 TTTAAATATTAAGGA  56 9
   CKO_02924 2708198 .. 2708210 +  -5.5    -4.128   GCCGTCAATATGCTG                CTAGC TTC GCTGG                TTTGTATATACAAGT  66 145
   CKO_02925 2709149 .. 2709161 +  -3.3  -4.82901   AAATAGGGTACGACC                GTGAC AAC GACAC                TTTTTCTGGGCGACG  71 35
   CKO_02926 NONE
   CKO_02927 NONE
   CKO_02928 NONE
   CKO_02929 NONE
   CKO_02930 NONE
   CKO_02931 2714775 .. 2714785 +  -3.2  -3.32844   TATTCGCTTCATATG                 CGGT GAC ATCG                 TTATACGGTAGCCGC  47 67
   CKO_02933 NONE
   CKO_02934 NONE
   CKO_02935 NONE
   CKO_02936 2719416 .. 2719426 +  -4.6  -3.35046   GCACAGATTTATTTG                 GGCG AAA TGCC                 TGTTTAACACACTCA  51 8
   CKO_02937 NONE
   CKO_02938 NONE
   CKO_02939 2722425 .. 2722441 +  -3.7  -3.42574   GACCGTACAGCAGAC              CATGAAT ATG ACTCATG              TTGTAATGAAATTAA  49 112
   CKO_02940 NONE
   CKO_02941 2724734 .. 2724750 +    -3  -4.02456   TGGCGCAGAAGGCGT             CAGCCAG ACAG CTG-CTG              TTTATCGTCCTCTTT  56 109
   CKO_02948 2733034 .. 2733046 +  -2.7  -3.99386   GGTAGTACAAAAAAG                TCTTA GCT TGAGA                TATTTTCCTTTTTCC  54 322
   CKO_02954 2736763 .. 2736786 +  -5.2  -3.03619   AAAACCATCCTGTTT          TTCACGGGGA TCAC TCCCAGCGAA           TATTAGCGCGTAATT  50 40
   CKO_02955 2737883 .. 2737917 + -11.5  -2.94337   CTGATTGTCTTAATT    TGCCGGATGACGACGC TCAG GCGTC-TTATCCGGCC     TACTCTTTTGCACTG  75 37
   CKO_02959 2741978 .. 2742036 + -11.1   -2.8372   ATGCCGGATGGCGCT GCGCTTATCCGGCCTACAACTAACCCGG CCTA CACGCTGATTTGTAGGCCGGATAAG-GC ATTTACTCCGCCATC  74 54
   CKO_02961 2744146 .. 2744167 +  -8.7  -4.07246   AATAATCGCCATTCG           CCTGGCATA ATCT TTTGCCAGG            TTTCATTTCCCGTCA  76 36
        fadE 2748287 .. 2748304 + -14.1  -5.06816   TCACCTCCCCTGAAA             GCCCCGC TTCT GCGGGGC              TTTTTATTGCCACAT 100 44
   CKO_02966 2749227 .. 2749250 +   -14  -3.93695   GCTAAAACGACGAAA          GCCTGAATCA TTTC TGATTCAGGC           TTTCTGAATAGTGGC 100 106
        rnhA 2750777 .. 2750793 +  -2.9  -5.34857   CGCGCCCACGGCCTG              GCGAATC CGC GCTTTGC              TTTTATTTTGTTTCA  84 67
   CKO_02971 2752261 .. 2752275 +  -7.8  -3.42996   ATTCCTACTTGTCAT               TGGCGA ACT TCGCCG               TTATGATCGGTCGTC  64 43
        mltD 2753700 .. 2753722 + -10.6  -5.72622   GCATGACTCAGAAAA           GGCACTGG TTTCCCC CCAGTGCC           TTTTTTATTTATGCC 100 43
   CKO_02975 2756655 .. 2756686 +  -8.7   -5.0916   CTTCCGGGCTGACAA      GGCGATCGTTGCA GTCCAG TGCGGCAATCGCC       TTTTTATCTTCGGCA 100 88
        purH NONE
   CKO_02984 2766546 .. 2766562 +  -6.5  -2.62735   CAGTACGACGCGCCC              CTGACGC AAT GCGTCAC              TGGTCTGGCGGATCT  51 337
   CKO_02991 2771299 .. 2771312 +  -9.5  -3.21726   AATTTACATCCATTG               CCCCG TCGC CGGGG                TTACATCTTGTCGGA  71 61
   CKO_02992 NONE
   CKO_02993 2774030 .. 2774042 +  -3.4   -2.7083   AATCGCGGGGGCTGG                CGAT GAATG ATCG                TGACTTTATGCGCTA  43 16
   CKO_02994 NONE
   CKO_02995 NONE
        thiG NONE
        thiH NONE
   CKO_02998 NONE
   CKO_02999 NONE
   CKO_03000 2777957 .. 2777970 +  -9.5  -5.58179   TCAGGCATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTATTATGGTC 100 176
   CKO_03005 2789157 .. 2789185 + -13.2  -3.30159   CCCATAAAAACAAAA        GGCGCGAAATTG TATTC CAATCTCGCGCC        TTGTGCAACGATTAA  86 92
   CKO_03016 NONE
   CKO_03017 2793484 .. 2793511 + -15.8  -3.80733   GTTGAGAAAATAATG        TAAAAAGGGAGC CTTA GCTCCCTTTTTA         TTATTCTGCGCTGCG 100 28
   CKO_03026 2805690 .. 2805720 + -10.5  -2.77192   TACAAATCATCGTAG      GCCGGATAAGGCGGT TAC GCCGCC--ATCCGGC      ATTATTCCGCGACTT  72 267
   CKO_03030 NONE
   CKO_03031 2808821 .. 2808853 +  -8.3  -3.15663   GTCAAGCTTGCCGCT      GTCCAGTTGCGCCAG CAG CTGGTGCGTCTGCGC      TTCATGCAGATACAT  60 515
   CKO_03037 2814155 .. 2814189 + -13.7  -4.23104   GGCATTAACTGCTTA    TCACCTCGC-TACCCC TTTA GTGGTAAGCGAGGTGA     TTTATTAACATTTCC 100 33
   CKO_03038 2817106 .. 2817133 +   -17  -3.70571   CACGCATCGTCATAT        CCCCTCTCGCCC GCCC GGGCGAGAGGGC         TTTGAAATATTTCTG 100 45
   CKO_03039 2819096 .. 2819125 +  -4.9  -3.75897   TGCATAACCCGTGTA       CCGCCATCCGGCAA TTA TCGCTTGA-GGCGG       TTTACGTTCAACGTT  59 83
   CKO_03040 2820235 .. 2820250 +  -6.1  -3.95448   AAGCGATTTTCCGTG              CCCAG CGCCCC CTGGG               TTTCAATTTTAATGT  65 223
   CKO_03046 NONE
   CKO_03048 NONE
        gldA 2829670 .. 2829688 + -11.7  -5.95539   CAGGAGAGACAAAAA             GCCCGCA GATCG TGCGGGC             TTTTTTTATTTGCCG 100 45
   CKO_03053 2834514 .. 2834528 +  -8.5  -3.23274   TGCGACTCGGTGAAT               CGCCG GGTGG CGGCG               TTGCCTTATCCGGCC  65 28
   CKO_03056 NONE
   CKO_03057 2838854 .. 2838867 +  -9.5  -5.63517   GCAAAGACAAAAAAA               GCGCC TTTC GGCGC                TTTTTTCTTTGACAG 100 107
   CKO_03058 2839102 .. 2839114 +  -3.3  -2.71924   GAATATCTTTTTTCA                TGGGG AAA CCTCG                GTTTAAGGCCGCGTC  43 7
   CKO_03059 2841555 .. 2841565 +  -2.6    -3.494   AATATCCATCACACT                 TTTT ATG AAAA                 TTCTGTAACCGCTTC  49 73
   CKO_03060 2842665 .. 2842679 +  -7.8  -3.18467   GAGTTAATTATTCGT               GGTTCG ACG CGAGCC               TTAACTTAAACCTTT  62 2
   CKO_03061 2843816 .. 2843836 + -14.7  -2.52161   TTATATTTGCATTAT            GCCCCGTAC CGC GTGCGGGGC            CTGTATTCTGCATTT  86 62
   CKO_03062 NONE
        hslU 2845773 .. 2845790 + -11.3  -5.07486   TTTCATCACTGTTGA             TGGGGCT GAAA AGCCCCA              TTTTTATTGGCGCTA 100 56
   CKO_03064 2846749 .. 2846763 +  -2.9  -3.08032   TTTAACTGACAAATA               TCAAT GAACA ATTGA               TGATTTTGCAAACAG  43 36
   CKO_03065 2847325 .. 2847340 + -10.4   -5.5074   CGAGTGATCAAAAAA              GGCACC GTAA GGTGCC               TTTTTTATTGCGTTG 100 34
   CKO_03071 NONE
        glpK 2850825 .. 2850841 +    -8  -3.45023   TACCTTTATTGAACT              CAGCGA AACGG TCGCTG              TTATCCTCATAGTCG  64 355
        glpX 2852512 .. 2852533 + -12.3  -2.72166   TTGTTCGATTGAGCC           TTCCGGCCC TTCG GGGCTGGAA            ATCTTTCGTTCAACG  78 46
   CKO_03076 2853388 .. 2853399 +  -5.8  -3.30124   GCTCTGCCGGATAGC                GGCA TAAA TGCC                 TTATCCGGCCTACGG  56 80
   CKO_03078 2854608 .. 2854629 +  -4.4  -3.29727   CTGTTTCACAGACCA           TG-CCGTCC CTGAA GGGCGGCCA           TCTTCCTTAATTCGC  49 81
        tpiA 2855485 .. 2855511 + -10.1  -5.40072   CACACAAAATCACAG        GCCCGGTAAGCG TTAA CGCC-ACCGGGC         TTTTTTTACAAACGC 100 76
   CKO_03088 NONE
        cpxA 2863892 .. 2863903 +  -7.2  -3.30124   GTGGTGCCGGATGGC                GGCG TGAA CGCC                 TTATCCGGCCTACGA  61 49
   CKO_03091 2865690 .. 2865734 +  -4.8  -4.42806   GGCCGTTAATTCTGA CCGGAAGCGCCGGATGA-GGC ATAA GCCGTCATCCGGCAAAACGGG TTTATTTCACCGTAC  70 32
   CKO_03094 2869065 .. 2869098 + -10.3  -3.55444   TAATCGTTTTGCGTA     CTGTGATGACGCC ACTGGCTG GGCGTCATCCCGG      TTTCCCGCGTAAACA  79 38
   CKO_03096 NONE
   CKO_03097 2870479 .. 2870489 +  -4.6   -4.2349   CAGGCGTGTCCATCT                 CGTC TCC GGCG                 TTTTCCATCTGCGCC  66 465
        rhaB NONE
   CKO_03102 2873950 .. 2873999 + -17.3  -2.57931   CCGGATAAGACGTTC CGCGTCGCCATCCGGCAAT AAATGAAACACG ATTGCCGGATGGCGCTGCG CTTATCCGGCCTACG 100 62
   CKO_03103 2874910 .. 2874921 +  -7.2  -3.30124   AATCCAATGCCGGAT                GGCG GCTT CGCC                 TTATCGGGCCTACGC  61 51
   CKO_03104 2876144 .. 2876162 +  -4.5  -3.96624   AGTTGTATCTGGAGG             CGCTATG ATCCG CAAAGCG             TTTGTGATGCAGGTG  58 18
   CKO_03106 2876498 .. 2876511 +  -8.1  -3.30124   TCAACGCCGGATGGC               GACGC TAAC GCGTC                TTATCCGGCCTACAG  67 61
   CKO_03108 NONE
   CKO_03109 2878285 .. 2878299 +  -8.5  -3.37685   GCAGAAACGAAAAAA               GCGCC CTGAA GGCGC               TCTTTCGACAGTTTT  67 77
   CKO_03116 NONE
   CKO_03117 NONE
   CKO_03118 NONE
   CKO_03119 NONE
   CKO_03120 2890340 .. 2890363 + -10.2  -3.37796   TAATTCTGACGTCAG          GTCGGGTGGT GCGT GCCGCCCGGC           TTATAAATGGTAAGG  77 38
   CKO_03123 2891687 .. 2891728 +  -2.1  -3.78775   CTGAAGCTGCCCACA CCAGTCGCCTCGGTGCA-GA ATG TCATCCAGCGTCGCGACCGG TTTAATCATCAGAAA  52 466
   CKO_03131 NONE
   CKO_03132 2901304 .. 2901319 +  -3.2  -3.26471   AGATCGTCGACGAAA              TGATGG CCCG CCGTCG               TTAATGTGAGGATGA  45 6
   CKO_03133 2902602 .. 2902615 +  -4.5  -3.28712   GACATGCCGGATGGC               GACGT TAAG GCGTC                TTATCCGGCCGACGA  49 47
   CKO_03134 NONE
   CKO_03135 NONE
   CKO_03136 2906159 .. 2906172 +  -9.5  -3.61517   CAATGATAATAAAGG               CGCCC TTCG GGGCG                TTATTGAGGAGCGAT  75 41
   CKO_03137 NONE
        ompL 2908381 .. 2908398 + -12.7  -5.06816   CAGGATAATAAAAAA             GCCGCTG AAAT CAGCGGC              TTTTTGTTGCCGGAT 100 42
        glnA 2912253 .. 2912270 + -11.3  -5.24129   TGCCACTCATCTGTA             GCCCATC ACAC GATGGGC              TTTTTTCTCCACCAA 100 192
        glnL NONE
        glnG 2915009 .. 2915023 + -11.4  -2.69151   GCCACACGCCACAAA               CTGCGG TTG CCGCAG               TACTGTGTGCAGCGC  73 198
   CKO_03147 2917885 .. 2917914 +  -4.2   -3.0806   TAATTTGAATTATCA       ACAGACGCACTT TGTGAT GAGTGCGCCTGA        TATTCGCCATTTACC  47 136
   CKO_03149 2918503 .. 2918546 +    -3  -4.34486   CGGGGAATAACCCAC CGATATGCCGGATGGCGCCGC TGC GCGTC-TTATCCGGCCTACAG TTCTTTATTCTTGCT  60 31
   CKO_03152 2921952 .. 2921963 +    -3  -4.27062   ACATTTCATTTAATT                TCAT CCTG ATGA                 TTTAATTTTCATTAA  60 28
   CKO_03153 2923072 .. 2923092 + -16.9  -6.11392   AAGCGGAAAACAAAA            TCGCCGGTC AAT GACCGGCGA            TTTTTTTATTTCTTT 100 12
        mobA NONE
   CKO_03158 2926311 .. 2926330 + -13.6  -3.18134   GCATGAACGCAAAAA            GGCCATCC CTCA GGATGGCC             TCTTCACTTAATTAA  86 103
        metN NONE
   CKO_03167 NONE
        metQ 2935204 .. 2935227 + -14.6  -3.01125   ATCTGTAATATCATT          CAGGACGGGC GCTT GCCCGTCTTG           TCATTTATGCAAGCT  88 60
        rcsF 2935937 .. 2935950 +  -5.9  -3.01791   CCGTCTCGGCGGCAA               TGCCC GGAT GGGCG                TCTTCGCGACCCGCT  52 270
   CKO_03171 2936459 .. 2936477 +   -11  -3.09635   TCACTTTTTTTGTGT             CAGGCTCG CGT TGAGCCTG             TTCGATCGTCCAACT  75 88
   CKO_03172 2938235 .. 2938250 + -11.8  -5.21709   GGCTAAACAAAAAAA              CCCCGC TGAT GCGGGG               TTTTTTAATGTCCAG 100 35
   CKO_03176 NONE
   CKO_03177 2940622 .. 2940633 +    -3  -4.63932   ACTGTAATCGTCAGC                GAAT CCTG ATTC                 TTTTGTTGCCGGATG  65 17
   CKO_03197 2964035 .. 2964046 +  -7.2  -4.67552   CTCAAGCTCACGAGT                GCGC ATCA GCGC                 TTCTTTTTTGGTCAG  83 403
   CKO_03201 2965621 .. 2965650 + -13.5   -4.7497   AGCGTTTACCCGTAG       GCCGGATAAGGCG TTAA CGCCGCATCCGGC        TTTTTAATGGGTGGC 100 82
   CKO_03202 NONE
        dapD 2969214 .. 2969228 + -12.8  -5.51402   CAATGATTTGAAAAA               GCGGGC TGA GCCCGC               TTTTTTTACATCTGT 100 41
   CKO_03204 2969715 .. 2969727 +  -9.1  -3.30124   GTGTTGCCGGATGGC                GGCGT GTT ACGCC                TTATCCGGCCTACAG  70 46
   CKO_03208 NONE
   CKO_03209 2975747 .. 2975760 +  -3.8  -3.36175   ACAAGTAGAATAGAA               CCTG CGCAGT CAGG                TTCTCAGTGGGGATT  49 28
   CKO_03210 2976411 .. 2976439 +  -7.4  -2.52464   GGGCGTTGATTTCAC       TGCCCGAT-GGCG CTGA CGCTTATCGGGCC        TACATTCAGGAACGC  58 32
   CKO_03214 2980278 .. 2980294 +  -3.6  -3.61894   ATCACCATCACAATG              CCGGTG CGTAC CACCTG              TTCTTCCGACGCGTT  53 496
   CKO_03219 2988863 .. 2988876 +  -9.5   -3.0263   ATACTTCTTCGTGCG               CCGCG TTGG CGCGG                TATTCGCCGGATCGT  70 69
   CKO_03222 2991880 .. 2991894 +  -7.8  -3.54424   TTGCCGAATAAAATA               GTCTGC AAA GCAGGC               TTTAAGGAAATCACA  66 30
   CKO_03223 2992648 .. 2992663 +  -4.7  -4.25283   ATTAGTATTCTGGTC              GCGTA CGCAAA TACGC               TTTTCCTCACAGGGT  67 60
        dksA 2993348 .. 2993366 +  -9.5  -4.30704   ATCCGGCAAAATCCG             GGCGGGG TTATC TCCCGCC             TTATTCTTTTATATT  87 127
   CKO_03225 2994309 .. 2994319 +    -4  -2.68282   GATTAGCCGCTATTT                 TTAC GCA GTAA                 CTTGTCCTGATTGAT  45 46
        pcnB 2995743 .. 2995763 +  -6.8  -2.88544   CGCGCCACGCCGCGA            GGGAACCG CGTGA CGGTTGCC            TATATCGCGCTCGGC  56 13
   CKO_03227 NONE
        panB 2997175 .. 2997211 + -12.4  -3.30124   CGGATAAAACGCCCT   GCGT--CGCCATCCGGCA AAA TGCCTGATGGCGCTACGC   TTATCAGGCCTACAA  85 57
        panC 2998158 .. 2998180 +   -12  -3.37071   GCCTGAGAATTTCCT           CAAAGCAGGC GAC GCCTGCTTCG           TTATCGCTAAGATTT  82 67
   CKO_03230 2998622 .. 2998643 +  -8.7  -5.10933   ATTATATTAATAAAA           GGAGCCGAA AAAC TTCAGCTCC            TTTTATTTTAAATAA 100 58
   CKO_03231 2999622 .. 2999647 + -17.7  -4.43477   AGGACTGTTGTTCTT         CATCCTCTGGC TTAA GCCAGAGGATG          TTTTCGTTACATCCA 100 46
   CKO_03232 3000530 .. 3000540 +  -8.2  -3.70722   GTCTCGCCATTAGTG                 CGGC ATT GCCG                 TTCTCTGTTCATGCG  72 130
   CKO_03233 NONE
   CKO_03234 NONE
   CKO_03235 NONE
   CKO_03236 NONE
   CKO_03237 3006505 .. 3006519 +  -2.1  -4.16307   TTCACCGCCCGGCAC              TGCGCC AGCG GGC-CA               TGTTTTTCTTCCAGA  56 436
   CKO_03241 3009286 .. 3009324 +  -7.5  -3.86346   AACCACAAGTAAACG  TGTATTGCCGGGTGGCGGC TAC GCC-TTACCCGGCC-TACA  TTTCTACGGACATAG  71 29
   CKO_03243 3012516 .. 3012527 +  -7.2  -3.30124   ACGTTTATGCCGGAT                GGCG GCTT CGCC                 TTATCCGGCCTACAG  61 40
   CKO_03245 NONE
   CKO_03246 NONE
   CKO_03247 NONE
   CKO_03248 3016475 .. 3016498 +  -9.5  -3.43751   GCGGTATAAGCGTAA          CGGCGGAGC ACGGAG GCTCCACCG           TATTTAGCGTTGTTG  73 32
   CKO_03250 3016979 .. 3017006 + -12.8  -3.29973   GAATAGAAATAAAAA        TGCCCGGTGACGC AAG GT-TCACCGGGCA        TTGATGCGTTTTTAC  85 16
   CKO_03253 NONE
   CKO_03254 NONE
   CKO_03255 3022486 .. 3022501 +  -7.5  -5.38054   TACCCCAATAAAAAA              GCGGC CGCTAA GCCGC               TTTTTCTTTATCCAC  95 112
   CKO_03257 3026290 .. 3026304 +  -4.2   -3.8647   TACATAAGTACGAAC               CTGCTC GGC GAACAG               TTTCATATAGTCAGT  58 133
   CKO_03261 3030148 .. 3030159 +  -3.6  -2.71731   TTGCAAACTTACACA                CGCG TCAC TGCG                 TAGTTCAAAAATAAC  43 64
   CKO_03262 3031588 .. 3031610 +    -2  -3.24089   CCCTCACTCGCAAGA           GTGAGG GTTGCAACCTG CCTCAC           ATTTTCCTCTGTATA  43 50
   CKO_03263 NONE
   CKO_03264 3034222 .. 3034232 +  -2.4  -4.65747   GATCGCCACCACCAC                 CGCC AGA GACG                 TTTTCTTCGCCATTG  65 172
   CKO_03267 3036598 .. 3036645 +  -3.5  -3.53444   TGCCCGATGGCGCTC CG-CTTATCGGGCCTACAAA CGATGTAAA TCCGTAGGCCGGATAAGGCG TTTACGCCGCCATCC  51 54
   CKO_03268 NONE
   CKO_03269 NONE
   CKO_03270 3039885 .. 3039899 +  -7.2   -3.7732   GGATTACAGGCTATT               GAAAAC GCG GTTTTC               TTGTTCCTGTACCCG  66 71
   CKO_03272 3041126 .. 3041138 +  -3.3  -2.60763   TTATCAAACCTAAAT                CCCAG GAT CTGGA                CTTATGAGGTATACA  43 6
        coaE NONE
   CKO_03274 NONE
   CKO_03275 3043038 .. 3043061 +  -7.4  -3.55622   CTTCTTCCTGCAACT          C-CCGGATCAG CGC CTGCTCCGGCG          TTTCGCCCGCTTCGA  62 354
   CKO_03294 3065335 .. 3065364 +  -8.6  -3.55444   TTGGCAGGTGAATAT      TTGCCCGGTCAGCG ACAA CGC-G-CCGGGCGA       TTTGCCAGATGGCGG  69 446
   CKO_03304 NONE
   CKO_03305 3073647 .. 3073657 +  -2.4  -2.83164   CATTGCCCGTTATGT                 CGCC GAA GGGG                 TGTAATCATGGCTAA  40 10
   CKO_03306 NONE
        leuD 3075737 .. 3075766 +  -7.1  -5.03715   CTGTCACTCTGTGTA       GGCCGGAT-AAGGC GAA GCCGTCATCCGGCA       TTTTTTACACATCCT  86 81
   CKO_03312 3079078 .. 3079102 +  -9.4   -3.5394   ATAACGCCGGCGAAG          GGATTTGAGA CTGCT TCTCAAGTCC          TTTGCCACCCACTTT  72 160
        tbpA NONE
        thiP NONE
        thiQ 3082417 .. 3082430 +  -3.8  -3.29144   CGCTTACCGGGCCTA               CGGA CAGGCA TCCG                TTGTAGGCCGGATAA  47 61
   CKO_03319 3086262 .. 3086272 +  -2.4  -3.34984   GACCCATTAAGGACA                 CGAC AAT GACG                 ATTTTTGACAACTAT  45 31
   CKO_03320 3087785 .. 3087796 +  -3.6  -3.30124   CAGTTGCCGGATGGC                GGCG TAAA TGCC                 TTATCCGGCCTACAG  49 41
        araD 3088620 .. 3088640 +  -6.2   -5.1675   GCAAAACGTTCCAAA           CCAGGCTAT AATC AT-GCCTGG            TTTTTTAATGAGTAC  85 82
   CKO_03322 NONE
   CKO_03323 NONE
   CKO_03324 3094752 .. 3094794 + -12.9  -2.78996   GTGCCGGGGGCGCTT CG-CTTGCCCGGCCTACCGTT CTC AACG-TAGGCCGGATAAGACG CTTTACGTCGCCATC  82 56
   CKO_03326 3098387 .. 3098397 +  -8.2  -3.35813   GATTTACCACGTAAT                 CCGC ATT GCGG                 TTAATTGAAATGGAA  67 48
   CKO_03327 NONE
        pdxA NONE
        ksgA NONE
        apaG NONE
        apaH 3102741 .. 3102756 +  -3.2  -4.37092   CAAAGGCGAGGCGGT              AAACGC CTGA GCGTTA               TTTTGTAGGCCGGAT  60 16
   CKO_03342 NONE
   CKO_03343 NONE
   CKO_03344 3114424 .. 3114440 +  -2.2  -2.59135   GCTGCGCTTACCGGG              CCTACA AAAAA TGCAGG              AATTTATTTATGAAC  39 56
   CKO_03345 3115670 .. 3115707 + -10.6  -2.78032   AGTTGAGGATTAAAC   GCA-AAGCGCTAACCGG TTTAT CCGGTTAGCGCGCATGC   CTATTTTCGAACGGA  72 28
        caiC NONE
   CKO_03347 3118107 .. 3118138 +  -6.4  -2.57931   CCGGTCTGGAAAGGC      CGCTAGCGCCGCGC TGCC GGATGGCGCTAACG       CTTATCCGCCATCCG  52 20
   CKO_03348 3118947 .. 3118962 +  -8.2  -4.20712   GCGGAACCGGCATTC              GCGGGG TTCT CTCCGC               TTTTACCATCTTCTC  77 202
   CKO_03352 NONE
   CKO_03353 3124295 .. 3124313 + -11.8  -2.94099   ATGCTAAAAATAATA             GGGCAATA AAT TATTGCCC             TATGTAATCAACAAA  78 0
   CKO_03356 3127319 .. 3127332 +  -3.8  -3.16564   CCAGATAATCCGGCG               CCAG CAGGGC CTGG                TTGGTCACGTCCAGC  47 348
   CKO_03360 NONE
   CKO_03361 NONE
   CKO_03362 3133329 .. 3133357 + -12.3  -3.21747   CGACATCGGCCTGTT        CCGCCAGCGCGCG CAC CGCTTCCTGGCGG        TTCGTCGTGGCGTAG  78 390
   CKO_03368 3139498 .. 3139511 +  -9.5  -5.76633   AGCTTTGTAAAAAAG               CCCGC GCAA GCGGG                TTTTTTTATGTCTGC 100 57
   CKO_03372 NONE
   CKO_03374 3145379 .. 3145399 +  -2.6  -4.12198   TTCGGGGAAACTATT            TCACCATT CGATT AATGATGA            TTTTGAGGAATTATG  56 101
   CKO_03375 3145986 .. 3146009 + -15.4  -4.62302   CGCACTAATCTTCCG          TTATCCCCCC GACC GGGGGGATAA           TTTTTACAGCTGTTG 100 33
   CKO_03379 3150830 .. 3150849 +  -3.6  -5.52986   GCGCGGCAATCACAA            CC-ATCGAT CAA ATCGGTCGG            TTTTTTTGCTAAAGT  85 40
   CKO_03380 3151797 .. 3151815 + -11.8  -2.90322   CGTCGCGGCGATCAT             CATGACGA TGC TCGTCATG             CTTATTATGATGCGG  75 153
   CKO_03387 NONE
   CKO_03388 3159804 .. 3159837 +  -3.1  -4.46212   TAGCACGTCACATTT     TTGACGTCGGGATCGT CAA ACGCTTC-GACGACGA     TTTTATGGTCAGGCC  64 272
   CKO_03390 3161363 .. 3161375 +  -9.1  -3.90645   CGTGCCATTCACTAA                CTGGC GAC GCCAG                TTCTCTTCTTCTTCG  73 352
   CKO_03392 3162706 .. 3162727 +  -8.7  -3.23572   GAGCAGCTCAACAAA           GCGTAACCA CTCC TGGTGACGC            TGTTCTGCCATCGCT  65 484
   CKO_03395 3167121 .. 3167140 +    -5  -3.29273   CGCAAAATCAATATA            TTGCGCATG GCC CA-GCGCGA            TCTTATCGTAATCAG  52 468
   CKO_03399 3170071 .. 3170095 +  -4.2  -3.57144   AATTCTCGCGCACCT          GGCGCAGA ATATCGGCA TCCGCGCC          TTTCAGCGTCGCCAC  52 496
   CKO_03401 NONE
        lplA 3172774 .. 3172788 +  -5.6  -4.26903   AAAACGTATTCAGAA               GGCAAG TAA CATGCC               TTTTCGTACCATCAC  69 370
   CKO_03403 3173559 .. 3173582 +    -6  -4.62069   ATATCTGTACAACAA          CTCCCTAC ATGGATGG GTGGGGAG           TTTTTCCAATAGAAG  74 58
   CKO_03404 NONE
   CKO_03405 NONE
   CKO_03406 3177501 .. 3177523 +  -7.6   -5.1361   GAAGCGCCATCAGGC           GTAAGGGGCA AAG TGCCCCCTTC           TTTTTTACGCTTTAT  91 192
   CKO_03411 NONE
   CKO_03412 3184861 .. 3184877 + -11.5  -3.65351   TGCTGAATACCCGTG              CCGCCTG TTC CGGGCGG              TTTGGCTGCCCCTGA  79 250
        rsmC NONE
   CKO_03422 3192484 .. 3192504 +  -6.9  -2.62396   TGCGCCTCCGTGGTA            GCGATTCTT TTT AAGAATCGA            TGGTATGCGAAGGTG  55 64
   CKO_03428 3194502 .. 3194512 +    -4  -2.76885   TATCGCTATCATTAG                 GATT AGC AATC                 ATTATCATTTAGATT  46 101
   CKO_03429 3195342 .. 3195355 +  -9.5  -3.62046   CGCTGAAATAAACAA               GGCGC CGCT GCGCC                TTGTTCAACACGTCA  75 30
   CKO_03432 3197672 .. 3197687 +  -4.6   -3.5764   CAAGCAATCCGGCAT              CTGAGC TGAC GCCCAG               TTTAGACATCACATT  52 164
   CKO_03435 NONE
   CKO_03436 3200777 .. 3200813 + -14.6  -2.91239   CTTTTCTCCCTGCGC   TCAGGCAGGGTGAGG CCGCTTTC CCTCACCCTGCC-GA    TATCTCCCGTCTGTG  87 43
   CKO_03437 NONE
   CKO_03438 NONE
   CKO_03439 3202940 .. 3202954 +  -4.9   -4.1711   AAAGAGATTACGCCG               CCTGC CAAAT GCGGG               TTTATTGAGGATCAT  64 247
   CKO_03440 3205278 .. 3205301 +  -6.1  -2.89564   AATTCTTTGTACAGG          CCCGA-TAAC ACAAC GTTAATCGGG          TCTGTACAATCCACG  54 39
   CKO_03441 3205857 .. 3205869 +  -6.9  -3.30243   TTTGAAGCGCCCGAT                GGCGG CTG TCGCC                TTATCGGGCCTACAT  61 36
   CKO_03443 NONE
   CKO_03444 3210580 .. 3210593 +  -5.9  -3.13403   GCGGCGACGGAAAAG               GCGGC ATGC GCTGC                TGTTAATGGAGGCAC  54 6
   CKO_03445 3211814 .. 3211824 +  -2.4  -3.28924   ACACCAGATCGCTGT                 CCGG GTG CAGG                 TTCTGGCCGAACATA  43 272
   CKO_03450 3216177 .. 3216204 +  -4.8  -2.79796   GCGATGGAATAAGCC        CGCCCGGCAGAAC GGC GTT-TACCGGGCC        TGTGATGCGCTGGCG  49 29
   CKO_03451 NONE
   CKO_03453 3218625 .. 3218649 + -18.6  -5.02074   TTATCTGCGCCGACA          GCAGGCCCCG CTATA CGGGGCCTGC          TTTTTTAAGCGATAC 100 64
   CKO_03456 NONE
   CKO_03457 3223605 .. 3223620 +  -5.4  -3.42996   GCAGATCAATAAACA              CCTTGT TTTT ACAGGG               TTATAATGCGTGATC  56 41
   CKO_03458 3224828 .. 3224838 +  -2.4  -3.15621   AAATGCTGTAAGGAG                 CGCC CGT GACG                 TATTCGATTGGCATT  43 30
   CKO_03459 NONE
   CKO_03460 3225873 .. 3225888 +  -3.2  -3.73212   CGCGTATATCTTGCC              GGGC TCTCACAC GCCC               TCTATTTTTTACTTT  52 50
   CKO_03461 3227347 .. 3227384 +  -9.1   -5.0538   CCGTATTAATAGCCG   CCGAAAGGCGGCTATTG CGTT CCAGAGACGTCTTTCGG    TTTTTTCACGTAAAG 100 217
   CKO_03463 3228417 .. 3228449 +  -8.3  -3.17051   CCCGTACTATTTTAA      CGCTTGTCAACCCGG CGG CAGGGTTGCCGATCG      TGTTACTCCTCCACA  65 26
   CKO_03464 3228665 .. 3228697 + -12.7   -4.5538   CTTCCGGGTGTAAAT      CCAGGCAGGCCTGTC AGC GACAGGCCTGATTGC      TTTTGTGAGTTTTAT 100 122
   CKO_03468 NONE
   CKO_03469 3234785 .. 3234805 +   -14  -2.65284   ATTTGATTCTGTTTC            CCCCCGGA TAAAT TCCGGGGG            ATCTGTTTATATTAT  83 44
   CKO_03475 3242261 .. 3242273 +  -4.8  -2.96695   GATTTTTACTGCCTG                GCAG GGACG CTGC                TGCTTTGATAACCAC  50 90
   CKO_03476 NONE
   CKO_03477 3242624 .. 3242638 +  -5.7  -2.84919   ATAGTCCAGGTCAGT               CTGGA ACAAA TCCAG               TCGTTCTCCCTCAAT  50 37
   CKO_03478 NONE
   CKO_03479 3244362 .. 3244372 +  -6.8  -3.28712   TGACCGGGCATTAAT                 TCGC GAA GCGA                 TTCTGCACGCGGCCC  59 70
   CKO_03480 3245180 .. 3245196 +    -8  -3.07443   AAAGGTGCTTTGTCA              GTGGCT GAGTG AGCCAC              TTGAATCGAGTATCG  61 18
   CKO_03481 3246186 .. 3246200 +  -2.2  -4.56597   TAATACACATTTAAG               TTAGTT GAA AATTAA               TTTTTACAACAAAGA  63 148
   CKO_03482 3246985 .. 3247007 + -17.8  -3.74872   ACGAGACGCAATTAA           TGCCACCTGC TAT GCAGGTGGCA           TTTACTGGGCTAGAT 100 328
   CKO_03483 3248004 .. 3248020 +    -8  -3.36327   CTCGAGTTCCTAGAA              GCGGAT ATAAC ATCCGC              TTCTCACTCAAGTAA  64 102
   CKO_03487 NONE
   CKO_03489 NONE
   CKO_03490 NONE
   CKO_03491 3252917 .. 3252929 +  -3.3  -2.87463   CGCGGCTACTGCAAC                TCCCG GCT CCGGA                TATCTGGACAGCGTT  44 216
   CKO_03492 3253673 .. 3253684 +  -2.2   -2.9062   CAAAACCCACCGATA                GTCT ATCA AGGC                 TGGTTCTCTGATGGG  40 114
   CKO_03493 NONE
   CKO_03494 3256759 .. 3256784 + -16.3   -4.1552   TCATTCATAGCTAAA         GTAACCGCAGA ATAA TCTGCGGTTAC          TTTGTTAAAGAGATG 100 11
   CKO_03499 3263167 .. 3263194 +    -2  -3.18274   CTCGCCGGGGCGCGA        CTGCATCATCATG CCG CATCCTGA-GCAG        TTCGCTTCACGTGAG  43 2
   CKO_03500 3263515 .. 3263534 +    -5  -2.55351   ACGGGCGCAGCAGCC            GTTA-GCGC TGA GCGCATGAC            CTTCATATCAACGGC  47 7
   CKO_03501 NONE
   CKO_03502 3265357 .. 3265373 +  -3.6  -2.73875   TTGCCCGTCTGTTGC              GCCCTG AAACC CAGAGC              TGCTATTGCACGGCG  43 65
   CKO_03503 3265888 .. 3265909 +  -2.1  -2.90075   TTCCCATCGCCTCCC           GGCTGCGGC CCTA GCTGGAGCA            TCTGCTTGAAGAAGC  40 12
   CKO_03504 3266365 .. 3266379 +  -2.8  -4.72272   TTGTTGTAGATTTTC               CGATTA CCA TTATCG               TTTTTGGTGCGAAGG  65 156
   CKO_03514 3276520 .. 3276539 +    -3  -4.53349   ATAGACAAACAATAA            CTACACATT TAA AAT-TGTAG            TTTCTTTGATGATTA  62 338
   CKO_03515 3277700 .. 3277714 +  -4.3  -5.02357   ATATAAATAAATTAA               GCATA AGGAA TATGC               TTTTATTTAATTATA  76 171
   CKO_03516 NONE
   CKO_03517 3279431 .. 3279451 +  -4.7   -3.3375   ATATAGCCCAATGTA            TTGATCGTT TAT ACCGATCGA            TGTTCTAGTGTTGAT  54 64
   CKO_03518 NONE
   CKO_03520 3280810 .. 3280832 +  -7.6  -5.00616   TCAAGGGAAAATTTA           GCCCGCAGTT GAA ACCTACGGGC           TTTTTTACAAAAAAC  91 60
   CKO_03530 3289100 .. 3289118 +  -8.9  -3.85114   AAGCAAAACTAAAAA             GAGGCTA TAGAT TAGCCTC             TTTACTGTCAGATTT  77 16
   CKO_03534 3293087 .. 3293108 + -15.1  -4.27192   TTTTGATTGCCTTCA           CCGGGCGGC ATTC GCTGCCCGG            TTTTGCTCCCCCTTT 100 35
   CKO_03535 3294739 .. 3294762 +   -16  -2.98942   ATCCTGGTTCGCTAA          GCGCAGCGCT TGAT GGCGCTGCGC           TGTATCTGGCCGGAT  93 49
   CKO_03537 NONE
   CKO_03539 NONE
   CKO_03540 NONE
   CKO_03541 NONE
        valS NONE
   CKO_03543 3302748 .. 3302772 +  -2.9   -3.1886   CAGCAACACCAAGCT         GCCGATAATG ACGTTA CGTT-TCGGC          TTCATACGCTTCCCT  45 469
   CKO_03549 3305983 .. 3306011 + -13.1  -2.91772   TGTAAGTCACCCACA        GGCCGGATAAGGC GAC GCCATATCCGGCA        ATTTATGCAAACATT  82 36
   CKO_03551 3307639 .. 3307685 + -18.9  -4.18018   GCGAAATAACGATTA CGTCTTATCCGGCCTACAG ATCGTGCTC CCGTAGGCCGGGTAAGACG TTTTGCGTCGCCACC 100 32
   CKO_03552 NONE
   CKO_03554 3308767 .. 3308805 +  -4.6  -4.24413   AAAATTAGCTGAACA   GTAATGACTGCAAACAAT TTA ATTATTTGCAGCCACCAC   TTCTTTATTCCTGAA  64 304
   CKO_03555 NONE
   CKO_03556 3311014 .. 3311030 +  -7.2   -2.5955   CGCATAAGTCGATTT              CTGCCG GATGG CGGCGG              TGCCTTATCCGGCCT  55 34
   CKO_03557 3312129 .. 3312159 + -14.7  -3.31726   GGCGACTAACCCCTC       CGGGCATGTGCCG CCTGA CGACGCATGCCCG       TGTTATCTGGAGAGA  93 32
   CKO_03558 3313603 .. 3313649 + -14.8  -2.71791   CGCCGGATGGCGCTT CG-CTTATCCGGCCTAC-AAGT TACGC ATTTCGTAGGCCGGATAAGGCG CTTTAGCGCCGCCAT  86 45
   CKO_03560 NONE
   CKO_03561 NONE
        pyrB NONE
   CKO_03563 NONE
   CKO_03564 3316528 .. 3316554 + -10.1  -2.93393   CAGTGCCATTTGTAG        GCCCGGTAAGCG CCAG CGCC-ACCGGGC         ATTTATCACATCACC  69 97
   CKO_03568 3321836 .. 3321854 +   -11  -2.90075   GGTTTGTGGCAATTA             TGGCGGTA TGA TACCGCCG             TGTAATTAAACCAAA  74 215
        treR 3322979 .. 3322992 +  -2.3  -5.27779   ATCTTCGCTGCGTTT               CGGGA ACGT TCCCA                TTTTTTAATATTCAC  76 65
   CKO_03571 3324523 .. 3324533 +  -5.4  -2.96444   CGTCAGGGCACGTTG                 CAGA TTG TCTG                 ATTCTTCTTCGGGGC  52 14
   CKO_03572 3326245 .. 3326276 + -13.8  -2.76696   GCAAAAGTAATCACA      ACGGGATACGGACA GACC TGTCTGTATCCCGG       ATTATTCAGCCCACA  84 31
   CKO_03573 3327258 .. 3327276 +  -8.2  -3.09015   AGTTCCAGCTGGCCT             TCTCGTTG ATA TAACGAGA             TTGCGTCAATATCAA  60 100
   CKO_03575 NONE
   CKO_03577 NONE
   CKO_03578 NONE
   CKO_03579 3334367 .. 3334389 +  -2.7  -3.53224   CCCTCCTGCGTCAAA          CCGGT-CG TTTCTTTT CGCACCGG           TTTGACGAACGCCTG  49 42
   CKO_03580 NONE
   CKO_03581 NONE
        nrdG 3337507 .. 3337528 +  -7.4  -3.76839   TTCAGGATAAACAAA           TGTAATGC GTTATA GCATTACA            TTTGCATTAACATTC  69 68
   CKO_03595 3347829 .. 3347841 +  -9.1  -3.30124   TATTTGCCGGATGGC                GACGC AAC GCGTC                TTATCCGGCCTACAG  70 113
   CKO_03598 3350657 .. 3350670 +  -6.7  -4.21974   ATAAAACGCGCAGCG               TTGCC ATCC GGCAA                TTTATTGCCTGGTGG  72 70
   CKO_03604 3357393 .. 3357412 +   -10  -5.24531   CGTAATTTTTTAAAA            GCCCTCAT ATTT GTGAGGGC             TTTTTTATGCCGGGT 100 63
   CKO_03607 3359350 .. 3359366 + -13.7  -3.21747   TATCGATACTGTAAT              CGCCCAG CAA CTGGGCG              TTGGTCATCCAGTGG  87 271
   CKO_03611 3365848 .. 3365870 +  -9.1  -4.27259   TAGCGACTGAAATTA           CCGGCCC ACATCCTTC GGGCCGG           TTTTCAATGTGTATA  83 81
   CKO_03612 3367311 .. 3367329 +   -16  -5.33785   CCCTGGAAACATCAA             CGGCTCCC ATT GGGAGCCG             TTTTTTATACTACTT 100 49
   CKO_03614 3368690 .. 3368709 +  -6.4  -2.83271   GATGTTCGCCCAGCT            GTTGCAGG TACT CTTGCAGC             TCGTTGTCGGCATGG  50 258
        cpdB 3371823 .. 3371837 +  -7.2  -3.69094   ACCTTTTTGTACGTA               CTTACT AAA AGTAAG               TTTAAGTGCTAGCTT  66 520
   CKO_03618 3372949 .. 3372987 +  -5.9  -3.70902   CCTCACACCCACGAA   GCCTTCGGTATCGGC GCGATTGAA GCCGGCGCCGAACGC   TTTCGCTATCGCGGC  61 239
   CKO_03619 NONE
   CKO_03621 3374807 .. 3374822 +    -6  -3.01712   CTCTTCAAGCGCTAC              GGCGGC AGTC GCCGAC               TCTTCCACCAGCGCG  52 149
   CKO_03623 3377231 .. 3377265 + -15.1  -3.53012   CCGGATGGCTCTAAC     GCTTATCCGGCCTAC AATCC GTAGGCCCGGTAAGC     TTTGCGCCACCGGGC 100 48
   CKO_03626 3380562 .. 3380598 + -12.4  -3.90744   CGCGATTGCAGGTCT   GAT-AAGCGGTAGCGCC ATCA GGCGTTACCGCTTCACC    TTGTTTACCCACCAG  95 90
   CKO_03628 3382207 .. 3382220 +  -8.1   -3.6422   GTTTGATAGCGCGAG               CCAGC TGAC GCTGG                TATTTTGCACGGGTA  68 102
   CKO_03632 NONE
   CKO_03634 NONE
   CKO_03635 3383744 .. 3383761 +  -9.8  -5.24129   GCCATAGTTTGACTT             GCCCCC TTCACC GGGGGC              TTTTTTATGGCAAAA 100 67
   CKO_03637 3386060 .. 3386072 +  -6.9   -3.4285   CCTTACTTAAACTGC                CGCCG CAG TGGCG                TTATCAATTAAATCC  61 54
   CKO_03640 3386852 .. 3386867 +  -3.2  -2.57877   CGGAACTCCTTATTA              AGCAGA GTGT TCTGCC               AGTTGTTTTTCTGCA  40 25
   CKO_03645 3389686 .. 3389703 + -12.7  -5.14985   GTAATTGTTCTCCGA             TGCCGGG TTTT CCCGGCA              TTTTTCTATATTTAC 100 37
   CKO_03646 3390719 .. 3390733 +  -3.5  -4.10161   ATGCCATAGCAGCAG              C-GGCC GGTC GGCCAG               TTTTGGCAACTGATG  60 208
   CKO_03648 NONE
   CKO_03649 3392568 .. 3392581 +  -3.1  -3.72576   TCGTTGAGCAGCTCA               TAGAC GCCG GTCTG                TTTACTCAGCACCCG  51 397
   CKO_03655 3398363 .. 3398376 +  -8.1  -3.24825   TACGACGACGACGAC               CGGTG GTGG CACCG                TATTCGTTACCCTGC  62 467
   CKO_03658 3399595 .. 3399621 +  -8.7  -4.75472   TATATAAAAAGAAAA        CCACC-GCCTCC CTGA GGATGCCGGTGG         TTTTGTTCATCTAAA  88 61
   CKO_03668 3411336 .. 3411352 + -10.9  -2.62616   TCGAACTCGCGACCC              CGACCTT GGC AAGGTCG              TGCTCTACCAACTGA  73 328
   CKO_03673 NONE
         psd NONE
   CKO_03675 3417926 .. 3417937 +  -7.2  -3.30124   GTAATAATGCCGGAT                GGCG GCTT CGCC                 TTATCCGGCCTACAG  61 44
   CKO_03678 NONE
   CKO_03679 NONE
   CKO_03680 NONE
   CKO_03681 3424316 .. 3424344 + -17.6  -5.95539   ACAATCTAAGCCATA        CGCCCTCTTATC TGCAC GATAAGAGGGCG        TTTTTTTATTTCCCC 100 32
   CKO_03682 NONE
   CKO_03684 3426136 .. 3426170 +  -5.6  -4.25056   TTACCGGAGCAAATC     AATTAACGGTACGACG CCA CGCCGTACCGTTCACA     TTTATTGCTGGGCTC  69 20
   CKO_03686 NONE
   CKO_03688 3428554 .. 3428567 +  -2.4  -3.87994   ACCTGATTAATAATT               GGTT AGGGAG AACC                TTTATGGCGATGAGT  53 192
   CKO_03689 NONE
   CKO_03690 3430052 .. 3430075 +    -8  -4.00066   TGACCAAAAGAAAAA          CCCCCGAACA TTTC TGCCCGGGGG           TTTCTAAATTCTGGG  71 525
   CKO_03694 3433737 .. 3433762 + -11.1  -2.91924   CGTCAGCATTCGTAG         GCCCGGTAAGCG TAG CGCC-ACCGGGC         ATTTATGCCGGATGG  74 26
        aspA 3436096 .. 3436115 + -13.6  -5.58179   GGTAGTAACACAGGA            GGCACGTC AGAT GACGTGCC             TTTTTTCTTGTCATA 100 49
   CKO_03697 3437498 .. 3437519 + -15.1  -4.20783   CTGTAAGTTCTCCTC           GCGGGGCGT ATAC GCGCCCCGC            TTTCTTACCTCCGCT 100 35
   CKO_03699 NONE
        dipZ NONE
   CKO_03701 3440459 .. 3440474 + -10.4  -5.42514   CACTATTTAAAGAAA              CCAGCC CGTA GGCTGG               TTTTTTGCTTTCTGG 100 230
   CKO_03703 3441842 .. 3441855 +  -2.3   -3.0281   AACTACAGCGATAGT               CCCGT CATT ACGGA                TATGTAATTCATCTA  42 464
   CKO_03705 3442714 .. 3442729 +    -9  -2.83012   TCTGAATAAAGCTAT              GTGCCA TGGA TGGCAC               TGTAATAGTCGCATT  65 69
   CKO_03706 NONE
   CKO_03707 3444762 .. 3444778 + -13.7  -3.35679   GACAGGGAAGCATTC              CGGGCCA GGA TGGCCCG              TTATCCATAACAGGA  90 52
   CKO_03708 3445333 .. 3445344 +  -4.4  -2.70932   CAAATCTGGTTCTCT                CTGA CCTA TCAG                 TAATTAGCCAGCAGG  45 11
   CKO_03710 NONE
   CKO_03711 NONE
   CKO_03712 3449336 .. 3449347 +    -3  -3.64703   AATGCCACAGCAACA                TTCA CGCT TGAA                 TTTCAGTAACCGGAG  49 5
   CKO_03713 3449865 .. 3449881 +  -2.1  -4.46212   GCGTCACCTATACCT              ACGCCTG AGT CAGGAGA              TTTTGTCATGAAAAA  61 18
   CKO_03714 3450819 .. 3450840 +  -5.1  -3.08679   GCTGGAGAAAACAAG           GGGGGAC TATATCCT GTCTCCC            TGTTCAATGGCGGCG  50 53
   CKO_03715 3452693 .. 3452707 +  -4.2  -3.05384   GCTTCTTAATTTCCT               GCGC AGACTGG GCGC               TTCGCTGCGCAAGAG  47 465
   CKO_03719 3459218 .. 3459229 +  -3.6  -3.93367   AACTAAATTATAAGC                GGGT TCTC GCCC                 TATTTTGTTCGCCAG  58 276
   CKO_03722 NONE
   CKO_03723 NONE
   CKO_03724 3462831 .. 3462846 + -10.4  -4.67353   ATCCGGCATTACTAC              CGGGCA TCCC TGCCCG               TTTTTAACTCAGTAC  93 3
   CKO_03728 3466609 .. 3466633 + -17.3  -3.22653   ACGATGAGAATAACG          CGAGAAGAACG TCG CGTTCTTCTCG          TCTTCTCAGAGTAAT 100 34
   CKO_03736 3477444 .. 3477459 +  -7.5  -4.87291   TAACGAGATAAAAAA              CCCGC CATTTT GCGGG               TTTTTACTTGCCGTA  91 62
   CKO_03737 3477850 .. 3477863 +  -3.1  -2.97382   GCCAGCACTTTTCAA               TTTCC TTAT GGAGA                GTTGTTATGTTACGC  43 81
   CKO_03739 NONE
   CKO_03740 3480912 .. 3480941 +    -2  -2.71364   GCGCTGATGCCAAAA       GGGCTGGCGG CATGAAAAAA CTGCTTGCCC        TGATTGCCGCCCTGC  39 11
   CKO_03741 NONE
   CKO_03742 3482722 .. 3482738 +  -2.9   -3.2511   ATTTTCCGCCGGGGA              GGTCAGT ATG GCTGAAC              GTTTTCTCGCTGACA  45 11
        hmuV 3483556 .. 3483567 +  -3.6  -3.74251   CCGGCAGACAATTCT                GCGG AGAA TCGC                 TTTCCTCAGGCTATA  54 73
   CKO_03744 3484650 .. 3484660 +  -5.4  -2.62983   ATCAGGGATAATACC                 CACA CAA TGTG                 TAATCTCAGGATCGC  49 108
   CKO_03745 NONE
   CKO_03746 3487039 .. 3487049 +  -6.8  -3.49475   GAAAAGAAGCCGCTT                 CGCA TTA TGCG                 TTATATAAAGGTAAC  60 40
   CKO_03748 3488970 .. 3489001 + -15.8  -2.91681   TCCTGTAACAGCACC      TTGCGTGCCGCCCG TTAT CGCGCGGCACGCCA       TCTATACAATTCAAA  93 33
   CKO_03749 NONE
   CKO_03750 3490823 .. 3490838 +  -6.2  -3.23979   CAGGTCGCCCCACAA              CCTTAA AAAC TTAAGG               TTGGCTTAATGTTGC  57 1
   CKO_03751 3492532 .. 3492543 +    -3  -2.93073   TGCAGGAGGCTAACT                GAAT GAAA ATTC                 TGATTGTTGAAGACG  42 20
   CKO_03752 3493231 .. 3493249 +  -4.5  -2.82635   GTTTTCTGCACAGAC             CGATGAC CCTTC GTCAGCG             TCTGATGCTGACCAT  46 54
   CKO_03753 3494620 .. 3494632 +  -3.4  -4.48072   TCCTCAATCTCCTGA                TCGA TATCT TCGA                TTTTCTGCTCGATAT  64 357
   CKO_03755 3496533 .. 3496547 +  -5.8  -4.43477   TGTGATGAAGATAAC               TAAAAC AGT GTTTTA               TTTTGATTGAATCAA  73 1
   CKO_03757 3498201 .. 3498224 +  -6.7  -3.02144   TAGGCTCCGGCGCGC          CAGCGGGTA AAAATC TGCTCGCTG           TGTTCGCCCGCCTGC  54 467
   CKO_03759 3501305 .. 3501330 +  -6.9  -2.93991   TTTTTCTTACCCTGG         CGGCAACCT TCAGCCAC AGGTTGTCG          TATCCTTAAATTGCG  57 188
   CKO_03762 3501801 .. 3501828 +  -4.8  -3.67877   CTGATTTTTCCAGGC        CCGGTAAGGCG TTTACGC CGCCAT-CCGG        TATTTATTGCCCGGT  59 37
   CKO_03764 3502362 .. 3502380 + -11.7  -2.66316   GACAGAGTAAACCGA             CGGGAGG CGCGC CCTCCCG             TGCTGTCATCGAAGC  76 31
   CKO_03765 NONE
   CKO_03766 NONE
   CKO_03767 NONE
   CKO_03768 NONE
   CKO_03769 NONE
        phnH 3506963 .. 3506977 +  -2.7  -2.84812   TGGCGATTCCGCGAA               CCACC CATGT GGAGG               TGTGCTGATGTACGT  42 3
   CKO_03771 NONE
   CKO_03772 NONE
        phnK 3509636 .. 3509658 +  -3.4  -3.59406   GGTGTCGTCGGTATT           GCAGAACTGA TTT TTTGTTTTGC           TGATTTTTTGTTTTG  51 16
   CKO_03774 3510430 .. 3510446 +  -5.1  -2.82623   CGGATCGTTTGCATC              TGATGGG AAC CACATCA              TGATTATCAACAACG  49 6
   CKO_03775 NONE
   CKO_03776 NONE
   CKO_03777 3512835 .. 3512860 +  -3.9  -3.96148   GCTGTTCCCCCTGCG         CTGGGG-CGTGG GCG CCGCGATTCCGG         TTTATGGTCCGCCGG  58 300
   CKO_03779 3513329 .. 3513370 + -12.3  -2.57881   TTGTACTGGAGTAGC CTTACGCCGGATGGCGGCGC ATT GCGCC-TTATCCGGCCTACG ATTGTCGCGCGGTTA  78 27
   CKO_03783 NONE
   CKO_03784 NONE
   CKO_03785 3517361 .. 3517377 +    -3  -3.81154   ATAAGCGTAGCGCCA             TCAG-GC AATG GCACTGA              TTTAGTCAATATTTT  52 105
   CKO_03786 NONE
   CKO_03787 NONE
   CKO_03788 NONE
   CKO_03789 3521617 .. 3521637 + -13.3  -2.57931   GCTGCCGTTTTCTGT            CGTCGCGGT GAT ATCGCGACG            CTTATCAGGCCTGCA  80 15
   CKO_03791 NONE
   CKO_03792 NONE
   CKO_03793 3526548 .. 3526606 +  -5.1  -3.29144   TGCATAGACAAACTT GCCGGATGGCGGCGCAGGCCTACCCGTTC GCA GGCCGGATAAG-C-GCAGCGCCATCAGGC TTATAACAACAATAC  52 34
   CKO_03794 NONE
   CKO_03796 NONE
   CKO_03797 NONE
   CKO_03798 3530277 .. 3530310 + -13.3  -3.53444   AGCCTGATGGCGCTA     CG-CTTATCAGGCCTA CAG TAGGCCGGATAAGGCG     TTTACGCCGCCATCC  90 47
   CKO_03800 NONE
   CKO_03803 3533616 .. 3533634 + -14.6  -5.64274   ACATTTTCCTTGCAA             CAGCCTCC GCC GGAGGCTG             TTTTTTTATCCATAC 100 130
   CKO_03804 3534404 .. 3534415 +  -7.2  -3.30124   ATATTGCCGGATGGC                GGCG CAAG CGCC                 TTATCCGGCCTACAG  61 46
   CKO_03806 3536448 .. 3536470 +  -5.6  -2.64595   CCCCGCAGGCGCAGC          GC-CTGCTG ATACGC CAGCAGAGC           ATTGTCATAGGCATT  46 459
   CKO_03813 3542871 .. 3542881 +    -4  -3.86653   TGTAACAAAAAACCA                 CATT AAA AATG                 TTGTCTTTAATCAAT  58 20
   CKO_03816 NONE
   CKO_03817 NONE
        actP 3547416 .. 3547431 +  -7.5   -2.7464   GCCCCATGTGATGCC              GCGCC AAACCC GGCGC               CTTTCGCCATCCCTT  55 201
   CKO_03821 3549384 .. 3549395 +  -7.2  -3.30124   CGCTCGCCGGATGGC                GGCG CAAG CGCC                 TTATCCGGCCTACGG  61 46
   CKO_03828 3555438 .. 3555469 +  -4.2  -3.02144   ATCGTCTGTAACTTT      ACTGCCCGCGCTGC ATCA GGAGTGCGGGCGAC       TGTTGCAGCCACTGA  47 30
   CKO_03830 3557892 .. 3557907 + -10.4  -5.60689   CTGATGCTGATATAA              GCCTCC GCCC GGAGGC               TTTTTTATTCTCTCA 100 37
   CKO_03831 NONE
   CKO_03832 NONE
   CKO_03833 3562001 .. 3562015 +  -5.6  -3.22274   GGTAAGCGCAGCGCC               ATCCGG CAG CCGGAG               TTGACTATGTTTGCT  54 105
        fecB NONE
        fecC NONE
        fecD NONE
        fecE 3565762 .. 3565775 +  -5.3  -4.56775   AAGTTATGTAAGGAA               CACTA TATT TAGTG                TTTTTCAACCCAGGT  72 159
   CKO_03839 3568827 .. 3568844 +  -8.4  -5.76949   ACCGCGAAGCAAAAA             GCCTCC CGTAGC GGAGGC              TTTTTTTTGCCGATG 100 51
        uvrA 3574245 .. 3574259 +  -4.2  -4.09685   GGCGCAGCAACTCCG               CCAGTT CAG GGCTGG               TTTTCAAAGATACCG  62 309
   CKO_03846 NONE
   CKO_03847 3579190 .. 3579200 +    -4  -3.02511   TCATCAGCGACAAAC                 CAAA GCC TTTG                 TGTTCGCCAAATGGC  45 389
   CKO_03856 3591918 .. 3591943 +  -3.1   -3.9281   CCGTTAAACGTCAGA         CGTACCGTACC GATT GGGCCGTTACG          TTGTTTACCAATAAT  56 103
   CKO_03859 3594352 .. 3594372 + -12.6  -5.12785   CGGGGAAAAGAATTA            GGGCTTCC ACATG GGAAGCCC            TTTCTTTTTTAGTTC 100 46
   CKO_03860 3595336 .. 3595351 +  -2.4  -4.41494   GCGCGGGTAATCCAG              CGGCGG GATC TCGCGG               TTTTCCTTCGGGCTA  62 463
   CKO_03867 3600777 .. 3600801 +  -5.7  -2.64651   TGATCACGCTTACCT          TCGATGACTGT CAT ATCGTCATCGG          TCAGTTTGCCCCATT  49 231
   CKO_03871 3602607 .. 3602623 + -10.1  -2.71681   AGCGCAGCGCCATCA              GGCGTTG TGC CAGCGCC              TGATTACAGCCATTC  68 81
   CKO_03874 3606383 .. 3606403 + -12.6  -5.40072   CAATATGTTATGTAG            GCCCGGTA AGCGC TACCGGGC            TTTTTTTCAACCAAC 100 90
        malE NONE
   CKO_03882 NONE
        malF NONE
        malG 3615885 .. 3615902 + -12.7  -5.80364   TTGTGACTGTTCTTC             GGCGCTC CTCG GAGCGCC              TTTTTTTATTCCCGT 100 108
   CKO_03886 3617357 .. 3617370 +  -8.1  -3.07487   ACGGCGTCCAGTAGG               CGGTC AAGT GACCG                GTTTTCACGCTGTAA  63 470
   CKO_03887 3619560 .. 3619575 + -11.8  -4.52589   AGCGTATTGATTGCG              GCGGCG TCAT CGCCGC               TTTTCTCTGCGCCAA  95 433
   CKO_03894 3624760 .. 3624777 +  -9.8  -5.28176   TAAATAATACCTATA             GCCGGG CTCGAA CCCGGC              TTTTTTATAACTAAA 100 56
   CKO_03895 3625810 .. 3625822 +  -2.6  -3.30124   TGCACGTCGCCGGAT                GGTG GCTAA CGCC                TTATCCGGCCTACAC  47 75
   CKO_03896 3626269 .. 3626280 +  -7.2  -3.29211   GGACGCTTAATGCCC                GCCG TTTT CGGC                 TTCGCTTTCGCCTTC  59 131
   CKO_03899 3627998 .. 3628047 +  -6.5  -3.53224   TGCCTGATGGCGCTA CG-CTTATCAGGCCTACAGGATAG TGC TTATAACGTAGGCCGGATAAGGCG TTTCACGCCGCCATC  61 71
   CKO_03901 3629863 .. 3629885 +    -9  -4.30719   AAAACAATAAAGAGA           CAGGGCGCCC GAT GAGCACCCTG           TTTGTTGTAAGGAAA  83 48
   CKO_03903 3634735 .. 3634758 + -11.8  -3.04263   CTGAAGCAAAACCGC          TGTTTGCGCC GATA GGCGTAAACA           TCTTCCACGTGCCCT  76 137
   CKO_03908 3641428 .. 3641447 + -13.6  -3.22878   GCATGAACGCAAAAA            GGCCATCC CTCA GGATGGCC             TCTTCACTTTAATTA  86 192
   CKO_03917 3652328 .. 3652347 +   -15  -5.68039   GTACTGAACGCAAAA            CGGCAGCC CTAA GGCTGCCG             TTTTTTTATCCATTT 100 45
   CKO_03918 3652943 .. 3652958 + -11.8   -5.4505   TGAGTGTATCGCCAA              CGCGCC TTCG GGCGCG               TTTTTTGTTGACAGG 100 51
        pheA 3654724 .. 3654738 +  -2.1  -3.65812   GACAGCGCCAGCAGT               TGTTC CAGCT GGACA               TTCTCTTCCGCCAGG  50 422
   CKO_03922 NONE
   CKO_03923 NONE
   CKO_03924 3659090 .. 3659100 +  -5.4  -3.19192   CAGGCCAAACATCAG                 CGTT CTG AACG                 TTCAATTAAATAACA  54 2
   CKO_03925 3660093 .. 3660110 +  -2.6  -4.63184   TGTTGCGCATCTTTG             GCCGGA CGAATC TCCAGC              TTTTTAGCATCAATT  65 509
   CKO_03934 3666195 .. 3666230 +  -6.2  -3.93658   TGGAACATATCTCCA    CTACCACGCTGATC-GT CAC ACTGATCATCATGGTGG    TTATTTCAGCCTATT  66 60
   CKO_03935 3667877 .. 3667899 +  -3.2  -4.35926   GCGCCTTTTCTACGT           CCAGCTCGGT ACG ACGGCGCAGG           TTTTCCATTTCCGCT  62 437
   CKO_03937 3669146 .. 3669157 +  -4.4  -2.94416   TACTGTATAAAAAAC                CAGT TTAT ACTG                 TATGTAATCACAGTC  47 58
   CKO_03938 NONE
   CKO_03939 3671370 .. 3671400 + -18.6  -3.61715   GATTGTTTTCTGGTG       TTAAAAAAGGTGCC ATT GGCACCTTTTTTAA       TTATTGACGAACCTG 100 41
   CKO_03942 NONE
   CKO_03944 3675178 .. 3675192 +  -2.8   -4.5442   ATAAATGTAATTCAT               TTGCTT TAT AAGCCA               TTTTATACTTCAACA  67 463
   CKO_03947 NONE
   CKO_03948 3680227 .. 3680252 +  -6.2  -3.14132   AGCTTAATAATATAA         CCAGTGAG GAAATATTAA CTCACTGG          TTACTACAAAGGAAA  57 42
   CKO_03949 NONE
   CKO_03950 3680924 .. 3680968 + -10.2  -5.00846   ACCCCATTAAATTAA GCAAGAGCTAACTCAGAGATGC TCC GCTTCTCTAAGTT-GC-CTTGC TTTTTCTGCTCTTTG 100 67
   CKO_03953 3681912 .. 3681925 +  -9.5  -4.67552   GAACTAATTTTACAT               GGGCC TTTT GGCCC                TTATTTTTTAATGAA  93 34
   CKO_03955 NONE
   CKO_03956 3684041 .. 3684057 +  -2.9  -3.86897   CTGCTTTACACAAAG              TCCTCAT GGT GTGCGGA              TTTGTAAAGGCTGCC  54 293
   CKO_03957 3684673 .. 3684686 +  -3.1  -3.87638   CTCTGATAATAGCAA               CACTA AATC TGGTG                TTCTTAATTAATTTG  54 1
   CKO_03958 3684997 .. 3685012 + -10.4  -4.50976   AATTATTAAAATAAA              GCTCCC TTTC GGGAGC               TTTTATAATCTAACA  93 49
   CKO_03966 NONE
   CKO_03967 3693537 .. 3693555 +  -3.8  -4.20516   ATTTATTGGGTTAAT             CGCTGGTA TCG TATCAGCA             TTTGTTAAATGGGGC  62 522
   CKO_03969 3694105 .. 3694123 +  -7.4  -5.22312   CTTAATGTGGTAAAA             TGGCGC AAACACA GCGCCA             TTTTTTAGTATCCAT  91 47
   CKO_03970 3694364 .. 3694376 +  -9.1  -2.53255   ATTTAAGCAGCCCAC                CGGCA CCT TGCCG                ATTAATACCTGTTGT  64 35
   CKO_03971 NONE
   CKO_03972 NONE
   CKO_03973 3696527 .. 3696555 + -12.4  -2.64616   CTGCTTTAACGATCT       GGCCGGGCG-ACG CTAT CGTACGCCAGGCC        TGCTCTGCATCAGGC  78 32
        mtnK 3699236 .. 3699247 +  -3.6   -4.2679   GTCGAGCTAATAAAG                CTGC CAGG GCGG                 TTTTCGTGCAGGTTA  64 363
   CKO_03977 3700374 .. 3700401 +  -7.6  -4.33582   AGGGAGCGCATTGTA        GGCCCGGTAAGCG CAG CGCC-ACCGGGCA        TTATTTATTCTTCGC  77 25
   CKO_03983 3706039 .. 3706060 +  -3.5  -4.84918   AGCGAAAAGCAAAAA           GCCCTCAGC ATAC GCCAGGGGC            TTTTCTATTTATCGC  71 42
   CKO_03995 3720405 .. 3720424 +    -5  -4.81551   TTACTCTTTATTTAT            CTTTTCGC TGGC GCGAAAAC             TTTTTCATGTAAATC  76 156
   CKO_03998 3723057 .. 3723070 +  -9.5   -5.7946   TGACATGAGAAAAAA               GCCGC TAAT GCGGC                TTTTTTTATTCCAGC 100 48
   CKO_04001 NONE
   CKO_04002 NONE
   CKO_04003 3728418 .. 3728431 +  -3.1  -3.53012   CGTATCCAGCCCCAC               CG-CCA GCG TGGACG               TTTCCCCGCGCAGCG  49 143
   CKO_04006 NONE
   CKO_04007 NONE
        gabD NONE
   CKO_04009 3735148 .. 3735165 +  -3.3   -3.4072   CGGATAAGGCGCTTA             CGCTGCC ATCC GGCAATG              TTGTGATGCCCGGTG  49 53
   CKO_04010 3736644 .. 3736689 +  -6.7  -3.04799   GCCGTTGCAAAATAC GCGTTAGACCTGTGTCCCGGC GCGC GCCGGGATATCAGCCCAATGC TATTCAGGAGTTGTA  55 19
   CKO_04011 3737605 .. 3737647 +  -3.5  -5.67283   GTTTTAACCTGATCT TCCACACTGCCGATCCCGGAA ATA TTCCCG-ATCG-CAATGAGGA TTTTTTCTTTCGCTT  91 231
   CKO_04013 3738600 .. 3738613 +  -9.5  -3.04122   AGAATCGCCGCAGTC               CCCGG CGGG CCGGG                TGGTTTGTACTGACC  70 52
   CKO_04016 NONE
   CKO_04017 3740055 .. 3740075 + -16.9  -3.50532   AGACCCGCTTTCTTC            GCGACTGGC AAG GCCAGTCGC            TTCGTTAGTTTGAAT 100 40
   CKO_04019 3740946 .. 3740958 +  -9.1  -3.28712   AATCTTGCCGGATGC                GACGC AGA GCGTC                TTATCCGGCCGACGG  68 46
   CKO_04021 3742867 .. 3742878 +  -7.2  -3.30124   CTATTGCCGGATGGC                GGCG TAAA CGCC                 TTATCCGGCCTACAC  61 46
   CKO_04022 NONE
        nrdI NONE
   CKO_04024 NONE
        nrdF 3746855 .. 3746890 +  -2.7   -3.6422   AATTTTTGACGGCGA    TTATCGCGGTAAATAT CGATC ACACTT-CCGCGATAA    TATTTTAACGGGATC  49 32
   CKO_04026 3747069 .. 3747081 +  -3.3  -3.65996   GGAAATCCCGGCAAA                TGGCC TCC GGCAA                TATTTGTGTCTGAGG  54 0
   CKO_04027 NONE
   CKO_04028 3749472 .. 3749485 +  -3.1  -3.34522   AAGTAATTCACCCGT               TGC-CC GGT GGCGCA               TTGCTTACCGGGTCT  47 35
        proX 3750711 .. 3750723 + -10.5  -3.30771   CCAATGCCGGATGGT                GGCGC GAT GCGCC                TTATCCGGCCTATAC  77 89
   CKO_04030 NONE
   CKO_04031 NONE
   CKO_04032 NONE
   CKO_04033 3753880 .. 3753903 + -11.8  -3.85698   AAGAAAAAACTGACA          GGCCAGCACGT CAT AC-TGCTGGCC          TTTCTGACAAAAACG  95 74
   CKO_04034 NONE
   CKO_04035 3756695 .. 3756715 + -14.1  -6.06723   CGCATTAATAAAAAA            GCCAGTTCA TGA TGAACTGGC            TTTTTTTTTGCCGGA 100 33
   CKO_04056 NONE
   CKO_04057 NONE
   CKO_04058 NONE
   CKO_04059 NONE
   CKO_04060 3774376 .. 3774416 +  -6.4  -3.36878   AACATGGGTAATTTC GTTGTG-AATGCTAATTGC TTGC GAAATTATCATTTCACAAC  TTATACATCAGTCAG  59 30
        srlR NONE
        gutQ 3776194 .. 3776221 +  -9.1  -2.98823   TTTCAGCCCCAGACG        CTTCGCCAGCC GATGCA GGTTGGCGACG         TCTGTCTCCAGCGCC  67 43
   CKO_04064 NONE
   CKO_04065 3780692 .. 3780708 +  -6.5  -6.60239   CCCCGACACGTTTCG              CCCCG CCAGTCC CGGGG              TTTTTTTTTATTTTT 100 259
   CKO_04070 NONE
   CKO_04071 3787971 .. 3787983 +  -4.7  -4.09685   AGTAACGGGGAAGAT                CTGGC GTA GCCCG                TTTTGCCGGGTGGCG  64 17
   CKO_04079 3795798 .. 3795814 +  -2.9   -4.2717   GGCGCACAGCTCATG              GCGTG ATGCAGA CGCGC              TTTTGATAAGGTGAT  62 315
        hypA 3796504 .. 3796517 +  -8.1  -3.28712   CCAACGCCGGATAGC               GACGC CTGA GCGTC                TTATCCGGCCGACAG  65 17
   CKO_04083 NONE
   CKO_04084 NONE
   CKO_04085 NONE
   CKO_04086 3800149 .. 3800165 + -13.7  -4.36914   TTATTTACCGTTTTC              GCACCGC ATC GCGGTGC              TTTTCTGGAAAAGCA 100 295
   CKO_04087 NONE
   CKO_04088 3802972 .. 3802993 +    -3  -4.72272   GCTGATAACAGTGTA          CCGGACACTG CTTA CAG-G-CCGG           TTTTTCCTCGCCAAA  70 263
   CKO_04090 NONE
   CKO_04091 NONE
   CKO_04092 NONE
   CKO_04093 NONE
   CKO_04095 3809545 .. 3809573 +  -7.5  -5.45652   CATCGCAATCCGTAG       GCCGGATAAGGCG CCAGC CGCC--ATCCGGC       TTTTTTATTAACGCT 100 86
   CKO_04099 3812512 .. 3812531 + -13.6  -5.41143   ACGGCCAAAGAAAAA            GGCCAGTC TCAC GACTGGCC             TTTTTTTGACGAATA 100 117
   CKO_04103 3814844 .. 3814859 +  -4.6  -3.03619   CCCTTTATAAAATAA              CCAGGA AAAA TCCGGG               TATTAAAGGATGCTT  47 26
   CKO_04114 3824178 .. 3824188 +  -8.2  -2.76696   CACTGGCAGATGTGC                 CCGG CTC CCGG                 ATTGTTCGCGGCGCA  62 456
   CKO_04115 3824905 .. 3824919 +  -4.2  -3.49232   CCAGCGACGCCAGAA               TTTCCG GCT CGGTAA               TGTTCTCTTTGAACA  52 116
   CKO_04118 3828508 .. 3828522 +  -3.5  -4.46615   GTAAATCTCATTATC              CGCGCG TCAA CGC-CG               TTTTAGTTAATGATA  65 121
   CKO_04120 NONE
   CKO_04121 NONE
   CKO_04122 NONE
   CKO_04123 3831289 .. 3831300 +  -5.8   -4.4009   GCCTGATAAGCATAG                TGCC ATCA GGCA                 TTTTGTAGCCTACAC  73 94
   CKO_04131 NONE
   CKO_04132 3840060 .. 3840072 +  -9.1  -4.09519   AGGTTTCAATGCACA                GACGC GTC GCGTC                TTCTTTCTGGCTGAT  80 249
   CKO_04139 3851511 .. 3851524 +  -8.1  -3.30124   GGGATGCCGGATGGC               GACGC TAGC GCGTC                TTATCCGGCCTACAG  67 43
        queF 3861053 .. 3861080 +    -7  -3.30441   ATCTTTTTTTCTCAA        TTTTGCGCGC CTGATTCC GCGCGCAAGG         TTGTGAAAGGTCATA  61 40
   CKO_04151 3862575 .. 3862600 +  -7.6  -5.30155   GTCCGCTTTCTCAGA        CCGGGTCTGGTG TTTT CACC-G-CCCGG         TTTTTTCATTGATAC  95 83
   CKO_04152 3864380 .. 3864399 + -12.8   -3.1876   CAGCTAAGTTTTGTA            GCGCCGCT TTCG GGCGGCGC             TTCCTCCCTGAGATT  81 34
   CKO_04154 NONE
   CKO_04155 NONE
         xni 3866705 .. 3866728 +   -11  -3.03124   GACGGGAACTTACAG          CAGCTACGGC TGAC GCGGTAGCTG           TGTTGCCGGGTGGCG  75 5
   CKO_04158 3868846 .. 3868879 +  -6.9  -4.12188   TATTATTTATCCAAA     CGGGCATTT-TCATAA TAT TTGTAACAAATGCCCG     TTTTCGCAGTAATAA  71 41
   CKO_04160 NONE
        fucI NONE
   CKO_04162 NONE
   CKO_04163 NONE
   CKO_04165 3874260 .. 3874278 +   -16  -3.17212   AATCTCTTGCCGGTG             CGCCCGCA TGA TGCGGGCG             TTCATCGAATGATGG 100 39
   CKO_04166 3875195 .. 3875212 +  -5.5  -3.18735   TCGTGATACAGCTGT             CGCGC CTGAATTT GCGCG              TTAATGCCGTGTTCA  52 193
   CKO_04174 NONE
   CKO_04175 3879963 .. 3879976 +  -8.1  -3.30124   AGCAAGCCGGATGAC               GACGC TGAT GCGTC                TTATCCGGCCTACAA  67 27
   CKO_04183 3885734 .. 3885747 +  -8.1  -3.34962   ATTTTGCCTGACGGC               GACGC TAAA GCGTC                TTATCGGGTCTACGG  67 44
   CKO_04201 NONE
   CKO_04202 3905931 .. 3905947 +    -3  -4.96028   CACCTGCCGCATTGC             GCGCCTA TAAT TA-GCGC              TTCTTTTTTTTGGCA  72 60
   CKO_04203 3906779 .. 3906791 +  -2.7  -3.19003   TGCTTTTATCAGACA                TAACT TCA GGTTA                TTACTAGACTATTAT  45 116
   CKO_04205 3907055 .. 3907086 +  -6.6  -4.81359   TCATTGAACGCTAAT      TGTTGAGGTCAGCA GCCC TGCTGGCCTTAGAA       TTTTCTCTTTCCCTT  80 27
         tas 3908533 .. 3908551 +  -6.6  -4.63486   TTCTGTACCGCAATC             GCGTTGCC CGC GCCGACGC             TTTTCTTGCCGCGCT  78 345
   CKO_04211 3913319 .. 3913329 +  -5.4  -3.15544   GAAACCGGGAATTCT                 TCGT CAA ACGA                 TTAATCAGGATAGCG  54 11
   CKO_04213 3914383 .. 3914394 +  -7.2  -3.30124   GGTTTGCCGGATGGC                GGCG CAAG CGCC                 TTATCCGGCCTACGA  61 42
   CKO_04215 3917115 .. 3917127 +  -4.7  -3.01831   TAGCGCGTCCCCAGT                AGCGC CAC GCGCG                TCATGTTTTTGCGCG  47 340
   CKO_04218 3917957 .. 3917980 + -16.8  -3.32844   CGCGTAAGCCATACG          CATCCGGCCT GCAC AGGCCGGATG           TTATCGCCTCACCGG 100 34
   CKO_04221 3920135 .. 3920145 +  -4.6  -3.59738   GTCGCCAGGCCCTTT                 CGCG CAT TGCG                 TTTAACCATCTCATG  52 266
   CKO_04224 3922805 .. 3922829 +  -7.1  -2.50935   GATAATGCTCTGTTT          AGCCGGAAC ATTCCCC GTTCCGGCG          CTTCCTGCCTGCCCT  55 39
   CKO_04225 3924176 .. 3924205 +  -5.5  -4.31412   AATCTCAATACAAAA       CGGCTCATCCACC TGAA GAGGGGCGAGCCG        TTTTACTCAGTCTTT  69 39
   CKO_04228 3926777 .. 3926799 +  -2.6  -4.53303   TAGCATTGAAGACAA           CAGTCGGG CACCGGT CCCGGCTA           TTTTATATAGGAATC  62 38
   CKO_04230 3928081 .. 3928105 + -10.8  -2.58892   GCCTTTTTCCACAAA         CGTGCAGCGAC CCAA GT-GCTGCACG          TCCGTTCATATCAAT  71 50
   CKO_04231 NONE
   CKO_04232 3928853 .. 3928866 +  -2.3  -4.49756   AAAACTGAGAAGGCG               CGTGC AGCA GCACA                TTTTCCTATTTCAAC  62 435
   CKO_04235 3929582 .. 3929601 + -10.7  -2.60496   CAGTAATTTAACCCA            GGCGGGA ATTTCG TCCCGCC             CTCTTTCGACCAGGG  71 35
   CKO_04236 NONE
   CKO_04237 NONE
   CKO_04238 NONE
   CKO_04239 3935028 .. 3935053 +  -3.9   -4.3898   CGGTAAAACGCATCA         GGCGCGGATAT CGTC ATACTCGCGCG          TTTTATCGAACTCAT  65 42
   CKO_04240 3935821 .. 3935839 +  -2.2  -3.34398   GGTGAAATCATTTTC             CCGCCTGT TGC GCCGGAGG             TATTTGCCGCAGCCA  45 387
   CKO_04244 NONE
   CKO_04245 NONE
   CKO_04246 NONE
   CKO_04247 3940682 .. 3940696 +  -8.6  -2.84794   TCGAACCCTCGTATA               GAGCTT GGG AAGCTC               TCGTTCTACCATTGA  62 155
   CKO_04250 3942556 .. 3942567 +  -3.6  -3.96618   GTAGAACATCGCTTC                GTCG TCAC CGGC                 TTCTTTCGCGTTAAC  58 287
   CKO_04253 3945012 .. 3945026 +  -2.8  -4.87892   TTTACCGGGTTAATT               TCAAAC ATG GTCTGA               TTTCTTTTATTGGAC  69 79
   CKO_04257 3949167 .. 3949193 +  -2.1  -3.37612   GCGCACCGAACCGTA         GGCCTTAAAGC TGCGC GCCATCAGGCC         TTCGTTGGCGTTACC  45 86
   CKO_04260 3951314 .. 3951331 +  -4.8  -3.30243   CCGCCCAGCACAAAC             CCGTGC CAGATT GCATGG              TTATAGGGAATGCGT  49 244
   CKO_04264 NONE
   CKO_04265 3954868 .. 3954915 +  -3.6  -3.67597   CAGGAGCAGAACAGG TTAC-GGTCG-CCGT-AAACGTC ATCAA GGCGTTTCACGGTCGGCCAGTAC TTGTTCGCTACCCCC  53 176
   CKO_04267 3957967 .. 3957981 +  -3.5  -3.76968   CGGTTGCATCCAGCA               GCGAG TCGAT TTCGC               TTTCGTCGCTGGCTT  56 126
   CKO_04270 3960125 .. 3960135 +  -3.2  -3.78597   ATGTCTTTGCCCTGG                 CGTT GCA GACG                 TTTGAGTTCATCGAT  54 404
   CKO_04275 3965036 .. 3965056 +  -3.9  -3.35679   GGGTTACAGCCTGCG            GCGGCATCT CGG AGATTCCCC            TTCTACCTGGCGACA  49 232
   CKO_04277 3965943 .. 3965961 +  -2.3  -3.17361   AAATCTGGTTAAGCG             CGGTCAG CACGC CTGGACG             ATTTTCATGGATGTG  43 291
   CKO_04281 3969002 .. 3969044 + -12.9  -3.53444   TGCCTGATGACGCTA CG-CTTATCAGGCCTACAGG TTAT TTTGTAGGCCGGATAAGGCG TTTACGCCGCCATCC  90 48
   CKO_04284 3970839 .. 3970871 +  -2.5    -3.794   GTCCATCTGCGGATA      CGGGAAGCTGATGCC TGC GGCATCGAACTCACG      TTTAATGCGTTCCAG  52 48
   CKO_04292 NONE
   CKO_04293 3979104 .. 3979123 + -12.2  -4.62069   ATCCGGCAAAAAAAA            TGGCTTCC CGAA GGAAGCCA             TTTTTACAATCAGCA 100 117
   CKO_04294 3980567 .. 3980582 +  -5.4  -4.24123   AACACGCCAACCGGG              CCGTTC CACA GAATGG               TTTTCGCATTCTTCA  69 270
   CKO_04298 3983416 .. 3983430 +  -5.6  -4.08216   AGTAAGAGGTTTTCT               ATGGCG CGT CGCCAG               TTTTCCAGCCAGTCC  66 51
   CKO_04299 NONE
   CKO_04300 NONE
   CKO_04301 NONE
   CKO_04302 3986248 .. 3986264 + -10.8  -3.28712   AATACTGCCGTAGCT              CGCGCC AGGAC GGCGCG              TTATACAACAGCCAG  74 206
   CKO_04310 3994941 .. 3994956 + -10.4  -3.15579   AAAACGCGCCCTGAA              CCCGCA TCCA TGCGGG               TTCCTCCGGCCTTAC  69 248
   CKO_04313 3997347 .. 3997357 +  -6.8  -3.90097   GGCAGGCATCCAGCA                 CGGT GAA ACCG                 TTGTCTTTATCAAAT  65 394
   CKO_04317 4002114 .. 4002132 + -11.7  -4.84918   CGTTGCTTTTTTTAA             GGCCAGC CTCGT GCTGGCC             TTTTGTATTTGTGCG 100 49
   CKO_04318 NONE
   CKO_04319 4004616 .. 4004660 +  -2.9  -3.50051   TACAAGAACAACTTT CGCTACGTTGCGGGCTC-GT TTTGAC ACGGAGTTCGTGATGTACCG TAATTTTTCTTTTGC  49 83
   CKO_04320 NONE
   CKO_04321 NONE
   CKO_04322 4007147 .. 4007160 +  -8.1  -3.30124   TAGTTGCCGGATGAC               GACGC CTTC GCGTC                TTATCCGGCCTGGAA  67 43
   CKO_04323 NONE
   CKO_04324 4008719 .. 4008729 +  -8.2  -2.89564   CTCTACCGCCTGTGC                 CGCG CCG CGCG                 TATGTAGCGTCGCCA  62 459
   CKO_04327 NONE
   CKO_04328 NONE
   CKO_04329 NONE
   CKO_04330 NONE
   CKO_04331 4012875 .. 4012889 +  -6.4  -4.08485   ATTAAACATCGTCTG               GATCTG TTG CGGATC               TTTGGTTTGCGTCAG  69 168
   CKO_04336 4017095 .. 4017106 +  -7.2  -3.53091   TACAGCAGTTACGTA                CCGG CGCG CCGG                 TTTGAGCACCCCGGT  63 9
   CKO_04337 NONE
        mltC 4018754 .. 4018765 +  -5.8  -4.11751   ACATCATATTGCAAC                GGCA AATG TGCC                 TTTTAAAACATTCAT  66 184
   CKO_04339 4020445 .. 4020456 +  -3.6  -4.62904   AGGCAGGCTCTCTTT                GCGG AACA TCGC                 TTTTTGCAGATCTTT  69 407
   CKO_04342 4023382 .. 4023394 +  -6.2  -5.08824   GATGCCGCTTTCCGC                CGCG TGGAC CGCG                TTTTTTGCCTGAAAA  83 1
   CKO_04344 4024561 .. 4024577 +  -2.1  -3.55622   GTCGATATAAGCCGA              CTGCATC TGA GAAGCCG              TTTGCGGGAGTTACA  47 295
   CKO_04348 4026508 .. 4026539 +  -4.4  -2.98842   AATTAACACCTTCAC      TTCGCCTGCCGCCAA TAA TTTGTGGC-GGCAAA      ATTTCCTGTTCTCTG  47 39
   CKO_04349 4027230 .. 4027252 + -13.4  -5.03994   ATCCCTTTGCTATAT           CGCCAGGTAC CCA GCACCTGGCG           TTTTTGTATATACCG 100 513
   CKO_04357 4030341 .. 4030368 + -11.4  -3.87149   TTAAGTCTTAACCTA        CAGCACTCTTGCT AAA GGCA-GAGTGCTG        TTTCGATTTCGTCCA  87 37
   CKO_04358 NONE
   CKO_04359 NONE
   CKO_04360 NONE
   CKO_04361 NONE
   CKO_04362 4034999 .. 4035009 +  -3.2  -3.22618   TTCCATTTGCGAGAG                 TGCT GTT GGCA                 TGTGTTATATCGACG  45 319
   CKO_04367 NONE
   CKO_04368 4042465 .. 4042488 +  -2.4    -4.652   TCGTTAATTAAACCT          GGGATATTTC CTAA GAAAAATCCA           TTTTTACCGTCATTT  63 144
   CKO_04369 4043411 .. 4043423 +  -3.5  -3.19371   AAAGCATCAGTATAT                TATTT CTT AAATA                TTAACTTAACTAACT  47 61
   CKO_04370 4043986 .. 4044004 +  -8.9   -2.5185   AGGGCCCTTCGCGGC             CCTGAGT AATTC ACTCAGG             ATCTCTTCATGTTTC  64 45
   CKO_04371 4044690 .. 4044701 +  -2.2  -2.70138   TAAATTTAAAATGTA                GGTT ACAA AGCC                 ATGTTTCATGTCAAT  39 25
   CKO_04372 NONE
   CKO_04373 4048631 .. 4048644 +  -2.3  -3.54029   CTCTGACGCTGAGGA               GGACT GATC AGCCC                TTCTGCTTCGTAAAA  47 422
   CKO_04375 4049782 .. 4049793 +  -3.6  -2.56046   TTAGCAAAAAAAGGG                GTCG CGGG CGGC                 TGCATTCCAGTTTAA  42 75
   CKO_04376 4050822 .. 4050858 +  -8.8  -3.35992   TACCGCGCTGATACA    CGCATATCGGACCG CAAAACAGC CGATCCGATATGTG    TTGCTTACCGTCAGT  70 30
   CKO_04381 4057536 .. 4057547 +  -7.2  -3.69702   ATGAGATTTTAACGT                CGCC ATCA GGCG                 TTATATTGCCTGATG  66 54
   CKO_04393 4068562 .. 4068576 +  -2.1  -2.91383   CGTAGGCAGGCCAGC               CTTCA TTAAT TGAGG               TATCTAACTCGGCGT  40 253
   CKO_04396 4070947 .. 4070959 +  -4.8  -4.26351   CTGGATTAGACGCCT                CAGC AGAGC GCTG                TTTATTAAATTCGTG  66 499
   CKO_04398 4071530 .. 4071546 +  -3.7  -2.62263   ACTCTCCCGTTTTTT              ATTCTCT GGA AGAGAAA              TAATATGAAAGACGT  43 6
   CKO_04399 4072047 .. 4072076 + -13.5    -3.052   ATCAGGCAATAAAAA       AGCCGGGTACGGC TTGC GCCCTACCCGGCC        TGTCTGTCTGCCCAT  82 99
   CKO_04402 4074745 .. 4074760 +  -3.2  -4.20516   ATTGCAGACACTCCG              GGCAGA AAAG TCTGCA               TTTGTTGCGTCCGGG  60 61
   CKO_04403 4075647 .. 4075673 +  -5.8  -3.75169   CGACGCGCTCTCGTA        GCCAACG-CGC ATCGCA GCGGCGCTGGC         TTTCATCCCGTCGTG  60 172
   CKO_04405 NONE
   CKO_04406 4077789 .. 4077805 +  -2.1  -3.63817   CAGCCGTCGGATTTA              CGAAGCG GCT CGCTAAG              GTTTTTTCGCCTCTG  47 10
        dkgA 4078748 .. 4078767 + -13.6  -4.67353   TAACCTTCCTTTCCG            GCCCGACA TTTC TGTCGGGC             TTTTTGACTACCTGG 100 38
   CKO_04408 4079424 .. 4079434 +  -8.2  -2.93723   CGTCTGACGCTGATG                 CGCC ACT GGCG                 TATGCTTAGTCAACG  59 140
   CKO_04414 NONE
   CKO_04415 4089065 .. 4089084 +    -5  -4.39386   GAGATTATTGCGCGA            TGAGCAAA AGAC TTTGCACA             TTTTGCTCATTTCGC  70 45
   CKO_04416 NONE
   CKO_04417 4090089 .. 4090112 +    -3  -3.30124   GCGTTTAAGTTTTGC          GCTAAATGCC GGAT GGCGCTTCGC           TTATCCGGCCTACAG  47 33
   CKO_04421 4095577 .. 4095625 + -13.1  -3.10641   ACGCCGGATGACGCT TCGCTTATCCGGCCTACGGGCAC AAT GCGAGCGTAGGCCGGATAAGGCA TTCAATGGTCGATTA  82 40
        tolC 4101762 .. 4101792 +  -3.9  -3.49475   ACCTGATTCCAGGCA      GGGTAAGCGTCGCG CCAC CG-GGCGCTAAACC       TTGTCTGAACGTAAG  51 75
   CKO_04429 NONE
   CKO_04430 4104112 .. 4104130 +    -8  -3.29461   CGTATTCTCGCCATG             CCAGCGCG CCG TGCGCAGG             TTATGCACCACGTTG  62 375
   CKO_04432 4105964 .. 4105987 + -12.4   -5.2291   TGTAAACACAAAAAA          CCGAAGCCTG CGAA CCGGCTTCGG           TTTTTATTATCATCT 100 438
   CKO_04435 4107440 .. 4107463 + -12.4    -3.741   GCAAGAGTAAAAACC          ACAACGGGCC GTAA GGCCCGTTGA           TATTTTCAGTGTTCG  93 31
   CKO_04436 4108122 .. 4108134 +  -9.1  -3.59627   CCAGCGGATTCACAG                GGCGA GTT TCGCC                TTTCAGACGTTTGGT  68 423
   CKO_04443 NONE
         cca 4115996 .. 4116009 +  -3.8  -2.57931   TCACCGTTTTGTTGC               CGGA TGGCGC TCCG                CTTATCCGGCCTACA  42 43
   CKO_04449 4118299 .. 4118311 +  -9.1  -3.30124   GCATCGCCGGATGGC                GACGC AAA GCGTC                TTATCCGGCCTACAG  70 95
   CKO_04451 4120374 .. 4120384 +  -2.4  -3.29144   AAAACCTGTCCCACA                 CCCG GAG CGCG                 TTATGAAAAAGATCC  43 9
   CKO_04452 4120999 .. 4121021 + -13.4  -4.37886   ATCAAATAACCCTCC           TGGAGAGGCG CTG CGCCTCTCCC           TTTTCTCAGGGATAC 100 32
   CKO_04453 4122513 .. 4122533 +  -8.2  -5.09225   GCTGTAAACCTCGTT            GGGGCGGC ATGAC GTCGCCTC            TTTTTTCCATAAGCT  91 34
   CKO_04454 NONE
        ureA NONE
        ureB NONE
        ureC NONE
        ureE NONE
   CKO_04459 NONE
   CKO_04460 4127985 .. 4128014 +  -6.5  -4.07568   TCTGTTCATCATCAC       CGTT-GCTGCGGAT CGT GTTTGCAGCGAACG       TTTTCAGCCCGGAGA  70 450
        rpsU 4129162 .. 4129188 + -10.9  -4.40882   AGTTGTAGTTGTAAG        GCCGTGC-TTCC GAAA GGAATGCGCGGC         TTATTTTCGTTTATG  95 74
   CKO_04464 NONE
        dnaG NONE
   CKO_04466 4133119 .. 4133136 + -12.7  -5.43866   CCGCATAAGCATCAA             CGCCACC GCAA GGTGGCG              TTTTTTTACCGCTTA 100 46
   CKO_04474 NONE
   CKO_04477 NONE
   CKO_04479 4140859 .. 4140877 +  -3.1  -3.74251   CCCACCGATGGTGAG            CGTGTCGC CTTC GCGA-GCG             TTTACTGCCCATGTG  51 490
   CKO_04481 4141583 .. 4141602 +  -5.7  -2.84015   CCAGCGCTTTTTTGG            CCACGGCG AACTA CGCC-TGG            TGATTCTGGAAATTT  50 3
   CKO_04483 4142168 .. 4142183 +  -4.6  -3.51708   CGTGGTGGCGTCAAT              CAGCCC AATC GCGCTG               TTGATTTGCGAAATC  52 163
   CKO_04486 4147404 .. 4147423 +  -5.8  -3.69395   ATTCCCCTTTTCCCT            TTTACGCCG CGA CGGC-TAAA            TTATTAACTCATCCG  61 178
   CKO_04487 4149842 .. 4149855 +  -5.2  -3.75024   AGCGGAAAGGTTCCA               CGCC GGACAA GGCG                TTGTTAATCATAAAC  58 374
   CKO_04489 NONE
   CKO_04490 4152642 .. 4152667 + -13.3  -6.06529   GCATATAAAAAGCAG         CGGCTGACGTC TTTC GACGTTGGCCG          TTTTTTTTATGTGTA 100 300
   CKO_04491 4153836 .. 4153846 +    -4  -3.09516   TTATACTCACTCAGG                 CAAA CAC TTTG                 TTACATCCTGAAAGA  47 200
   CKO_04492 4155218 .. 4155250 +  -2.6  -4.88407   CGACTCCCACTCGTA     GGCCGGAT-AAGACG TTTA CGTCGCCATCCGGCA      TTTTTCGTTGCCTGA  69 83
   CKO_04495 4160160 .. 4160180 + -16.9  -4.58395   GTTTACTCATTCAAA            GCCGCCTGT TAA ACAGGCGGC            TTTTTCAACGGTACA 100 67
   CKO_04496 4161055 .. 4161070 +  -7.5  -2.87132   AATCTTACGCTGGCA              GGCGC ATCAGG GCGCC               TGTCTGCGACGCCGC  59 43
   CKO_04497 NONE
   CKO_04498 4162503 .. 4162521 + -11.7  -2.53822   GACTATGATTAATAA             GGCGGAC TTATT GTCCGCC             GTGTTATGACCTGGA  76 92
   CKO_04499 NONE
   CKO_04500 4163286 .. 4163298 +  -4.1  -2.58758   TGCTGGGCGTACTGC                TGACG CGT CGTTA                ATTATGGCGGATTCT  45 12
   CKO_04501 NONE
   CKO_04502 4164025 .. 4164048 +  -6.6   -3.3514   CCTCCTCGCCATCCG          GCATAACGCC CGAT GGCGCTACGC           TTATCGGGTCTACGT  59 54
   CKO_04503 4164690 .. 4164708 +   -11  -4.84527   TACTGAATCAAAAAA             CGAGGGGA TAT TCTCCTCG             TTTTTGCTATCTGGA 100 49
   CKO_04504 4165724 .. 4165734 +  -6.8  -3.53012   CCGCTTTGCAAAAGC                 GGGA TAA TCCC                 TTTACGCCGCCACCA  63 19
   CKO_04505 4166332 .. 4166343 +  -3.6  -3.54475   CCATCCGGCTAAACC                GGGC TTGC GCTC                 TTATCTGCTGGCAAA  51 103
   CKO_04507 NONE
   CKO_04508 4168226 .. 4168249 + -16.8  -2.72344   TTAGCGGAAGAAGAT          GAAGCCGCCT GAAA AGGCGGCTTC           TGATTACCGATAAAC  95 14
   CKO_04524 NONE
   CKO_04527 4186563 .. 4186593 + -19.8  -4.11692   CCTGATGACGAAAAA       GGCCGGATGGGGAT CGC ATCACCATCCGGCC       TTTTACAGATAACTG 100 36
   CKO_04530 NONE
   CKO_04531 NONE
   CKO_04532 NONE
   CKO_04533 NONE
   CKO_04534 NONE
   CKO_04535 4192720 .. 4192745 + -10.5  -5.12987   ATTCTCTGTCATATT         GGCCTTA-GACG TAA CGTCATGAGGCC         TTTCTTTTTCTTTCG 100 48
   CKO_04536 NONE
        kbaY 4195088 .. 4195111 +  -6.8  -3.43203   TTCGCAATTTCAAAA          GGTCATGA TTAATTCC TCATGACC           TTCATATTATACTGA  61 86
   CKO_04538 NONE
   CKO_04539 4197918 .. 4197944 + -11.7  -4.24948   TAATCCCTGTAAAAA         CAGTGTTATCC CCACC GGGTAACACTG         TTTTCCCTCTGATGC  95 38
   CKO_04541 NONE
   CKO_04542 NONE
   CKO_04543 NONE
   CKO_04544 4202542 .. 4202553 +  -7.2  -3.30124   CCGTTTTAGCCGGAT                GGCG GCTT CGCC                 TTATCCGGCCTACAG  61 45
   CKO_04546 4204078 .. 4204090 +  -6.2  -3.20617   GCGCGGCCATTGCTG                GGCG ATTAA CGCC                TCTTCCATTTCACCT  54 264
   CKO_04549 NONE
   CKO_04550 4206077 .. 4206087 +  -5.4  -3.69354   GCCTCAGCGTTCTGA                 CTGA CAA TCAG                 TTTGCCGTTCTCAAC  61 26
   CKO_04553 NONE
   CKO_04554 NONE
   CKO_04555 4208617 .. 4208633 +  -3.1  -2.70932   CAACGGTAATCAAAT              TTTAATG CAG TATTAAA              TGATTCACCGACGAC  41 21
   CKO_04557 4210021 .. 4210031 +  -2.4  -4.07568   CGGCGGCAGGAAAGT                 CAGC AGC GCAG                 TTTTGAAGCGCCCCA  56 377
   CKO_04560 4216715 .. 4216736 +  -2.9  -5.34555   AAACCATGCGCAGCA           GACCACGAC GGCT GTGGTGATC            TTTTTTGTGCTCTGC  84 358
   CKO_04568 4222659 .. 4222679 +  -2.6  -4.40357   CGATCGATTTGTACG            CGAACA TCGATCTCT TGTTCG            TATTTTTTCTTCGTT  62 75
   CKO_04573 NONE
   CKO_04574 4225271 .. 4225286 + -11.8  -5.24531   CGGACAACGATTAAA              GGCCGC GTAA GCGGCC               TTTTTTGTGGGCGGT 100 46
   CKO_04581 4231557 .. 4231571 + -12.8  -5.13137   TCTTCGTTGATAAAA               GGCCGC ATA GCGGCC               TTTTTCCTTTCTTTA 100 118
   CKO_04583 NONE
   CKO_04584 4234197 .. 4234210 +  -3.8  -5.10208   CAGCCCAGCGCCTGC               GCGA TAGCTT TCGC                TTTTTCTTCCGCTTC  77 280
   CKO_04586 4235318 .. 4235334 +  -3.6  -3.06915   CGTAAACAGCGGAGT              GAGCGT GATTA ACGCAC              TTACCTGCGCTGCCT  45 163
   CKO_04590 4238005 .. 4238029 + -16.5   -2.6732   GTTAACCCTCCCTTC          TCATCCCGTGC TCT GCGCGGGATGA          ATCTTTAAGTTCCAG  95 36
   CKO_04591 4238765 .. 4238784 +  -7.8  -3.31196   CGGAGAGTTTTTCAA            CGCCGTGG CAAA TCACGGTG             TTGCTCTCGATTTCC  59 288
   CKO_04599 NONE
   CKO_04600 NONE
   CKO_04601 NONE
   CKO_04602 NONE
   CKO_04603 NONE
   CKO_04604 NONE
   CKO_04605 4249481 .. 4249495 +  -2.8  -2.71712   ATTCCGCCGTCCAAT               CAGC GCAAACA GCTG               GTTTGAACCAACCGA  41 5
   CKO_04606 4249839 .. 4249865 + -15.2  -3.92522   TTAGCGAGTGCAGGA         CGGCCTGTTGTG ACG CACAACAGGCCA         TTTGTACAGTTAGCG 100 53
   CKO_04607 NONE
   CKO_04608 NONE
   CKO_04609 4251626 .. 4251637 +  -7.2  -6.11243   CTTTCCCCCAGAAAA                CGCC ACCC GGCG                 TTTTTTTTATTCCCT 100 63
   CKO_04610 4252509 .. 4252544 +  -7.4  -3.27704   ATTTGACGCAAAATC    CACGCCTGACGGCTAC GCAC GTAGCCTGAAGGCGCG     TTCGCTTTAAAGCGT  59 64
   CKO_04617 NONE
   CKO_04618 4257996 .. 4258014 + -11.8  -2.71918   GCTGGAAGCTTTCTG             GATGAGCA GCC TGCTCATC             ATATTTATGCAGTAA  72 341
        gltB NONE
        gltD 4264089 .. 4264130 + -15.2  -2.77876   GAAGTGTAATACTTC TGGCTCCCCTGCCA-CAGC CTGAC GCTGATGGATGGGGAGCCA ATATTTCTCTGCTAA  93 32
   CKO_04623 4265480 .. 4265502 +   -12  -3.74902   ATATAAAACGTTACA           CCGGATGGCT ATA AACCATCCGG           TATTTTCATGCCTCT  93 128
   CKO_04627 4269607 .. 4269627 +  -6.7  -3.35849   GTTTCAGCGCGCCAA            CGCCGGGCA GCG TGACCAGCG            TGTTGATTTGATCCA  58 456
   CKO_04637 NONE
   CKO_04638 NONE
   CKO_04639 4276991 .. 4277020 + -12.9  -3.11192   TTAAGTCATCGTTAA       CCGGACATCAGCCC CGC GTGC-GATGTCCGG       TTAACTCGTGGTATG  82 37
   CKO_04640 4278152 .. 4278167 + -10.4  -5.25893   AACGTAATAAAAAAA              CCGGAG TCAT CTCCGG               TTTTTTACTGTGTCT 100 39
   CKO_04642 4280243 .. 4280259 +  -5.9  -2.52464   TTAACCGTCAAAAAT              CATTTAC ATG GTGAATG              TGCATTGGAAAAAAC  49 137
   CKO_04643 4280404 .. 4280415 +  -2.2  -3.27029   CAATAACCCATGAAA                CCAT TAGC GTGG                 TATTAATTAATCGCG  43 45
   CKO_04644 4280799 .. 4280817 + -13.1  -5.59879   CTAGTCCGACGACTT             GCCCCCG ACTGC CGGGGGC             TTTTTTATGTTTGTC 100 52
   CKO_04649 4285945 .. 4285958 +  -5.3  -4.07885   TGTTATCTATAATAT               GTGAT CTAA ATCAC                TTTTAAGCCAGAGTG  64 70
   CKO_04651 4287071 .. 4287083 +  -9.1  -2.94232   TGGCCCACGCCTACC                GGCAG ACT CTGCC                CTTCTTTACCGCAGA  62 189
   CKO_04661 4300649 .. 4300684 + -11.9  -2.62983   TCGCGTTAACGTTTC    GCCTCCGTCATGCTT AAAAAA ACGCATGACGGAGGA     TGCTATGAAAATGAA  76 63
   CKO_04662 NONE
   CKO_04663 NONE
   CKO_04664 NONE
   CKO_04665 NONE
   CKO_04666 NONE
   CKO_04667 4304867 .. 4304892 + -11.9  -5.47218   AGCGTGCGTTAATTG         AAAAAGGCCGG TTTT CCGGCCTTTTG          TTTTTTTCCCTCCGG 100 40
   CKO_04668 NONE
        panF NONE
        prmA 4307548 .. 4307569 + -13.7  -4.58283   TAATCAGTCCTTTCC           GGCGTGGTC ATCT GGCCACGCC            TTTTTCACACGATTC 100 38
   CKO_04671 4308478 .. 4308504 + -13.2  -3.21593   CACACTATGAAACGA         TAATCTGCTGGT TAA ATCAGCAGATTA         TGTTGTCCAGCCGTC  83 50
   CKO_04672 NONE
         fis 4310061 .. 4310086 +  -8.2  -5.46657   TTGCTTGTTTAAAAA         GGCGCTACTC GGCATG GGGAAGCGCC          TTTTTTATTCGCGTC 100 55
   CKO_04674 4311028 .. 4311041 +  -3.8  -3.18366   AGTCTGCTTTTCTGC               CACG TTGTTT CGTG                TATATTCCTTGCACG  47 51
   CKO_04675 4311313 .. 4311323 +  -3.2  -3.85209   ACCGTTACGCTTCCC                 CGAC CGG GTTG                 TTATTCTGCGTTAAT  54 89
   CKO_04677 NONE
   CKO_04678 4316667 .. 4316682 + -11.8  -4.58663   AACCACTAAAATTAC              GGCGCC CTCG GGCGCC               TTTTTCCAAAATAAT 100 39
   CKO_04679 4317157 .. 4317172 + -11.8  -4.34402   TAGGTTTTATTAAAA              GCGCGG CAAC CCGCGC               TTTTAATATAAGACA  95 38
   CKO_04680 NONE
   CKO_04681 4318631 .. 4318650 +  -2.8  -3.50853   TAACGGGCGCCGCAC            CTGTGGCGC TCA GC-CCAGAG            TTATGGTTACCGAGG  49 53
   CKO_04682 NONE
   CKO_04683 4320959 .. 4320969 +  -2.4  -3.22113   AACACCGGGCGTACG                 CCGC ACT GAGG                 ATTTTATGAGCCAAT  43 17
   CKO_04684 4321825 .. 4321848 + -13.8  -3.26998   CGCGTAAACGCAAAA          AGGCCCGGTC TTTC GACCGGGCCC           TTCGCTTGATTTGAT  86 117
   CKO_04691 4328218 .. 4328258 + -13.3  -3.20723   AAAGTCTGCCAACCA  CCGTTCTGGCGTATCGC CGCCAAA GCGATGCGCCAGCGTGG  TTCCCTTGATAGCAC  87 106
         def 4332606 .. 4332628 + -17.8   -3.7511   GTACACCTGACTTTG           CAGCGCGTCA TCT TGACGCGCTG           TTGTCTTCTGGACAC 100 86
   CKO_04700 4333524 .. 4333542 + -10.2  -5.61881   GGTCACGTCTTACTA             CGCCCGGT GTT ACCGGGCA             TTTTTATTTTTGCGG 100 42
   CKO_04701 4334866 .. 4334880 +  -3.6  -3.28712   ATAACGGGTCGCGAC               TGATGA AAA TTATCA               TTCTGGGCGCAGGGC  47 45
        trkA 4336251 .. 4336269 + -11.7   -3.5486   TTCCTGTAATTATTT             GGGCGCT AATGC AGCGCCC             TCTTTAATTCCCCTG  86 32
        mscL 4336955 .. 4336973 +  -3.1  -3.88029   AAGCGGATCGTGCAG             TAATGCC TCAAT GGCGTTG             TCTTTTATCTGCCCT  54 184
   CKO_04731 4350247 .. 4350263 +  -4.4  -4.12198   CATGTCTTTCAGTTT              CTGAGC CAGCA GCTTAG              TTTTAGGCGCTTCTA  62 468
   CKO_04736 4351728 .. 4351744 +  -9.4  -2.80344   AACCGTTCTTACGTA              GCTCCC CGATT GGGAGC              ATTGTTAGATAACCA  65 468
   CKO_04741 4352775 .. 4352799 +  -4.4  -4.10953   CCTCAAGAAATAAAA         TACGCTCGATA TATT TATC-AGCGTG          TTTCATTTCATCGAT  62 315
   CKO_04754 4361167 .. 4361181 + -11.4  -5.24531   TGAGACGTAAAAAAA               GCGGGA TAT TCCCGC               TTTTTTGTGCCGGAT 100 38
   CKO_04755 4362331 .. 4362345 +  -5.6  -2.64933   CGACGGAAATGCAGT               TGCGCA CGC TGCGCC               TGGTGTGGGTGCATC  46 490
   CKO_04760 NONE
   CKO_04761 4367966 .. 4367986 + -10.4  -3.73968   GCAGTGCGACGGCAC            GCTCACCG CCAGA CGGTGGGC            TTTACTCGCGCCTTT  76 497
   CKO_04771 NONE
   CKO_04772 4376148 .. 4376167 +  -3.4  -2.80575   ACAGTTTCGCGAATA            ATCCGCCG CTGA CGGCCGAC             TATACTAAAACTTTT  44 25
   CKO_04773 4377064 .. 4377080 +  -5.9  -3.35597   TGGAAGGGAAGAAGA              TCGAATA ATC TGTTCGA              TGTTTGCCGGATGGC  56 18
   CKO_04776 NONE
   CKO_04777 4378577 .. 4378601 + -17.3  -5.27335   TTAATCCCGTCGGAA          TGGCGCATTAC CGG GTAATGCGCCA          TTTTTGTTTGCACCG 100 37
   CKO_04778 NONE
   CKO_04779 4382325 .. 4382335 +  -2.4  -3.35679   ATAGCCCCTGAAAAA                 CGCC CTG GCCG                 TTATGGGTGACGGGA  45 488
   CKO_04786 NONE
   CKO_04787 4385856 .. 4385866 +  -3.2  -2.87211   AAATCAGCAATATAC                 CTCT TAA GGAG                 TATATAAGGCCGAAT  42 152
   CKO_04789 NONE
        nirD 4388829 .. 4388847 +   -16   -4.6856   CGGTTGATGAATTTG             GGGAGGCG CAA CGCCTCCC             TTTTTGACGTCTTTG 100 34
   CKO_04791 NONE
        cysG 4391329 .. 4391349 + -11.2  -5.77853   CCATTAATAAATATA            GATGCCCT ATATC AGGGCATC            TTTTTTTTAACACTT 100 34
   CKO_04793 4397191 .. 4397222 + -13.1  -5.64304   ATTAAATAAACGCCA      CGGCCTGGAGA ATATACATCA TCTCCAGGCCG       TTTTTTATTATGTTG 100 40
   CKO_04794 4397587 .. 4397601 + -12.8  -5.25893   CACGATACAAAAAAA               CCGGGG ATT CCCCGG               TTTTTTCATGTGTAT 100 56
   CKO_04804 4405255 .. 4405269 +  -8.5  -5.24989   AGAGAGACAAAAAAA               CCGGG AAATC CCCGG               TTTTTTAATGTGTGG 100 3
        mrcA 4418520 .. 4418530 +  -6.8  -3.03124   GCTCATAAGACTCCG                 TGCC CAC GGCA                 TATTCACGAATCAGA  54 472
   CKO_04821 4421222 .. 4421244 +  -5.4   -2.8547   GCGCATATCCGGCAA           AAGCCGCCAG GAT TTGGCGGCAA           TCTCATCTGGAGAAT  50 65
   CKO_04822 NONE
   CKO_04823 NONE
        hslO 4423261 .. 4423286 + -14.1  -3.32769   AATCACCAGTAAAAA         GCCTGATG-GCG AAT CGCTCATCAGGC         TTACTCATTTACAGG  90 39
   CKO_04825 4425385 .. 4425403 + -11.7  -4.79955   GCTGAGAAATAAAAA             GGGAGGC ATTTC GCCTCCC             TTTTCTTATGCGTCT 100 126
        greB NONE
   CKO_04829 4430624 .. 4430656 + -12.8  -2.89687   AGCCTTATGCTTGTA     GGCCGGAT-GAGGTA TCTA TACCGCCATCCGGCC      GTTATATTTGAAATT  79 44
        feoA 4431240 .. 4431252 +  -4.1  -3.25652   GGCGTTATTAGAAGT                GGAAG CGG TTTCC                TGTTAATTCGGTGAG  49 7
        feoB NONE
   CKO_04832 4434125 .. 4434144 +  -3.4  -4.26188   GGTCAGCGATTTAAG            CGGCTCGC GCAG GTCGGCCG             TTTTCAATATCTCCA  62 307
   CKO_04833 4435476 .. 4435486 +    -4  -3.62096   CTATTAGGCCATTAC                 TATG ATC CATA                 TTTCCGATGCTGCAC  53 83
   CKO_04835 4436328 .. 4436348 +  -3.9  -4.72272   CCGTTACGCTTCTGT            TCCCGGTTG GGG CAAGCGGAA            TTTTTCGTCGACACA  67 301
   CKO_04836 4437828 .. 4437844 + -13.7  -5.71638   TGTCACCATAAAAAA              GCCGGGA ATT TCCCGGC              TTTTTTTACTTCTTC 100 135
   CKO_04839 4442939 .. 4442952 +  -2.4  -3.40022   CATTTCCCCATTTCC               TCAC AGTGAA GTGA                TTACTATGTTGATTC  45 301
   CKO_04840 4445885 .. 4445899 +  -9.2  -2.80492   TGAATTTTCAATAAT               CGCGCG TTT CGTGCG               TACTTCGTGATAATC  60 247
   CKO_04843 4447967 .. 4447982 +  -3.2  -4.70879   GTTTTTTTGCTATTA              TGCTCG ATAA CGAACA               TTTTTGAGCTTTAAC  65 16
        glpD NONE
   CKO_04846 4449923 .. 4449961 +  -6.6  -4.78107   CGGGCTGAACACGCC   GCTGCCGATCTGCGTCAG CAC CTGGTGCAGCTCCGTATC   TTTTTCGTAATACTC  81 299
   CKO_04852 NONE
   CKO_04854 4461578 .. 4461596 +    -3  -3.28745   GATAGACAATGCCGC             CATCTGCG CGC CGGAGAAG             TTCAGTTGTTCCACC  45 320
   CKO_04861 4467581 .. 4467593 +  -3.3  -2.72661   CCTCTCTCCAGGAGA                GGGGA ATA TCCCG                TAATTAAAAGTAGTC  43 52
   CKO_04862 NONE
   CKO_04863 4469355 .. 4469375 +  -3.3  -2.67515   AAACAAAGCCAATAA            GTATCTTTA CGA TGCAGATAC            TCCTGTCGTCATCAC  43 105
   CKO_04864 NONE
   CKO_04866 NONE
   CKO_04867 4470489 .. 4470509 + -11.1  -3.85698   GTTCAGGGTGTAGGT            GACGGCCAC CGC GTTGCCGTC            TTTATCCACCACCGA  87 474
   CKO_04869 4472258 .. 4472289 + -14.4  -4.17556   CAGATGCAGTCCACG      CCCCAGCGCAGCAGT TCC GCCGC-GCGCTGGGG      TTTGTTGACGGTGTA 100 73
   CKO_04881 4482652 .. 4482690 +  -2.3  -4.09586   AATAACGGTACAAAG   GGCGGAATAAAACGCTG CCTTC CAGGGGATTATCCTGCC   TGTTTTTCATTCTCT  55 93
   CKO_04882 4483504 .. 4483536 +  -3.2  -3.15292   CCTGCAATGACTGCA      ACGCCGCGTAGGTG GTCCA CACAAACGCGCCGC      TTGGGTCCTGTTTCT  43 311
   CKO_04886 4487168 .. 4487225 +  -4.9  -4.71426   GGCAGGGGATGAGAT GTTTTG-ATGCTCTTTCCCTGCGAACGG GAA CTCATTGCAGGGAAAGAGTATACCACGC TTTTATTAATCGGGA  72 142
        rsmD NONE
   CKO_04894 4491727 .. 4491743 +  -7.9  -4.16921   GCTGCTGACGCGAGC              GCCGCTC GTT GATCGGC              TTTTCGCGCTTATTG  74 305
   CKO_04895 NONE
   CKO_04897 4492674 .. 4492693 + -12.2  -2.95223   TTTAATAACGCTTGA            CTCTGGAG TCGA CTCCAGAG             TGTATCCTCCGGTTA  80 36
        zntA 4495053 .. 4495067 +  -2.1  -4.60487   GTCGGCAATCGCCTT               CATCA ACGCC TGGTG               TTTTTCGCCATACTG  63 140
   CKO_04901 NONE
   CKO_04902 4497918 .. 4497945 + -18.4  -5.40072   GTTAAGACGATGACA        CGGCCTCCTGCG ATAC CGCCGGAGGCCG         TTTTTTTAACCGCCA 100 43
   CKO_04904 4500312 .. 4500327 +  -4.7  -4.96848   GGATAATTAATTTAC              CTACC AACCAG GGTAG               TTTTTATCTACGCAC  78 35
   CKO_04905 4500533 .. 4500556 +  -4.6  -3.75105   GCATAAAATAAAAAC          CG-ACGCCA TTATGGC TGGCGTTCG          TTATTAATAAATTAA  56 106
   CKO_04907 4501009 .. 4501020 +  -2.2  -3.91911   CGGGTCTGTAATTCA                G-GCG GTA CGCAC                TTTCATTCAGGTGGC  53 30
   CKO_04908 4502222 .. 4502242 +  -9.8  -2.62515   AGAAAAAATAACAAA            GTGACGTT AAAAA AACGTCAC            TGGTATCACCGGATT  68 30
   CKO_04909 NONE
   CKO_04910 NONE
   CKO_04911 NONE
   CKO_04912 NONE
   CKO_04913 NONE
   CKO_04914 NONE
   CKO_04915 4506573 .. 4506585 +  -3.3  -3.36671   GCATACCGCCAGCAG                CGGGA AGA TCCGG                TTATGCCGTTGACCT  49 1
   CKO_04916 NONE
   CKO_04917 NONE
   CKO_04918 NONE
   CKO_04919 NONE
   CKO_04920 NONE
   CKO_04921 NONE
   CKO_04922 NONE
        fabG 4514623 .. 4514638 +  -3.2  -3.21924   ACCCGCCAGGTCATA              TCCATC AATG GAGGGA               TGTTATGACGCGTCG  45 2
   CKO_04924 NONE
   CKO_04925 4516574 .. 4516601 +  -7.8  -2.98493   CAGAACACGTCAAAA        GTATGATGAATC TTTA GAATCGTCATAC         TCATTTAGTCGTACC  61 138
   CKO_04926 NONE
   CKO_04927 4519135 .. 4519154 +  -2.8  -3.00985   CCGCGCATTCGTCGC            CATGAAGG AGCG CATTCGTG             AATTTTTTTCTCTCT  43 5
        nikC NONE
        nikD NONE
        nikE NONE
   CKO_04931 NONE
   CKO_04932 4522041 .. 4522057 +  -3.6  -2.84504   AGGCCGGATAAAGCG              TAGCCG CCATC CGGCAA              TAATGTTTACGCCAT  44 46
   CKO_04937 4527333 .. 4527360 +    -5  -2.59927   TGGCAGAGAGACGAT        G-TGGTATATCAA CCG TTGATAAACCATC        TAAATTATAAACATT  47 212
   CKO_04939 4528692 .. 4528703 +  -7.2  -3.52652   CGACCGCTCTCTGGT                CGGG CAAA CCCG                 TTATCCTTCGCTCAG  63 51
   CKO_04941 4531736 .. 4531757 + -15.9  -5.53991   AATCAACCGTATTGA           GCGGGTCAG GAAA CTGACCCGC            TTTTTTTGCTCAGTG 100 137
   CKO_04943 NONE
   CKO_04944 4533171 .. 4533188 +  -5.5  -3.37533   GTCAGACTTTTTCGG             CGCGTTT TGGC ATACGCG              TTCATACTTTTCGGG  56 105
   CKO_04945 4534720 .. 4534737 +  -8.4  -6.32216   AACTTTTAGTTTTGA             CCGCGA GTAACA TCGCGG              TTTTTTTTTATCTGT 100 46
   CKO_04946 4535146 .. 4535158 +  -6.3  -4.41616   CAACTAAAAGAGGGC                TCGTT ATG AACGA                TTTCTTTAAAGAGCT  75 17
   CKO_04948 4535487 .. 4535502 +  -2.4  -3.71649   GACATAGCCGCATCC              GGCCTG CGTT CGGGCA               TTTACCCTTTACGCG  50 74
   CKO_04950 4537483 .. 4537512 +  -2.7  -4.24342   CCCTGCATGAACCGT       AGGCCCGATAAGCG AAG CGCC-ATCGGGCAA       TTTGTTACTCCACCA  60 65
   CKO_04953 4540467 .. 4540479 +  -5.5  -4.50976   CGCTTACCGGCCTAC                GGGTA ATC TGCCC                TTTTCTGCTGTAAAC  72 0
   CKO_04955 4541430 .. 4541445 +  -2.6  -2.80016   ATCGCGAATATTTTG              GCG-AAT GGC ATTGCGC              TCATTCGTCCTACAA  42 80
   CKO_04956 4542896 .. 4542943 +  -6.3  -4.18018   CATTTACGCGGTCAT CCG-GCGC-CATGCCCGAT-GGCG CTA TGCCTATCGGGCCTACGCGTGCGG TTTTCCGTAGGCCCG  69 89
        treF 4546876 .. 4546890 +  -5.7  -3.53012   GGTCCCAGGTGATCC               CCATG CGGCT CATGG               TTTCCCGCGCGGAGG  57 441
   CKO_04961 NONE
   CKO_04962 4551227 .. 4551254 +  -5.4  -3.28791   GCGCGATGCTTATCC        GGCCTACCGCCC GGCA GGTCGCTACGCC         TTATACGGCACGCAT  54 62
   CKO_04963 4553026 .. 4553037 +  -7.2  -4.56597   GGCCCGGCTTTCACC                CCCG CCTG CGGG                 TTTTTAAACGACCCG  83 236
   CKO_04968 4557233 .. 4557255 +  -6.2  -4.41494   GAATCAACGCCATAT           CTTGCGATAG CTG CTGACGCAGG           TTTTGATTCAACATC  73 275
   CKO_04975 4570055 .. 4570076 +  -8.7  -3.51232   CATGGAGATTTCAAC           GC-GGTGCGC CCG GCGTACCTGC           TTACTTTCCACAGAA  69 477
   CKO_04980 4573454 .. 4573472 +  -3.1  -2.82933   TGGGATGAACTACGC            CACATGCC TGCC GGCG-GTG             TCTGGTGGGTTGACG  42 152
   CKO_04981 NONE
   CKO_04982 NONE
   CKO_04983 4576973 .. 4576988 +  -3.2  -4.36914   CACGCTGGAAAGATT              CTTGCC AGCT GGCAAC               TTTTCTGACGACCCG  62 172
   CKO_04984 4578314 .. 4578341 + -13.4  -3.04144   ATTCTGACCATTACG        GTCGGAGCTGGC CTGC GTCGGCTCCGGC         TGTTGAGAATCAAGG  84 34
   CKO_04987 4579730 .. 4579752 + -10.5  -3.17392   AATAACGCGTTCCGT           GCGCCGTCG ATTCC TGGCGGCGC           TTAACTTACCCCCTC  74 36
   CKO_04989 4582287 .. 4582302 +  -6.8  -3.96148   GCACCACGCCCGGCA              GCGACGC CAG GCG-CGC              TTTATCCTGCGCGAA  68 165
   CKO_04999 NONE
   CKO_05000 4593003 .. 4593025 +  -7.7  -2.66695   TTGCCCGCACAGCCG           TTCCCCAGT CGCGA GCTGGGGAG           ATCTTTGGTCAACAC  58 97
   CKO_05001 NONE
   CKO_05003 NONE
   CKO_05004 4596086 .. 4596128 + -10.6  -3.30243   ATCGTTGTGCCGGGT GGCGACAGC-GCCACCGGGC ACATC GCCGGATGGCGGCT-TCGCC TTATCCGGCCTACAT  77 40
   CKO_05005 4597217 .. 4597233 +  -2.2  -3.19339   GCGAGCTGATCGTTC              GCGG CTCCACCGC CCGC              TAATTTTCCTTCGTG  43 6
   CKO_05006 NONE
   CKO_05007 NONE
   CKO_05008 NONE
   CKO_05009 4601373 .. 4601414 +  -2.7  -2.60901   GCAGGTCGCAGGATA ATAAATGGCCGGGCGGCGGC GTT GCC-CTGCCCGGCCTACAAC GTTGCTTAACCGTAT  41 25
   CKO_05011 4602850 .. 4602868 +  -5.9  -3.53343   GATTTTTTCGTTTAA             CGGTCCT GTTAA GGGGCCG             TTTCCCGACAGACTT  58 51
   CKO_05012 4603347 .. 4603366 + -11.4  -5.91981   GCTCAGAATTGAAGA            TCCCTGCC AATC GGCGGGGA             TTTTTTTTACCTTTT 100 55
   CKO_05014 4606670 .. 4606682 +  -6.2  -3.56568   CGGTGTTATAACGCC                GCGC CGCCT GCGC                TTTGCACAATGCTTC  57 501
   CKO_05018 4607992 .. 4608011 + -11.4  -2.84693   AGGCTGATACGCGCA            GGCTGGTC AGTT GACCGGCC             CTTATTCGTCATCAG  74 12
        xylF NONE
   CKO_05023 NONE
   CKO_05024 NONE
   CKO_05025 NONE
   CKO_05026 4616817 .. 4616847 + -16.9  -3.30124   AGCGAAGCGCCACCG       GGCGTTTGTGCCG GATGG CGGCGCAAGCGCC       TTATCCGGCCTACAA 100 72
   CKO_05028 NONE
        malS 4620028 .. 4620040 + -10.5  -3.22298   AGGTCATGGTCGTCT                GGGCG GGT CGCCC                TTAATCCTGCCTGAC  74 9
        avtA 4621520 .. 4621542 +  -9.9  -4.11216   CTCAGACGGGTTGCG          CGTGCAGTCG TTGT CG-CTGCACG           TTTTCCACATCAAGG  83 75
   CKO_05033 NONE
   CKO_05034 NONE
   CKO_05035 4625701 .. 4625719 +  -5.3  -2.77192   AGAAAAAGATATACC            TCGTCAGC GTTG GCTG-CGA             ATTATTCCGCCCATT  49 169
   CKO_05036 NONE
   CKO_05037 NONE
        sgbH NONE
   CKO_05040 NONE
        sgbE 4631072 .. 4631086 +    -5  -2.74248   TTTTTCCCAAACGTT               GATGAG TAA TTCATC               CTTTGAGACATATTG  47 318
   CKO_05044 4634043 .. 4634056 +  -9.5  -3.18735   CATAGGCCATCGCTT               CGCGC GCCT GCGCG                TTGCTGCCCTCTTCC  68 438
   CKO_05049 4639421 .. 4639433 +  -3.3  -5.06816   TCTGCCGGAACTGGG                CGACA ATT TGCCG                TTTTTGTTCGGGAAT  76 331
   CKO_05054 4643219 .. 4643240 + -12.3  -3.64703   CTGCGGTGTACGGTT           TCCTCTCCC GCAA GGGAGAGGG            TTTGGGTGAGGGGGG  88 215
   CKO_05055 NONE
        mtlR 4645167 .. 4645177 +  -4.6  -2.62958   TCATCGGGAACCATA                 TCGC GCG GCGG                 CGTTTTATTCAGATA  44 141
   CKO_05058 4645901 .. 4645920 +  -2.9  -4.21936   GCCTGAAAGAGATGA            C-CGGTTT CGCAA AAACCGAG            TTTTAACCTTCTGCC  60 0
   CKO_05059 4647839 .. 4647850 +  -2.2  -2.86271   GCCTATGTCTTAACC                TGGA TGAT TCCG                 TGATTGTGATGCCAA  40 11
   CKO_05060 NONE
        lldD NONE
   CKO_05062 4649917 .. 4649955 +  -5.9  -3.13566   GGTGAACGTATTTTC   TGCTATTCTGCCCCC CGCACTTAA GGGGGCAGTTAAGCA   TGTTGAATATCGTAT  54 2
   CKO_05063 4650441 .. 4650453 +  -6.2  -3.30124   TGATTTCTGTCGGAT                GGCG GCTGA CGCC                TTATCCGACCTACGG  59 38
   CKO_05070 4655447 .. 4655469 +  -4.1  -2.97109   TTCATCGTGGAATAA          TCCT-TCCCC ATGA GGGGAAAGGC           GTTTAATTCCATTAC  47 26
   CKO_05071 4656825 .. 4656837 +  -3.4  -4.51174   CTGGCAAACTCGCCA                TCGT AATCG ACGA                TTTTGGTTATCGTCC  64 111
   CKO_05073 4657700 .. 4657712 +  -2.6  -3.53012   CCCCAGAACGCTAAC                GCGG ATTAA TCGC                TTTACGGGCAACGCG  49 17
   CKO_05075 4660068 .. 4660081 +  -2.3  -2.73681   CCATTTTACGCGCCA               GTTCC AGAC GGTAC                TCATTCACATCCGTG  39 498
        rfaD NONE
   CKO_05079 NONE
   CKO_05080 NONE
   CKO_05081 NONE
   CKO_05082 NONE
   CKO_05083 NONE
   CKO_05084 4669372 .. 4669387 + -10.4  -5.29385   ATTCATTAAAAAAAA              GCTCCC CGAG GGGAGC               TTTTTTACTTACCTT 100 32
   CKO_05088 4673577 .. 4673587 +  -2.6  -3.53811   TTTTTAAGCAAAAAG                 TTAA TTT TTAA                 TTTCAAAACAATAAG  49 155
   CKO_05090 NONE
        coaD 4675594 .. 4675605 +  -7.2  -3.30124   GCTTTTACCGGATGG                CGCG TCAG CGCG                 TTATCCGGCCTGCAA  61 44
   CKO_05092 4676579 .. 4676603 +  -3.6  -4.62872   CGTGCTGACGGACAA         CTGGATC-GAA CTTT TTCAGTTCCAG          TTTTTCCGGCTTAGT  69 62
   CKO_05096 NONE
         dut 4679700 .. 4679726 +  -7.3  -2.65264   GATAACGACATAACA         TCGCCGCAAAC GCTGA GTTTGCGGTCA         TAGTGTGGATGCTCG  55 57
        slmA 4680377 .. 4680399 +  -6.9  -2.58579   GCAATTGCAGTAACA           GCGTAGCCG GATGG CGGCGATGC           CTTATCCGGCCTTAC  55 28
   CKO_05102 4682872 .. 4682905 + -18.3  -2.71497   AGTAAACCTCATTCC     CACGTAGC-CCGTCGC GAT GCGATGGCGCTACGTG     CTTCCTTTACACTCC 100 36
   CKO_05103 4683783 .. 4683796 +  -5.2  -3.29144   GCCAGTTGCCCAACG               CCCG TATTTC CGGG                TTATCCCGCCACTGG  52 72
         gmk 4686292 .. 4686307 +  -3.3  -3.21924   CAAACTGTTGGCAGA              CTGAA CCCACT TTCAG               TATTATGCCCAGTCA  47 22
        rpoZ 4686632 .. 4686642 +  -2.4  -2.83082   CGTCGTTAATCACAA                 AGCG GGT CGCC                 CTTGTATCTGTTTGA  40 32
   CKO_05107 NONE
   CKO_05108 NONE
   CKO_05109 4691573 .. 4691584 +  -4.4  -4.17657   GTAAAATTTATAAAT                GCAA TCGT TTGC                 TTTTACCATCTGGTC  62 63
   CKO_05111 4693031 .. 4693072 +  -6.6  -3.38314   CCAGAGAAGCCGTAA GCGAAAT-GCGGTGATGAT CGACA ATCATCGCCGCTGTAACGC TCTTTCACCATTCCC  59 26
   CKO_05112 4694895 .. 4694905 +  -6.8  -4.36914   GCTACGCGTACCGGG                 CCTG TGA CAGG                 TTTTCTCACGAAACG  74 59
   CKO_05114 4695588 .. 4695599 +  -2.2  -4.07124   GTGCGGGCAGATCAT                GTTC AGCG GGAC                 TTTCTCTCCCTGATA  54 342
   CKO_05116 4697524 .. 4697548 + -11.4  -5.24129   GCTTCTGATAAGCCC          CCAGGGGCGA GAAAG TCGCCCCTGC          TTTTTTATGCGCCGC 100 33
   CKO_05117 4698735 .. 4698753 +  -6.6  -3.05997   CGACTGTCGTAAAAG             TGGGCGAT GCT AACGCCCG             TCTCGTTTGTGCCGC  55 29
   CKO_05118 4699735 .. 4699762 +  -4.9  -4.49337   CGGCATAAGGCAAAA        GAGTGGACT CCAATAATCT GGTCCACTC         TTTTATCGCTTATAA  70 33
   CKO_05125 4707218 .. 4707232 +  -4.2  -3.78022   AGACGCTGTCATGTA               CCGG TGAAAGT CCGG               TTTGCTGGATGTAGG  58 213
   CKO_05133 4712735 .. 4712750 +  -6.1  -3.73775   CATAAGCCTCTTCAA              TCGGC AGGAAA GCCGA               TTTGATGACACTAAA  60 87
   CKO_05135 4715952 .. 4715973 +  -5.8  -4.44819   ATATGTAAAACGTCA           TGGGTGAC CGAATC GTCACCCC            TTTTGATGTATTATC  72 33
   CKO_05139 4720048 .. 4720079 +  -2.9  -3.13141   TATTTCAGGGAATTC      GTCGCGC-TGACGG GCGTG CCGCCACGCGTAAC      TATATTGGCATTTTA   0 381
   CKO_05138 4717803 .. 4717814 -    -3  -3.51232   GCCCTGTTAAACCAA                CTTT GCAG AAAG                 CGCCTGACAGGCTTC  49 5
   CKO_05137 4717268 .. 4717294 -  -8.7  -3.22858   GCAACTATATTAATA        GCCGGAT-GGCG CTGA CGCTTATCCGGC         CTACAGATTCATCGT  65 61
        nepI 4715661 .. 4715671 -  -2.4  -4.51743   TGACGATGAAACAAA                 CCGC TCT GCTG                 CTCTTTACCGCCCTT  62 338
   CKO_05134 4712629 .. 4712657 - -14.5   -2.5055   GAGGGGAGAAGAGAG        GTCTGGCGAGGCG CAG CGCCACGCCAGAT        AAGGGATCAGCTATA  86 32
   CKO_05132 NONE
   CKO_05131 NONE
   CKO_05130 NONE
   CKO_05129 4709872 .. 4709885 -  -2.3  -3.21924   TCATGGCTTACAACA               CTCCC AGCA GCGAG                CAGACCACGCTAAGC  43 4
   CKO_05128 NONE
   CKO_05127 4707977 .. 4708003 -  -5.7  -5.04597   AGGCATATACAAAAA        GCCCGG-TGGCG CGAA CGCTTGCCGGGC         CTACGTAAACTACGC  80 43
   CKO_05126 4707032 .. 4707059 -  -2.6  -3.76952   TTCATTTAACTTAAA        GCGTTACCGA TCACCACC CCGGCACCGC         GCCACCGTTAAAGAT  52 8
   CKO_05124 4705547 .. 4705576 - -15.2  -2.60212   TCATCACCTCATAAT       CAGGAGTAAAGG ACGCCG CCTTTACTCCTG        TCTTTATTACTCGTA  90 32
   CKO_05123 NONE
   CKO_05122 NONE
   CKO_05121 NONE
   CKO_05120 NONE
   CKO_05119 4699735 .. 4699762 -  -5.6   -4.3208   CGGCATAAGGCAAAA        GAGTGGACTCCAA TAA TCTG-GTCCACTC        TTTTATCGCTTATAA  69 35
   CKO_05115 4695473 .. 4695488 -  -3.2  -3.29658   CTACAAAATACAAAC              GGCAAC GCGT ATCGCC               TCACATCGGGGGGAG  45 26
   CKO_05113 4694291 .. 4694323 -  -9.2  -3.53811   GCCAGGCTGGTTAAA     CAGCCTGACGCTGAA AAAA TTCAGCGCCAGTC-G      CAACCTGGTGATTGA  68 525
   CKO_05110 4691160 .. 4691170 -  -2.4  -4.21908   GATGATTATCGAAAA                 CCCG GAA CGGT                 TAGGTCTGGCACAAT  58 278
        ligB 4683625 .. 4683638 -  -2.3  -3.08642   ACACTACGTATCCAA               CCAAG ACGT CGTGG                TTATCTCCACGCTGG  42 120
         rph 4681132 .. 4681149 -  -8.4  -6.06529   TACAGACAAAAAAAA             GGCGAC TCGCTG GTCGCC              TTAAAATCAATTTTC 100 32
        pyrE NONE
   CKO_05099 4680211 .. 4680224 -  -2.3  -4.61482   TGCGGGAAAAAAGAA               TGCGC GAAG GCGAA                GGGTACGCCACGGAT  65 111
        radC 4677150 .. 4677163 -  -6.7   -4.2074   TCCCGAACAGACAAA               GATCC CGAT GGATC                GCGCGAAGTGTTCTA  72 38
        rpmG 4676495 .. 4676510 -  -8.2  -5.86976   CCAGAAAACAAAAAA              CCCCGC CGAA GCGAGG               TTTTTCACTACATCA 100 50
   CKO_05093 4675245 .. 4675268 -  -6.6  -3.03124   GTTTACCCTTGAAGA          GCGTGTAGCG CTGG CGCAACAGGC           GACGGCGCACCTCGG  54 384
   CKO_05089 NONE
   CKO_05087 NONE
   CKO_05086 NONE
   CKO_05085 4669372 .. 4669387 - -10.4  -5.86965   ATTCATTAAAAAAAA              GCTCCC CGAG GGGAGC               TTTTTTACTTACCTT 100 30
   CKO_05077 NONE
         tdh 4659462 .. 4659474 -  -6.3  -4.15508   AAGGAAGTCTGAAAA                TTTGC CAG GCAAA                TGATATTTTAGTATT  67 200
   CKO_05074 4657415 .. 4657472 -  -4.9  -2.58249   CAGATGGTCTATAAC CTGCCTGCGGAT-ATTACGCTGG-TGC GTCCGA GCAGCCTGCTCAACGAGCCGCAGACAG ATACCTCTACGCCAA  44 248
   CKO_05072 4656586 .. 4656599 -  -3.8  -3.31144   CCTTTATGGGTATAA               CCAG AGCGCA CTGG                TCAGCGTTGGCACAC  47 196
   CKO_05069 NONE
   CKO_05068 4653218 .. 4653233 -  -3.2  -3.14132   TCCCGTGTTGAGTAA              CGCG TTATTTCC CGCG               CACTAATGGCAGGTT  45 14
   CKO_05067 NONE
   CKO_05066 NONE
        gpsA 4651359 .. 4651381 - -13.4  -2.74012   GTATCAGGCTAACGA           CCGGCCCG TTCTTCG CGGGCCGG           GTCATTTAATAAAAC  81 53
        cysE 4650198 .. 4650209 -  -5.8  -3.78775   GCTCTGACCACCAAA                GGCA CCCC TGCC                 CATAGCGCGGTGAGC  63 326
   CKO_05057 4644685 .. 4644710 -  -5.3  -3.35046   TTATGCGGTGAAATA         CGCAGTGGAAC CGTT GCTCGACGGCG          ATGGACCGCTGGGCG  53 379
   CKO_05053 4640796 .. 4640817 -  -6.7  -3.73042   TTTCGGATGAAAATA           TCTTGTGAT TTAG ATCACAAAA            ATCCAACAAACCCTC  64 13
   CKO_05052 NONE
   CKO_05051 4639052 .. 4639067 -  -6.8  -4.72986   CATTTTTACTAAAAA              GCAGGT GACG ACCCGC               TTAATGATCCAAATA  81 26
   CKO_05050 NONE
   CKO_05048 NONE
   CKO_05047 NONE
   CKO_05046 4634866 .. 4634892 -  -2.2  -5.65678   ATAAAATATAAAAAA         GCACATTAGG TTCATCG CCTGTTGTGC         TTTATATAATTCAAG  83 83
   CKO_05045 4633580 .. 4633591 -  -4.4  -2.90392   GACGCCGGAATGACA                CGAT GCGT ATCG                 TATATCCGGCAATCA  46 46
   CKO_05043 4631821 .. 4631832 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG AAGC CGCC                 ATCCGGCAACGTGGT  61 51
   CKO_05042 4630793 .. 4630817 -  -9.9  -5.94214   AAGACAATAAAAAAA          TCCCTGGGCGT AAA ACGTCCAGGGT          AAGAATCCGAAGGCG 100 73
   CKO_05038 4626472 .. 4626484 -  -4.8  -3.37259   AACCATCCTCAAAGA                GCTG ACCCA CAGC                AGCATGGGGCAAGTC  54 406
   CKO_05032 4622019 .. 4622032 -  -2.3  -2.89191   CCAGAGTGCCAGAGA               GAGCG CGAT CGCTG                CTTTGATCCGACGAG  40 90
   CKO_05031 4621130 .. 4621154 -  -5.1  -3.53012   TGCGCCTGTCGGAAA          CGGTAATAAAA CCG TTCTACTACCA          GCGCGTACTGGAGAC  55 377
   CKO_05027 4616737 .. 4616752 -    -9  -3.67634   CACGACGCCAAAAGA              GTACCG CGAT CGGTAC               AGTGAGGTGTTGTTG  76 146
   CKO_05021 NONE
   CKO_05020 4608508 .. 4608533 - -17.7  -4.15114   AATATGAAATAAGAA         TTCCTTCCGGC CACT GCCGGAAGGAA          TAGCGGATTAAGACA 100 33
   CKO_05019 4607863 .. 4607877 -  -2.1  -3.29511   TTCACGCGCTGATAA               TCCAT GCGCT ACGGA               CGAATGGCGTGGAGT  43 161
   CKO_05017 NONE
        glyQ NONE
        glyS 4603396 .. 4603411 - -10.4  -5.60993   TTCCCCATAAAAAAA              CCTGCC AGAT GGCAGG               TTTTTTTTATTGCGA 100 46
   CKO_05013 4602667 .. 4602695 -  -8.2  -3.39717   AGTTACGAAGAGGAA       CCGGGCTAAAAAC AGAT GATTTT-GCCCGG        GCGATGGGCGTAACC  64 411
   CKO_05010 4601378 .. 4601409 - -13.6  -4.35483   TCGCAGGATAATAAA      TGGCCGGGCGGCGGC GTT GCC-CTGCCCGGCCT      ACAACGTTGCTTAAC 100 83
   CKO_05002 4592701 .. 4592719 -  -8.8  -3.06183   GCCAGCGTGATGGAA             GCGCGC TTTTTGG GCGCGC             TGTTTGTCACGCCAG  63 215
   CKO_04998 4591085 .. 4591101 -  -4.4  -3.04715   TATTCTCGTTAAAAT             CT-GGCG CTAA CGCCCAG              GGTGTACAGGTAGTC  47 2
   CKO_04997 4589565 .. 4589598 - -18.3  -3.62255   CGGAAGAATAAGCAA     GCGGCCCGGATATTT ACAA AAATATCCGGGCCGG      GAAGTGGTTAAATGA 100 50
   CKO_04996 4587522 .. 4587539 - -12.7   -4.7497   TCCAGGCAGCAAAAA             GCCAGCC CGTA GGCTGGC              TTTTCTGAATTGGTC 100 204
   CKO_04994 4585098 .. 4585130 - -10.6  -2.91924   GTATTGCTCACAAAT      CTTATCCCACGGCA TACGC CGCCGTGGGGTAAA      GCATTACGCCGGGTG  72 128
   CKO_04993 NONE
   CKO_04992 NONE
        dppD NONE
        dppF 4581070 .. 4581088 - -11.7  -5.80817   TGGAATATAAAAAAA             CCGGAGC ACAAG GCTCCGG             TTATGAGGCAATAAC 100 47
   CKO_04988 4579621 .. 4579647 -  -2.9  -3.91897   TTCCTGATCTATAAA         GTCACGCAACT GGAAA AACTGCGCGGC         CTGAAAACCTGGCTG  54 131
   CKO_04986 4577694 .. 4577708 -  -7.8  -3.15544   CCGTACTGCCAGCAA               CCCCTG CTC CAGGGA               GCCGATATCGTGGTT  62 466
   CKO_04985 4576835 .. 4576862 - -10.6  -5.01811   GCAGTAAACGAAAAA        GGCCTGAT-GGCG CTA CGCTTATCAGGCC        TACAGGTCAGGCACA 100 32
   CKO_04979 NONE
   CKO_04978 NONE
        bcsA NONE
   CKO_04976 NONE
   CKO_04974 NONE
   CKO_04973 4562477 .. 4562490 -  -8.1  -3.30124   TTGTAGGCCTGATAA               GACGC GAAC GCGTC                GCCATCAGGCGTTCG  67 45
   CKO_04972 NONE
   CKO_04971 NONE
   CKO_04970 4558742 .. 4558767 - -16.2  -3.37259   AATTATGCGCAAACA         CCCGCAGTCC TGGAAG GGACTGCGGG          CATAAGAGGTGAGAT 100 40
   CKO_04969 4556819 .. 4556832 -  -3.1  -4.45168   TTGCCAAAAGAGAAA               GTGAT CGAC ACCAC                CGCAGCGGGCGACTC  64 262
   CKO_04967 4555062 .. 4555075 -  -2.3  -2.66316   GCGGGTATTACAGCA               TCAGG ATCA CCTGT                TCAAGGTTCTCCAGC  39 4
   CKO_04966 NONE
   CKO_04965 4552846 .. 4552857 -  -5.8  -3.30124   CCGTAGGCCGGATAA                GGTG TTTA CACC                 GCCATCCGGCACTAT  56 43
   CKO_04964 4550855 .. 4550867 -  -4.7  -4.09864   ATTGAGTGGCTAAAA                CCCGC CTG GCGGT                TGATTGGGCTGGCCA  62 510
   CKO_04960 4548208 .. 4548226 -  -3.9  -4.02911   GGGAAATAAAGAGAA            GTCGATGA ACAG TCATCG-C             GGAATATTAAAATTA  59 136
   CKO_04959 4545936 .. 4545968 -  -6.2  -3.28001   GATCGTGAAACCGAA     GCGGCATTTCGCCAG AAAG CCAGCGAT-CGCCGC      GCCGCCGTAAACCGC  54 523
   CKO_04957 4542587 .. 4542606 -  -2.8  -3.62572   GACGACCAGGTGAAA            GTGTACAA ATCA TCGTTCAC             AGCCATGTACACTGC  51 408
   CKO_04954 NONE
   CKO_04952 4537353 .. 4537368 -  -4.6  -3.52779   AGCGAAAAAACTCAA              GCTGTC GATT GTCAGC               GAGCTGATCTATCCA  53 174
   CKO_04951 4536094 .. 4536104 -  -2.6  -3.25986   ACAGCACATCAGGAA                 TTAA AAT TTAA                 TTCATTATTTATCAT  45 37
   CKO_04949 4535449 .. 4535474 -  -9.1  -3.10612   TCTAATCGCAACATA         GTCCGATAAGCA CAG CGCT-ATCGGAC         ATAGCCGCATCCGGC  67 55
   CKO_04947 4534885 .. 4534912 -    -2  -3.22298   CTCACCGAGGATGAA        TATCGCGCATTT CAGG AAATGCTCATTA         TAAACCCGCTGGAAG  43 46
   CKO_04942 4531530 .. 4531553 -    -3  -4.16943   GTCTACAGCGCAAAA          CGGTCACCAG CATT CTGATGGCCT           GGGTGTTTACCCTGC  58 239
   CKO_04940 4528470 .. 4528490 -  -8.3  -3.53444   GTATCGGCGTGGAAA            TCACGCTGA TCG TCAGCCTGA            CGCTGGTATGCATTA  65 239
   CKO_04938 4527047 .. 4527068 -  -6.5  -3.21395   ATGCGTGTCACAACA           CCCCCGAAC ACAT GTTCAGCGG            GATATTCCATCCGGG  57 19
   CKO_04936 NONE
   CKO_04935 NONE
   CKO_04934 NONE
   CKO_04933 4521501 .. 4521516 -  -6.1  -4.36914   GCGTGTGTTACAAAA              TGCGG TACTTC CCGCA               TTTCCCGTGCGCCGT  71 410
   CKO_04906 4500220 .. 4500239 -  -3.6  -4.08216   CCAGCGTCTGTAAAA            TCTGGATGG AGA CCA-CCAAA            GGCGGCAGCAAGCTG  60 171
   CKO_04903 4497420 .. 4497451 -  -6.6  -3.35176   TAACAACGATACCAA      TGCTC-CGGCAGAGG GAA CCTCTACGGAAAGCA      ACGCAACCGGACAAC  58 478
   CKO_04900 4496102 .. 4496115 -  -5.3  -2.67021   CCCTGAAAGATGAAG               GTGAA GTGC TTCAC                AAAAAAGCAGGAAAA  47 99
   CKO_04899 4494703 .. 4494714 -  -7.2  -3.53091   ATGTCGCGCTGGAAA                CGGC AGAC GCCG                 CCCTGACGCATAACC  62 340
   CKO_04896 4491077 .. 4491103 -  -5.8  -4.20354   AAGCGAAGTCGAAAA         CGGTCTGCCG CCCGTCC CGGCAAACTG         GTCTTTGTATCGTGA  67 458
   CKO_04892 NONE
   CKO_04891 NONE
   CKO_04890 NONE
        ftsX 4487146 .. 4487159 -  -2.3  -5.14965   ACCGCTATGAAAAAA               CACTG TGGG CAGGG                GATGAGATGTTTTGA  73 97
   CKO_04888 NONE
   CKO_04887 4486122 .. 4486134 -  -4.8  -2.90615   ACTTCGCGGAAATTA                CGCT TCGAT AGCG                GCGCGCAGTTTCTTC  49 10
   CKO_04885 NONE
   CKO_04884 4484599 .. 4484611 -  -4.7  -4.47328   AAGTTGATGACAAAA                CGGGG CGC CGCCG                CAACGGGCGGCGTCG  70 43
   CKO_04883 4483226 .. 4483252 -  -8.7   -5.4756   AACGGTAATAAAAAA        GCCGGAT-GGCG CTAA CGCTTATCCGGC         CTACGTGTTTCGCAA 100 92
   CKO_04880 NONE
   CKO_04879 NONE
        livM 4478911 .. 4478924 -  -3.1  -2.90403   TTAACGGATAATAAT               GGC-TG ACT CATGCC               TGCTCTCCTTTCGCT  42 19
        livG NONE
        livF 4477378 .. 4477418 -  -5.4  -2.62263   ACCCGGCCTACAGGA TCGAGTAGGCCCGGTAAGCG TAG CGC-CACCGGGCACACA-GA TGGTTTAGCCTCCGA  49 30
   CKO_04875 4477250 .. 4477263 -  -3.9  -5.04175   CGAATGACAGAAAAA               TAACT TTTT AGTTA                CAAATAAATGACAGC  74 19
   CKO_04874 4475766 .. 4475796 -  -6.2  -3.03124   TTTGATTCCTGAACA     GTGCCGGGT--GGCG GCTT CGCCTTACCCGGC-C      TACGGTCTTGTAGGC  55 75
   CKO_04873 NONE
   CKO_04872 NONE
        ugpC NONE
        ugpQ 4472057 .. 4472088 -  -5.6   -4.0156   GCAGATGAACAATAA      CGCGCAGCGGGTCC AGCA GGGCCAGGTGCGTG       AGCAGGTTTTACCAA  63 128
         ggt 4469934 .. 4469955 - -12.3  -3.30338   AGAACTCCCTGATAA           GCCCCCTTC CACC GAAGAGGGC            CACTTACCTCAATAT  85 34
   CKO_04865 4469217 .. 4469230 -  -3.9  -4.03888   TACTTAGAATAAGAA               TGAAT ATTT ATTCA                GGAGAAGGTTTTGTA  58 109
   CKO_04859 NONE
   CKO_04858 4464607 .. 4464639 - -14.8  -2.83403   TGTCCCTCATTAAAT      CCCCGGAAGCGTAC ATCAA GTACGCGACCGGGG      TAAGCCAGGAAGCCA  87 74
   CKO_04857 4463258 .. 4463270 -  -4.8  -3.53444   TTAGTCGTGCTCAAA                GTGG TGCCC CCAC                AGTACAAGGATCAGG  56 151
        gntK 4462635 .. 4462666 -  -9.4  -3.81287   GACACCACCATCAAA      GCAACGAAGGCGTG CATA CGCGCCTTCATCAC       TAAAAACAGCAGCAG  76 85
   CKO_04855 4461296 .. 4461322 - -10.1   -5.1101   TGAGGATGTAAAAAA        GCCGGGT-GGCG CTTG CGCTTACCCGGC         CTACGGTGTGGATAT 100 89
   CKO_04853 4459268 .. 4459283 -  -6.1  -5.48825   TATTACGCAAAAAAA              GGGTG ACTCAG CACCC               AACATTTAAACTCTG  91 134
   CKO_04851 NONE
   CKO_04850 NONE
        glgC NONE
        glgA NONE
   CKO_04847 4449569 .. 4449615 -  -9.3  -4.37092   ATCCGGCCTACAAAA CAGTCCACAGGCCCGGTAAGCG TCAG CGCC-ACCGGGCCTTTTGCCGG ATGGCGACTAACGTC  84 72
        glpE NONE
   CKO_04842 4446551 .. 4446579 - -10.2  -3.30441   TAGTAGGCCGGATAA        GGCGTTTCGCCG CCATC CGGCGCAACCCC        AATCATGTTCGTTTT  77 28
   CKO_04841 4445192 .. 4445210 -  -4.4  -4.65895   GGCCGGACGTAAAAA             CGACGCCC AGC GGGTGTTG             CTTGATGCGCTGCAA  71 523
   CKO_04838 NONE
        malQ 4437828 .. 4437844 - -13.7  -5.31275   TGTCACCATAAAAAA              GCCGGGA ATT TCCCGGC              TTTTTTTACTTCTTC 100 31
   CKO_04834 4433552 .. 4433581 - -10.7  -4.11216   TGGCGACGCGTAAAA       CGGCCAGCGCCTGC TGC GCAAGCCCT-GCCG       GTAACTGTCACTAAG  87 371
        ompR NONE
        envZ 4425385 .. 4425403 - -12.4  -5.38054   GCTGAGAAATAAAAA             GGGAGGCA TTT CGCCTCCC             TTTTCTTATGCGTCT 100 31
        nudE 4418101 .. 4418142 - -14.6  -3.55444   TGGCGACGCCTGAAA CGTCTTATCCGGCCTACA TTTTGT TGTAGGCCAGGTAAAACG  TCAGCCGCCATCCGG  95 50
   CKO_04818 4414563 .. 4414576 -  -3.1  -2.58758   ATAACGCTCCAGAAT               CGCAGA CAT TC-GCG               CCGCCGGGACTGACG  41 70
   CKO_04817 4414090 .. 4414103 -  -3.7  -3.38378   CCAGAGGTCAAAAAG               CGCGG CCAT CTGCG                AGGCTCCTTTTTAAC  49 4
   CKO_04816 NONE
   CKO_04815 NONE
        hofQ 4411950 .. 4411970 -  -4.5  -2.70498   CATATTGTAGACAAC            CCCGGAGGC AGC GTCGCCGGA            TAGCGACGAGAAGAA  45 139
   CKO_04813 4411814 .. 4411824 -  -4.6  -3.02946   TCGTTAATGATAAAC                 CCGC GTC GCAG                 ACACCTTGCGCAGCA  47 3
        aroK NONE
        aroB NONE
   CKO_04810 NONE
   CKO_04809 4408664 .. 4408685 -  -6.6  -2.97613   GACTAACTAATTACA           CCTTCTCC GGCTGT GGAGAAAG            CTCCGACAGCATCCT  55 58
   CKO_04808 NONE
   CKO_04807 NONE
   CKO_04806 NONE
   CKO_04805 4405255 .. 4405269 -  -9.2  -5.77988   AGAGAGACAAAAAAA               CCGGGA AAT CCCCGG               TTTTTTAATGTGTGG 100 122
   CKO_04803 4404230 .. 4404240 -  -2.4  -3.22884   TGATTAACTTAGTAA                 CTGG GTT CCTG                 TTCACCGCTGACCAC  43 8
   CKO_04802 4403789 .. 4403806 -  -2.8  -3.90856   AATCCCTGAATTAAA             TATTCA TTTTTT TGAATA              TTTAAGGTGTGGTAC  54 59
   CKO_04801 NONE
   CKO_04800 NONE
   CKO_04799 NONE
   CKO_04798 NONE
   CKO_04797 NONE
   CKO_04796 NONE
   CKO_04795 4397329 .. 4397340 -  -4.4  -4.09739   GTAACGTCCGCAAAA                TGGA TTTT TCCA                 TTTATCTCATACAAT  61 200
   CKO_04788 4385579 .. 4385593 -  -2.8  -2.64416   CATCGCCAGCATAAC               GTGC CAGCAGC GCAC               TGATGATGATTTGCC  41 63
   CKO_04785 4383529 .. 4383553 - -12.1  -2.50443   GCAGAGGTCAGGAAT          CGCGCGGGC ATTGCTG GCCCGCGCA          GAATGCCATTACGGC  76 34
   CKO_04784 NONE
   CKO_04783 NONE
   CKO_04782 NONE
   CKO_04781 NONE
        argD 4380348 .. 4380364 -  -6.5  -3.93262   CTGGAAGATATGAAA              CTGTGGG TAA CGCACAG              CCAGTTTATCGTTGA  68 471
   CKO_04775 4377215 .. 4377229 -  -3.4  -3.09635   AGCGCCATCAGGCAA               CCGGCA TCA CGCCGC               AATCACTTCATACGA  45 17
   CKO_04774 4376977 .. 4376994 -    -4  -3.19602   TTTCCCATATCAATA             CGCTCG TGGTGC CGGGCG              GCAAAATGGGGCTGG  47 69
   CKO_04770 NONE
   CKO_04769 NONE
   CKO_04768 NONE
   CKO_04767 NONE
   CKO_04766 NONE
   CKO_04765 4370171 .. 4370182 -  -7.2  -3.07816   GCCTCACGGACGCAA                CGGG CGCG CCCG                 TGGGGTTATGCATCT  57 57
   CKO_04764 NONE
   CKO_04763 NONE
   CKO_04762 4367334 .. 4367352 -  -5.3  -3.44998   GACGCATGAAGAAGA             TGTACGA GAATT CCGTACA             GTTGCTGAAGCTGTC  53 285
   CKO_04759 NONE
   CKO_04758 NONE
   CKO_04757 NONE
   CKO_04756 4361167 .. 4361181 - -11.4  -5.50499   TGAGACGTAAAAAAA               GCGGGA TAT TCCCGC               TTTTTTGTGCCGGAT 100 111
   CKO_04753 4359853 .. 4359874 - -14.4   -5.7946   CCTGCAATAAAAAAA           CCGCCGCC ATGACA GGCGGCGG            TTCTCAGTTTTTATT 100 36
   CKO_04752 NONE
   CKO_04751 4358604 .. 4358616 -  -2.7  -2.67123   ATACAAAAGCAATAC                GTTTC ATC AAAAC                TGCACCACGCGATCG  41 19
   CKO_04750 4358166 .. 4358205 -  -2.9  -3.42374   CTGTAGCAATAAAAG CGCATC-GC-CTTCTTTGC ACAC GCGAAGAAGCGCGGAAACG  TCACTGAGCCATGCG  47 71
   CKO_04749 4357878 .. 4357900 -  -8.4   -4.7268   AAACACGTAATAAAA           CGGCCTCACA CAA TATGAGGACG           CCGAATTTTAGGGCG  84 81
  CKO_04747a NONE
   CKO_04747 4356839 .. 4356864 - -11.2  -3.63895   TTTAAGTAGCCCAAA         GCGGGCTGCTT GCTGG AAGC-GCCCGC         CTGGTGACTAAAATT  82 50
   CKO_04746 NONE
   CKO_04745 4353376 .. 4353391 - -11.8  -4.86133   GACAGACAGCAAAAA              GGGCGC CGAA GCGCCC               TTTTTAAGTGCAGAA 100 56
   CKO_04744 NONE
   CKO_04743 4352410 .. 4352445 -  -3.8  -5.14965   AGGGGCATTAAAAAA    CCCGCTGCCGTTCGG GCCATTT CTGG-CGGCTGCGGG    TTTTATCATTGGCTG  81 62
   CKO_04742 NONE
   CKO_04740 4351774 .. 4351788 -  -6.4  -3.06312   AAATCGGCTACCTAA               GGTTCA GAT CGAACC               TGCCGTCAACTAAGA  55 66
   CKO_04739 NONE
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
   CKO_04726 NONE
        rpsQ 4346634 .. 4346659 - -12.7    -5.252   TATGGGTAGAAAAAA         TAAACGGCCCA TCGC TGAGCCGTTTA          TTCGTTGAGAATGGG 100 48
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
  CKO_04717a NONE
        rplR 4343619 .. 4343629 -  -3.2  -3.32963   ACCTCTACCTTAGAA                 CTGA AGG CCAG                 CTTCACGGGCAGCAT  47 9
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY 4340928 .. 4340957 - -12.3   -4.6645   TACAGACATACAAAA       GATTG-GCTGGCTA ATC TAGCCAGCTCAACC       CAACTTTGCAAGAAA 100 203
        rpsM NONE
  CKO_04709a 4340075 .. 4340085 -  -6.8  -3.68023   AACCTGGAAAACGAA                 GCGT TAT ACGC                 GACGTTTTTTCGGCG  66 18
        rpsD 4339421 .. 4339439 - -10.4  -3.14132   TCTCTTTGGTACTAA             GCTTTACT TGG AGTAAAGC             TCGACGATCAGGTGT  74 10
   CKO_04708 4338292 .. 4338317 -  -2.5  -3.14136   TGACGAACCAGTGAA         CCTGCCATGTT GCGG AACATAGCCTG          GCGATGGCTGCTGTT  43 117
   CKO_04707 4337948 .. 4337961 -  -9.5  -5.71712   GCGGATATAAAAAAA               CCCGC CGGA GCGGG                TTTTTTTACGTTACT 100 46
   CKO_04706 NONE
        zntR NONE
   CKO_04704 4336710 .. 4336725 -  -4.6  -4.21772   CGTAAGAAAGAAGAA              CCGACG GAAG CGCCAG               CGCCGACAACGGAAG  62 93
   CKO_04698 NONE
   CKO_04697 4330312 .. 4330323 -  -2.2  -3.36878   CTGATTTAGCCATAA                CAAC TCAT GCTG                 AATGAAGATCGATTA  45 38
   CKO_04696 NONE
   CKO_04695 NONE
        aroE 4328358 .. 4328374 -  -2.9  -3.30701   TGTCAGGAAACTGAA              TAGCCTG GTT CATGCCA              ACAGTTCCTGCTTCA  47 18
   CKO_04693 4328107 .. 4328117 -  -6.8  -3.30239   ATGGAAAGATGAATA                 CCTG AGT CAGG                 ACAGCCAGACCCAAC  61 21
   CKO_04692 4327025 .. 4327036 -  -5.8  -3.73224   CCACTCGTCAGCAAA                GCAG CAAG CTGC                 TTCCTGTTACCGTTC  61 259
   CKO_04676 4310977 .. 4310990 -  -2.3  -3.71527   GCCGAATGACCGAAA               TGACG GATG CGTCT                CAGGTGAAGTAAAAG  50 337
   CKO_04660 4297418 .. 4297430 -  -3.4  -3.61715   TATTTGCTGCAACAA                TCTG GCGAG CAGA                CAAGCACACCCCCAT  51 88
   CKO_04659 4296102 .. 4296135 -  -7.4  -2.78596   TATTCTCGTATCAGA     GTCGGCAGGGTAAT CAAACC ATCACCCTGCCGGT      ATCCGATTACTCTTC  59 32
   CKO_04658 NONE
   CKO_04657 NONE
   CKO_04656 NONE
   CKO_04655 4292466 .. 4292476 -  -5.4  -4.56597   CTTGTCTGCCAAAAA                 TGTG ACT CACA                 AACCCGTTATCCGGC  74 58
   CKO_04654 NONE
   CKO_04653 NONE
        tldD 4286969 .. 4286997 - -11.1  -4.09685   CCGCACCCGGCAAAA       GGCCCGATAACG TAACGG CGT-ATCGGGCC        TACAAAACGACTTTA  89 38
   CKO_04650 NONE
   CKO_04648 NONE
   CKO_04647 4282649 .. 4282667 - -11.7  -5.65177   ATAGCCACAAAAAAA             CCGACGC TTTTG GCGTCGG             CTCCTGAGTGTTAGT 100 36
   CKO_04646 NONE
   CKO_04645 4280686 .. 4280708 -  -3.3  -5.45652   ATGCTGAACAAAAAA           GCAGAAGCA AACGG CGCATCCGC           CTATCAGATTACTGA  89 151
   CKO_04641 4278152 .. 4278167 - -10.4  -5.83226   AACGTAATAAAAAAA              CCGGAG TCAT CTCCGG               TTTTTTACTGTGTCT 100 144
   CKO_04636 4273679 .. 4273709 -  -6.7  -3.23274   GGTCTGATAAGCGAA       GCGCCACCAGGCA ACCTG CGCCGGATGGCGG       CGAAACGCCTTATCC  57 44
   CKO_04635 NONE
        rplM NONE
        rpsI 4272537 .. 4272550 -  -9.5  -5.60993   TTTTCCATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTCGCCAATGG 100 64
        sspA 4271639 .. 4271650 -  -3.6   -3.2056   ATCCATACTGATTAA                CCCC GACC GAGG                 CGCATTTCACGTTCA  47 10
   CKO_04631 4271102 .. 4271118 - -13.7  -5.75945   AGGCGTGAAAAAAAA              CAGGCCC TCA GGGCCTG              TCTGTCTTGGTTACT 100 36
   CKO_04630 4270176 .. 4270188 -  -9.1  -3.54951   CACCCCAGTACAGAA                CGCAC AGA GTGCG                ATCTACTTCACTAAA  72 62
   CKO_04629 NONE
   CKO_04628 NONE
   CKO_04626 NONE
   CKO_04625 NONE
   CKO_04624 4265188 .. 4265200 -  -6.2  -4.37658   AATGCCGGGAGAAAA                CCCG CCCGT CGGG                TTGGTTTTGTGCGCA  71 333
   CKO_04621 NONE
   CKO_04619 4257544 .. 4257557 -  -2.3  -4.07687   ACCGCGCCTTGAAAA               GAGGC CAAA GCCTG                CCATTTTTAGCCTTT  56 329
   CKO_04616 NONE
   CKO_04615 NONE
   CKO_04614 4253916 .. 4253940 -  -4.4  -4.68384   ATTCATGTAACAAAA          CATTTAAGAT TTGCT ATCTTAACTG          CGTGCGGCCTGAAAA  69 139
   CKO_04612 NONE
        mtgA 4252400 .. 4252442 -  -6.1  -4.80656   AGGAAGAAGACAAAA GCGCGCTGCCGCTC-CCCTC TCTT GAGGCCGCGCGTCAGCGCAA TCTTAATACAGATGG  78 28
   CKO_04598 NONE
   CKO_04597 NONE
   CKO_04596 NONE
   CKO_04595 NONE
   CKO_04594 4240218 .. 4240242 -  -2.8  -5.05712   ATAAATAAGCAAAAA         GCCCAG-CTGA TAAA TCAGGCAAGGC          TTTGGTGTCAAATCC  72 94
   CKO_04593 NONE
   CKO_04592 4238522 .. 4238566 -  -7.9  -3.45134   GTAAGGAACGGATAA CGCTCTGAAC-GGTAGCCCCC GAACA AGGGGCTACCAGTGCAT-GCG GAAAAAATTACTCGC  64 33
        rpmA 4236126 .. 4236147 - -15.9  -4.74103   TTTTCAATGTAAAAA           GCCCCGCAA CACG TTGCGGGGC            TTTAATCCGTTACCG 100 54
   CKO_04588 NONE
        obgE NONE
   CKO_04585 4233785 .. 4233818 -  -6.8  -2.77503   ACAACTAGGTAAGGA    TAGTGCCGGAT-GGCG CTGA CGCTTATCCGGC-CTA     CACACTAGATGGGTC  56 23
        greA 4231557 .. 4231571 - -12.8  -4.36914   TCTTCGTTGATAAAA               GGCCGC ATA GCGGCC               TTTTTCCTTTCTTTA  95 74
        rrmJ 4230346 .. 4230360 -  -2.8  -3.40899   AACCTCTTATTACAA               CTGTGT TAA AAACAG               CGTCAGGATACTCTA  47 80
        hflB 4228327 .. 4228346 -  -9.2  -5.56264   TTCAAATATAAAAAA            CCCCGGAG CAAG CCCCAGGG             TTTCGGTGAAGCAGA 100 60
        folP NONE
        glmM 4226073 .. 4226088 -  -8.2  -5.06414   TTCCTGCAACAAAAA              GGCAGC AAAC GCCGCC               TTTTTAGTCACTTAT  91 49
        secG 4225425 .. 4225440 -    -9  -5.90981   GCAGACGAAAAAAAA              GACGCT TTTC AGCGTC               TTTCTTTCGGAATAT 100 137
   CKO_04571 4222832 .. 4222848 -  -6.5  -2.51207   CAGACTATTAAAAGT              GGGGAAC CAG GTTCGCC              TTCTGGATATTACTC  52 1
        nusA NONE
        infB NONE
   CKO_04567 NONE
        rbfA NONE
        truB 4216969 .. 4216983 -  -2.8  -5.03145   GAACTTGTTAAAAAA               TTTACG TGA CGTTAA               GCGGCGGTATTCTAC  72 75
        rpsO 4216572 .. 4216588 - -10.8  -5.00616   GTCTGGTTGAAAAAA              GGGGCC ATGAA GGCCCC              CTCTTTCTGAAACTC 100 48
   CKO_04562 4214196 .. 4214217 - -17.3  -2.71712   CCTGCCGGGTCAAAG           GCCCTCCGC CAAA GCGGAGGGC            AAATGGCAACCTTAC 100 37
   CKO_04561 4213176 .. 4213201 -  -7.5  -4.04023   ATTAACGAACAACAA         CGCCCTCACCC GTGA AGGTGATGGCA          ATCAAAAAGATTACG  73 59
   CKO_04559 4211092 .. 4211114 - -10.6  -6.11392   AAAGAAATAAAAAAA           GCCCCGAT CGCAATC ATCGGGGC           TGTATATTTTACTTT 100 69
   CKO_04558 4209732 .. 4209743 -  -7.2  -3.30124   GTTCAGGCCGGATAA                GGCG TAGC CGCC                 ATCCGGCACAACAAA  61 42
   CKO_04556 4208337 .. 4208355 - -10.2   -4.4078   CCGCGCCAATGAAAA             CGGCAGCG CGC CGTTGCCG             CTGGCCGCGCACAGC  93 132
   CKO_04552 NONE
   CKO_04551 4205223 .. 4205236 -  -3.7  -3.97602   CAAGAGACTCACAAA               GCGCC AGAA GGAGC                GACTCGTGACAGAAG  58 86
   CKO_04548 NONE
   CKO_04547 4203755 .. 4203781 -  -4.3  -3.22906   GGATGGGGACAAAAT        GCCCGGT-GGCG CTCG CGCTTATCGGGC         CTGGAGGACGCCACG  49 91
   CKO_04545 4202451 .. 4202461 -  -2.4  -4.41494   GAGCGTGAATCAAAA                 GCCG CTG CGGA                 CATCGCCAGCCGGGT  62 183
   CKO_04540 4197918 .. 4197944 - -10.3  -4.58283   TAATCCCTGTAAAAA        CAGTGTTATCCC CACC GGG-TAACACTG         TTTTCCCTCTGATGC  93 83
   CKO_04529 4186563 .. 4186593 - -19.8  -4.77036   CCTGATGACGAAAAA       GGCCGGATGGGGAT CGC ATCACCATCCGGCC       TTTTACAGATAACTG 100 43
   CKO_04528 NONE
   CKO_04526 4184742 .. 4184752 -    -4  -3.09492   TGCTCAATTTTAATA                 TTCA CAA TGAA                 TAATATTTTGAGCAT  47 16
   CKO_04525 NONE
   CKO_04523 NONE
        garR 4182809 .. 4182820 -  -7.2  -3.32844   CCTGTTACTGCACAA                CGCC GGAT GGCG                 TTTCACTTATCCGGC  61 87
   CKO_04521 4181195 .. 4181222 -   -15   -3.7795   CCAAACGCTATGAAA        GCAAAAACCCGC CGAA GCGGGTTTTTAC         ATGAAGAGGTGAAAC 100 443
   CKO_04519 4180374 .. 4180384 -  -2.6  -5.02074   TTATTTTTTAAAAAA                 TAAA TCA TTTA                 TTATCAATAAGTTAA  72 436
   CKO_04518 4179260 .. 4179276 -  -5.1  -3.23042   AATAGTCAGTACCAA              CGTCCGA TAT TCAGACA              GATGGCATCAGTTTT  52 63
   CKO_04517 NONE
   CKO_04516 4176775 .. 4176788 -  -2.4  -3.38281   GTACTGAAAACTTAA               TGGA AGACGA TCCA                CAGTTAATCACCAGA  45 92
   CKO_04515 NONE
   CKO_04514 NONE
   CKO_04513 NONE
   CKO_04512 4171273 .. 4171290 - -11.3  -5.58179   GATCACAACAAAAAA             GGTGCAC TAAA GTGCACC              TTTTTATCATGCCAT 100 149
   CKO_04511 4169686 .. 4169700 -  -2.8  -3.05906   AAACATAACAACAAC               CTTACT TTC AGGAAG               ATCAAGCAAATGCCA  43 27
   CKO_04510 4168352 .. 4168365 -  -5.2  -3.68351   GCGCCATCAGGCAAA               CCCG CGCCAC CGGG                TTAATGCGCCTTACT  59 26
   CKO_04509 4167849 .. 4167859 -  -2.4  -5.05782   ATTGAGCTGAAAAAA                 GGCG AGT CGCT                 GAGCTTTCAACTGCA  74 322
   CKO_04506 4166221 .. 4166259 -  -3.1  -4.14243   TACGCCAGGCGAAAA  CCGCTTC-GGGCAGGACC CTAA AATTCTGCCCTGAAGTGA   AGCCGGTAGATGCCT  56 110
   CKO_04494 NONE
   CKO_04493 4155171 .. 4155196 -  -8.3  -3.65135   GCTAAATAACCACAA         GCCTGAT-GGCG CTG CGCTTATCAGGC         CTACAACGACTCCCA  69 259
   CKO_04488 4149558 .. 4149582 -    -7  -2.57931   TGTAGGCCGGATAAG          GCGTTAGCCG TCATC CGGCACACGC          TATTAGCGGCGGCGA  55 28
   CKO_04485 4143869 .. 4143890 - -13.1  -4.50583   AATATTATGACAAAA           CGCTTATCG GCTT CGATAAGCG            TTTGTCGGCAGAAAT 100 55
   CKO_04484 4141889 .. 4141941 -  -4.8  -3.63569   TGAACTGCGTAAGAA CCCGCAGATGAAACG-GGCGCTGGA CAAC TTCAAAGCCGTGTTGGATCTGCGGG TGAATCAGGGCGGGA  55 111
   CKO_04482 4141360 .. 4141376 -  -2.4  -4.39748   CACGATATAAAACAA              TTTTAA TCACT TTAAAA              TCAATGAATTAAACA  61 26
   CKO_04480 4140409 .. 4140428 - -12.1  -4.48072   ATAGTCAGCAGAAAA            CCGGGCC CGCAGT GGCCCGG             TTAAACTTCCACCTG 100 51
   CKO_04478 NONE
   CKO_04476 NONE
   CKO_04475 NONE
   CKO_04473 4136968 .. 4136994 - -15.8  -3.61902   TTTTACCATAGACAA         CCCCTCCGGCCG GAA CGGTCAGAGGGG         AGGAGAAACTGCCTG 100 75
   CKO_04472 4134977 .. 4135011 -  -8.5  -2.61718   TAACCCGGAAAAATT    CGCGGATATCGCCAGG AGCA CCCGGCGAAAGCCG-G     TCTAGTCGTGATGCT  61 27
   CKO_04471 NONE
   CKO_04470 4134565 .. 4134589 -  -4.3  -4.57837   ATACGCCTCTAAAAA          TATGAGTTTCA GTA TGAAACACAAA          TAATGGCCTGTAGAG  69 130
   CKO_04469 4133865 .. 4133888 -   -11  -3.48269   GCCACCAAATATCAA          GGACTTGCGA GAAA TCGCAGGTCC           TTTTTTTTGGGTGGC  82 109
   CKO_04467 4133119 .. 4133136 - -12.7  -3.30474   CCGCATAAGCATCAA             CGCCACC GCAA GGTGGCG              TTTTTTTACCGCTTA  85 38
   CKO_04463 NONE
   CKO_04461 4127344 .. 4127359 -  -7.5  -2.54794   CGAAGGCGAGAAGAT              CCCGC GTAAAG GCGGG               CCGGGGATCACCAAA  53 313
   CKO_04450 4118283 .. 4118304 - -10.1  -2.87931   GCCATCGGGCACATA           CGCATCGCC GGAT GGCGACGCA            AAGCGTCTTATCCGG  69 54
        folB NONE
   CKO_04447 4116203 .. 4116217 -  -4.9  -3.62591   CGGATAAGGCGTAAA               CGCCG CCATC CGGCA               TCAAGCGTTATCAGA  56 36
   CKO_04446 NONE
   CKO_04445 4115749 .. 4115764 -  -2.5  -3.83205   AGCGCGTAGAGCAAA              TCGCC CTGACC AGCGA               GGCCGACGTGCGCGG  52 199
   CKO_04442 NONE
   CKO_04441 NONE
   CKO_04440 NONE
   CKO_04439 NONE
   CKO_04438 4107766 .. 4107794 -  -5.4  -4.56775   ACGGTTGTGCAAAAA       GTGCGCATATCAG TTGC CTGACAT-CACAC        TTTGGGAACAAGCCA  74 84
   CKO_04437 4107441 .. 4107462 - -15.9  -3.32265   CAAGAGTAAAAACCA           CAACGGGCC GTAA GGCCCGTTG            ATATTTTCAGTGTTC 100 32
        ribB 4105964 .. 4105987 - -12.4  -5.56264   TGTAAACACAAAAAA          CCGAAGCCTG CGAA CCGGCTTCGG           TTTTTATTATCATCT 100 79
   CKO_04433 4105137 .. 4105147 -  -5.4  -3.30441   CATCAGCCTGCACAA                 CTTC CCG GAAG                 GTATCGCCACCTTCG  52 449
   CKO_04431 4103806 .. 4103822 -  -7.9  -2.57344   TACCCGGCCTACAAT              TCGTGCC GTA GGCCCGA              CAAGCGTAGCGCCAT  58 51
   CKO_04428 4101609 .. 4101631 -    -9  -3.53091   ACGTCGCGCCGGAAA           CCCCGCAGCA GGA TGCAGCGGCG           GATGGCTATAATGCC  68 59
        nudF NONE
   CKO_04425 NONE
   CKO_04424 NONE
   CKO_04423 NONE
   CKO_04422 4095220 .. 4095232 -  -7.7  -3.65812   GTTGCCCGAAGATAA                CGTCA ATA TGACG                GAGATTGGCACCGGA  65 431
   CKO_04420 NONE
   CKO_04419 NONE
   CKO_04418 4090096 .. 4090121 -  -9.7  -2.71791   AGTTTTGCGCTAAAT         GCCGGAT-GGCG CTT CGCTTATCCGGC         CTACAGCGCATTCCC  68 103
   CKO_04413 4086467 .. 4086484 - -14.1  -5.38958   AGTCACAAAGAAAAA             GGGCCGC GAGT GCGGCCC              TGATGGGGTTTATTT 100 35
   CKO_04412 4084048 .. 4084059 -  -7.2  -3.30124   CCGCAGGCCGGACAA                GGCG TTTA CGCC                 GCCATCCGGCACAAT  61 70
   CKO_04411 NONE
   CKO_04410 4081601 .. 4081620 -  -2.8  -3.90588   TATGCCGGAACGAAA            GAGAAAGG TATT CACTTCTC             GCCCTTGCGGGCGAG  54 48
   CKO_04409 4079268 .. 4079287 -   -15  -4.77036   GCGGATGACGAAAAA            CTGGCGGC GCTG GCCGCCAG             AATTCGTGAAGCGAA 100 105
   CKO_04404 4075072 .. 4075089 -  -4.7  -2.79183   CTTATTCTGACGACA             GCCGCCA GTCT CGGCTGC              TGGCTGAGCTATATT  45 484
   CKO_04401 NONE
   CKO_04400 4072048 .. 4072075 -   -17   -5.4833   TCAGGCAATAAAAAA        GCCGGGTACGGC TTGC GCCCTACCCGGC         CTGTCTGTCTGCCCA 100 54
   CKO_04397 4070250 .. 4070268 -  -3.1  -2.92192   GTTTACTCAATGAGA            TGG-CGCA ACGT CGCGGCCA             GTCAATGGCGCAGAT  42 294
   CKO_04395 4068335 .. 4068350 -    -9  -3.64915   GCTTATAAAGCATAA              CGGCAT TATT ATGCCG               CAAAGCAATATGCCG  72 64
   CKO_04394 4066538 .. 4066555 -  -4.8  -3.41602   TTTACCGGATCAGAA             GGCGAC CCATTC ATCGCC              TGACTTCGCGGCAGA  54 2
   CKO_04392 4066139 .. 4066155 -  -2.1  -4.00348   GTGTAATTAATTAAA              CCGGGGT AAT ACCCCCT              TCGGATCAATTTTCG  53 31
   CKO_04391 4064812 .. 4064825 -  -5.9  -2.52516   GCGCCCAGCAGCAAT               GCCCC GCCA GAGGC                TGCTTTAATAAAGTT  49 55
   CKO_04390 NONE
   CKO_04389 NONE
   CKO_04388 NONE
        hybD NONE
   CKO_04386 NONE
   CKO_04385 NONE
   CKO_04384 4059340 .. 4059356 -  -2.9  -3.43853   GTAAGGATTTAAACA              TGGGAGA TGT CCTCACA              ATCGATATATATATT  47 89
   CKO_04383 NONE
   CKO_04382 4057495 .. 4057517 -  -6.2  -3.74475   ACAAACCGAAGATAA           GCGTCAGAGC TAA ACCGTGACGC           CGGATGAGATTTTAA  64 113
   CKO_04380 4054044 .. 4054088 -  -8.6  -3.38812   GCCTGCTCAATAACA CTAACCGGACAGAGGTCGAT TCATC ATACACCTCTACCCGGCCAG ACGGCGCACAGAGAC  67 65
   CKO_04379 4052103 .. 4052115 -  -2.6  -3.28712   GGCTCTTTTTCAGAA                GAGG CTATT CCCC                TTTTTCCACAATTAA  45 17
   CKO_04378 NONE
   CKO_04377 4050719 .. 4050746 -  -8.4  -3.98661   CACAGGGAGTACAAA        CGCCTGTTTGGCA TCA CGCCAATC-GGCG        ATAAAGTGCAGTCGC  74 148
   CKO_04374 4048023 .. 4048050 -  -5.4  -4.08064   AAGGCGTGCTGAAAA        CCATTGGCGGAA ATAA TGCCGCCACGGG         CGTGGGGATCCAATT  65 263
   CKO_04366 4037957 .. 4037972 -  -6.2  -3.70902   GTCTGTATACTTAAA              TGAGAA TCAC TTCTCA               CTAGATTTGCCTGCT  64 384
   CKO_04365 4037042 .. 4037093 -  -4.4  -3.02549   AGGAACATAATCATA CTCCTTCACCTCCCTCTCTCCT CCTCTCCC AGGAGAGGGGGAAGTGAAATTT TTTTATTCGTAATTC  47 28
   CKO_04364 4036295 .. 4036312 -  -2.7  -3.41738   TTCTGAATAAATACA             TTACACG ATGC CCTGTAA              GTCAACAGCCAGTAC  47 46
   CKO_04363 4033990 .. 4034008 -  -2.4  -4.99035   GGATCGAGAGAAAAA            CGTC-GG AGGCAA CCAGACG             GTCACCATCACGGGT  74 465
   CKO_04356 NONE
   CKO_04355 4028242 .. 4028253 -    -3  -4.36903   TTTATCAAAGAGAAA                GAAA AACA TTTC                 CAGATTATTGATATA  60 178
   CKO_04354 4027911 .. 4027925 -  -2.2  -3.39595   CTCAACCAGTTAGAA               TATAAA AAA TTCATA               TATATCATCCTATTT  45 47
   CKO_04353 4027420 .. 4027434 -  -5.7  -3.29263   ATAGCTTCCGGATAA               CGCTT ACAAA AAGCG               TCAGCGATCCCGACA  54 84
   CKO_04352 4027068 .. 4027078 -  -3.2  -2.69813   ACCATAGATCAGAAT                 CCAT ACA ACGG                 TTCCCCGTCCATAAT  41 8
   CKO_04351 NONE
   CKO_04350 4025952 .. 4025968 - -10.9  -3.99324   CTGGATGATGAGAAA              TTCAGCG TCC CGCTGAA              CTCTGCCGTCATTCT  83 523
   CKO_04347 4025388 .. 4025400 -  -3.3  -3.71627   TGAGTAACAGAAAGA                CGGTC AGC GACTG                TTTATTTTCGCATTA  54 43
   CKO_04346 NONE
   CKO_04345 4024508 .. 4024522 -  -4.2  -4.07568   GTCGTCTGCTGAAAA               TAACGC GTA GCGTTT               ACTATGCATCGCTAA  61 234
   CKO_04341 4022283 .. 4022293 -  -8.2   -4.6902   TCATAAGCGCAAAAA                 CCCG TTT CGGG                 AGAATAGAAGTCCCG  84 110
   CKO_04340 4019829 .. 4019844 -  -8.2  -2.72511   GGTACGCCCTGAAAT              CCGCGC CAGT GCGCAG               GGCATGTTCCTGATG  57 317
        trmB NONE
   CKO_04334 4014820 .. 4014841 - -11.5  -3.11024   TCCCTCAAGACAAAT           CGGGCCAGC AAAT GCTGGCCCC            GTATGCTTTATTAGT  75 36
   CKO_04333 4014046 .. 4014067 - -12.3  -4.75289   TATGACAACATAAAA           CGGCACAGC AGGC GCTGTGCCA            TAGACAAGAGTTTTA 100 38
        ansB 4012446 .. 4012458 -  -6.2  -4.30576   TGCGTACCACTAAAA                CGCG TCACC CGCG                CGGTTATATGCAGGG  71 418
   CKO_04326 NONE
   CKO_04325 4008019 .. 4008057 -  -3.8  -3.53224   GAGCGTTTGCTGAAA   GAGTGGCAGCCGGA TGAAATTATTG TCGGGCTACCGCTC   AATATGGATGGCACA  51 17
   CKO_04316 NONE
   CKO_04315 3997987 .. 3998021 - -13.6  -5.92337   ACAGATGAAAAAAAA     TCCCCTCCGCGTCG TTAAACC CGACGAGGAAGGGA     TTGATTCGTAAATCG 100 5
   CKO_04314 3996986 .. 3997010 - -12.9  -4.27316   TCTTTTAAGTTAAAA          CCCCTCTCC TGATGAC GGAGAGGGG          GAAGCACTTATTCGC  95 33
   CKO_04312 3994722 .. 3994743 -  -2.9  -5.33405   GGTATTAAATAAAAA           CGAGAGCAA CATG TAGCTCTTG            TTAGCTGTTCCGTTC  79 176
   CKO_04311 NONE
   CKO_04309 3991652 .. 3991671 - -12.8  -5.24129   TTCCTTTATAAAAAA            CGGGCCGC CTGA GCGACCCG             TTCGGTGTTGTATCG 100 44
        cmtB 3990916 .. 3990927 -  -4.4   -3.4811   TGTTCCATAATAATA                TCCT GTAG AGGA                 GAAATTAATTATGCG  53 34
   CKO_04307 NONE
   CKO_04306 NONE
   CKO_04305 NONE
   CKO_04304 NONE
        frcK 3985575 .. 3985590 -  -3.9  -4.74103   TGCGCAACGCAAAAA              CCGCG AACGCG CGCAG               ATTCTCGGCGTGCTG  72 435
   CKO_04297 NONE
         pgk 3980300 .. 3980319 -   -15   -3.6914   ACGGCAATAAATCAA            CGGGCAGG AATC CCTGCCCG             TAACGATTACTTCTT 100 32
   CKO_04295 3979104 .. 3979123 - -12.2  -5.75945   ATCCGGCAAAAAAAA            TGGCTTCC CGAA GGAAGCCA             TTTTTACAATCAGCA 100 48
   CKO_04291 NONE
   CKO_04290 NONE
   CKO_04289 NONE
   CKO_04288 3973423 .. 3973441 -    -3  -3.28791   AGTCGCCTGCGAGAA             GCGGCTGT GTA ACGACCAC             TCACCATCGGGAAGT  45 26
   CKO_04287 NONE
   CKO_04286 3971680 .. 3971693 -  -5.3  -4.10795   TCAAAAAAACGCAAA               TGAGA TCAT TCTCA                CGAAAACGACCTTTT  64 107
   CKO_04285 3970746 .. 3970786 -  -3.8  -4.30995   CGGCCTACAAAACAA CCTGTAGGCCCGGTAAGCG ACAG CGCC-ACCGGGCGAAACGG  CTTATTCCGCGTTCT  64 27
   CKO_04283 3969953 .. 3969971 -    -3  -3.54475   TTGTCCATCAGACAA             CGCTTAGT TGA ACAATGCG             TGAACGTGTGCAACC  49 10
   CKO_04282 3969041 .. 3969052 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCCATCCGGCAATTT  61 107
   CKO_04280 3967201 .. 3967216 -  -3.2  -4.28254   GGGCAACATCCAAAA              CGTGAC ACAA GTCACC               AAATTTGCCCTGCCA  60 77
   CKO_04279 NONE
   CKO_04278 3965403 .. 3965415 -  -4.1  -4.09739   TGAATCGTCTGAAAA                TTCAG GAA CCGAA                GCTGGACGTGCGTGA  60 377
   CKO_04274 NONE
   CKO_04273 3962398 .. 3962413 -  -2.6   -3.9461   CGCCGCCAACAATAA              TCACGCT CAT AGC-TGA              CGCGCCGCCGCCATT  54 16
   CKO_04272 3961119 .. 3961157 -  -6.1  -3.55899   AGGACAATCAAAAAC  CGTA-GGCCGGATAA-GGC AAA GCCACTATCCGGCATTACA  TTACTTCCGCGGCAT  61 97
   CKO_04271 3959467 .. 3959493 -  -8.8  -2.82623   CGGGGCTTACAACCA         TTTCATGGTGAA ATC TTCGCCACGAAA         CCCGGCGTCGCAGCC  60 416
        gcvT 3958341 .. 3958361 -  -8.9  -2.84946   AAAAAGGATGAATCA            CGCGACGGC TTT GCCGTTACG            CACAAAAACAGGTTT  65 2
   CKO_04268 3957845 .. 3957876 -  -7.2   -2.7094   GGCGACGCAGAGAAC      CCCCAGGAGCTTAC CTAA GTAAGTGACTGGGG       TGAGCGAGGAAGCCA  55 72
   CKO_04266 3954782 .. 3954808 - -14.5  -6.09888   TCCGAATAAAAAAAA        GCCGGGT-AGCG CTTG CGCTTACCCGGC         CTACAGCATGGCAGA 100 45
   CKO_04263 3951923 .. 3951948 -    -2  -3.60805   ATAGCTTACTCCAAA        GAACG-T-TCAC AATC GTGATAGCGTTC         CTAGCGTAACTGAGA  47 148
   CKO_04262 NONE
   CKO_04261 3950671 .. 3950686 - -10.4  -3.38812   CGGCGCTGAACAACA              GCCAGC AGTG GCTGGC               GCTGGATATTGAAGC  73 416
   CKO_04259 3949542 .. 3949555 -  -4.5  -3.30159   CCAATGCGGCGACAA               GCCCA TGAA TGAGC                AAAGAGAGCCATTGT  51 62
   CKO_04258 3949073 .. 3949083 -  -5.4  -2.83403   CTGGTGCGAGCAAAT                 TCTC GGT GAGA                 TGGCAGAGCACTATT  50 146
        xerD NONE
   CKO_04255 NONE
   CKO_04254 3945062 .. 3945088 -  -5.9  -3.38966   AAAATGCAGTGATAA        GAGCG-GAATTC TACC GGATTCGCGCTC         TCATTAATATACTGT  56 43
   CKO_04252 NONE
        lysS 3942355 .. 3942384 -  -7.1  -2.75081   GAGGTGCAAAACGTA       GGCCGGATAA-GGC GAA GCCACCATCCGGCA       TCTCACGTCTTATTT  55 35
   CKO_04249 3940684 .. 3940694 -  -5.4  -2.87881   GAACCCTCGTATAGA                 GCTT GGG AAGC                 TCTCGTTCTACCATT  50 133
   CKO_04243 3935580 .. 3935604 -  -8.5  -2.77899   TTTCGCTAGTAAGCA          TAGCCCCGTCA AAG TGGCGTGGCTA          CAGGAAAACAGAGGC  62 82
   CKO_04242 NONE
   CKO_04241 3934986 .. 3935005 - -11.4   -3.6422   GAGCGCCGGAAAATA            CCGTGGGC AGAA ACCCACGG             CGATGACCGGTAAAA  82 45
   CKO_04234 3928346 .. 3928356 -  -3.2  -4.37092   ATTCCGCGCAGAAAA                 CACG CTT CATG                 CGAACAAAACGCACT  62 361
   CKO_04233 3928081 .. 3928105 - -10.8  -3.85698   GCCTTTTTCCACAAA         CGTGCAGCGAC CCAA GT-GCTGCACG          TCCGTTCATATCAAT  84 31
   CKO_04229 3926640 .. 3926686 -  -2.5  -4.44245   AGAGGATCGAGAAAA GAATGGGCGGGAA-G-ATAAACA CGC TGTTTATTCATTCGCATCCACTC TCCAATGAAAAAGCC  62 136
   CKO_04227 NONE
   CKO_04226 3924176 .. 3924205 -  -7.7   -4.6821   AATCTCAATACAAAA       CGGCTCATCCACC TGAA GAGGGGCGAGCCG        TTTTACTCAGTCTTT  82 44
   CKO_04223 3921321 .. 3921334 -  -2.4  -2.60032   GCTTGTTTAAAAATG               GTGA GTTTTA TCAC                AAAGGAAATTGCAGC  39 45
   CKO_04222 3919960 .. 3919981 -  -7.3  -4.64861   GCTCCTGAAAAGAAA           CGCCGGATTG CTG CAACCCG-CG           GCGTCAGGGAGGGGA  80 112
   CKO_04220 NONE
   CKO_04219 3917733 .. 3917746 -  -3.7  -4.62471   GTGAATTTCGAAAAA               GGCGC AATC GGGCC                GTTGCACAATCATCC  69 299
   CKO_04217 3916535 .. 3916574 -  -3.4  -3.53444   GGATGGTCGTGGAAA  CCCACAGCGCGGCGTCG GTTTGCG CGATGGTGCGC-GCGGG  CGCCGGGCTTTCGGT  51 238
   CKO_04216 NONE
   CKO_04214 3913964 .. 3913982 -  -2.4  -4.82901   GGCGCTGGAGAAAAA            CGGGATC GACTGG GA-CCCG             GCGAAAGTGAAATAC  68 521
   CKO_04212 3912013 .. 3912031 -   -11  -5.81032   TAAGCGCAAAAAAAA             CCTGCACA TGA TGCGCAGG             TTGGTGTAATTCTTG 100 220
   CKO_04208 NONE
   CKO_04207 3908292 .. 3908322 -  -8.1  -3.30124   CCGTAGGCCGGATAA       GGCACCTGCGCCG CCATC CGGCGCTTCTGCC       TGATGGCGCTGCGCT  67 67
   CKO_04204 3905514 .. 3905545 - -10.9  -3.06261   CGCTAACCGGCAACA      GCGG-CGTGACGTG GGAAA CAAGTCACGTCCGC      CACAAATTAAAACGC  69 458
   CKO_04200 NONE
   CKO_04199 3901687 .. 3901698 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG CGTG CGCC                 GCCATCCGGCAATCA  61 56
   CKO_04195 NONE
        thyA 3899501 .. 3899520 - -10.7  -6.00086   ACAGGATAAAAAAAA            CCGACGC GCAAGG GCGTCGG             TTATGACAGGATGAG 100 47
   CKO_04193 NONE
   CKO_04191 3898311 .. 3898323 -  -2.6  -2.83894   AGCACCATCACCAGA                GAGG ACACA CCCC                GTTCACGTTTCACAG  42 35
   CKO_04190 NONE
   CKO_04189 NONE
        recC 3894176 .. 3894190 -  -4.2  -4.13767   TCTCTTATTGTAAAA               TCAGTC CGT GACAGA               AAACGCATCATAAAT  61 75
   CKO_04187 NONE
   CKO_04186 NONE
        recB NONE
        recD 3885743 .. 3885786 -  -8.9  -3.60296   GACGGCGACGCTAAA GCGTCTTATCGGGTCTACGG GGATG CTGTAGGCCAGATAAG-CGC AGGCGCCATCCGGCA  72 48
   CKO_04182 3882876 .. 3882889 -  -5.9  -5.75342   GGTCCGTAAAAAAAA               GCGCC TTTC AGCGC                TTTTTTATTATCCCC  89 33
        mltA 3880989 .. 3881007 -  -3.1  -3.38316   CCATCAGGCAATCAA             CCGCTAA ATACG TTACCGG             TTCCCGGGGCGTTTT  47 3
   CKO_04177 NONE
   CKO_04176 3879953 .. 3879985 - -12.8  -3.14344   GAGGCTGCCCAGCAA     GCCGGATGACGACGC TGAT GCGTCTT-ATCCGGC      CTACAACACCGCACG  81 79
   CKO_04173 3877841 .. 3877859 - -11.7  -2.57423   ATAGTGATTAATGTA             GCACCGC CAATT GCGGTGC             TTTTTTTTGTCCATG  76 50
   CKO_04171 NONE
   CKO_04170 NONE
   CKO_04169 3875056 .. 3875075 -   -10  -4.18934   TATCAGGCCAACAAA            TACCCGGC GCAG GCCGGATA             AGGCATTTACGCCGC  83 60
   CKO_04168 NONE
   CKO_04167 3873683 .. 3873697 -  -3.5  -3.58343   TGGATGACGCGGAAA              CCACCG TCGC CGG-GG               CCGCCATGTTCGGCT  51 481
   CKO_04164 3871788 .. 3871808 -    -4   -3.1634   TGGGAAATCAGCCAA           CAGG-AAGC GGAC GCCTGCCTG            GCCGCTACCGAATGG  47 522
   CKO_04159 NONE
   CKO_04157 3866702 .. 3866730 -  -8.2  -2.53995   ATCGACGGGAACTTA       CAGCAGCTACGGC TGAC GCGGTAGCTG-TG        TTGCCGGGTGGCGCT  61 101
   CKO_04153 3862991 .. 3863004 -  -3.1  -5.07941   AAAATTATATAAAAA               TCGTC ATTA AACGA                ATTTCATTTTACGGT  72 52
   CKO_04149 3859163 .. 3859175 -  -6.3  -2.53876   CCCGATGTGAATCGA                CTTCA TCC TGAAG                TATCCTGGCCATCCT  52 426
   CKO_04147 NONE
   CKO_04146 NONE
   CKO_04145 NONE
   CKO_04144 NONE
   CKO_04143 NONE
   CKO_04142 NONE
   CKO_04141 3852817 .. 3852843 -  -5.8  -3.46563   CATACACCAGGAGAA         GAACCGACCCCA TGA CGAAACCGGTTC         AATACAGTCAGCGCA  56 33
   CKO_04140 3851563 .. 3851616 -  -6.1  -3.30124   CCGTAGGCCTGATAA GCGCAACG-TGACC-GGCCTACAGGT GCGTG ACC-GTAGGCCTGATAAGCGCAGCGC CATCAGGCAGTTAAC  59 36
        rumA 3847348 .. 3847376 -  -2.4  -2.52464   CCTCTCCTTAAGGGA       CCA-GGCCTACCG AAGT CAGCAAGCCATGA        CTCATTACAAACGCT  39 30
        relA 3845005 .. 3845017 -  -6.9  -3.30243   ACGTAGGCCGGATAA                GGCGA CAG CCGCC                ATCCGGCAACTGGCA  61 103
        mazG 3844085 .. 3844100 -    -4  -4.81359   AACGGAAAGAGAAAA              TAGCCCC TTT GGGG-TA              AATGTTTTTGACGTA  73 98
        pyrG 3842135 .. 3842159 - -18.7  -4.08164   AAAACTCCAGACAAA          CAACGCGTACC TTT GGTACGCGTTG          CCGTTCTAACTTTTT 100 48
         eno 3840752 .. 3840765 -  -9.5    -5.626   CACGCCATAAAAAAA               CCCGC CGGA GCGGG                TTTTTTACGTTAAGA 100 54
   CKO_04133 3839954 .. 3839972 -  -4.4  -3.17075   GGCCGGGCAAGCGAA             GCGCCCCC GGC AAGCGCGC             TAACGATTTTTTATC  49 39
   CKO_04130 NONE
   CKO_04129 NONE
   CKO_04128 NONE
   CKO_04127 3832964 .. 3832975 -    -3  -3.12668   CCTTAAACGCTAACA                GAAT GTTC ATTC                 ACACCTCCCTGTCTT  45 1
   CKO_04126 NONE
   CKO_04125 NONE
   CKO_04124 3831155 .. 3831168 -  -5.2  -3.76492   CGCAATGCGATGAAA               GCCG GTGTGG CGGC                GCTTTCCACCACCAA  58 57
        cysJ NONE
   CKO_04117 3824784 .. 3824795 -  -5.8  -3.87815   CGTTATTCCCAGAAA                TCCC GGGC GGGA                 TCGAGCACCGGGCGA  63 1
   CKO_04116 3823816 .. 3823862 - -11.1  -3.86346   GGATGGCGGCATAAA TGC-CTTATCCGGCCTA-CAGAC ACT GTCTGGTAGGCCTGATAAGCGTA GCGCCATCAGGCAAC  87 98
   CKO_04113 NONE
        cysN NONE
   CKO_04111 NONE
   CKO_04110 3819004 .. 3819030 - -10.2  -2.57881   GAATGCCGCGACAAC         GCGGGCAAATGT ACC ACATTTATCCGC         CGATCCGCATATCTC  70 122
        ftsB NONE
        ispD 3817846 .. 3817859 -  -3.1  -3.08133   CACTTACTTATGTAA               GC-TCC TGG GGATGC               ACTCAGTTGCCGCCT  43 66
        ispF NONE
        truD NONE
        surE NONE
         pcm 3814691 .. 3814703 - -10.5   -2.6415   GAAACCAGCGACAAT                GCCGC AAT GCGGC                TAACGGTGAATTTTG  66 195
        nlpD 3813547 .. 3813559 -  -3.3  -3.35996   TATTCTGACTCATAA                GGTGG CTC CTACC                CGTGATCCCTGGACG  49 73
   CKO_04101 3812512 .. 3812531 - -13.6  -5.27938   ACGGCCAAAGAAAAA            GGCCAGTC TCAC GACTGGCC             TTTTTTTGACGAATA 100 46
   CKO_04100 3812305 .. 3812319 -  -2.7  -4.05446   CCGGCGAAGGAGAAA               CGCTG CTGAC CGGCG               CCATGCCGTTGGGGG  56 95
   CKO_04098 NONE
   CKO_04097 NONE
   CKO_04096 3809494 .. 3809519 - -11.1   -3.0771   GTGTAAATCAGAAAC         GCCCGGT-GGCG CTA CGCTTACCGGGC         CTACAAGAAGCATCG  75 87
   CKO_04094 3805345 .. 3805360 -    -4  -3.34344   TCACGCCTGAAGGAA              GACGCGA TTA TCG-GTC              TTATCTTCTCCTCTT  51 524
   CKO_04089 3802513 .. 3802543 -  -8.2  -3.17194   ACTCTGGCAAGCGAA       GATTGCGGCCTGAA GTT CTCCGCCCGCAACC       AGTTTGCCGGTAGCG  62 293
   CKO_04081 3795374 .. 3795387 -  -3.1  -4.59511   AACATGTCTGAAAAA               TGTCA TTTT CGACA                CTTATCGACATTCCC  67 108
   CKO_04080 NONE
   CKO_04078 NONE
   CKO_04077 3791966 .. 3791984 -  -3.7  -2.90992   AACTCTCTTAAATCA             CGCCACC AGCAA GGAGACG             AATGCTAAAAACGCA  44 4
   CKO_04076 NONE
   CKO_04075 NONE
   CKO_04074 NONE
   CKO_04073 NONE
        hycI 3788024 .. 3788060 -  -3.6  -4.37092   ACCCGGCCTACAAAA   CCGTAGGCCCGGTAAGCG TAG CGC-CACCGGGCAC-CTG   CTCAGAGCGGAGAAA  62 27
   CKO_04069 3783794 .. 3783804 -  -2.4  -3.83756   AAATGACAATGTAAA                 GCGG GAT CAGC                 GGGCAGGCAGCGGCG  53 21
   CKO_04068 3783071 .. 3783088 -  -6.3   -3.1372   CATCCGGCATGAATA             CCGCCGTA TTT TACG-CGG             TTTTTCAGGAATCAG  57 37
   CKO_04067 NONE
   CKO_04066 3780046 .. 3780061 -    -6  -3.53012   GCCTGCGCCCGGAAA              CCGCGC TGGC GCGCCG               TGCCGGGTTGACCAT  57 425
   CKO_04063 3776119 .. 3776132 -  -4.5  -4.25104   GGTGGTGGATGAAAA               CGGTA AACT CACCG                GCGCAATCAACCTGC  66 66
   CKO_04055 3769668 .. 3769682 -  -5.8  -4.81212   CGCACCACAATAAAA               TGTTAT AAC ATAACA               ATAATAAAATACGAT  78 194
   CKO_04054 NONE
   CKO_04053 NONE
   CKO_04052 3767111 .. 3767130 - -13.6  -5.24531   AGGCTTCAGAAAAAA            GCCGATGC GAAG GCATCGGC             CGATCGTACGGTTAT 100 37
   CKO_04051 3766496 .. 3766511 -    -4  -2.78816   TTAGGTGCGATTATA              CTGTAC AGTC ATACAG               TATCAAGTGTTTTGT  46 28
        recA 3765277 .. 3765297 - -10.4  -4.88295   AAAGAAATGCAAAAA            GGGCCGCA AGATA TGCAGCCC            TTCAAAGTATAAGCC 100 81
   CKO_04049 NONE
        alaS 3761943 .. 3761966 -   -16  -3.65827   TAACGTTGATGCAAA          CGCCGCAGAC CGGG GCCTGCGGCG           TTAGATAACGCTTAT 100 46
   CKO_04047 3761394 .. 3761410 -  -4.3  -4.22927   TTATCAACAGATAAA              TCGGCGT GTT ACACCGC              CTGAACGCAGGCAGA  64 177
   CKO_04040 NONE
   CKO_04039 NONE
   CKO_04038 3757361 .. 3757377 -  -2.2  -4.65263   ATTTTTTAAAATAAA              CTGAAC TCTTC GTTCCG              GGGCGAGTCTGAGTA  63 125
   CKO_04036 3756695 .. 3756715 - -14.1   -5.5112   CGCATTAATAAAAAA            GCCAGTTCA TGA TGAACTGGC            TTTTTTTTTGCCGGA 100 122
   CKO_04020 3740725 .. 3740735 -  -8.2  -3.46285   GATGCCAAAGATGAA                 GCGG AAA CCGC                 GCGGCGCAAAGCGCA  64 249
   CKO_04018 3739684 .. 3739696 -  -3.4  -2.91383   ATGTTGATCGAGATA                TTCC TCTCT GGAA                TGACCTTTGAACAGT  42 409
   CKO_04015 NONE
   CKO_04014 3738641 .. 3738666 - -11.2  -2.62263   ACCTGGTTGATATCA         GCCGGATAAG CACCGT CTCATCCGGC          AAAATACCGCGAAAT  73 40
   CKO_04012 3737058 .. 3737077 -  -6.4  -4.17556   CATATGCTCAACAAA            CTGGAATC GAGC GATGCCAG             CGAACGTATGCTGGA  67 354
   CKO_04005 NONE
   CKO_04004 3728305 .. 3728333 - -17.5  -2.53015   ATATCGGCTAACGGA        TTGCCGGATGGTG TTG CGCCATCCGGCAA        TCATCACTGTCGCGC 100 29
   CKO_04000 NONE
   CKO_03999 3723057 .. 3723070 -  -9.5  -5.34555   TGACATGAGAAAAAA               GCCGC TAAT GCGGC                TTTTTTTATTCCAGC 100 81
   CKO_03997 NONE
   CKO_03996 3720345 .. 3720362 - -11.3  -4.27316   TGCGTTAATTCAAAA             TGCCCCT TTAC AGGGGCA              CAAACGCAATGCTTT  91 64
   CKO_03994 NONE
   CKO_03993 NONE
   CKO_03992 3715517 .. 3715527 -  -2.6  -3.56568   TAACGACCCCTTAAA                 TAAA ACA TTTA                 TTTCATTTTTATAAA  49 50
   CKO_03991 NONE
   CKO_03990 3713517 .. 3713536 -    -5  -2.90496   GCTCCGGGCAAATCA            GTTACCGGC TTC GCCGATA-C            GCTCGGCCTGTTGCA  49 3
   CKO_03989 NONE
   CKO_03988 NONE
   CKO_03987 NONE
   CKO_03986 NONE
   CKO_03985 NONE
   CKO_03984 3706039 .. 3706060 -  -5.7  -5.10154   AGCGAAAAGCAAAAA           GCCCTCAGC ATAC GCCAGGGGC            TTTTCTATTTATCGC  82 45
   CKO_03982 NONE
   CKO_03981 NONE
   CKO_03980 NONE
   CKO_03979 NONE
   CKO_03978 3700188 .. 3700202 - -11.4  -2.72344   CGCTATGGCCAATCA               GCCGCA TAT TGCGGC               TATAGTCGGGGCGCG  73 96
   CKO_03976 3698633 .. 3698667 -  -6.9  -4.42386   TGGCGACGGAGAAAA     CTCGCGACGCGGCGC TACGC GCGCCGGGCTACGCG     TCGGAATTTCTGAAA  75 347
   CKO_03974 3696075 .. 3696091 - -10.1  -2.79671   AGCTCAACGCGAAAG              GCGTCCG CTT CGAACGC              TGGGTTGCAGACCGC  64 499
   CKO_03968 3692502 .. 3692523 - -10.1  -4.19746   TGCACTTTAAAAGAA           CCCCAGATC TCAC GGTCTGGGG            TTTTTCTATTTGTAA  87 287
   CKO_03965 3691180 .. 3691198 -  -7.5  -6.10489   AATCGCAAAAAAAAA             GCATCAT TTACG ATGATGC             TTTTGGTTTCTTTTT 100 72
   CKO_03964 3690260 .. 3690291 - -10.4  -4.13014   CTTACAGGTCGAAAA      TTTATAATATCCCT CTAG AGGGATATTATAAT       CCTTTCTTTTCACTT  87 156
   CKO_03963 3688855 .. 3688883 -  -6.1  -2.53263   TTTACTTTGAAGTTA        CAATCTTTGGTTT CAA AAACCGAATATTG        ATTTTCTTGAAGTTT  52 9
   CKO_03962 NONE
   CKO_03961 NONE
   CKO_03960 3685447 .. 3685460 -  -5.3  -3.85698   GTTTTTGTCCATAAA               TTGCA TCCT TGCAA                GTTAGTGTTGTCTTC  61 103
   CKO_03959 3684997 .. 3685012 - -10.4  -4.74518   AATTATTAAAATAAA              GCTCCC TTTC GGGAGC               TTTTATAATCTAACA 100 28
   CKO_03954 3681405 .. 3681423 -  -3.8  -2.77283   TTATCAAGAAATTTA             TCCCATTT TAA AAACGGGT             GCTTTATTCTCTCCT  44 4
   CKO_03952 3680924 .. 3680968 - -12.4  -3.56972   ACCCCATTAAATTAA GCAAGAGCTAACTCAGAGATGC TCC GCTTCTCTAAGTT-GC-CTTGC TTTTTCTGCTCTTTG  88 163
   CKO_03951 3680224 .. 3680255 -  -8.9  -3.40878   AGCAGCTTAATAATA      TAACCAGTGAG GAAATATTAA CTCACTGGTTA       CTACAAAGGAAAGAA  70 415
   CKO_03946 NONE
   CKO_03945 3674627 .. 3674638 -  -4.4   -4.1822   GCCCATTCGAAGAAA                GATG AAAT CATC                 GCAGCCTATAATCGT  62 281
   CKO_03941 NONE
   CKO_03940 3671378 .. 3671392 - -11.4  -5.00616   TCTGGTGTTAAAAAA               GGTGCC ATT GGCACC               TTTTTTAATTATTGA 100 101
   CKO_03936 3667466 .. 3667510 -  -2.9     -3.81   AGTATCTCAGAATAA TGTTGTAG-GCCGGGTA-CGGC GAAT GCCGCCACCCGGCACTACGG-A TGGCAAATTACGCTT  52 33
   CKO_03933 3663618 .. 3663651 - -15.3  -4.63218   CTTGTGTGAATAAAA     CACCCAGGCCCCATC GAGG AACGGAGCCCGGGTG      TCATATTAAAAGCCC 100 218
        rpsP NONE
        rimM NONE
        trmD NONE
        rplS 3661526 .. 3661547 - -11.5  -5.82172   ACGAAGATAAAAAAA           GGGCCAGCC AACT GGCCAGCCC            TTTCTTACAGGATGT 100 56
   CKO_03928 NONE
   CKO_03927 NONE
   CKO_03926 3659381 .. 3659406 -  -8.3  -3.34715   CACCGGGCTGAAACA         TGCCCGTATGG ATGG CCATACTGACA          ACTACGGCGAAGACA  64 231
   CKO_03921 NONE
        tyrA 3654398 .. 3654411 -  -8.1  -3.30124   TTGTAGGCCGGATAA               GACGC ACCT GCGTC                GCCATCAGGCATCTC  67 43
        rluD NONE
   CKO_03915 3649644 .. 3649658 -  -5.7  -3.83998   CTACTGGAGATTAAA               TGAGG TCATC CCTCA               ATTATTCAAGGTGAA  63 98
   CKO_03914 3646992 .. 3647009 - -10.5  -5.27335   GTTTTTAAACAAAAA             CGAGCCC GAAT GGGCCCG              TTTTTTATTATTTGT 100 44
   CKO_03909 3640820 .. 3640833 -  -2.5  -3.22818   ACAAAGAAAAGGAGA               TAATA TGGT TATTA                GCATTCGCCGATCGC  43 430
   CKO_03907 3639677 .. 3639692 - -10.4  -5.72622   TTCAGAAATAAAAAA              GGCACC CGAA GGTGCC               TGTTTCAACATGCTG 100 71
   CKO_03906 3637876 .. 3637891 -  -4.6  -2.54896   TGGTGAGTTAAGCCA              GCAGGC GGTA GCCTGG               CAGGGTCAAGAAATC  44 2
   CKO_03905 3636473 .. 3636510 -  -9.9  -2.78018   ATGGCGGAGCAAGCA   CCTTATCCGGCCTAC GGTTCGGG GTAGGCCGGATCAGC    GTAAGCGCCATCCGG  69 47
        aceK 3634624 .. 3634634 -  -5.4  -3.48276   GGCGGGTTTAGATAA                 GCAA GGC TTGC                 CGGATGGCGGCGCAA  58 98
        metH 3629863 .. 3629885 - -13.4  -3.52831   AAAACAATAAAGAGA           CAGGGCGCCC GAT GAGCACCCTG           TTTGTTGTAAGGAAA  90 58
   CKO_03900 3627771 .. 3627793 - -10.6  -3.74347   GTCACAAAGGCGAAA           CCCGCGAACA GCG TATTCGCGAG           CTGCTGGTGGTCGCG  76 308
   CKO_03898 3626104 .. 3626114 -  -3.2  -3.88559   AAGCAGGCTTATAAA                 CCAG ATA CTGA                 GGCGTCGTTTTCCTG  54 71
   CKO_03897 3625770 .. 3625793 -  -2.2  -3.34962   GTGTAGACCTGATAA          GCGTAGCGCC ATCA GGCGCAATCC           GTGCACGTCGCCGGA  45 47
         pgi NONE
   CKO_03892 3620836 .. 3620856 -  -6.9  -3.27475   TTTTTCATCACAATA            TCCCTTCAT TGA ATGAATGGA            GATTTACCCGAAAAA  59 254
   CKO_03891 3620546 .. 3620567 - -11.7  -4.28774   TCAGGCAAGCTAAAA           TAACCACAC CGAA GTGTGGTTA            TGATTAAACGTACCG  95 44
   CKO_03890 NONE
   CKO_03889 NONE
   CKO_03888 3616934 .. 3616980 - -16.2  -3.53444   GGATGGCGGCGTAAA CGCCTTATCCGGCCTACAA TGGATGCGGT TTGTAGGCCGGATAA-GCG TAGCGCCATCCGGCT 100 55
   CKO_03885 3615483 .. 3615508 -  -8.9  -2.76696   GTTCGCTGGAAGAAG         CGGCGGCGC TGGATGGC GCGACGCCG          TGGCAGGCTTTCCGC  60 425
   CKO_03880 3610453 .. 3610471 -  -2.4  -2.71712   TGCTTTTCTTTAAAC            GC-GTCC CCTTTC GGACTGC             CTCTTTGTTGGCGGT  39 107
        lamB 3608991 .. 3609018 - -10.6  -2.69319   AACGGTGCAGATAAT        GCCGGATAGCGGC TAC GCCT-TATCCGGC        CTGCATCTCGTTACC  71 74
   CKO_03878 NONE
   CKO_03877 NONE
        ubiC NONE
        ubiA 3606328 .. 3606355 - -13.4  -5.20333   GAGTGACAATAAAAA        GCCGGGTGGCGGC TTC GCC-CTACCCGGC        CTACATTCTGCGCAA 100 80
   CKO_03873 NONE
   CKO_03872 3602553 .. 3602595 -  -8.6  -3.86524   AGATGGCGGCATAAA CGCCTTATCCGGCCTAC GGGGATATTT GTAGGCCTGATAAG-CG CAGCGCCATCAGGCG  74 57
   CKO_03870 3601006 .. 3601016 -  -2.4  -2.72049   CAGAGTTTTTAACCA                 CCGG ACT CAGG                 CAAACCAGGTCCCTT  39 21
   CKO_03869 3600577 .. 3600606 -  -5.7  -4.44448   ACCACGTTAAATAAA       TCGGGCGGC TAATCCGCAGAC GCCGCCCAA        AGCAAGTACGTTGAA  72 84
   CKO_03868 3599840 .. 3599859 -  -3.5  -3.78861   TGATAGAAAATAATA            CCACCGG GTGAAA CCAGTGA             CTTTATGGGCTATTC  54 62
   CKO_03866 NONE
   CKO_03864 NONE
   CKO_03863 3596064 .. 3596079 -  -3.2  -4.16301   TATAGCATAGAGAAA              CACCCG CACG CAGATG               GCACATTGAGGTTAA  56 112
   CKO_03862 3594859 .. 3594882 - -13.1  -4.87803   GATTTGCAAACAAAA          CGCCCCGCG ACTGTG CGCAGGGCG           TGGTGAAATTGACTA 100 56
        pspG 3594352 .. 3594372 - -12.6  -3.10579   CGGGGAAAAGAATTA            GGGCTTCC ACATG GGAAGCCC            TTTCTTTTTTAGTTC  80 161
   CKO_03858 3591780 .. 3591814 -  -7.1  -3.01712   TGGCGTTTTTGAACA    GCGCCGGCGCTGTTCCC GAA GGGATAAGCG--GGCGC    AGTCAACGCATCTGC  57 62
         alr 3590565 .. 3590578 -  -3.7  -3.05963   ATGTTGATGTGAATA               TCGCC GGAT GGCGG                GGTATCCGCCTTATC  45 74
   CKO_03855 3589263 .. 3589274 -  -3.6  -3.01745   CTGGCAATAAGCACA                CCCG GATC CAGG                 ATAAGAAGTGTTACA  45 36
        sucA NONE
   CKO_03853 NONE
   CKO_03852 NONE
   CKO_03851 NONE
   CKO_03850 3581587 .. 3581605 - -13.1  -5.43414   ACCACACATAAAAAA             CGGGGGC TTATT GCCCCCG             TTACTTACTTAATCG 100 30
   CKO_03849 NONE
   CKO_03848 3578496 .. 3578509 -  -5.2  -4.07746   GGCGCAAAAATATAA               CCGG GCGTTG CCGG                ATATCTCCCCTATGC  65 344
        aphA 3574526 .. 3574536 -    -4  -2.51257   GTTCAAAAAAACAGC                 GATT GAG AATC                 TTGCCGGATGATGCC  44 105
   CKO_03844 3573966 .. 3573991 -  -9.7   -2.7782   CAATGCTGTAATAAT         GCCCGAT-GGCG CTG CGCTTATCGGGC         CTACAGAATATGCGT  69 91
   CKO_03842 3570323 .. 3570339 -  -9.4  -5.81412   TTCAGCCAAAAAAAA              GCTCCC GTGAA GGGAGC              TTTTTAAATTCATCA 100 38
   CKO_03841 3569640 .. 3569651 -  -2.2  -3.90112   GGCCCGGTAAGCAAA                GCGCC ACC GG-GC                ATGGCAGATTAACGA  53 34
   CKO_03840 3568827 .. 3568844 -  -8.4  -4.86621   ACCGCGAAGCAAAAA             GCCTCC CGTAGC GGAGGC              TTTTTTTTGCCGATG  88 120
   CKO_03835 3561504 .. 3561562 - -10.4  -4.09685   GCCCACGCTGGAAAA TGTCGCCGTTTACGCTAACTAC-GCGT ACGTTA ACGCCGAAATTCGCGAAAAAGGCGACA CTTACGGCAATCAGG  86 389
   CKO_03829 3555255 .. 3555279 -  -2.1  -2.80816   CGGTGATGCATCAGA         CGCTGGGCGA CTATAT TCGTC-AGCG          CCGACTCCTGCTGGC  39 182
   CKO_03827 3554478 .. 3554502 - -14.4   -4.4572   AAGACCGGAAACAAA          CTAAAGCGCC CTTGC GGCGCTTTAG          TTTTATGCGCGGCGA 100 88
   CKO_03826 3553418 .. 3553438 -  -3.4  -4.53225   AGTAAAAAAAGCAAA           CG-ATTATC CAGC GATAATACG            GGGCTTTTCAACTAA  65 165
   CKO_03825 3551864 .. 3551883 - -12.8  -5.45802   TCCTGAAAATAAAAA            CGGGCGGC AAAA GCCACCCG             TTTTTAGAGGACGCC 100 46
   CKO_03824 3550082 .. 3550095 -  -3.7  -3.17075   GGCCCGGTAAGCGAA               GCGCC ACCG GGCGA                TACGGGTGCTTACTG  47 35
   CKO_03823 NONE
   CKO_03822 NONE
   CKO_03820 NONE
   CKO_03819 3547288 .. 3547299 -  -2.2   -3.3442   GACAACATCAGAACA                TCAC TTTT GCGA                 CCAGCGGCGCCGCCA  45 6
   CKO_03815 NONE
        nrfA NONE
   CKO_03812 3540699 .. 3540717 -  -3.8  -3.29471   TGGCGACGAGAGCAA             CTCATGGA TGC TCCTTAAG             CAAGGGAACGGACGC  47 8
   CKO_03811 NONE
   CKO_03810 3539035 .. 3539045 -  -2.4  -4.43189   AGTAATGCCAGAAAA                 CCGG CTT CAGG                 AAGGAATACGTCCAG  61 59
   CKO_03809 NONE
   CKO_03808 NONE
   CKO_03807 3535990 .. 3536004 -  -7.1   -3.8211   TTTTATGCATAATAA               CGCGA GTTTA TCGCG               ATCATCATGAATAAC  66 168
        gltP 3534000 .. 3534019 -  -4.9    -3.737   CAAGCGGGCAGCAAA            GCCGGAG AAATCA CTCTGGC             GCGCATTCTGGTCAA  55 493
   CKO_03802 NONE
   CKO_03801 NONE
   CKO_03799 3530165 .. 3530192 -    -9  -3.24747   GGCCGAGAGCATTAA        GCTGGCGCACGC CTGC GCGCGGGTCAGC         CTGCTGTGCGCCAAT  65 176
   CKO_03795 3526268 .. 3526278 -  -2.4  -2.77899   TGGGCGGAGTAATGA                 GCGC CTC GCGT                 CTCTACAGCGCCAAC  39 314
   CKO_03790 3521230 .. 3521247 -  -9.1  -2.62983   CCCAGGGCGACATGA             CGCAGAC CTGT GCCTGCG              GCAATCCAGGTTGCC  59 420
   CKO_03782 NONE
   CKO_03781 3513721 .. 3513731 -  -2.4  -3.22113   AGCGTTTCATAAAAC                 CAGC CTC GCAG                 AGATCTTCCCCTCAC  43 79
   CKO_03780 3513239 .. 3513259 -  -7.5  -2.64616   TTCTCACCCACATCA            GCCACTCGT TCG ACGTATGGC            TGATGGATAACTCCC  54 149
   CKO_03778 3512438 .. 3512452 -    -7   -3.9461   TGGGCGGAAGAAGAA               GCCCGC CAG GCCGGC               GCGGAGATGACGGAG  68 232
   CKO_03763 3501169 .. 3501199 -    -4  -2.93723   TTTTTATCAACCACA       CCTGTCTCTCTTAC TGT GTAAAAGTAAGAGG       GATAAAGATTTATAA  46 64
   CKO_03761 NONE
   CKO_03760 NONE
   CKO_03758 3497694 .. 3497706 -  -3.4  -4.18018   GCCCTGTATGCAAAA                CGTT TCGGC AACG                TCCCGGCGCCGGGCA  58 96
   CKO_03756 3496112 .. 3496132 -    -4  -2.91593   CATTGGCGCACAAAG           CGCT-AACG TCAC CGTCGAGCG            TTGGAATCGTGCGGG  46 373
   CKO_03754 3494520 .. 3494543 - -13.8  -3.30124   CTGTAGGCCTGATAA          GCGCAGCGCC ATCA GGCGGTGCGC           TAAAGCTTACTCGTC  90 32
   CKO_03747 3486487 .. 3486518 -  -7.9  -3.39803   TATTTACATGCAGAA      GGAGAACGGGCTG GACCTG CTGCCCGTCCTGC       ACAGCGCCGGATGCA  61 501
   CKO_03738 3477011 .. 3477024 -  -2.3  -4.56597   GCGCGTGGTCAAAAA               CCACG CCGA CCTGG                CGATGATTTGCGATG  65 376
   CKO_03735 NONE
   CKO_03734 3472841 .. 3472887 -  -2.8  -4.05067   CACTGTATAAAAAGA GGGATTGGCGGCAGC-AGGCC TATTGC GCCCTTGCTGCCGCCAGGCTG TATCAGCTCAGTATG  56 28
   CKO_03733 3471316 .. 3471344 - -11.7  -2.55213   GAGTCAGTCAACGCA        GGAGTGCCGTC GTTATCT GGCGGCACTCC        TTGACGCTTTACCGT  76 34
   CKO_03732 NONE
   CKO_03731 3467896 .. 3467910 -  -6.4  -3.71873   TTATTCAGATTTAAA               CATCGC CAG GCGATA               ACCTGTCGCGTTACT  64 101
   CKO_03730 3467079 .. 3467098 - -13.6  -2.52464   GTCCCTTTTAACTCA            GGCGGGTT TTAC AACCCGCC             CGCTTTTACGCCCGA  83 31
   CKO_03729 3466607 .. 3466635 - -10.3  -3.86266   ATACGATGAGAATAA        CGCGAGAAGAACG TCG CGTTCTTCTCGTC        TTCTCAGAGTAATGT  84 29
   CKO_03726 NONE
   CKO_03725 3462876 .. 3462887 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG AAGC CGCC                 ATCCGGCATTACCCG  61 122
   CKO_03721 NONE
   CKO_03720 3458976 .. 3458996 - -12.6  -2.82834   TACCTGACCAGCAGA            GTCGGGAG GGACG CTCCCGAC            ATAAAGCGCTACGCA  79 34
   CKO_03718 NONE
   CKO_03717 3454582 .. 3454628 -  -9.4  -3.14931   TGTATTTTTTATTAA TACGCCCGGCCCCGCTCCGGC GCGACT GCCGAAGCGGGG-CATTCATA GCCAAAAACTAGATA  68 34
   CKO_03716 3452128 .. 3452141 -  -3.9  -3.87373   GATAGTCTGGAGAAA               TTCAA TCAG TTGAA                AGCGCTGGGAGTTGA  56 266
   CKO_03709 3444273 .. 3444283 -  -4.6  -3.62572   CACCACCACGGTAAA                 CGGC GGC ACCG                 TGCATTTTAAAGGGG  55 408
   CKO_03704 3441550 .. 3441566 -  -2.1  -2.91735   TGAAGAGTGTATACA              GGCTTCG CAC CGCAGCA              AACCGTTCTGACTTA  40 38
   CKO_03698 3436096 .. 3436115 - -13.6  -2.77148   GGTAGTAACACAGGA            GGCACGTC AGAT GACGTGCC             TTTTTTCTTGTCATA  84 106
        fxsA 3433388 .. 3433405 -  -5.5  -3.41229   ACAGGCGCAGGACAA             GCCAGAC CATT ACCTGGC              GCGCCTTTCTGCCCG  53 441
   CKO_03693 NONE
       groEL 3430052 .. 3430075 - -12.4  -5.50723   TGACCAAAAGAAAAA          CCCCCGAACA TTTC TGCCCGGGGG           TTTCTAAATTCTGGG 100 177
   CKO_03691 3429428 .. 3429439 -  -7.2  -4.84529   TGAGAAAGCGAAAAA                CGCC TGAT GGCG                 CTGCGCTTATCCGGC  91 200
   CKO_03687 NONE
   CKO_03685 3426142 .. 3426164 - -15.6  -3.51202   GAGCAAATCAATTAA           CGGTACGACG CCA CGCCGTACCG           TTCACATTTATTGCT 100 288
   CKO_03683 3424695 .. 3424709 -  -2.7   -3.8802   AAAACAGAAGGGAAA               GCCTG GTTTA CGGGC               GACCCCAGCCGCGCC  54 285
   CKO_03677 3419654 .. 3419694 - -15.6  -5.15969   GGGGAATTGAAAAAA  TGTGCTACAAAATGGCGC TAATT GCGCCATTTTGTTTCACA  AAAGAGGGGTTTTCG 100 44
   CKO_03676 3417919 .. 3417946 -  -8.5  -2.78867   GTAAGCCGTAATAAT       GCCGGAT--GGCG GCTT CGCCTTATCCGGC        CTACAGAACAGCAAT  62 71
   CKO_03672 3411766 .. 3411778 -  -3.3  -3.33261   TCGTAAGCCGGATAA                GACGC TTC GCTTC                GCCATCCGGCAAACA  49 47
   CKO_03669 NONE
   CKO_03667 NONE
   CKO_03666 NONE
        mutL NONE
        miaA NONE
         hfq 3403313 .. 3403342 - -10.7  -2.72799   CCTCGATATATATCA       GCGGGGAACGCAGG TTC CCTG-GCTCCCCGT       GTGTAAAACAGCCAA  71 45
   CKO_03662 NONE
   CKO_03661 NONE
   CKO_03660 3399590 .. 3399626 - -10.1  -4.96848   GTCCTTATATAAAAA    GAAAACCACCGCCTCCC TGA GGATGCCGGTGGTTTTG    TTCATCTAAAACCGT 100 51
   CKO_03659 NONE
   CKO_03657 3397935 .. 3397958 - -12.4  -3.31248   GAACAGGTCTGATAA          GCGCAGCACC ATCA GGCACTGCGC           CATGACCCCAAATTA  85 38
   CKO_03656 3397810 .. 3397826 -  -3.6   -3.0439   ATTGATGATAAACCA              GCCACC AGCCA GGTCGC              TAATTTATTTCAGTT  45 30
   CKO_03654 NONE
   CKO_03653 3394816 .. 3394843 - -11.2   -4.0162   GGTCTACAGTACAAA        CGCCCTCTCCAC GCAG GGGGAGAGGGGG         AAATTACTCAGCTGA  89 29
   CKO_03652 3393986 .. 3394003 - -11.3  -5.25803   AACGGTCACAAAAAA             GCCATCC CGAG GGATGGC              TTCATCAGTCAAAAG 100 44
   CKO_03651 NONE
   CKO_03650 3391860 .. 3391870 -    -4   -3.9941   CTGTGCACAATGAAA                 TCAT GGG ATGA                 CCGCAATGGAATGCC  58 250
   CKO_03647 3390262 .. 3390276 -  -2.7  -3.69483   AGGGCAGCGAAAACA               GCCTG TATGC CGGGC               ACTGGATGTTTACCA  51 282
   CKO_03644 3388226 .. 3388253 -  -2.8  -3.81111   AAAGAAAACGGTAAA        GAT-GTTGTAGAG GAT CTCCATAACGATC        TCCAGTAGACGAAGT  52 166
        ulaA 3386853 .. 3386866 -  -6.7  -3.15579   GGAACTCCTTATTAA               GCAGA GTGT TCTGC                CAGTTGTTTTTCTGC  57 8
   CKO_03642 NONE
   CKO_03641 3386056 .. 3386067 -  -5.8   -3.6502   TATTCCTTACTTAAA                CTGC CGCC GCAG                 TGGCGTTATCAATTA  58 9
        ulaD NONE
   CKO_03638 NONE
        sgaE 3383612 .. 3383624 -  -9.1  -3.13022   GAATGAAGAGACAGA                TGCGC GAG GCGCA                ACGTACTACCACGCC  63 238
        rpsF NONE
   CKO_03631 NONE
        rpsR 3382132 .. 3382142 -  -2.4  -2.50307   CAAAGTCGTATTAAT                 GGAC CGT GGCC                 GATTACTGATGACGA  39 28
        rplI 3381610 .. 3381628 -  -9.5  -4.73108   GGCAGAAAAGCAAAA             CGCCAGC ACAAG GCCGGCG             TTTTTACGCGATAGA  93 51
   CKO_03627 3380567 .. 3380592 - -14.7  -3.30124   TTGCAGGTCTGATAA         GCGGTAGCGCC ATCA GGCGTTACCGC          TTCACCTTGTTTACC  93 19
   CKO_03625 3378762 .. 3378788 -  -8.1  -2.85351   GTGCGTCATATGATA        CGACGA-TCCTG TTAT CAGGACTCATCG         ATATTAGGTAAGAAT  62 244
   CKO_03624 3376945 .. 3376959 -  -4.2  -4.03811   CACATGATGAAAGAA               GAGCAG ATC CTGTTC               CCGATGATCAAACAA  60 354
   CKO_03622 3374279 .. 3374290 -  -4.4  -3.92143   GAAAACCCGGATAAA                CATC CGAT GATG                 TGGGCAACAGCACAG  60 482
   CKO_03620 3372383 .. 3372394 -  -2.2  -4.27316   CCGGCGAAGGCAAAA                TCGC CTCT GCAA                 CCCGTGCCGATTACG  60 433
   CKO_03617 3371160 .. 3371176 -  -9.4  -3.78934   GGCGGCGGACAACAA              CTGGCG TCTGG CGCCAG              TTCACAGCGACACGA  73 266
   CKO_03615 3367973 .. 3367997 -  -7.8  -3.62591   CGCATAACTTTGAAA          CCCATCAGCG CGTAT CGCCGATTGG          GATCGCCGATCGCGG  65 482
   CKO_03613 3367311 .. 3367329 -   -16  -3.45571   CCCTGGAAACATCAA             CGGCTCCC ATT GGGAGCCG             TTTTTTATACTACTT 100 64
   CKO_03610 3363217 .. 3363227 -  -4.6  -2.62316   TAAACTCATAATTCA                 GGCC CCA GACC                 GATGTAAAACTGTAA  45 5
   CKO_03609 NONE
   CKO_03608 3359057 .. 3359074 - -12.7  -4.39748   CACCACATAAAACAA             CGCCACC CGAA GGTGGCG              TGTTTTTTATCAGCA 100 35
   CKO_03606 NONE
   CKO_03605 3357393 .. 3357412 -  -9.3  -4.11484   CGTAATTTTTTAAAA            GCCCTCA TATTTG TGAGGGC             TTTTTTATGCCGGGT  79 100
   CKO_03603 3355505 .. 3355536 -    -5  -4.21974   CCATCAGGCAATAAA      TGCCGGATGGCGGCG TAA CGCCTT-ATCCGGCC      TACAGAAGACCAACA  67 47
   CKO_03602 3353879 .. 3353891 -  -4.7  -4.18018   GTCGGCCAGCGAAAA                CGTCG CTT CGGCG                GTGTGGTTTGCGGGA  64 67
   CKO_03601 NONE
   CKO_03600 NONE
   CKO_03599 3350250 .. 3350266 -  -2.2    -3.889   GGCAACTACATCAAA              TTCCCG AATGG CGTGAA              GAAGTACATTAAGTT  52 474
   CKO_03597 3348027 .. 3348064 -  -5.5  -2.87344   TATCCGGCCTACAGA   TTGTAGGCCCGGTAAGCG CAG CGC-CACCGGGCATATGA   TTACTCCGCAGCCTC  50 26
   CKO_03596 3347678 .. 3347692 -    -7   -3.7956   GAAAGAAGGCAATAA               GCCGCC GAA GTCGGC               GCGGCAGATCTTCCA  65 241
   CKO_03594 NONE
   CKO_03593 3345195 .. 3345221 -  -5.9  -4.92783   AACCGATGAGAAAAA        GCACATTC-GCG CGAT CGCCGAATGTGA         AAAAGTGTGACGGGA  80 115
   CKO_03592 NONE
   CKO_03591 NONE
   CKO_03590 NONE
   CKO_03589 3343984 .. 3343997 -  -3.1  -4.20367   CCTTTTAATAAAGAA               TCAGCG TTG CGC-GA               CGAAGTCCACCTTGT  60 12
   CKO_03588 NONE
   CKO_03587 NONE
   CKO_03586 3341280 .. 3341301 -    -5  -3.34398   CGCGGGGTGGAAACA           CCGAGCGC GGTCAT GCGCCCTG            ATGTATTAATCACTT  54 58
   CKO_03585 NONE
   CKO_03584 NONE
   CKO_03583 3337503 .. 3337532 - -12.4  -3.96148   CTGCTTCAGGATAAA       CAAATGTAATGC GTTATA GCATTACATTTG        CATTAACATTCATTT  95 55
   CKO_03576 3327906 .. 3327926 -  -2.5   -2.5474   TCGTATTTATAACAC            TGGAATGCG AAT CACACTCTA            TTCAACAGGTATGGT  39 16
   CKO_03574 3327064 .. 3327093 -  -2.8  -4.05446   GCGTTCAACTACAAA       CTGGACG-ATGGC TGGAC GCCGTACGTCGAG       CTGGTCTCTCTTGAT  56 120
   CKO_03570 3321655 .. 3321677 -  -8.4  -3.48465   AATTTAAAGCGATAA           CAGGGACGTC GGG AACGTCACTG           CCTTACGTATCCGGT  69 60
   CKO_03567 3318826 .. 3318855 -  -9.3  -4.57755   ACGGAGTATAGAAAA       GCGTAATGGCTGC CGCA GCAGCCATTATTC        TGGATTATTGCCAGC  89 30
   CKO_03566 3317881 .. 3317893 -  -4.8  -3.14132   GGGGTCGCGCATTAA                TGGG TTGAG CCCA                GCATGACGACAGGAC  52 9
   CKO_03565 3316185 .. 3316199 -  -7.8  -4.65895   CGGTTGATCCAAAAA               CCGGCA GCG TACCGG               ATGACGTGTCCGCTC  83 386
   CKO_03559 3313202 .. 3313221 -  -4.3  -3.35679   GGTGGTGATGGATAA            TGGCATG ATTACG CATACCA             TTTTGCACAGCGCGG  51 419
   CKO_03553 3307633 .. 3307690 - -10.7  -3.90922   ACGCTGGCGAAATAA CGATTACGTCTTATCCGGCCTACAGA TCGTGCT CCCGTAGGCCGGGTAAGACGTTTT-G CGTCGCCACCCGGCA  84 48
   CKO_03550 3305908 .. 3305922 -  -5.6  -2.79796   TGGGATTTGAGCATA               TCAGCG AAC CGCTGG               GCTGCACCGGGCATG  47 141
   CKO_03548 NONE
   CKO_03547 NONE
   CKO_03546 NONE
   CKO_03545 NONE
   CKO_03544 3302222 .. 3302242 - -11.1  -3.66874   GTAACTTGATGGAAA            CGCCGGAGA CCC TCTTCGGCG            TTTTCTTTTATAAGG  86 33
   CKO_03538 NONE
   CKO_03536 3294536 .. 3294550 -  -6.4  -4.08307   GCAAAAGGCAAAGAA               GTCACC GTT GATGAC               GGAATTCTTGGCGGG  67 298
   CKO_03532 3290286 .. 3290315 -  -6.6  -5.95539   TTGCAAATAAAAAAA       TGGCGT-CTCAAT TGGTT ATTGAATACGCCA       TTTTACTTATAAAAA 100 45
   CKO_03531 3289100 .. 3289118 -  -8.9  -5.13016   AAGCAAAACTAAAAA             GAGGCTA TAGAT TAGCCTC             TTTACTGTCAGATTT 100 261
   CKO_03529 3287821 .. 3287852 -  -4.4  -4.44046   TTGACGTCAAATAAA      CAGGTACGGCTAGT TAAT AGTATCCATACCCG       ATATTAAGAAAACTA  67 230
   CKO_03528 NONE
   CKO_03527 NONE
   CKO_03526 NONE
   CKO_03525 3283087 .. 3283103 -  -2.3  -3.01288   CAAGAAAATAAATAG              CATAATA TTT TACCATG              TCAATAGCTAAAACC  42 52
   CKO_03524 3282504 .. 3282519 -  -4.7  -4.45399   ATAGTAACAGTAAAA              GCATC TAAGAG GATGC               TTTTAAGCAATAATT  70 125
   CKO_03523 3280853 .. 3280872 -  -5.1  -4.68607   TACAAAAAACATAAA            TCACTTT TTAAAG AAAGTGA             TTATCTTTTTCAGCC  72 6
   CKO_03522 3280597 .. 3280617 -  -3.3  -2.61728   ATGGTGAAGAGCAAT            GGTCATACA CTA TGTATAACA            GCCAGTCCAAAGCAA  43 85
   CKO_03521 NONE
   CKO_03519 3279376 .. 3279389 -  -6.7  -2.56539   CTCAATCCAGAAGAG               CATCG CTTT CGATG                TAAGGCTGGCAAACC  52 270
   CKO_03513 NONE
   CKO_03512 NONE
   CKO_03511 NONE
   CKO_03510 3271770 .. 3271784 -  -4.2  -3.72576   CCGTTGTCCAGCAAA               GCGAAT TGG ACCCGC               ATGATTAAGCGCTTA  56 60
   CKO_03509 3269625 .. 3269637 -  -3.3  -2.57132   CTTGTCTTGCATAAC                GAGAC AAA GCCCC                TTTCAATGCGACGGA  42 193
   CKO_03508 NONE
   CKO_03507 3267662 .. 3267695 - -12.7  -3.29829   TACACTTTTGGATAA     TATCACTTGGATCTT TATA AAGATCCAAATGACA      GTGCATATCAAGCTT  85 40
   CKO_03506 NONE
   CKO_03505 3265855 .. 3265882 -  -4.2  -4.39386   GCGAAAGCAGCAAAA        GCCATGATGAACA CAT TGTTC-CCATCGC        CTCCCGGCTGCGGCC  67 352
   CKO_03498 NONE
   CKO_03497 NONE
   CKO_03496 NONE
   CKO_03495 3256759 .. 3256784 - -16.3  -3.71873   TCATTCATAGCTAAA         GTAACCGCAGA ATAA TCTGCGGTTAC          TTTGTTAAAGAGATG 100 30
   CKO_03488 3249627 .. 3249639 -  -3.3  -2.78438   CACTACACCGGAAAT                CGCTG CCT CAGCC                CTGTCGCCGACGTGC  44 83
   CKO_03486 3249417 .. 3249428 -    -3  -3.13403   TGCGGGTGATTAACA                GAAA TCAC TTTC                 CCCCATTAGATTGTA  45 8
   CKO_03485 NONE
   CKO_03484 3247809 .. 3247833 -  -2.8  -5.59564   ATAAAGGTAAAAAAA          TGAGTCTTGT CGACT ACAGGACGCA          TGAATACGCTTTGGC  89 263
   CKO_03474 NONE
   CKO_03473 NONE
   CKO_03472 3236483 .. 3236517 -   -11   -2.5409   ACAACCGGTAATTTA    GCCATCTTATC-CTA AAGAAA TAGCGATAAGATGGC     TTATATAATCGCCGC  73 42
   CKO_03471 NONE
   CKO_03470 3234531 .. 3234546 -  -5.4  -4.59773   TGCTAGCGGTAAAAA              CGACCT GTAA AGATCG               CTGGCGGCAGATATT  73 296
   CKO_03467 3230162 .. 3230181 - -12.2  -5.84011   AATAAAAAACAAAAA            GCCCCATT TAAA AATGGGGC             TATCAATACCATTAA 100 37
   CKO_03466 3228812 .. 3228826 -  -5.7  -3.55191   GTAATGTCAGAAACA               TAGCG CCTCC CGCTA               ACGGAACGTCGGCAG  58 23
   CKO_03465 3228665 .. 3228697 - -10.5  -2.71712   CTTCCGGGTGTAAAT      CCAGGCAGGCCTGTC AGC GACAGGCCTGATTGC      TTTTGTGAGTTTTAT  71 6
   CKO_03462 3226681 .. 3226695 -  -2.7  -4.59773   GCTGATGGCGAAAAA               CGCGG GCTCG CCGCT               ACTCACCGCCCATCT  67 440
   CKO_03455 NONE
   CKO_03454 3218628 .. 3218646 - -13.8  -2.62184   TCTGCGCCGACAGCA             GGCCCCGC TAT ACGGGGCC             TGCTTTTTTAAGCGA  83 33
   CKO_03452 3215774 .. 3215787 -  -5.9   -3.5032   GCTGCATATGAAATA               CGCCG TCAT CGGCA                CCAACGTTCCCGCCA  57 467
   CKO_03449 3214376 .. 3214399 - -12.4  -5.15969   CGTGAATGTAAAAAA          GGCCGGACTG AATA CAGCCCAGCC           TCTGTGGTGTTACGG 100 45
   CKO_03448 NONE
   CKO_03447 NONE
   CKO_03446 3211637 .. 3211648 -  -7.2  -3.30243   ACGTAGGCCGGATAA                GGCG CAGC CGCC                 ATCCGGCACTCACTC  61 54
   CKO_03442 3206030 .. 3206041 -  -5.8  -2.78816   CCATCCGGCATCACA                GCAG CTCC CTGC                 CCGTAGACCGGATAA  50 67
   CKO_03434 NONE
   CKO_03433 3197258 .. 3197270 -  -9.1  -3.53012   CTGGTTGTCGCCAAA                GGCGA TGC TCGCC                TGGACAATAAGAAAC  68 353
   CKO_03431 3196744 .. 3196759 -    -9  -2.55017   CAAAACAACATAGAC              GTGCTG GCAG CAGCAC               CGCCGTGTAAGGGTC  64 46
   CKO_03430 3195335 .. 3195362 -   -15  -3.57462   GACTGTACGCTGAAA        TAAACAAGGCGC CGCT GCGCCTTGTTCA         ACACGTCAGGCCATC 100 31
   CKO_03427 NONE
   CKO_03423 3192126 .. 3192140 -  -2.7  -3.53811   TGGATGCCGCGCAAA               CGCTG ATTCA CGGCG               CGGTTCGCCACCTCA  49 195
   CKO_03421 NONE
        rimI NONE
   CKO_03418 3189666 .. 3189676 -  -6.8   -2.8805   ATCAGTGTTTACACA                 GGAG TTG CTCC                 AGTTCGCTTAATGAC  56 1
        prfC 3187935 .. 3187960 - -14.7  -3.54676   AGGCAGGGAAAGTAA         CAGGGCGCGCC GGAT GACACGCCCTG          GAGGGACAATTAGTG  95 35
   CKO_03416 3187026 .. 3187037 -  -4.4  -2.85838   AATTAAGACGAATTA                CTGA GTTT TCAG                 GTCATTTTTGACGCT  46 11
   CKO_03415 3186681 .. 3186699 - -14.6  -4.28049   GCTAAAACCGTAAAA             GCCAGTCC GAT GGACTGGC             TTAGCATGAATCATG 100 59
   CKO_03414 NONE
   CKO_03413 3184539 .. 3184565 -   -10  -4.86621   ATGGCGAAGCAAAAA         CGTGGCCGGGCG CAA CGCCTGACGACG         TGCAACAGCTGGCAA 100 223
   CKO_03410 3180997 .. 3181033 -  -7.3  -3.33815   AGGCCGGGTAAGCAA   CGCGCCCCCCGGCAGTC GTATT GA-TGCCGGATGGCG-G   CTGCGCCTTATCCGG  61 73
        deoA 3179586 .. 3179600 -    -5  -2.87132   CTTGTTCTCCATACA               TCTTGC GCT GCAAAA               AAGCGATCAGATCAG  49 48
   CKO_03408 NONE
        deoD 3177370 .. 3177384 - -11.4  -4.20932   AACAGGCAGGGAAAA               GGGGCA AAC TGCCCC               TTCAGAGTGCTGACA  91 169
        serB NONE
   CKO_03398 NONE
   CKO_03397 NONE
   CKO_03396 3166616 .. 3166628 -  -4.7  -4.39277   GAAGAGTATAAGAAA                CGCAC GCT GGGCG                CCGACGCGCTGGAGC  68 164
   CKO_03394 3162850 .. 3162862 -  -4.1  -3.78879   GATAGCATAACATAA                CCGAT GCG ATCAG                TAACGGCGCTGCCAT  56 22
   CKO_03393 3162008 .. 3162031 -  -6.6  -2.75022   GTGGTGATAGAGAAT          GC-CGCCCAGC GAG GCGAGGCGCGC          TCAGCAACGCTGCCG  52 433
   CKO_03391 3160748 .. 3160766 -  -8.8  -3.21378   GAAAGATGACGAACA             GGAGGTGT TCT ACACCACC             GCGCTACCGCAAGAA  65 292
   CKO_03389 3159400 .. 3159416 - -11.5  -4.72986   CACCGGCAGCAAAAA              CGGCGCA AAA CGCGCCG              TTTTTTATTGTCTGT 100 94
   CKO_03386 3157014 .. 3157036 -   -12  -5.75342   TTGGTCGAAAAAAAA           GCCCGCAC TGTTCAG GTGCGGGC           TTTTTTCTGTGTTTC 100 328
        thrA NONE
   CKO_03384 NONE
   CKO_03383 3152223 .. 3152251 -  -7.5  -5.24129   TTTCTCCATAAAAAA       GCCGGAT--GGCG GCTAA CGCCTTATCCGGC       CTACAATAGCTACAA  91 70
   CKO_03382 NONE
   CKO_03381 3151558 .. 3151574 -  -9.4  -4.22652   TTACATCATTGAAAA              CCGGCT GACGA AGCCGG              AACAGCTCACCGCAT  84 98
   CKO_03378 3148089 .. 3148131 -  -8.4  -2.81888   CTGCAAAGGGAAGGA CAGACAGGTTTCAGAAGAGG TAG CGTGACCAGAAACCTGTCTG GTCACGCCGAATGAT  62 40
        mogA NONE
   CKO_03376 3145688 .. 3145700 -  -6.2  -3.48395   ATGGGTCTGACAGAA                GCGC CGAAC GCGC                AGTTCCTGGGCGCCT  57 338
        dnaK 3143030 .. 3143072 - -16.2  -3.01924   TATCTGCCCCTAACA TGCGTGCACGGGCGGAGAGG AAC CCTCTTCGCCCGTGCCAGTA TTTTACCCGTTCAAA 100 47
   CKO_03371 3141824 .. 3141847 - -16.8  -5.72622   CCGACAAACAAAAAA          GCCCGGGATT GTGC AATCCCGGGC           TTTTTATGCAATGTA 100 51
        nhaA 3140453 .. 3140465 -  -3.4  -3.08679   TGGTTGTAGTTAATA                TGAG ACATG CTCA                CTCCTCTCCCTGATC  45 83
        nhaR 3139497 .. 3139512 -    -6   -5.0133   CAGCTTTGTAAAAAA              GCCCGC GCAA GCGGGT               TTTTTTATGTCTGCC  80 77
   CKO_03367 NONE
        ileS NONE
        lspA 3134566 .. 3134577 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG CTTA CGCC                 GCCATCCGGCATTTT  61 42
   CKO_03364 NONE
        ispH 3132975 .. 3133002 - -11.2  -4.42788   CGTAATGGCATAAAA        GATGCCGGTCGG ATAG CAGACCGGCGTC         AAAGCGTAATTACTC  95 35
   CKO_03359 NONE
   CKO_03358 3127963 .. 3127999 - -13.8  -3.58343   CCGATTATTGGCAAA    CCTTTTGCCGGTTGGC AAGCG ACCGACCGACAAAAGG    AGACGAAACAAAATT  93 82
   CKO_03357 3126733 .. 3126746 -  -3.1  -3.70553   CAAGGTAAGACAGAA               GTCGT TCAA ACAAC                GGGGCGCTATGCGGC  51 272
   CKO_03355 3125330 .. 3125341 -  -7.2  -4.10657   CTATATGCGGGAAAA                GCGG GACA CCGC                 AGGCAACTCTGCCTG  71 61
   CKO_03354 3124293 .. 3124315 - -13.6  -4.44355   TAATGCTAAAAATAA           TAGGGCAATA AAT TATTGCCCTA           TGTAATCAACAAATT 100 79
   CKO_03351 NONE
        carB 3119471 .. 3119488 -  -9.9  -5.41143   TATGGCGTAAAAAAA             GGTTCCT TTGC AGGAACC              TTTTTATATCACCAG 100 58
   CKO_03349 3118722 .. 3118747 -  -9.7  -4.18506   CCAGGTCGAAAAGAA         CCGGCCGCGCCT GAA AGGCACGAC-GG         AGGTGAAGCCAAAAT  83 148
   CKO_03341 3110394 .. 3110411 -  -6.3  -2.67747   CCGGCAGACGAGAAG             GGGTATC GCTG AATACCC              AGACATGAGAAAACG  53 63
        fixB NONE
   CKO_03339 NONE
   CKO_03338 3107829 .. 3107848 -    -5  -3.30124   TTGTAGGCCGGATAA            GAC-GCGTC AGC GACGCCATC            CGGCATCAACCTCAG  54 37
   CKO_03337 3106389 .. 3106400 -  -4.4  -4.16397   CCTTAAAAGAAAATA                CAGA ACAC TCTG                 AAGATATCCCCTAGC  61 36
   CKO_03336 3106070 .. 3106086 -    -3  -4.51196   GCTAAATGGATAAAA              CTGAAT TAATT ATCCAG              TTCGCTCATGTTCTT  62 14
   CKO_03335 NONE
   CKO_03334 3103494 .. 3103536 -  -6.9  -2.93723   CTCGCAGCAATCAGA CGCGCCATCCG-GCCTACGA TGGT TTGTAGGCCCGGTAAGCGCA GCGCCACCGGGCAAA  56 74
        folA 3102774 .. 3102804 -  -8.9  -3.30124   TTGTAGGCCGGATAA       GGCGTTTACGCCG CTATC CGGCATTCACGCC       ACATTATTGCCTGAT  70 88
   CKO_03332 3101460 .. 3101473 -  -2.3  -3.01712   CTCTGTCGCGCAATA               TTGCC AGAT GGCGA                ACTATCTGTCAGAAA  42 126
        djlA 3094791 .. 3094803 -  -5.5  -3.30243   ACGTAGGCCGGATAA                GACGC TTT ACGTC                GCCATCCGGCAAAAC  56 43
   CKO_03318 3083265 .. 3083277 -  -4.8  -3.20382   CGTCAGATTTACGAA                GCAG CGATT CTGC                TAACCCTCACTCGCT  52 109
   CKO_03317 3081985 .. 3082001 -  -8.7   -3.5394   AAACCCTGGGCTAAA              GCTGAAC GCG GCTCAGC              GGGAGAAGCTGCATC  68 498
   CKO_03313 NONE
   CKO_03311 3076991 .. 3077013 - -10.6  -5.37593   GCCGAAACGAAAAAA           GCCAGCAG GAATTAT CTGCTGGC           GCGGCGATAAACACC 100 84
   CKO_03309 NONE
   CKO_03308 3075234 .. 3075250 -  -4.3  -4.25104   TTTTCTGGATGAAAA              GGGTCAG CAG CCGAACC              CGGAGTTCGTGCTGA  66 327
   CKO_03303 NONE
        leuO 3069175 .. 3069212 - -10.1  -4.86133   CACACAGACGAAAAA   GCAGAATAAACCAGA TATTTCAC TCTGATTTATTCCGC    CCGTATTCACTTTTG 100 32
   CKO_03301 NONE
        ilvH NONE
   CKO_03299 NONE
   CKO_03298 NONE
   CKO_03297 3065334 .. 3065365 -  -2.9  -3.05844   GTTGGCAGGTGAATA     TTTGCCCGGTCAGCG ACAA CGC-G-CCGGGCGAT      TTGCCAGATGGCGGC  43 72
   CKO_03296 3064842 .. 3064852 -  -5.4  -4.26903   CGGAGCGGAGGAAAA                 GCTT GTC AAGC                 AAGTCAGGACGCTTA  69 225
   CKO_03295 NONE
        mraW NONE
   CKO_03292 NONE
   CKO_03291 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
   CKO_03286 NONE
        murG 3053666 .. 3053686 -  -8.2  -2.52896   TCACTTCTCAATTCA            TGCGGTGC AAAAG GCACCGCC            ACAATTACGCCCGGG  61 30
        murC NONE
         ddl NONE
   CKO_03282 NONE
        ftsA NONE
   CKO_03280 3047875 .. 3047896 -  -6.7  -3.09208   AAATTACCTATCCAA           CCGAAGTGTA CTA TACA-TTCGG           TGGGCCAGTTTAGCA  55 75
        lpxC 3046737 .. 3046780 - -11.1  -5.80248   GAAGAGATAAAAAAA CGACTGGCTTACCTGGC CGGAGAGGGT GCCAGATTAACCAGTCG AATTTATGCGACAGG 100 173
   CKO_03278 3045973 .. 3045991 -  -2.2  -3.80207   TAATAAAATCTCAAA             CGCCCCGC GAT GCGGAGTC             TCTATAATTAGTTGA  50 54
   CKO_03277 3043215 .. 3043232 - -12.7  -5.29782   TACATCCATAAAAAA             GGCGCAG TCAC CTGCGCC              TCATTGTCTTTATTC 100 46
   CKO_03276 3042723 .. 3042753 -  -7.4  -2.55282   AATTCAACTAAAACG       TAGGGCGGGCAAGC GCA GCGCCCCCGCCATA       ATTTGCCGGATGGCG  58 77
   CKO_03271 3039841 .. 3039864 - -13.9  -2.59564   GCGGTATGGGATAAT          GCTGGCGCA TTGTGC TGCGCCAGC           GCAGGGGATTACAGG  83 34
   CKO_03266 NONE
   CKO_03265 3034033 .. 3034057 - -12.2  -4.25104   TCGCTGGGACGAAAA          CGGAATGCCA GATTT TGGCATCCCG          CCTGCGGATACCGTC  95 142
        pdhR NONE
        aceE NONE
        aceF 3024122 .. 3024139 - -10.5  -5.32882   GATTACCAGAAAAAA             GCCGGCC GTCA GGCCGAC              TTTTTTGCTTGCTTA 100 38
   CKO_03256 3022486 .. 3022501 -  -8.2  -5.46657   TACCCCAATAAAAAA              GCGGCC GCTA AGCCGC               TTTTTCTTTATCCAC 100 49
   CKO_03252 3016979 .. 3017006 - -12.8   -5.4659   GAATAGAAATAAAAA        TGCCCGGTGA CGCAAGGT TCACCGGGCA         TTGATGCGTTTTTAC 100 60
   CKO_03251 NONE
   CKO_03249 3016042 .. 3016070 -  -9.5  -2.64803   CTACCCGGAAAGCCA        CCCGGAAGGCGGA TTG TGCACCTTCCGCG        CCGACATTGAAGTTT  63 457
   CKO_03244 3012169 .. 3012180 -  -4.4  -5.00616   GTTGTCTGGAAAAAA                CGTA TTGG TACG                 CCGCAGGACAGCATG  80 438
   CKO_03242 3009218 .. 3009230 -  -9.1  -3.61764   CGACCAACCGTGAAA                CGCTG GAA CAGCG                CTATCGTCGGGGGGT  70 164
   CKO_03240 NONE
   CKO_03239 3006659 .. 3006690 -  -9.4  -2.84126   TGATAAACGTCAAAG      TCTGCCCCTCCCCC CGGC GGAGGAGAGGAAAA       ACATTACGTGCGCAA  65 29
   CKO_03238 3006095 .. 3006132 -  -4.8  -3.73647   CTCAGCTACGAATAA   CGTTCCCTGCGGCTGAC TGCCT GTCAGCCGCATC-ATCG   CCTCCACGAATTGAC  59 43
   CKO_03221 2988691 .. 2988706 -  -3.9  -3.06696   TTTCTCCGCAACATA              CAGGC GCAAAG GCCCG               ATTCTCTGTTCTTCC  45 161
        mrcB 2986112 .. 2986125 -  -9.5  -2.96274   GGCCTGATAAGCACA               GCGCC ATCA GGCGC                AACGGTTAGTTACTA  70 31
   CKO_03218 2983563 .. 2983584 - -13.7  -2.76261   GGCCAACTTGTAAAG           CGGGCACGG CGAA CCGTGCCCA            AAGAGAAATTAGAAA  84 34
   CKO_03217 2982697 .. 2982707 -  -2.4  -3.01365   GAGCAGAGGAGAAAG                 CGCC ATC GCCG                 TTAACAATCGACGTC  42 65
   CKO_03216 NONE
   CKO_03215 2979768 .. 2979778 -  -3.2  -3.78778   GGACGATATCAACAA                 CACC ATC GATG                 CCGCGCGTCGGGTAT  54 125
   CKO_03213 NONE
   CKO_03212 NONE
   CKO_03211 2976481 .. 2976493 -  -9.1  -3.30124   CCGTAGGCCGGATAA                GACGC CCT GCGTC                GCCATCCGGCAATAC  70 42
         dgt 2972663 .. 2972679 -  -4.3  -3.10164   GTATTTATTATTCAA              CCGCCAT CAG ACGCCGG              TATTCATCCCAGGCG  47 1
   CKO_03206 2971063 .. 2971090 -   -15  -3.94381   ACAGAATGTGAGAAA        TGCCCTTTTCCC GGAC AGGAAAAGGGCA         AGAGAGGAAATTACT 100 36
   CKO_03205 2969474 .. 2969489 -  -4.6  -4.13767   CCCGCCAGCGTAAAA              CCGTCG TCGC CGATGG               TATCGGGCAAGGTTA  62 321
        rpsB 2963649 .. 2963665 - -10.8  -4.87318   TTTAAAAGTGAAAAA              GGGGCC TAAAG GGCCCC              TAACCAAACGTGATA 100 80
         tsf 2962702 .. 2962723 - -13.7  -4.67755   AGATGGACGCAAAAA           GAAGCCGCC CTCA GGCGGCTCC            TTTTCGACAATTAAG 100 36
        pyrH 2961607 .. 2961624 -  -3.4  -4.11751   ACGAATCCTTGAAAA             CTAGTC TCAGTC GACCAG              ACAATCACACAATAC  59 262
   CKO_03195 2960975 .. 2961011 - -12.2  -4.65153   GGATAGAAAGCAAAA   CGCCGCCCGGAAGACCC GTCA GGGTCAACC-AGCGGCG    TTTTAGTCGTACAGG 100 45
   CKO_03194 NONE
   CKO_03193 NONE
   CKO_03192 NONE
        cdsA NONE
   CKO_03190 2956486 .. 2956503 -  -2.7  -3.33696   GTTCTTCCTAACTAA             CTCTC TTACAACC GAGAG              AAATCATTGAAAAGT  47 13
   CKO_03189 NONE
   CKO_03188 NONE
        lpxD NONE
        fabZ 2951766 .. 2951781 -  -7.5  -2.80779   CCAATATGAACATTA              GCGCC AATACA GGCGC               CGTCTTCCACAATGG  59 78
   CKO_03185 NONE
        lpxB NONE
        rnhB 2949304 .. 2949315 -  -5.8  -3.01243   TCGACACAAGAATCA                GGAC GCGA GTCC                 CAGGGCGCGTTTGAC  52 11
        dnaE NONE
   CKO_03181 2944741 .. 2944759 -   -11  -6.02914   CGCAGATAAAAAAAA             GGGCCACA AAA TGTGACCC             TTTTTACTCCATGTC 100 76
   CKO_03180 NONE
   CKO_03179 NONE
        tilS 2940332 .. 2940347 -    -6  -4.18018   GTCGGTCAGGGAAAA              GGCGGC ATAT GCTGCC               GCGAACTTACTGGTG  67 392
   CKO_03175 2939445 .. 2939462 -  -4.1  -3.31188   GATGACAATCATGAA             GGCTG TTGCCATG CAGCC              AGATGAATTTCCAGA  51 1
   CKO_03174 NONE
   CKO_03173 2938235 .. 2938250 - -11.8  -5.95539   GGCTAAACAAAAAAA              CCCCGC TGAT GCGGGG               TTTTTTAATGTCCAG 100 59
   CKO_03170 2935137 .. 2935163 -  -5.8   -4.1673   GAAGCCGCGAATAAA         GTCTTCAACGGC GGT GCTGTTAAAGGC         TGGTAATTTTTAGGC  66 509
   CKO_03165 2931723 .. 2931737 -  -8.6  -3.12351   CTCTTTCAGAGTCAA               TCCTGA ATT TCAGGA               TTTTTCTCTTTAATC  65 169
   CKO_03159 2925917 .. 2925932 -    -4  -3.96624   CAGGCGCAGCACAAA              CG-CTTG TAG CAAGTCG              GCAACGTTGGGCGCT  58 267
   CKO_03156 NONE
   CKO_03155 NONE
   CKO_03154 2923067 .. 2923097 -   -17  -4.25074   GATTAAAGCGGAAAA       CAAAATCGCCGGTC AAT GACCGGCGATTTTT       TTATTTCTTTTCAAC 100 26
   CKO_03151 2918749 .. 2918774 - -19.1  -5.83211   GAGCAAAATAAAAAA         CGCCCCAGTCA TTAC TGACTGGGGCG          GCTAAAATATTCAGC 100 251
   CKO_03146 2916592 .. 2916626 - -12.9  -3.09784   CTACGGGTAATAAAC    CGGTTG-CGCAGCCAC TTCT GTCGCCGCGACAACCG     CTGTAGTTTAACGAA  82 110
   CKO_03145 2915009 .. 2915023 - -11.4  -3.91144   GCCACACGCCACAAA               CTGCGG TTG CCGCAG               TACTGTGTGCAGCGC  87 151
   CKO_03142 NONE
   CKO_03141 2910364 .. 2910412 -  -9.7  -2.90028   CGCACTACAAAACAG GATCACAGAGATCCTCCGCAA ACAAGTA TTGCAGAGTTTCTTTGTGATC GCTTTCACGGAGCGT  69 284
   CKO_03139 2908381 .. 2908398 - -12.7  -5.58179   CAGGATAATAAAAAA             GCCGCTG AAAT CAGCGGC              TTTTTGTTGCCGGAT 100 103
   CKO_03130 NONE
   CKO_03129 2897591 .. 2897612 - -13.1   -4.7657   CAAAAAGGTGAAAAA           GAACCGTCT AAAA AGACGGTTC            TGTTTATAACCCCTT 100 40
   CKO_03128 2894204 .. 2894222 - -14.6  -5.22039   CGCAAACGGAAAAAA             GGCGATGC AAT GCATCGCC             TTAACACTTTTTGCC 100 267
   CKO_03127 NONE
         rbn NONE
   CKO_03125 NONE
   CKO_03124 2891196 .. 2891209 -  -5.9  -4.27911   AAAATATCGAATAAA               GGAGG ATTA CCCCC                TTTATCCTACTCTTC  71 32
   CKO_03122 NONE
   CKO_03121 2890273 .. 2890283 -  -8.2   -3.1552   GCGCATGGAGCAAGA                 GGGC TTT GCCC                 GCAGCTCCATCAACC  60 106
   CKO_03115 2883406 .. 2883431 - -16.3  -2.65448   ATTAATATTCATAAC         TGCTCCCCATA GTAA TATGGGGAGCA          TCTACGATACGTGCA  90 47
   CKO_03114 NONE
   CKO_03113 NONE
   CKO_03112 2879595 .. 2879614 - -12.8  -4.13767   TTTGTGAGGTCAAAA            CCGGGGCA AAAC CGCCCCGG             TCGGCAGGATGAGAA  95 43
   CKO_03111 2878568 .. 2878578 -  -6.8  -3.61715   TAGTTGTTTTAATAA                 GGCA CCG TGCC                 TTGATGTGATAAATA  63 110
   CKO_03110 2878285 .. 2878299 -  -9.2  -5.42514   GCAGAAACGAAAAAA               GCGCCC TGA AGGCGC               TCTTTCGACAGTTTT 100 48
   CKO_03107 2876250 .. 2876260 -  -8.2  -3.67588   GAAAGCGTATTGAAA                 GCGC ATG GCGC                 GCATCACTATGCGAT  68 366
   CKO_03105 2874562 .. 2874572 -  -6.8  -2.52795   AACTGTGGGAAGGCA                 GCAC CGA GTGC                 CTGGTGGTGTTCCCG  51 323
   CKO_03101 2870931 .. 2870942 -  -5.8  -3.48558   AGAAATAGTAATTAA                GGGT TACT ACCC                 TCACCTTAAATTTTT  58 163
   CKO_03099 2870063 .. 2870073 -  -2.4  -3.16564   GCGTTACTGTAGCAA                 TGCG TCC CGCC                 CCTGGCGAATATCCC  43 3
   CKO_03098 2869580 .. 2869602 -    -4  -3.53811   TTCACTGCCGTTAAA           GCCCGGAATG GCG CTTTCCCAGC           CAAGATTCAGGGTCA  51 274
   CKO_03095 2868962 .. 2868973 -  -2.2   -4.6856   GAAAGAGTGGAAAAA                CG-CG GGT CGTCG                TCCTGTCAGCGTTCT  68 101
   CKO_03093 2866934 .. 2866960 - -20.9  -4.65263   AGCGCCTAAAAGAAA         GCCCCCGCAGG TTATG CCTGCGGGGGC         TGAATTCAATGCCGG 100 174
   CKO_03092 2865714 .. 2865726 -  -6.2  -3.37796   CCGGATGAGGCATAA                GCCG TCATC CGGC                AAAACGGGTTTATTT  59 35
   CKO_03090 2863803 .. 2863833 -  -8.8  -3.53012   CGCGGTTGGGTGAAA       GCCGAAGACAGCCC GCT GGGCGGCTTACGGC       TGGTGATCTGGCTGC  68 160
        cpxP 2861090 .. 2861108 - -14.6  -5.93809   TTTGGACAAAAAAAA             CCCCTCCA TCA TGGAGGGG             AAGACAGGGATGGTG 100 66
        fieF NONE
   CKO_03085 NONE
   CKO_03084 NONE
   CKO_03083 NONE
   CKO_03082 NONE
   CKO_03081 NONE
   CKO_03080 2855484 .. 2855512 -  -8.8  -3.16774   CCACACAAAATCACA       GGCCCGGTAAGCG TTAA CGCC-ACCGGGCT        TTTTTTACAAACGCC  68 30
   CKO_03077 2853228 .. 2853262 - -11.4  -3.53224   GATGCTGTGCGGAAA     TCCGCAGATGGTGCGT GAT ACGCAACAGCTGCTGA     AGGAGACCCGGCACA  77 172
   CKO_03074 NONE
   CKO_03073 2850564 .. 2850596 - -16.5  -2.83012   AATTTGATTACCATA      GAGTAATACCACTCC AAA AGAGCGGTATTACTC      GAATGTAAGACATGG 100 42
   CKO_03070 2847946 .. 2847961 -  -7.5  -4.07568   TGGTTTGTCGTAAAA              CGCGC TTCATG GCGCG               ATAACGCTCATTTTA  73 33
   CKO_03069 NONE
   CKO_03068 NONE
   CKO_03067 NONE
   CKO_03066 2846610 .. 2846627 -  -2.6  -2.67667   TTACTGATTAAACAG             GCGCGT TATGTG ATGCGC              GAAATGGAACCCGCT  38 133
   CKO_03055 NONE
        metL 2834417 .. 2834431 -  -2.9  -3.80461   TAACGCAGGAGGAAA               TTATC GAAGT GATAA               TGCAGATGGCGGTTT  54 186
   CKO_03052 NONE
        metF 2832068 .. 2832083 - -10.4  -5.25803   AATGTGCATAAAAAA              GCCCTC CGAA GAGGGC               TAATCATGTTACAGG 100 34
   CKO_03050 2829670 .. 2829688 - -11.7  -5.05601   CAGGAGAGACAAAAA             GCCCGCA GATCG TGCGGGC             TTTTTTTATTTGCCG 100 86
   CKO_03047 2825179 .. 2825189 -  -2.4  -4.93898   ATATCAGTACAAAAA                 TGCG ATC CGCC                 TCATAACTTATCAAA  70 129
   CKO_03045 2823906 .. 2823920 -  -5.7  -2.87132   TTCGGCCGCCATATA               GGTGT GTGCG ACACC               AGAAGGACATGCTGT  50 76
   CKO_03044 2823596 .. 2823632 -  -2.2  -3.14051   CTACGGGGATTAACA   TCGTAGGCCCGATAAGC TTGC GCC-ATCGGGCATTCTA    ACGTTAAGCAATTTG  43 29
        pflD NONE
   CKO_03042 NONE
   CKO_03041 2819962 .. 2819979 -  -5.5  -4.56597   CCTGTTTCGTAAAAA             TACGGAG CGTT CTCCGTC              AGAATATCGTCGGCA  73 70
        argC NONE
   CKO_03035 2811024 .. 2811035 -  -7.2  -3.30243   ACCCAGGCCCGATAA                GGCG TGGC CGCC                 ATCGGGCACAAAATA  61 43
   CKO_03034 2809533 .. 2809545 - -10.5  -3.30124   TTGTAGGCCGGATAA                GGCGG CAG CCGCC                ATCCGGCACAACGCC  77 43
   CKO_03032 2807967 .. 2807978 -  -5.8  -3.10522   ATCTTATTGAAGATA                TCCC TACC GGGA                 TTTACACCATCCCGG  52 361
   CKO_03029 NONE
   CKO_03028 2805699 .. 2805713 -  -8.5  -3.30124   TCGTAGGCCGGATAA               GGCGG TTACG CCGCC               ATCCGGCATTATTCC  67 34
   CKO_03027 2805357 .. 2805384 - -11.4  -3.45839   ACCTGGAAACATTAA        GCCAGACGC-ACA ATG TGTCACGTCTGGC        TCTGTTCGATCAGTT  79 35
        btuB 2802088 .. 2802100 -  -5.5  -3.90856   AACGCCGGAATCAAA                CACCA GCA CGGTG                GGACGTGGATCAGAA  63 35
   CKO_03024 2800846 .. 2800857 -  -5.8  -3.05816   CCACTCGTCAGCGAA                GCAG CAAG CTGC                 TTCCTGTTACCGTTC  52 482
        murB NONE
   CKO_03018 2793490 .. 2793505 - -10.4  -4.85195   AAAATAATGTAAAAA              GGGAGC CTTA GCTCCC               TTTTTATTATTCTGC 100 32
   CKO_03011 2790375 .. 2790397 -  -4.1  -2.72511   CGCATTGCGTCAAAT           GTTATCAGC GATTA GCCGAGAAC           TTTAGCAACCACGCC  45 14
   CKO_03010 2790217 .. 2790242 -  -4.7  -3.76952   GCGAGGCAATCCAAA         CCGAAATGC TCTGTGTT GCGTTTCGG          ACTAAACGCCCTCAG  59 27
        secE NONE
        nusG 2789152 .. 2789190 - -16.9  -4.84359   CCAGGCCCATAAAAA   CAAAAGGCGCGAAATTG TATTC CAATCTCGCGCCTTGTG   CAACGATTAAATCGC 100 59
        rplK NONE
        rplA 2787878 .. 2787914 -  -6.6  -4.20368   TTATTTCAACAGAAA   CGTGGG-GGTAAGATTG TAGA CAAAATCACCGCCCACG    TAAAGGCGAATATTA  72 38
        rplJ 2787068 .. 2787081 -  -3.8  -3.89695   GCGTTACAAAGATAA               CTGC GATTAA GCAG                CTTCTTTCGCATCGC  56 18
        rplL 2786577 .. 2786602 - -17.7  -4.64766   CTTACAGCGCAAAAA         GGCTGGTGACT AAAA AGTCACCAGCC          ATCAGCCTAATTTCT 100 65
        rpoB 2782245 .. 2782276 -  -9.3  -2.80816   GTCGGAGTTAGCACA      TTCCGCTGCCGGG TATTAC CCCGGCAGCAGTG       ACCTGTTTGAGCGAG  65 43
   CKO_03001 2777957 .. 2777970 -  -9.5  -5.64274   TCAGGCATAAAAAAA               CCCGC CGAA GCGGG                TTTTTTATTATGGTC 100 49
        nudC NONE
        hemE NONE
   CKO_02988 NONE
   CKO_02987 NONE
   CKO_02986 2766968 .. 2766983 - -11.8  -4.64844   GCCAGACAGACAAAA              GGGGCG AGAG CGCCCC               TTCATTAAAACTGTT 100 55
   CKO_02985 2766291 .. 2766303 -  -6.2  -3.21726   CCGGATAAGACGCAA                GCCG CCATC CGGC                AATCATCAGAACGTC  57 31
   CKO_02982 2762628 .. 2762639 -  -5.8  -3.73224   CCACTCGTCAGCAAA                GCAG CAAG CTGC                 TTCCTGTTACCGTTC  61 366
        dkgB 2756561 .. 2756578 -  -9.1  -4.68593   GCGATCATGTAAAAA             CAGCCCC CGAA GGAGCTG              TAAAAGAGGGTTAAG  89 64
   CKO_02974 2754533 .. 2754557 -  -5.7  -4.64861   TGTTTGCAAAATAAA         GGGCAGCACC ACTTCA GGC-CTGCCC          CACGGCAGACCTGAC  74 46
   CKO_02973 2753700 .. 2753722 - -10.6  -4.43844   GCATGACTCAGAAAA           GGCACTGG TTTCCCC CCAGTGCC           TTTTTTATTTATGCC  93 34
   CKO_02970 2750368 .. 2750380 -  -3.4  -5.14563   GCGGCCATGAAAAAA                CCTT TAGTG AAGG                ATATAGCCTCACAAC  79 377
   CKO_02968 2749227 .. 2749250 -   -14  -3.93057   GCTAAAACGACGAAA          GCCTGAATCA TTTC TGATTCAGGC           TTTCTGAATAGTGGC 100 247
        gmhA 2744945 .. 2744979 -  -7.9  -2.74747   GACAAATCAAATGTA    GGCCGGATAA-GACGC TTTA ACGTCGTCATCCGGCA     AAAACACAGTAAAGA  58 50
   CKO_02962 2743738 .. 2743749 -  -5.8  -3.15841   ATAAGGCCATTAATA                TCGG TTTT CCGA                 ACGCCTATGACCGCG  52 382
   CKO_02960 2741997 .. 2742034 - -12.1  -3.29144   TTATCCGGCCTACAA   CTAACCCGGCCTACA CGCTGATT TGTAGGCCGGATAAG    GCATTTACTCCGCCA  79 59
   CKO_02958 2739738 .. 2739762 - -17.9  -5.75342   TGCGGCTAAAAAAAA          CAACGCCCGGC ATT GCCAGGCGTTG          AAAATTTCAGTGATT 100 39
        frsA 2738438 .. 2738450 -  -6.3  -3.17586   AGCAATCCATTAACA                CAATC TGT GATTG                ATCCAACCAGTAATT  57 7
   CKO_02956 2737792 .. 2737804 -  -2.7  -4.46212   TCGTTGATTATAAAA                TCAAC CAG ATTGA                CGATGATAACAAGCT  64 197
   CKO_02953 NONE
        proA 2733732 .. 2733748 -  -2.2  -4.21142   ACTTCAAGATACAAA              CCAGCA CCATC TGCCAG              CTTGCAGGCTTTCTC  58 438
   CKO_02950 2733267 .. 2733283 -  -4.4  -3.72141   ATACTTATATTGAAA             CCCATCC AGGT GG-TGGG              GCTGTCATGCGCAAT  56 44
   CKO_02949 2732737 .. 2732751 -    -5  -3.34267   AATGGCAAATGAATA               GTGAAA TGC TCTCAC               CATCTTATGCAACAA  54 390
   CKO_02947 2731409 .. 2731426 -  -6.9  -2.66106   CAGGGCAACAATTCA             GGCCACC GATA GGCAGCC              TGCGGAGGGATATTA  55 38
   CKO_02946 2729722 .. 2729742 - -14.7  -4.08216   TTATGGTGTTTAAAA            CGCTCCCGC CAC GCAGGAGCG            TGAAGGCTTAGAACC 100 33
   CKO_02945 NONE
   CKO_02944 NONE
   CKO_02943 2725702 .. 2725715 -  -2.3  -3.02511   GCCACGGGTTTAACA               GACAC CTCA GAGTC                GTTTAAGATGGCTTA  42 162
   CKO_02942 2724298 .. 2724311 -  -2.3  -3.92746   CCGACTGGAAAAAGA               CGCTG GGGT CAGAG                TGGAGACAATATGAA  54 508
   CKO_02932 2714278 .. 2714294 - -12.3  -2.55351   CTGGCGTATACCAAC              CCGGAGT CGC ACTCCGG              CTATAACGCGGTACG  72 517
   CKO_02916 2700240 .. 2700252 -  -2.7  -3.55563   ACCTGATTGTGTAAA                TCAAT ATT ACTGA                ATGTAAGCATCAGAT  49 220
   CKO_02913 2698282 .. 2698297 -  -6.2  -3.53841   GAAATAAAGGCATAA              CCTTAT AAGC ATAAGG               AATATTTATGAAAAG  61 301
   CKO_02911 2696976 .. 2696986 -  -2.4  -3.85879   CACAACCGACAATAA                 GCGG CGA CAGC                 AAACTTTACTCCAAA  52 372
   CKO_02909 2695962 .. 2695973 -  -2.2  -5.16841   TGACAGCAATAAAAA                GGAT GGAT ACCC                 AATTTGCATGTAACG  73 83
   CKO_02908 2694072 .. 2694099 -  -5.6  -3.89524   AGGCCAGTCCACAAA        GCGGCTACTGG CAATTGT CCAGCA-CCGC        GGTATCGGCTGTAGT  63 264
   CKO_02907 2692756 .. 2692777 - -10.9  -3.95787   CAGGAGATCGACAAA           GGAGATCGC GATG ACGATCTCC            TTTCCCATAACGACA  87 45
   CKO_02899 2684887 .. 2684908 -  -3.7  -3.18912   TTATCCATTCATCAA           TCCTTCCTG GCCT CAGGAATAA            CATTCAATATCAATA  47 16
   CKO_02898 NONE
        fliF NONE
        fliG NONE
        fliH 2681043 .. 2681056 -  -3.7  -2.79823   CTCTTCAAAATCAAG               GCTGC TCAT GCGGC                GATTCCGGCAGCAAA  44 7
   CKO_02894 NONE
   CKO_02893 2679219 .. 2679238 -  -7.8  -2.72344   GCTGACGGTGAATCA            GCGTCCCC ATCA GAGAACGC             GAAGACGTTTGCGGG  58 69
   CKO_02892 NONE
   CKO_02891 NONE
   CKO_02890 2675797 .. 2675823 - -18.2   -3.1552   CGCTATTTAGCAATA         CGATTGGCTATG CCG CATAGCCAATCG         CTTTTACCAGATATT 100 72
   CKO_02887 2672695 .. 2672705 -  -2.4  -2.68947   CGCAATCAACAAGAG                 CAGC GCC GCAG                 AACAGACCCGCACTG  39 45
   CKO_02884 2672225 .. 2672244 -  -8.6  -2.71144   CACGCGCGGCAACTA            CCTCA-CCG ACC CGGATGAGG            CCATTGGGCTGACCG  57 266
   CKO_02882 NONE
        flgC NONE
        flgD NONE
   CKO_02879 NONE
        flgF NONE
        flgG 2667387 .. 2667408 -  -7.2  -2.75844   TCTTTCACTTTAAAG           CCCTGTCG TTACAT CGACTGGG            TGACAAACTTCAACA  55 12
        flgH NONE
        flgI NONE
        flgJ NONE
        flgK NONE
   CKO_02872 NONE
   CKO_02871 2661829 .. 2661852 - -13.8  -4.30416   AGCAGTAAGTCAAAA          CCGGAGGCGG AGGC CCGCTTCCGG           TTACGATAATCACCC 100 35
   CKO_02868 2659773 .. 2659785 -  -4.9  -4.37737   CAACGAAAAATTAAA                TTCAT TTA ATGAA                AATTTATTTAAAGAT  70 497
   CKO_02867 2658732 .. 2658755 -  -8.8  -5.76633   GCAGACACAAAAAAA          GCCGCACCCC GTGC AGGATGCAGC           GTCATAAGAACACAT 100 74
   CKO_02866 NONE
   CKO_02865 2657619 .. 2657636 -  -9.1  -4.96848   TGCCGGATACAAAAA             CACCGCC ATAC AGCGGTG              TTTTAGGGGCAGATA 100 52
   CKO_02863 NONE
   CKO_02862 NONE
   CKO_02861 NONE
   CKO_02859 2654345 .. 2654359 -  -2.8  -3.53012   TGTCTTTTTGTTAAA               CGGT CAGTAAT ACCG               AATCATCTTCGCGGC  49 6
   CKO_02858 NONE
   CKO_02856 NONE
   CKO_02855 NONE
   CKO_02854 2651242 .. 2651277 -  -5.4   -6.0427   ATGAGAGAAAAAAAA    GGTACCTG-GCGGCACA GAA CATGCCGGGCAGGTACA    AAACGGACAGAACGG 100 71
   CKO_02853 NONE
   CKO_02852 NONE
   CKO_02851 2648717 .. 2648746 - -14.5  -4.36914   CGCGGCGGCATAAAA       TAAAAAGGGAACC GCCG GGTTCCCTTTTCA        ACACTGGTGACGCGC 100 52
   CKO_02847 NONE
   CKO_02846 NONE
   CKO_02844 NONE
   CKO_02843 NONE
   CKO_02842 NONE
   CKO_02841 NONE
   CKO_02840 2637959 .. 2637976 -  -4.2  -3.08046   TCGTCACCTCAAAAG             TGAGAA TGATCG TTCTCA              TTTTGGCTAATTATA  47 78
   CKO_02838 2637328 .. 2637346 - -10.4  -3.91357   TCACAACGACAATAA             GGGAAATA ATT TATTTCCC             TTTGATTATTAAATT  84 47
   CKO_02837 NONE
   CKO_02836 NONE
   CKO_02835 NONE
   CKO_02834 2629916 .. 2629943 -  -5.4  -3.85698   TTGTGGTGGTACAAA        CCAGCCTCGCCTC CGG GCGTCG-GGCCGG        TGTATTAACGGGGCT  61 505
   CKO_02832 2629130 .. 2629143 -  -2.3   -4.4017   TTAACGGCGATAAAA               CCGCA GCGG CGCGA                TATCTGGGTATTAGC  62 233
        prpB 2626406 .. 2626443 -  -6.9  -2.57931   CGTAGGCCTGATAAG   GCGCAGCCGCCATCAGGC ATT GCCGGATGGCA-CTTCGT   TTATCCGGCCTACAG  55 43
   CKO_02829 NONE
        prpD NONE
        prpE NONE
   CKO_02826 2621458 .. 2621468 -  -8.2  -2.75074   TTCAGTTCAACATCA                 GCCG CTA CGGC                 CAGAAACAGCTGATG  57 181
        mmuM 2615927 .. 2615954 -  -7.6  -2.53995   ACGCAGTGTAATTGA        TGCCGGGT-GGCG CTA CGCTTACCCGGCC        TACGGTTCGCGCACG  58 81
   CKO_02816 2607876 .. 2607894 -  -6.1  -2.95073   TTGCTAATAGCAAAG             CGTTTTT AGAAA AAAAACG             GGAATGGTTAGTGTG  55 131
        tauA NONE
        tauB NONE
   CKO_02810 NONE
        tauD 2604265 .. 2604276 -  -7.2   -3.8211   TTCCAGGCAGAATAA                GGCG TTTA CGCC                 GCCATCCGGCGCGGT  66 122
   CKO_02806 NONE
   CKO_02805 2597923 .. 2597946 - -13.2  -3.14564   GCATCCTTGCATTAA          TGCCCGCCAT ATCC ATGACGGGCA           TTTCCTTTGATTAAA  83 69
   CKO_02804 2597104 .. 2597116 -  -4.7   -5.1101   GGATTATTCAAAAAA                CCGGC GGC GGCGG                TGGTTTCATCACCTA  80 189
   CKO_02802 NONE
   CKO_02801 NONE
   CKO_02800 2593209 .. 2593223 -  -8.6  -3.14132   CCTGGCGTTTATGAA               CATCTG ATG CAGATG               CAAGAGACCGGACGC  60 197
   CKO_02798 2592077 .. 2592105 -  -7.4  -2.70932   CGTGCTGGGCAACGA       TCAC-CCGCAGGC CAGC ACCTGCGGCGAGA        TCGTCCTGAACAGCG  55 490
   CKO_02796 2590588 .. 2590601 -  -3.7  -4.05446   TGCTTCAACGACAAA               GCCCG TATC CGCGC                ATACCGAGATGGAAA  59 1
   CKO_02795 NONE
   CKO_02794 NONE
   CKO_02793 2588215 .. 2588235 -  -5.4  -3.45592   AATCGGCATTAAATA            CCACCAGC GCCGG GCTGGTAA            TTTAGCAAGAGCGTT  56 67
   CKO_02792 NONE
   CKO_02791 2585783 .. 2585798 -  -5.4  -2.80077   CGCTGACAAAATGGA              GCGAAA CGTT TCTCGC               GAGAAAATAATTCAA  50 115
   CKO_02790 NONE
   CKO_02788 2583788 .. 2583814 - -16.7  -2.96723   ACGACGAAAATACCA         CCTGACGGCAA AAGTA TTGCCGTCAGG         AGTCCGTTTACTTCA 100 33
   CKO_02787 2583322 .. 2583355 -  -4.6  -3.86776   GAAGGAAGTATGAAA     TTTCGGGTGAG-TGA TTTTC TCAGCTCACCCGTTA     GCACTATGCGGATTT  58 29
        adrA 2582124 .. 2582139 -  -4.7  -4.23207   GAAAAATCAGAGAAA              CTCAG TAAGTC CTGAG               CCAGTTGCCGGACGT  67 40
   CKO_02784 2580570 .. 2580585 -  -4.6  -2.87132   GGCTTTCCCCAGAGA              GCCGCA AAGG TGCGGG               ATCTGATGTCATCAA  46 172
   CKO_02783 NONE
   CKO_02782 2579646 .. 2579656 -    -4   -3.5594   AATGCATTGTGTAAA                 GATT CCA AATC                 ACTCCAGTAGTATAT  53 156
   CKO_02781 NONE
   CKO_02780 NONE
   CKO_02779 2577982 .. 2577994 -  -3.3    -5.055   GCAAGCGCTAAAAAA                GCGGA AGA TACGC                TGGCGCTGCTGCGTA  76 439
   CKO_02777 NONE
   CKO_02776 NONE
   CKO_02772 2570966 .. 2571003 -  -9.7  -3.97088   CTTCAGAATAGTAAA   CCCGCCCGCCACACCGA GATG CCGGTCTGGCGGCAAGG    TATTAAAAACGGGTC  80 28
        phoR 2569595 .. 2569616 - -13.1  -4.88918   TTACTGCAAAGAAAA           TAAGCCAGC ATCC GCTGGCTTA            TGGAAAGCTAACCTT 100 52
   CKO_02770 NONE
   CKO_02769 2567870 .. 2567892 -   -17  -6.04419   AAAATAATAAAAAAA           CCACGGGGCC TGT AGCCCCGTGG           TTAAAACATACTGTC 100 48
        proY NONE
   CKO_02766 NONE
   CKO_02764 2564390 .. 2564404 -  -2.7  -2.90392   CATGGCGCAACCACA               GCGAC GGTCT GGCGC               AGCGCTGGTGGCGAG  42 78
   CKO_02762 NONE
   CKO_02760 NONE
   CKO_02759 2559103 .. 2559118 - -10.4  -5.15969   CTCGAATTGAAAAAA              GCTCGC TATG GCGAGC               TTTTTTATTGCGCTT 100 142
        queA 2556430 .. 2556457 -  -2.7  -2.74144   GTCTGACGTTTAAAC        CTGTGCCGCGAA CCTAC TTCCCGACAC-G        CTCATTCAAAGCCTG  41 11
         tgt 2555271 .. 2555285 -  -2.8  -2.71783   TTAAAATTAATCAAC               GTTCAA AGG TGGAAC               AGGTCGACCCTGACG  41 2
        yajC NONE
        secD NONE
        secF 2552005 .. 2552024 - -11.4  -5.64274   TTAGCGATAAAAAAA            TCCCGGCC ATGC GACCGGGA             TTCCAGTAATAACGT 100 51
   CKO_02751 2551507 .. 2551532 - -13.3  -3.61232   CCGGGCACAGAAAGA         GCACCGAACGCG CAA CGCG-CCGGTGC         TTTTTTATTTCTTCT  90 30
   CKO_02748 NONE
        ribD NONE
        ribH NONE
        nusB 2547016 .. 2547055 - -10.7  -5.61277   CAGAAAAAAAGAAAA  GGCCGG-AGATAGCGGGA ATACA TCCCGCCACCAGCCGACC  TGGAGATTACTTTTT 100 32
   CKO_02744 NONE
   CKO_02743 2545193 .. 2545204 -  -5.8   -3.0263   ATGAGTTCGGCAAGA                CGCT GTAC AGCG                 AGAGCGATGAGAATG  52 337
   CKO_02738 2539667 .. 2539678 -  -7.2  -3.30124   GCGTAGGCCGGATAA                GGCG GTTA CGCC                 GTCATCCGGCAATAC  61 90
   CKO_02735 2537469 .. 2537500 -  -8.1  -3.28791   AGGCTGGCGTGAGAA     GTGCCGGAT--GGCGG CTA CCGCCTTATCCGGC-C     TACAAGACCGCATTG  65 82
   CKO_02726 NONE
   CKO_02725 2527882 .. 2527895 -  -9.5  -5.23292   TCAGACAAAACAAAA               CGGCC CGCA GGCCG                TTTTCACATAATCTG 100 85
         tig 2526251 .. 2526274 -   -16  -5.93809   GCGTGACAAAAAAAA          GCCCGCCACC TGGA GGTGACGGGC           TCTTGTGCGAATTTC 100 60
   CKO_02723 2525416 .. 2525432 -  -2.2  -2.84634   CTGGATAGTATTATA             GCGGCAC ACCT GCGCC-C              TGGGCATCAATTACG  40 32
        clpX 2523985 .. 2524003 -  -8.8   -5.2853   TACGGAAAAATAAAA             GGGGGGAT AAA ATCCCCCT             TTTTCGTTAACTGAT 100 57
   CKO_02721 2521435 .. 2521464 - -11.5  -5.72616   AGCTATACAAAAAAA       GGCTGGCA-AGCAC GAA ATGCCCTGCCAGCC       CTGTTTTTCTTAGCG 100 58
   CKO_02720 2520960 .. 2520979 -   -10  -5.72622   TGGACAAATAAAAAA            GGCACATC AGAT GATGCGCC             CTTGTACTTTGTCAC 100 61
   CKO_02719 2518857 .. 2518872 - -11.8  -4.40173   ATCAGAAATGGAAAA              GGCCGC GAAG GCGGCC               TTTGAGGGTTACAAC 100 73
   CKO_02718 2518338 .. 2518360 -  -8.5  -3.19602   GTTGTTATAGGAACA           GAGGCCATA ACTGG TATGACCTC           ATTATCCTGGCAAAC  65 61
   CKO_02717 2517752 .. 2517767 -  -4.6  -3.86015   TATCTGGCGGATAAA              CCGGCA GTGA TGGCGG               CAATGAAGCAGAAAA  58 163
   CKO_02714 2514380 .. 2514400 -  -9.7  -5.61596   AGCGGCATAAAAAAA            GCCAGGC TTTACGG GCCTGGC            TTGCTGGAAAGGATC 100 43
   CKO_02712 2512626 .. 2512657 -  -3.5  -3.51091   GATAATGATAAGCAA      GGCCACGGCGCCG AGATAG CGACGCCACTCCC       GACGGAAGTACCAGC  51 107
   CKO_02711 NONE
   CKO_02710 2509140 .. 2509163 - -10.2  -3.30124   CCGTAGGCCTGATAA          GCGCAGCACC ATCA GGCGCTGAGC           GATTCCTCACGCGCG  77 13
   CKO_02708 NONE
   CKO_02707 2507192 .. 2507229 - -25.7  -4.28432   AATCGCAATTGAAAA   TGGCCGAATGGCGACGC AAAA GCGTCGCCATTCGGCCT    GTTGATGATCAGGCG 100 34
   CKO_02705 2505508 .. 2505527 - -13.6  -3.18264   CGCTGGATTTATTAA            CCCTCTCC GGCC GGAGAGGG             TTGTCCTGTGAGAGC  86 41
   CKO_02702 NONE
   CKO_02701 2504214 .. 2504237 -  -9.6  -3.34962   GCCGATATGGGACAA          CCTGCGCT CACAAAAC AGCGCAGG           GAAAATACGCAAAAT  73 68
   CKO_02699 NONE
   CKO_02698 2501662 .. 2501697 -  -6.1  -2.62656   AAACGGATTTAGAAT   GGGGAC-GGCTG-GCGG CACG CCGCACAGCCTGTCGCT    TCAGTCATCCAGAAT  53 26
       rpmE2 NONE
   CKO_02695 2499429 .. 2499452 - -10.3  -4.70659   TTGCAGATGTAAAAA          GTGCGTACC GTCCCT GGCACGCAC           TGTAGTCCCTGCAAT  93 53
   CKO_02687 2491778 .. 2491798 -  -4.8   -4.2803   TAGCGGAACGGAAAA           TGTCCAGGA TAAT TCCTGGA-A            TGATATCAGGGGCTT  67 31
   CKO_02686 2488291 .. 2488315 - -17.9  -3.02471   CTCCCATTAGAGACA          CTCAGGGCGGC CTG GCCGCCCTGAA          CAGAACTTAGCCCAC 100 32
   CKO_02685 2487059 .. 2487074 -  -7.5  -3.66166   GCTGGAAAAAATAGA              GCGCG TACTGG CGCGC               CTGACCCGTTAACCA  69 80
   CKO_02681 NONE
   CKO_02680 2485271 .. 2485295 - -11.5  -3.09492   GGGGGAATGCTAACA          CAACCTCGC AAATACA GCGAGGTTG          TGAGGCTTTATTCGC  75 140
   CKO_02679 2483276 .. 2483294 -  -9.6  -3.30124   CTTGATGGTTTACAA             TCGCAAGC CGG GCTTACGA             TCAAATGGGGCGAAT  73 26
   CKO_02678 2482927 .. 2482940 -  -2.3  -2.64099   GGTTTGCATCAGAAC               GGCAT CTTA AAGCC                AGGCGGCAGTTGCAT  39 5
        recR 2482277 .. 2482318 -  -4.4  -2.92613   GGGGACGGGAAATGA GTTTTCAAGCGGGAGAAC GCGAAT GTTCTCCCGTTTGATTAA  AAACGAATCTTATGA  46 22
   CKO_02676 2480239 .. 2480266 -  -2.6  -5.86976   GGATAAAATAAAAAA        TGCCCAAT-GGCG CTG CGCTTATCGGGCC        TACATAAGCAACCTG  95 90
         adk 2479411 .. 2479440 - -13.7   -2.7119   AGGTAAGATGAGAAT       TTGCCCGATAAGCG CAG CGC-CATCGGGCAA       TTTACGGATTAACCG  83 34
        hemH 2478197 .. 2478217 -  -3.3  -2.79796   CGTTACTTGATGACA           GCCGTCTG CTGCAC CAGACG-C            TCCAGGCGCATAATC  41 168
   CKO_02672 2475881 .. 2475919 -  -8.9  -2.71011   ATGGCGGTGTAATCA   CCTTATCCGGCCTACGA TTTTC TTGTAGGCCCGATAAGC   GCAACGCCATCGGGC  64 47
        ushA 2470650 .. 2470683 -    -6  -3.60098   ACGCGCCAGCCCAAA     CGTTCGCCACCA TTTATGTTTC CGGCGGCAAACG      CGGGCTGGACATCGA  57 189
   CKO_02653 2453949 .. 2453970 -  -3.6  -3.55444   GCTTTATTCTGGAAA           CCGCG-CTG GTCAA CGGACGCGG           CCACATGCGCGTCGG  51 144
   CKO_02650 NONE
   CKO_02649 2450642 .. 2450660 -  -6.6  -4.25104   GCTCTCTCATCAAAA             CAGCGAGC TCG GCCTGCTG             CTGGCGGAAACCCAG  74 494
   CKO_02645 2448054 .. 2448067 -  -2.3  -2.82623   TTCGCGCCAGAACCA               GCGTG CAAT CATGC                CTCCTCCTGCAACTG  40 20
   CKO_02644 2445417 .. 2445435 -  -8.8  -5.15969   CGGCAACGTAAAAAA             CAACGGGC ATA GCCCGCTA             ACTATTTAGCAATTA 100 241
   CKO_02643 NONE
   CKO_02642 NONE
   CKO_02640 2443041 .. 2443058 -  -8.4  -4.26189   TCAGAAATGCGAAAA             GGGCAG TCGCCG CTGCCC              CGTTAATTCCCTTGC  79 48
   CKO_02639 NONE
   CKO_02638 2441229 .. 2441252 - -13.2  -4.68655   CAACTGGAAAAGAAA          GCCGCGAAAA TCGT CTTTCGCGGC           ATATGGCAGGACGTT 100 123
   CKO_02633 2437075 .. 2437086 -  -4.4  -2.73771   GTATGATACATATTA                TTCG TAAT CGAA                 GCAGCACACTTTGCG  45 65
        cysS 2435278 .. 2435292 -  -7.1  -4.20932   AACACTTATCGAAAA               CACGC TACAG GCGTG               CGTTGAATATCACGA  70 369
   CKO_02628 NONE
   CKO_02627 NONE
   CKO_02626 NONE
   CKO_02625 NONE
   CKO_02624 NONE
   CKO_02623 2427457 .. 2427467 -    -4  -4.21676   ATAACGCAGTGAAAA                 TGAT CTT ATCA                 GGATATTCTTTTTTT  60 348
   CKO_02619 2423658 .. 2423682 -  -7.1  -4.10161   GATTACCGTTGAAAA          TCCCGGCGC CCCCATT GCGCCAGAA          CATTTACCGCGCCTG  70 486
   CKO_02614 NONE
   CKO_02613 2419737 .. 2419762 -  -9.7  -3.86897   GTTACGCGGGAGAAA         TGCCCGCGCTT CTGT AAACCCGGGCA          AGAACAAAGAGACAG  80 51
   CKO_02612 NONE
   CKO_02611 NONE
   CKO_02610 2414795 .. 2414806 -    -3  -5.04597   ATTGATACATAAAAA                CATT CATA AATG                 ATTAAAGTTAGCGTA  72 248
   CKO_02609 NONE
   CKO_02608 2413559 .. 2413584 - -11.9  -3.17392   GATGGTTCAACTTAA         CCAGGCCAGGCA GAA TGCC-GACCTGG         CCACGATCCGTTCGC  78 372
   CKO_02606 2411156 .. 2411196 - -11.3  -2.64912   GCCGCAAGGCACAAT CCTCAGGGATGCGCCAGGCA TCCC TGCCTGACGC--CCC-GAGG CGACGCTATTTATTA  73 38
   CKO_02605 2409565 .. 2409577 -  -7.7  -4.80453   CGATTACAAAACAAA                GATCC TGC GGATC                AAATAAGAATTGCGA  86 137
   CKO_02603 NONE
   CKO_02602 NONE
   CKO_02601 2406030 .. 2406043 -  -8.1  -4.46926   GAGGCTACCATAAAA               TCGCC CTCC GGCGA                ACCGGGCGAAGGTTT  81 39
   CKO_02600 2404501 .. 2404523 -  -2.5  -4.57569   GGACTCTTTCAAAAA           CTGGAGCGG CATGT CCGCCTCTG           GCGGTCGCCGAATTA  65 501
   CKO_02597 2400989 .. 2401005 -  -5.8  -3.53811   GCTACGCTGCCGAAA              TCCCGC CTGCC GCAGGA              AACCACCCTGACGGA  58 287
   CKO_02592 NONE
   CKO_02591 NONE
   CKO_02590 2397398 .. 2397410 -  -4.1  -4.62069   CGGCGATGCGAAAAA                CACCT TTA AAGTG                CCGGCGGTGGATCTG  69 208
   CKO_02588 2393611 .. 2393648 -  -5.6  -4.07568   GGTGCTGGCGCAAAA   GCTGGTTGCGA-CCTTC CATTT AATGGATCTCAACCAGC   TTTACACCCTGCTGT  66 55
   CKO_02587 2393336 .. 2393353 -  -2.6  -4.64766   CCTACAGGTGAAAAA             CGGGCT GAATGA AGCGCG              GCAGATGCGGGAGTT  65 101
   CKO_02581 2386045 .. 2386086 - -12.5  -3.65046   CCTCCATGCGAAGAA GAGACTAACAAGCCGAA TTGTCGTG TTCGGGTTGTTAGCCTC  AAGGTTGACGGAACT  88 65
   CKO_02577 2381486 .. 2381499 -  -2.3  -3.04398   CCTGTCGTGGAAAAT               CGCCA GCTA CAGCG                TGTCGGTTAACGGTT  42 18
   CKO_02576 NONE
        entF 2377293 .. 2377321 -  -9.7   -5.4659   GAAGACAAATAAAAA        GCCCATAATAATT GGT AGCTATTATGGGC        ATCAGTAGAATTAGA 100 67
   CKO_02574 2375523 .. 2375534 -  -5.8  -3.64822   ACCTGGCGACGCAAA                GCGT GGAC ACGC                 TTTCCGGCGGGCAGC  60 466
   CKO_02570 2371505 .. 2371516 -  -5.8  -4.07568   GCTTGGCGGGGAAAA                CCTG GCAG CAGG                 TCTGAACGGCGAAGC  67 259
   CKO_02568 NONE
        entE NONE
   CKO_02566 NONE
   CKO_02565 NONE
   CKO_02564 NONE
   CKO_02563 2363406 .. 2363429 -   -11  -2.78798   ACCTGTGACGCAAAT          GCCCTCTCCC GTTA AGAAGAGGGC           CGCTTATTTAAAAAT  74 40
   CKO_02562 NONE
   CKO_02561 2362810 .. 2362828 -  -4.4  -3.54424   CCGTATTGCCGCAAA             CCGAGAAG TTT CTGCACGG             CACCAAAGTGGCTTA  52 319
   CKO_02559 2360652 .. 2360686 -  -2.1  -4.41348   TGCGTCTGAAACAAA     TCAACGGCCTACA GGAACTCTT TGCCGACCGTCGA     TTCTCCAAAGCCTGG  62 53
   CKO_02554 2355751 .. 2355767 - -13.7  -5.00616   TGGTGCTGGAAAAAA              CGGGTGC GAC GCACCCG              CTTAAGGATTAATTC 100 162
   CKO_02552 2354048 .. 2354068 - -16.9  -5.40072   TGTTGCGTAAAAAAA            GAGGCTGCC ATT GGCAGCCTC            TTGCATTGCAGGTGT 100 56
   CKO_02550 2353271 .. 2353291 - -11.2  -2.87564   TCACCCGTTTACACA            GAGGATGC TCCCT GCATCCTC            TTTCCGAAAATCACC  74 220
   CKO_02540 NONE
        dpiA NONE
   CKO_02538 2341455 .. 2341470 -    -4  -3.10344   CGCGGATTCAATACA              CAGAAA GTCT TTTCCG               GTCTGGAAGTCGCGT  47 464
   CKO_02536 NONE
        pagP 2339562 .. 2339577 -  -4.7  -4.28994   TATCACTCATCAAAA              CTGGA AACGCA TCCAG               GCAAAGTAGACGTTA  67 4
        cspE 2339118 .. 2339133 - -11.8  -5.70829   AAGAGCATAAAAAAA              CCCGCC AGTT GGCGGG               TTTTGGAATTCTTGC 100 51
   CKO_02532 2337850 .. 2337863 -  -6.7  -3.91801   AAAACATCATAATAA               TTGCG GTGG CGCAA                AACGACGGTTACGTA  66 3
        tatE 2337444 .. 2337459 -  -7.5  -5.31456   TTAACGCATAAAAAA              CCCGC TTAAAC GCGGG               TTTTTTCTCTTCAGA  95 74
   CKO_02525 2332089 .. 2332120 -    -5  -4.11394   ATTCGACGCTGAAAA      GC-GATGACCCGAGC GGC GCACCGGTCAACAGC      AGCGGCTTCCTTGGC  65 395
   CKO_02518 2325312 .. 2325323 -  -5.8   -2.5742   GTGAAAGAGCAACAT                CAGC AGTG GCTG                 GAGCGCCATTTAACC  49 192
   CKO_02513 2319902 .. 2319914 -  -9.1  -3.30124   TTGTAGGCCGGATAA                GACGC TTC GCGTC                GCCATCCGGCACTGC  70 44
        ubiF 2308097 .. 2308112 - -10.4  -5.22312   AGCCACATTAAAAAA              GCTCGC TTCG GCGAGC               TTTTTGCTTTTCTGT 100 101
   CKO_02485 NONE
   CKO_02484 2298621 .. 2298642 -  -4.4  -3.49938   GTAAACAACGTATAA           CGGCATAT GATCTT ATAAGCCG            GACAGACTGACAACC  53 141
   CKO_02482 2296878 .. 2296894 - -13.7  -5.75599   GAAAGGATAAAAAAA              CGCCGCA AAA TGCGGCG              TTGGAAGGTGATGCG 100 52
   CKO_02481 NONE
   CKO_02480 NONE
   CKO_02479 NONE
   CKO_02478 2294646 .. 2294669 - -18.2  -4.05875   CTTAAAAAACGCAAA          CGGGCGGAGA GAAC TCTCCGCCCG           CCATTAACCCGCCCT 100 45
   CKO_02472 NONE
   CKO_02471 2289462 .. 2289488 - -10.1  -5.76949   CACGGTTAAAAAAAA        GCCCGGT-GGCG CTAA CGCTTACCGGGC         CTACGATCGTTGTTG 100 82
   CKO_02468 2285356 .. 2285381 -  -8.5  -2.80016   TTTTATCATTAACCA         CACTGCAAA-TA ATG TATTTTGCAGTG         TAAGCTCATTCCTTA  62 31
   CKO_02461 2276969 .. 2276989 -  -7.6  -6.24157   ACGTATAAAAAAAAA           CCGCC-ACA TTTC TGTTGGCGG            TTTTCTCGGACGATG 100 48
   CKO_02460 2276701 .. 2276722 -  -5.1  -2.90941   ATCAGACCTCACAGA           GCG-CGTTTG ATG CAAGCGGCGC           GATCAACTACGCCAT  49 122
   CKO_02458 2274331 .. 2274344 -  -6.7  -3.69482   TCACCTAACAGATAA               CAACG CGCT CGTTG                CACTTTCGTCCCTCT  64 54
   CKO_02457 NONE
   CKO_02456 NONE
   CKO_02455 NONE
   CKO_02454 NONE
   CKO_02453 NONE
   CKO_02452 NONE
   CKO_02451 2268754 .. 2268765 -  -7.2  -3.30124   CTGTAGGCCGGATAA                GGCG AAGC CGCC                 ATCCGGCGCGTTGAC  61 44
   CKO_02449 NONE
   CKO_02448 NONE
   CKO_02447 2263341 .. 2263385 -  -5.2  -4.70534   GAAACAGAGATAAAA TCTCCCCCTGCTAACTGAATA GCAT TATT-ATTTAACAGGAGGAGT GGGATATTACCAGTA  72 32
   CKO_02446 2262396 .. 2262408 -  -6.2  -3.14132   CGCCGCCGGTAGCAA                CGCC GACAT GGCG                CTGATTATGGCGATG  52 136
        sdhC 2255270 .. 2255283 -  -3.1  -2.78384   GCGTTGCTTACCATA               CG-AGG ACT CCTGCG               AGAAGTGAAAGCACG  42 4
        sdhD NONE
        sdhA NONE
        sdhB 2252349 .. 2252385 -  -8.8  -3.03124   CGCCATCGGGCAATA   TATGCCGGATGACGACG CCAA CGTCTT-ATCCGGCCTA    CGGGACTGTCATTTA  67 63
        sucA NONE
   CKO_02433 2248020 .. 2248053 -  -4.3  -3.21924   GTAGGCCTGATAAGA     CGCGGCTGCGTCGCC ATCA GGCATCTCACCAGCG      CCTTATCCGGCCTAC  49 65
   CKO_02432 NONE
        sucC NONE
   CKO_02429 2245851 .. 2245909 -  -2.2  -2.75081   CATGTCGAAAACGGA CCAGCCCTGCATCCTTCGCGCTTCAGG TATTCC CCTGTCGCACGAAGGAGTC-GGGCCTT ATTGCTGCTTTTTGA  39 44
   CKO_02428 NONE
   CKO_02427 2244408 .. 2244418 -  -8.2  -3.30124   TTGTAGGCCGGATAA                 GGCC ATC GGCC                 GCCATCCGGCATCAG  67 37
   CKO_02426 2243679 .. 2243703 -    -5    -4.564   AACGGTAAAGGAAAA         TCGACGGCGGCC TTT GGC-ACCG-CGA         CCCGCGCGGTCGGTC  73 514
   CKO_02423 2239919 .. 2239934 -  -5.4  -3.07113   TATCACCTGATTGAA              GCGAGCG ACG CGCT-GC              AATTTGATTTCCACC  50 451
   CKO_02414 NONE
   CKO_02413 2228067 .. 2228091 - -17.3  -3.62046   TTATTCCGTTAACAA          TAAAGCCACGC TAA GCGTGGCTTTA          ATCTGTTTGTCTGAG 100 43
   CKO_02410 NONE
   CKO_02409 NONE
   CKO_02408 NONE
   CKO_02406 2224236 .. 2224261 -  -9.9  -4.82154   AAGGGAGAGTAAAAA         TTTATGGGCTT ATGA AAACCCATAAA          TTTTTAAGGATACTT 100 46
   CKO_02405 NONE
   CKO_02404 NONE
   CKO_02403 NONE
   CKO_02402 2221690 .. 2221703 -  -3.7  -2.76162   TACCGGAGCTTAAAT               CGCCC AACA GGTCG                TCGACGCCAGATGCG  44 119
   CKO_02401 2221261 .. 2221286 -  -2.5  -4.74013   CTCAAATACACAAAA         CTACCAGAACC CAGC GACTCCCGTAG          CGTTTCTTTCCCCGC  67 61
        tolB NONE
   CKO_02399 2219327 .. 2219338 -  -2.2  -2.52896   TGATGTCTGAAGTTA                CTGC TCAT GCAA                 TTCTCTTAGTAAACC  39 31
   CKO_02398 2218497 .. 2218544 -  -9.9  -3.15579   TCAACTGCTTAGGAA TCGCACGACGAGACCAGAAAT AACGCG ATTTCTGGTCGCGTGGTGTGC ATTACATCGCGTTAA  71 27
   CKO_02391 2217333 .. 2217345 -  -5.5  -4.10781   AATAACCGATATAAA                GCGTA ACC CACGC                CACAATCGGTTAAAT  66 53
   CKO_02390 NONE
   CKO_02389 2215449 .. 2215484 - -17.6   -3.0263   ATCAGCCGTGCAACA    GGCCGGACTGCCACCTG AAT CAGG-GGCTATCCGGCC    ATTCGCATCATCACC 100 42
   CKO_02386 2212656 .. 2212672 -  -6.5  -5.67063   GTTAGTAGAAAAAAA              CCGGC CTGATTT GCCGG              TTTTTCAATTGCGCA  93 61
   CKO_02385 NONE
   CKO_02384 NONE
   CKO_02383 2208287 .. 2208304 -  -2.6  -2.78715   AACCCGCTCATGACA             TGCTCC CCCGGT GGCGCA              AAATAATGCTCAGGA  42 0
   CKO_02382 2207475 .. 2207487 -  -6.2  -3.30124   CTGTAGGCCGGATAA                GGCG TAAGC CGCC                ATCCGGCAATACATG  59 44
   CKO_02380 2206443 .. 2206472 - -13.6  -3.38272   GACGATGAGCCATAA       CAGGCCCGATGG TGCCAG CTATCGGGCCTG        TGGCGCGTCGCTTTG  90 57
   CKO_02373 2199320 .. 2199337 -  -9.8  -4.67942   TCGAAGAAAGTAAAA             CGCCCG ACTGAG CGGGCG              TTTAAAAATCAATGG  93 34
        modA NONE
        modB NONE
        modC 2196363 .. 2196377 -  -4.2  -3.95456   AAAGGGAACAGCAAA               GGGAAG CGC CTTACC               CAGTGGATTGAAGCG  60 230
   CKO_02368 2194546 .. 2194575 -  -2.7  -3.95324   CAGCGGCAACAATAA       CGCAGTATCCGGCC GAC GGCCCGGTAA-GCG       AGCGCCACCGGGCAC  54 54
   CKO_02366 NONE
   CKO_02364 NONE
   CKO_02363 2188457 .. 2188491 - -20.2  -3.88029   AGGCCAGATAAAAGA     GAAAAGGTCGTCACGC CGG GCGTGACGACCTTTTT     TTACATCTGACGGTT 100 26
   CKO_02360 NONE
   CKO_02359 2184747 .. 2184761 -  -2.1  -3.16935   AAACATCGCGATTAA              CGCCAC CCGT GTG-CG               ATTTGCCAGCCGAGG  43 7
   CKO_02358 2183853 .. 2183863 -  -5.4  -3.48593   TACTTGTCTATACAA                 CTTG TCG CAAG                 GCTGATTTTAACAAC  58 97
   CKO_02357 NONE
   CKO_02356 2180514 .. 2180566 - -15.6  -2.75963   ATGGCGACGCTAAAG CGTCTTATCCGGCCTGCGGCACCTG ACAT CCAGCGCCGTAGGTCGGATAAG-CG TCAGCGCCATCCGGC  93 47
   CKO_02353 NONE
   CKO_02352 NONE
   CKO_02351 NONE
        bioD 2174778 .. 2174802 -  -8.7  -2.80761   ACTCTAATACACAAG          GTTATCCAC AGGAATG GTGGATAAC          TGCGTCCAGCCCGTA  60 175
   CKO_02348 2172336 .. 2172348 -  -5.5  -3.30124   CCGTAGGCCGGATAA                GACGC TTT ACGTC                GCCATCCGCCATCGT  52 40
        moaA NONE
   CKO_02344 NONE
        moaC NONE
        moaD NONE
        moaE 2168211 .. 2168229 -  -3.1  -2.77522   ATACCCCTGAATAAG             GGTATCA CATTC TGCTACC             AGCGTTTTGCCGCCT  42 21
   CKO_02340 2167046 .. 2167059 -  -2.3  -3.64703   CTTCCGTCATGGAAA               TTCGC CCTC GCGCA                GATGGGGATTTCCAG  50 435
   CKO_02336 2163492 .. 2163502 -  -8.2  -3.57263   ATTTTCATCGGTAAA                 GCGG TGC CCGC                 GCTGATTGTCGCCAC  65 417
   CKO_02330 2156576 .. 2156595 - -12.8  -5.26119   GTCGCAAAAAGAAAA            GCCCGACC TTTC GGCCGGGC             TCGCAATTAATCCGC 100 32
        dinG 2154136 .. 2154165 -  -4.1  -3.05294   CCAAATTTGCTAACA       GCGGCAGCGCGAA AGGG CTTGCGCTGGAGC        TGGCCGATCGGCAGG  45 188
   CKO_02322 2147764 .. 2147781 -  -3.4  -4.59773   CCTGACGCTTAAAAA             TGCTGCG CTACC CGC-GCA             AGCCCTTCCGTTAAC  67 1
   CKO_02320 2146541 .. 2146557 -  -3.6  -4.86033   AAACTGGCAGAAAAA              GCGCGT GAACA AGGCGC              CAAAGGTTTTGTCGT  75 138
   CKO_02317 NONE
   CKO_02316 2144613 .. 2144655 -  -9.3  -2.96882   TGAAAGATATAATTA CCGGC-GTATTCATCCAGTT TGAA AACGGGATGAATACCGGCGA TCTGGTGACTATCGG  62 524
   CKO_02313 2141043 .. 2141057 -  -4.2  -4.26292   AACATCAAAACCAAA               GATCTG CGT CAGTTC               CCGAACATCGATAAC  66 291
   CKO_02306 2138218 .. 2138228 -    -4  -3.36059   TAAGTTATAAATATA                 TCAA AAA TTGA                 TGAGAAACTCTTTGC  51 15
        ompX 2137618 .. 2137635 - -12.7   -6.0427   ATCAGACAAAAAAAA             TCCGCCC CGAG GGGCGGA              TTTTTCATATCACCG 100 47
   CKO_02301 NONE
   CKO_02300 2133404 .. 2133419 -  -4.6  -4.07568   GTTCCTGTTTGAAAA              TGTGCC GGTC GGCACC               CGCGTACAGTTTATC  62 340
   CKO_02298 2130789 .. 2130799 -  -6.8  -4.56597   CCGGCGGGGGAAAAA                 CGCA CGC TGCG                 GGTGAATGGCGTTGA  78 145
   CKO_02295 2125679 .. 2125693 -    -7  -3.53343   AAGCCGCGCTGGAAA               CGGGCG CAT CGCCAG               GCGATTTCCCGCGTG  60 120
   CKO_02293 2122834 .. 2122844 -  -2.4  -4.18018   CCTTTGCAGTCAAAA                 CAGG CCG CCAG                 TGGTGACTGGACGCT  56 399
   CKO_02291 2122145 .. 2122155 -  -2.4  -4.18018   CCTTTGCAGTCAAAA                 CAGG CCG CCAG                 TGGTGACTGGACGCT  56 330
   CKO_02285 2115725 .. 2115738 -  -6.7  -2.64155   CGTCGCTCAAAGTGA               CGTTC GTCC GAACG                CGCCCTGCCAGTCGT  53 3
   CKO_02284 2115394 .. 2115410 -  -6.5  -3.07443   TTACAGGCGATGGAA              GCCATCA AAT TGCTGGC              GCATTACGGTCAACC  55 99
   CKO_02281 NONE
   CKO_02280 2110516 .. 2110527 -  -3.6  -3.91412   ATGAGATGTTATAAA                CGCG ATAA CGCA                 TTTTCTGCCTGCGGG  56 7
   CKO_02279 2108872 .. 2108917 -    -7  -2.78996   GATGGCGACGTAAAT CCCTTATCCGACCTGCA-ACG AACTG CGTCTGCAAGCCGGATAAAAC CATCGGGCGCGCGTT  56 43
   CKO_02278 NONE
   CKO_02277 2106921 .. 2106934 -  -8.1  -3.30124   CCGTAGGCCGGATAA               GACGC TTCA GCGTC                GCCATCAGGCATTGC  67 86
   CKO_02275 NONE
   CKO_02274 NONE
        bssR 2104921 .. 2104938 - -12.7  -4.48175   AAAACTTAACGAAAA             GGGGGAG TCGC CTCCCCC              TGACTTAGACCTGTT 100 30
   CKO_02272 2103705 .. 2103718 -  -3.1  -4.07568   CGGCGTTTCGTAAAA               CGGTGA TGA TC-CCG               GTCAGCTAAGCGCGT  56 31
   CKO_02270 2101426 .. 2101447 -  -5.1  -3.34517   ACTGCCGGTGAAACA           CTGGGCCAT GTCG ATGGCGCAA            TACCATGTTCTGGTG  53 232
   CKO_02267 2098468 .. 2098495 - -12.6  -4.18018   TTTTGCGATGGAAAA        CGCCGGAGCGGC GGTG GCCTCTGCGGCG         AAATATCGGGCGGGC  95 150
   CKO_02264 NONE
   CKO_02263 2095665 .. 2095688 -  -5.3  -3.13403   CGGCGCGCAGCAACA          TTCCGGCAT TAGGCT ATGCGGGAA           CCTATGCGATAGCCA  50 267
   CKO_02259 2093340 .. 2093355 -  -6.8  -3.36228   TCGATCAGAAACACA              TCGGCG GTTA CACCGA               TTTTGAGGCTTGGGC  58 99
   CKO_02257 NONE
   CKO_02256 2091944 .. 2091962 -  -5.2  -3.06341   AAGACCTGGTAAAAG             CCTGCGTA TCA TACACCGG             GTGTTAGCGCGTCGC  50 29
   CKO_02255 2090975 .. 2090994 -  -3.5  -4.66609   CAGCTTACGCAAAAA            GACCGCG TCATAC CACGATC             GGGAACGATATTGCG  67 42
   CKO_02254 2090382 .. 2090404 - -11.3  -3.61925   AAAAAAATGCAAACA           GCAGCCGCT CTGGC AGCGACTGC           GTTATACGCGTCATT  82 65
   CKO_02253 2088867 .. 2088901 - -11.4   -2.5639   ACGCACCATAAAAGT     GCGCATTGCCCGGTAA ACC TCACCGGGCAACGTTC     TGATACAGCGGCTTA  73 38
        potG NONE
   CKO_02251 NONE
   CKO_02250 NONE
   CKO_02249 NONE
   CKO_02248 2085327 .. 2085340 -  -2.4  -2.96216   GGCGAGGATTATACA               CGTT ATTGCA AACG                GAAGAACCGCCTGCT  42 14
        rumB 2084089 .. 2084106 -  -3.5  -3.03771   TCACAGGGGGGAAGA             GTTC-ACA TTT TGTTGAAC             TTTGTGCGGACGTTG  45 77
   CKO_02246 NONE
   CKO_02245 2081753 .. 2081778 -  -3.9  -4.56597   GCGCTGCTGGAAAAA         CTGAACACCGC GCTG GCGGCAATCAA          AGCTGATGGCACTTA  69 112
   CKO_02244 2080947 .. 2080973 -  -9.5  -4.18351   AAACGAAATCATAAA        GACGGACAAGCC ACTA AGC-TGTCCGTC         TTTTTTTATAACAAC  83 12
   CKO_02237 NONE
   CKO_02236 2075729 .. 2075739 -    -4  -3.69605   TTTATCCAAAATGAA                 TTTC GAT GAAA                 ATAAACAAGTTAACT  56 66
   CKO_02235 2074489 .. 2074501 -  -4.7  -4.29656   GACAAAAGTGGAAAA                CCCGG ATA CCCGG                CTTTCTGAGATGCAC  66 388
   CKO_02231 2072451 .. 2072464 -  -3.1  -2.80796   CCTCATTATTTAAAT               GCCTT TAAT AAAGC                TAAATTTTGCAGCAC  42 2
   CKO_02229 NONE
   CKO_02228 NONE
   CKO_02227 NONE
   CKO_02226 NONE
   CKO_02225 NONE
   CKO_02224 NONE
   CKO_02223 NONE
   CKO_02222 NONE
   CKO_02221 NONE
   CKO_02220 NONE
   CKO_02219 2062392 .. 2062407 -  -3.3  -3.90744   GCTTTCCCGAAACAA              CATGA TCGTAT TCATG               CGTTTTTATTCCAGC  56 21
   CKO_02218 2061461 .. 2061477 -  -2.3  -4.92783   AACCCATTATAAAAA              TGAAATA ATC TATTTCG              CTTTACGCTCCTCCC  70 157
   CKO_02217 2058565 .. 2058590 - -12.5   -2.8805   ATTATTTTTTAGAGA         TGGCCGCCCCC AGAC AGGGGCGGCTA          CCCTTCGCGGATAGA  79 71
   CKO_02216 2057953 .. 2057979 -  -3.1  -3.78597   AGTGATTAATTCAAA        TTCTGCGTTGTC CATT AACAACAC-GAA         TAAACAAACATCAGA  52 105
   CKO_02215 2055967 .. 2055986 - -13.6  -5.48063   AGTGAACACAAAAAA            CGGCAACC ATCA GGTTGCCG             TCAGATTGTTATTGT 100 132
   CKO_02210 NONE
   CKO_02208 2049856 .. 2049882 -   -13  -3.06696   TTTCCGGTGAATATA         CGGTCAGCAGCA CCA TGACGCTGACCG         ATGCGGAAATCGCCG  81 186
   CKO_02203 2043385 .. 2043404 -  -4.2   -4.7889   ACAAACACTGAAAAA            CG-CGCCGA ATA TCGCCGTCG            CTATCCATTGCTGGG  73 77
   CKO_02202 2042188 .. 2042203 -  -3.2  -2.61274   CTCAGCTCAAGCAAT              GCCGTCA TTG CG-CGGC              TCCAGGTTTGCTCTC  41 14
   CKO_02201 2040149 .. 2040169 - -12.6  -4.18197   ATCCCGCAGTCAAAA            TGCCAGCC CGATC GGCTGGCA            TTTTTATTTCTGCGC  95 105
        clpS NONE
        clpA 2036860 .. 2036885 - -12.7  -5.75342   TGGCGGCAAAAAAAA         TCCGTAACCTC AAAA GAGATTACGGA          TTTTAGCGAGTTTAT 100 80
   CKO_02197 2036216 .. 2036239 -  -5.2  -4.45083   GCCATATTCAGAAAA          GAGCTCGTAC GAAA GTACGGGCTT           TTTTTTCGCATGTTG  70 127
   CKO_02192 NONE
   CKO_02191 2033039 .. 2033053 -  -7.1  -3.19789   ACATTCAATACTGAA               CTGCC TGTAC GGCAG               TGAACGAAACGCTAC  59 187
   CKO_02190 NONE
   CKO_02189 2032599 .. 2032616 -  -2.8  -3.63968   TTTTAAACGCGCAAA             TCTTTA CTTATT TAAAGA              ACTTCGGCATTATCT  49 209
   CKO_02182 2025936 .. 2025972 - -11.6  -4.13767   TGCCCGATGCTAAAA   CGGACAACAGCACCGGG TTGC CCCGGCACTGTTG-CTG    TATGGATTAACAGGA  95 79
   CKO_02181 2021873 .. 2021894 -  -4.3  -2.78508   TATTCCTCAAAATAC           GTCACTCCC GATG GGGAGTTCC            CTCTGCTCTCTATTC  46 108
        lolA 2021214 .. 2021235 -  -2.3  -3.55254   TATTATCAGAAAAAT           CGAGCGA-CA GAT TGCTCACTCA           TGCGCCTCTACTTAC  47 33
   CKO_02179 2019832 .. 2019854 -    -7  -4.10188   AATTAAAATAGGAAA           CGTGACCACA GCC TGCAGTCACA           GGGATACAGTGCCAA  71 60
   CKO_02178 2018467 .. 2018480 -  -9.5  -5.96219   CAGGCATAAAAAAAA               GCGCC CGGA GGCGC                TTTTTAAGCAGAGAG 100 50
   CKO_02177 2015640 .. 2015651 -  -4.4  -2.56391   AGTAGGCAAAGACAT                TCTG GTGC CAGA                 CGCCGTTATCCTCCT  44 193
   CKO_02175 NONE
   CKO_02174 2014296 .. 2014308 -  -6.2  -3.30124   CCGTAGGCCTGATAA                GGCG CGAAC CGCC                ATCCGGCATATTATG  59 43
   CKO_02171 2012145 .. 2012162 -  -3.3  -4.18644   ATCACATAAATTAAA             CGTGCGCC ACA GGCGT-CG             GCGTATGTCCTGCGT  59 3
   CKO_02165 2004232 .. 2004252 - -12.6  -5.48623   AAACAGAAATAAAAA            CCCCACAG GCTGG CTGTGGGG            ATGAAAAAAGAAAAC 100 44
   CKO_02164 2002869 .. 2002893 -  -9.2  -2.90194   ATTTGCGCAATTATA          GCGGGCTGGC GAAGA GCCAGCCCAA          AAGATGACAATGTTT  65 49
         cmk 2002005 .. 2002029 -  -7.2  -2.87132   GGGTTGTTTCACATA         CCCACTGTCAA TCCA TTG-CAGCGGG          GGTACTACAAATTCG  56 48
        rpsA 2000162 .. 2000179 - -14.1  -3.18264   TGTTGCATTGATTAA             GGGCGGC CGTA GCCGCCC              TTAGTGCTTGATTAC  86 111
        ihfB 1999808 .. 1999822 -  -2.9  -3.14132   TTTTTTCTGGATCAA               GTTTT TCGTT AAAAC               TTAACCGTAAATATT  45 26
   CKO_02159 1999336 .. 1999359 -  -4.6  -2.88544   TGTTATTTTCATAGA          CAC-CTCCCTG TTA CAAGAAGTGTG          CAGATTTGGCTAACG  46 63
   CKO_02157 NONE
   CKO_02156 1995296 .. 1995308 -  -6.3  -2.73441   GATCATTGGCCAAAT                TGCAT TTT ATGCA                GTTGCGAATACACAC  53 0
        lpxK NONE
   CKO_02154 1993024 .. 1993037 -  -3.9  -3.39717   ATCCATCAATATTAA               CATAA TCGT TTATG                AGACCGCGTCTATTT  49 21
   CKO_02153 NONE
   CKO_02152 NONE
   CKO_02151 NONE
   CKO_02150 1990693 .. 1990715 -  -7.6  -3.33315   GCAAGAGTGGCACAA           TCGCTGGGTG TGC CGCGCAGCGA           CATCATCACGCTGGA  64 318
   CKO_02147 NONE
   CKO_02146 NONE
   CKO_02145 NONE
        mukB 1982829 .. 1982846 -  -8.4   -5.1861   TTTATGATGAAAAAA             GACGGC GCGAAG GCCGTC              TTCATCTTACTTACC 100 36
   CKO_02143 1980649 .. 1980679 -  -6.8  -3.15544   GCCCATCCCCAGCAA       CGGCGGGGCT TGCAGCGAATC AGCCCTGCCG       ATGACCAATATTACG  59 68
   CKO_02142 NONE
   CKO_02141 1979252 .. 1979272 -   -14  -2.86343   ACTGTAAGTATCATA            GCGCCAGG TAGTG CCTGGCGC            TTACCCGGTCTACAG  84 70
   CKO_02140 1977901 .. 1977916 -    -9  -5.07107   TAAATGCCTAAAAAA              CAGGAC TTCG GTCCTG               TTTTTTTATGTCTGC 100 2
   CKO_02138 1976568 .. 1976578 -  -2.6   -4.6526   ACAAAGCGCCAAAAA                 TAAA ACA TTTA                 GTTACACATTTTTTC  65 162
   CKO_02133 NONE
   CKO_02132 NONE
   CKO_02131 1971602 .. 1971628 -  -2.1  -4.11216   GCGTCACGTTTAAAA         TCACGGAGGCC GTTCA GGCGCCCGCCA         GCCAAATGAAAACGT  55 71
   CKO_02130 NONE
        pepN 1968421 .. 1968435 -  -7.1  -3.85698   TCCGGCGGGCAGAAA               CAGCG TGTCG CGCTG               GCCCGCGCGCTGATC  65 437
   CKO_02123 1963218 .. 1963247 - -11.5  -4.73864   TGAAGGAATATAAAA       CAACCAGGGCC GGAAATAA AGCCCTGGTTG        TCTGATAATGAGAGA 100 47
   CKO_02122 1962107 .. 1962119 -  -9.1  -4.72486   GAGAAAGGGCAAAAA                CACCC AAC GGGTG                AGCCGCTGGCAACCT  93 462
        rlmL NONE
   CKO_02119 1957225 .. 1957236 -  -4.4  -2.56122   TGCGAGCATAAAATG                TGCT TCGC AGCA                 TGATGATGTTCGCAC  44 57
   CKO_02118 NONE
   CKO_02117 NONE
   CKO_02116 1953746 .. 1953772 - -11.5  -6.23317   AGAAAAACAAAAAAA         CCGCCCCCGGC GACGT GCCGAAAGCGG         TTAAATTTACAATAT 100 48
   CKO_02112 1950188 .. 1950202 - -12.8   -5.4505   CCGTCTAATAAAAAA               CCCCGC GCT GCGGGG               TTTTTTTCGTCTGAA 100 66
   CKO_02109 1947260 .. 1947289 -  -4.3  -3.21099   GCGCTTCACCATCAA       CCCGCCGATGAACA GCG CGTTCACCAG-GAG       CTGGCAAGCCTGAAA  49 153
   CKO_02106 NONE
        helD 1942250 .. 1942270 -  -7.6  -2.75307   AACAGATGTTAATGA           GCTGGGTGG AACG CCACC-AGC            CGCTGCTGGAAAAGC  55 413
   CKO_02103 1941504 .. 1941551 - -11.4  -5.07567   TTAGACGGCAAAAAA GTC-TCCAGTTCATTGCTGCGCG GCG CGGACAGCATCGAACTGGACAAC GGCCCGCATCAGCTT 100 424
   CKO_02101 1940755 .. 1940782 - -10.6  -4.28774   TGATTCAACGTAAAA        TGCCCGAT-AGCG CGA CGCTTATCGGGCT        TACACGCTATGTCTG  90 46
   CKO_02098 1938709 .. 1938740 -  -5.8  -5.06414   TTTGGCGAAGAAAAA      GGCAACAGCCGCTA CCTG TATCGCCTGTTTCC       GAAAGGCCCGGCAAA  84 86
   CKO_02095 1937230 .. 1937259 - -17.3  -4.96848   TTTTTGACACAAAAA       CAAAGGGGCTACC TTTC GGTAACCCCTTTG        TTTAATCTGGCGGAA 100 240
   CKO_02092 NONE
   CKO_02091 NONE
   CKO_02090 NONE
   CKO_02089 1930678 .. 1930712 -  -4.4  -4.15788   AACGGGCGCAATAAA    CAACATGGCGACGGCA AATAA TGCCA--GCCATGCTG    TTATTCGGTTGATTC  61 182
   CKO_02088 1930249 .. 1930275 -  -7.2  -2.72344   TTTCAGGCGCAACGA         CGCATTGCCCGT CAA AAGGGCAAAACG         CTACGCAATGTCTGT  55 53
   CKO_02087 1928131 .. 1928155 - -12.8   -2.5194   CAATGAGTCATGAAG          TCGGCGGACG GTTCA CGTCCGCCGG          AAGGCTATCAAAACG  78 33
   CKO_02085 1927346 .. 1927383 -  -5.5  -2.76696   TTTCTTGTTAACAAG   CCAGCAGACAACATGAC AAAG GTCCGGTTGCATACTGG    GAAAATGACCAGGCC  50 62
   CKO_02084 1925833 .. 1925851 -  -5.8  -3.60627   GCAGCGTACCGGAAA             CGCTACGC ATG GCGGGGCG             CAACTACGGCCTCAG  58 394
   CKO_02080 NONE
   CKO_02079 NONE
   CKO_02077 NONE
   CKO_02076 1920196 .. 1920209 -  -2.5   -3.5594   AATTTATCCTTTAAA               TAATA ACGT TATTA                ATGCCATGCTTCGCG  47 23
   CKO_02075 1919164 .. 1919178 -  -2.8  -3.32963   ATGGCGATGTGATAA               CTCAAT CTC ATTGCG               CTGCTACCGCCGCGT  47 18
   CKO_02074 NONE
   CKO_02073 1917427 .. 1917469 -    -7   -4.4009   CGCGAGGCGATAAAA CCGTTATGGCGACAGGCCG CGCTCT CGGGC-GTCGCCATGACAA TATTGATACTCGGGA  77 184
   CKO_02072 1916421 .. 1916434 -  -2.3  -4.18042   CCGATATAAATCAAA               TCCTG CCCC CGGGA                ACCGCCGTAGCATAG  55 7
   CKO_02070 1915898 .. 1915911 -  -5.2  -3.35813   TTTGAGGGCAATTAA               GCCG CTGACT CGGC                TTAACCTTGTACAAA  54 68
   CKO_02069 NONE
   CKO_02068 1915322 .. 1915334 -  -6.9  -3.25538   GCTGGAAGAAAATGA                CCGGC TAC GCCAG                GAAAACCGCTTGCTG  56 63
   CKO_02064 1913577 .. 1913590 -  -6.7  -3.07816   CTGTCATTCACGGAA               TACGC AGAA GCGTA                GATGGACTCTGAGTG  55 0
   CKO_02063 NONE
   CKO_02062 NONE
   CKO_02061 NONE
   CKO_02060 1910491 .. 1910508 - -12.7  -5.03145   CAATGGGTTAAAAAA             TGCCGGG TTTC CCCGGCA              CGCTATCAAAACATG 100 31
   CKO_02059 1909444 .. 1909485 - -13.8    -4.329   TAACAGAGGAATAAA TCCCCCTGCCGACAGTGA TGTTAT TCATTGTCGGCAGGCAGA  AATAAAACGCGTTAT 100 56
   CKO_02057 NONE
   CKO_02056 1906655 .. 1906710 - -18.3  -2.62983   GCGACGGGCATATGA TCGGTCTGACCAACGCGCCAGAAGG GGGAAT CCTCCTGGCGCGTTGGTTAGTCGGT TTTAGTTCAGACCGA 100 27
   CKO_02055 NONE
   CKO_02054 NONE
   CKO_02053 NONE
   CKO_02052 NONE
   CKO_02051 NONE
   CKO_02050 1901099 .. 1901111 -  -3.3  -4.08064   AACGGTTTCGCAAAA                CGGGA GAT TCCAG                AAGATAACCGGCAGG  59 55
   CKO_02049 1899584 .. 1899595 -  -2.2  -4.01184   ATACATCACCAGAAA                TAGC CGAA GCCA                 TTTTTGAAGTCGCGA  54 208
   CKO_02046 1898259 .. 1898277 - -13.1  -5.64274   TTACGGACAAAAAAA             CCGCCGG AGGAA CCGGCGG             CGGTGGCATCATAAC 100 86
   CKO_02045 1897008 .. 1897034 - -11.6  -3.04894   AAGGCTTTGGAAAAT        GCCCGGTG-GC GCTACG GCTCACCGGGC         CTACAAAACACATTT  78 489
   CKO_02043 NONE
   CKO_02041 1891041 .. 1891057 - -10.8  -5.08088   AATTCTGAATAAAAA              GCCCGC GCATG GCGGGC              GATGAAAGTAAACGG 100 53
   CKO_02040 1889695 .. 1889718 - -12.4  -5.24129   CCGGCCTACAAAAAA          CAAAGCCCGG TTTC CCGGGCTATG           AGATCTGACGACGCT 100 41
   CKO_02039 1889042 .. 1889052 -  -4.6  -5.40474   ATGCTGGCAAAAAAA                 GCAG TTT CCGC                 TTATTTAAACTGCAT  90 486
   CKO_02036 1887980 .. 1887995 -  -8.2  -3.62275   ATTTATTAGTCGAAA              CCCGGC GCTA ACCGGG               TTGTCATCAGTAGCC  69 32
   CKO_02035 NONE
   CKO_02034 1886584 .. 1886597 -  -6.7  -4.30987   ACGTTGCACAACAAA               GTGAC AACG GTCAC                ATTTACTCTTCAGCG  72 28
   CKO_02033 1885919 .. 1885977 - -20.4  -2.61681   CGCCAACCGTAGAAT GCCCGATGGCGCAGACTTATCGGGCCTA CAA CAGGCAGGATAAGTTTGCGCCATCAGGA TTGACATCATATGAG 100 64
   CKO_02028 1882906 .. 1882917 -  -2.2  -3.97051   AAACATTTTAAATAA                CTCA CCCG CGAG                 TGGTATTTTGATATT  54 185
   CKO_02026 1882325 .. 1882336 -  -4.4  -3.16564   TCGTCATGGTATTAA                CGTT GCGT AACG                 CGAATAGCCATGCGC  49 10
   CKO_02025 1881785 .. 1881800 - -10.4  -5.86061   CCTCACGAAAAAAAA              CAGGGC TTTC GCCCTG               TTTATTATGAGTACC 100 50
        csgC 1881312 .. 1881359 -  -2.6  -2.74741   ATCATACTTGAAGGA TCGGAGTTTTCCTTCCACTGCGA CGC TCGCGGTGAACGG-AAACGACGT TGTTGCCTCTCTATA  41 98
   CKO_02023 NONE
   CKO_02022 NONE
   CKO_02021 1878858 .. 1878868 -  -6.8  -3.39668   GGTTAAACGTGATAA                 CAGC AAG GCTG                 TCGCCAGTTAAGCTG  61 55
        mdoG NONE
   CKO_02018 1873305 .. 1873323 - -10.3  -5.67063   TTCAGTATAAAAAAA             TACCGGC AGCAG GCCGGTA             TTTTCAGATAATTGT 100 93
   CKO_02017 1872942 .. 1872956 -  -5.7  -3.65812   GTGGCTGGAAGAGAA               CACTC TGCAT GAGTG               GGATGACGGTGAATT  60 108
   CKO_02015 1870951 .. 1870967 -  -3.6  -3.17212   CCACCACGTCAGGAA              CCTGGA TGCTC TCCCGG              ATGTCCAACGCCTGT  47 335
   CKO_02011 1868974 .. 1869002 - -13.8  -3.17075   GGCCCGGTAAGCGAA        GCGCCACCGGGC GTAAT GCCGGATGGCGC        TACGTTATTCCGCCG  86 30
   CKO_02009 1867511 .. 1867529 -  -3.2  -4.10612   ACGCACAATGACAAA             TTCAATCA ATT TTATTGAA             ATAAAAACAAATATC  56 8
   CKO_02004 1865243 .. 1865266 -  -4.6  -3.67597   TGCCGCAGCCAACAA          TTTGTCG-GTC ATT GGCGCGACAAA          AGAGGATAAAGAACG  55 150
   CKO_01998 1861107 .. 1861126 -  -3.6  -3.34962   GCCGACACCGCAGAA            TAGAAGGT GCTC ACCTTTTA             AACTCAACAGAATTC  49 16
   CKO_01996 NONE
   CKO_01995 NONE
   CKO_01994 NONE
   CKO_01993 NONE
   CKO_01992 1856781 .. 1856801 -  -5.3  -3.59262   CTCGACATGCTGAAA            CCGCATCAG GAA CCGACGCTG            TATGGCGCGAACGGT  56 188
        flgB NONE
        flgC NONE
        flgD NONE
        flgE NONE
        flgF NONE
        flgG 1850856 .. 1850895 - -10.9  -4.11216   CCTTCATCTTCAAAA TCAGTGT-G-CCGGTGAGG TTTC CCTCACCGGACGACACTTA  GAGTTGCGTCAGTTT  89 23
        flgH NONE
        flgI NONE
        flgJ NONE
        flgK 1846389 .. 1846402 -  -2.3  -3.05384   CTCTCCCTTAGCGAA               TGCCC AACA GCGCA                TCAAACAGCGTATTC  42 4
        flgL 1845341 .. 1845369 - -13.2  -5.40072   TTCCGGGCAAAAAAA        TGCCCGCTCC GGGGTGAAG GGAGCGGGCA        GACAAAACATACCCA 100 68
   CKO_01974 1840398 .. 1840408 -  -2.4  -3.22475   TTTAGCGCGATAATA                 TCGC AAC GCGC                 ATCAGGCTTTGTTAC  43 27
   CKO_01973 1840063 .. 1840084 -  -7.3  -3.76952   GCCATTTAAGCGAAA           CGGAAATAG AGGA CTATGTCCG            CAAAGAGCGTCCATT  68 213
   CKO_01969 1838725 .. 1838770 -  -4.2  -3.54424   GCTTACGCGGGGAAA TCCTCACTAAGCTTCATCACGC TTGC GCGTGATTA--CTTAGCGATGA CCTTACGGCCGCGGT  53 202
   CKO_01968 NONE
   CKO_01967 1836582 .. 1836592 -  -2.4  -2.92669   ACTAGAAACGAACCA                 GCGC GGA GCCC                 CAGGTGAATCCACCC  40 1
   CKO_01966 NONE
        fabG 1834747 .. 1834760 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  58 141
        acpP 1834453 .. 1834479 - -13.1  -5.02287   GACAAAAAGATAAAA        CT-CAGGCGGTC GAAT GACCGCCTGGAG         ATGTTCACTTACGCC 100 34
   CKO_01963 1833121 .. 1833137 -  -7.2   -5.4756   AAGCTGAATAAAAAA              GGCCCG ACAAG CGGACC              TTTTTACTCTCTGGT  91 49
   CKO_01962 NONE
   CKO_01961 NONE
         tmk NONE
   CKO_01959 NONE
   CKO_01958 1828655 .. 1828687 -  -3.5   -3.1919   ACAGCCATAAAACCA      TCACATTCTGACA AAATGAG TGTCTGAATGTTA      CAATTCGCTCATTCA  47 108
   CKO_01957 NONE
   CKO_01956 1826747 .. 1826764 - -12.7   -3.4252   CGTCACTGACGAGAA             GGGAGCC ATCT GGCTCCC              TTTTTTACGTTCTCG  85 56
   CKO_01953 NONE
   CKO_01952 NONE
   CKO_01951 1822752 .. 1822773 - -12.3  -2.71483   ATATTGCGGGAAGTA           GCGCGACAA AACG TCGTCGCGC            GTCAGTAGATTATTG  78 35
        thiK NONE
   CKO_01949 NONE
   CKO_01948 1820329 .. 1820344 - -10.4  -5.61596   ATGCTCATAAAAAAA              CCAGCC CGAA GGCTGG               TTTCTGAGGGGGGTG 100 57
   CKO_01947 1820148 .. 1820162 -  -2.9  -2.64155   CCCCCCTTAAATTTA               TTAAC CAATT GTTAA               GTAAAAGTTATAAAT  41 11
   CKO_01946 1818696 .. 1818711 -  -6.2  -2.78672   GGCAAACAGACACGA              TTCAGA GAAC TCTGAA               GCAGATGGCGCGATT  50 137
   CKO_01944 1817998 .. 1818024 - -10.1  -5.60993   CGTCTGATAAAAAAA         GCCCCTCAGCC TGAGC GAATGAGGGGC         TAACGTGCAGAGTAC 100 49
   CKO_01942 1816779 .. 1816799 -   -14  -5.55769   TCGGATAATAAAAAA            GCCCCGCT CAGAC AGCGGGGC            TTTTTTGTGGCAGTA 100 67
   CKO_01940 NONE
   CKO_01939 NONE
   CKO_01938 1815170 .. 1815186 -  -4.4  -4.77757   TGCGAAAAACGAAAA              CGAGCT GGAGG AGCTCA              AGGTAGAGCTGATCG  74 311
   CKO_01935 NONE
        lolD 1808688 .. 1808704 -  -5.1  -2.96249   GCCGATCAATAACGA              TAAAGGC GAA GCCATTA              CTCAGCTCCCATCAG  50 23
   CKO_01933 NONE
   CKO_01932 1806468 .. 1806484 -  -2.2  -3.14848   TGTTTTTACGAAAAC              GGCTTA ATCGA TGAGCC              CGACGCGACTGCATA  43 55
   CKO_01931 1805594 .. 1805619 -  -9.7  -2.94411   AGCGTTGTAAAGAAT         GCCCGAT-GGCG CTG CGCTTATCGGGC         CTGGATAAATGCAAA  70 83
   CKO_01926 1800274 .. 1800293 -  -2.1  -2.67992   TACACCACGACACCA            TTACTGC TGCTTC GCAGTTA             GCTCCGCAATACGCA  39 6
   CKO_01924 1799065 .. 1799075 -  -2.6  -3.39187   AACATGGAATATCAA                 TTAA CAC TTAA                 CTGGCCCGAATTTCT  47 72
   CKO_01920 1794911 .. 1794934 - -13.8  -2.52543   ACGTGGGCTAAGGGA          GGCGGGAGGG CGGC CCCTCCCGTC           ACAGGGGGTTATATG  83 214
   CKO_01914 1790120 .. 1790135 -  -3.2  -3.46602   CGGTGTATATGACAA              CCAGCA GGAA TGCCAG               GCCGCAGCTGTCGAG  49 78
   CKO_01912 1789603 .. 1789626 -  -5.3  -3.77196   GCAGCAGGTATCAAA          CGTT-CCGCC AGCCG GGCGACAACG          GCAAGCAGAGGGTGA  61 269
   CKO_01908 1788784 .. 1788801 -  -9.8  -3.61468   GCGGAATGAAATTAA             CCCGGC CACCGC GCCGGG              TTTTTATTGCCCTTT  75 385
   CKO_01904 1786483 .. 1786503 -  -2.5  -3.14132   GTGCTTTTCTATGAA            CTCCAAATG ATT CATCTGGTA            ACCTCACATGACACC  43 29
   CKO_01903 1786207 .. 1786233 -  -4.4  -3.16267   TGGAATTACACCGAA        GGCCGTCTGTG TTGGCG CACAG-CGGTC         TTCACCCTTTCAGAA  49 35
   CKO_01902 NONE
   CKO_01901 NONE
   CKO_01900 NONE
   CKO_01899 NONE
   CKO_01898 NONE
   CKO_01896 1781794 .. 1781816 -  -7.8  -4.58395   GTTACTTGGCAAAAA           GTGGTTTTAT CTA AAAAAACCAC           TTCATAGATGCCATT  82 39
   CKO_01893 NONE
   CKO_01892 1779197 .. 1779225 -    -6  -2.60714   TTAAATGCGCAGAAG        CCGCAATCGG GTGTTCAGT CCGACTGCGA        TTTAATTATTGCTGG  49 319
   CKO_01891 NONE
   CKO_01890 1778727 .. 1778745 -  -4.4  -2.76422   TATTCTGAAAAAATG             CGCGCCAG CCC CAAGCGCA             ATGTTAGTAAAACCA  46 29
   CKO_01888 NONE
   CKO_01887 NONE
   CKO_01886 NONE
   CKO_01885 NONE
   CKO_01884 NONE
   CKO_01882 NONE
   CKO_01881 NONE
   CKO_01880 1775620 .. 1775639 -  -8.5  -4.17701   TCCAGAAACGACAAA            GCCCCGC ACGATG GCGAGGC             TTTAAGTTCGTCGAC  77 89
   CKO_01879 1775195 .. 1775209 -  -9.2  -5.72622   GGCACAAATAAAAAA               CCCGCC AGA AGCGGG               AATAGAAGATAAGCG 100 94
   CKO_01877 NONE
   CKO_01876 NONE
   CKO_01875 1773713 .. 1773729 -  -2.2  -3.21726   CGCCAGAAGACTTAA              TCTGCA CTATT TGCGGA              ACTCCTGTTGTTTGA  43 5
   CKO_01874 1773219 .. 1773232 -  -9.5  -5.46657   GATGCCAACAAAAAA               CCGCC CGGA GGCGG                CTATTTTATTTTTTA 100 31
   CKO_01873 NONE
   CKO_01871 NONE
   CKO_01870 NONE
   CKO_01869 NONE
   CKO_01868 NONE
   CKO_01867 NONE
   CKO_01866 1767450 .. 1767465 -  -8.2  -5.60689   TCAGATAATAAAAAA              GGCCGC CTTA GCGACC               TTTCTTTTTGTATTC 100 17
   CKO_01865 NONE
   CKO_01864 1765322 .. 1765335 -  -9.5  -4.54727   CCCTCCAAAGGAAAA               GGGGC CGAA GCCCC                TTGTGTGTGATGGTG  90 41
   CKO_01863 NONE
   CKO_01862 NONE
   CKO_01861 NONE
   CKO_01860 NONE
   CKO_01859 NONE
   CKO_01858 NONE
   CKO_01857 1762831 .. 1762844 -  -8.1  -3.19192   CTCCATCGAAGTTAA               GCGCT ACAG AGCGC                GGTAAGGGATTTGTA  65 15
   CKO_01856 1761607 .. 1761636 - -10.6  -5.14563   TCCTGCATGAAAAAA       GCCCGCGCCGCC ATGCAG AGCGGAACGGGC        AAGGGAAATTTTATG 100 36
   CKO_01855 NONE
   CKO_01854 NONE
   CKO_01853 NONE
   CKO_01851 NONE
   CKO_01850 NONE
   CKO_01849 NONE
   CKO_01848 NONE
   CKO_01847 1753056 .. 1753073 - -12.7  -4.94487   TCATAAAATAGAAAA             CCCGCGA TTAT TCGCGGG              TTCTGAATGTTATCT 100 51
   CKO_01846 1750967 .. 1750993 - -15.9  -2.93712   AAGAAAATCATGATA         GAAGGGGCCGC ATAAA ACGGCCCCTTC         TTATTAAACTATATT  93 29
   CKO_01842 NONE
        umuC 1745889 .. 1745899 -    -4  -4.21073   TGAAAAAAATAAACA                 GTTT GAG AAAC                 ATGCATTTATAACAA  64 231
   CKO_01835 1739926 .. 1739945 - -11.4  -5.95946   CTAATAATAAAAAAA            CGGGAACC CTTT GGCTCCCG             TTCTTGTTTAACCCA 100 50
   CKO_01833 1738272 .. 1738285 -  -9.5  -3.22476   ATTATTGACCAGTAA               CCGCC CGGA GGCGG                TTTGAAACCAGGAAA  71 45
   CKO_01832 1738005 .. 1738024 -  -9.3  -5.61596   ACTGGCATAAAAAAA            CGGGAAC TGACAG GTTCCCG             TTCTTGTTTATCCTC 100 51
   CKO_01829 NONE
   CKO_01828 1732814 .. 1732833 - -10.7  -5.39755   GAGAAGCATAAAAAA            CGGGAGC ACACAG GCTCCCG             CTTATTCCAACAAAC 100 56
   CKO_01827 1732040 .. 1732063 - -13.8  -2.80074   GCCGTCACAACACGA          TGGCGGGTCC TGCC GGGCCCGCCA           TAATAACAACATCTT  84 39
   CKO_01825 1731200 .. 1731220 -  -8.2  -3.06302   ATCATCTTTACGGAA            GGCCCACA GAGTG CGCGGGCC            TGATGGCGTTATGAC  63 34
   CKO_01824 NONE
   CKO_01823 1730432 .. 1730460 -  -8.8  -6.09133   CAGGCGAAAAAAAAA        CCGCCCAGCG TCGTGATAG CGCTGTGCGG        TTTAGCGTAACGGTT 100 74
   CKO_01822 1729378 .. 1729396 -    -6  -2.62933   GAACGGTCTATATGA             CCTATCAA TGG TGGATAGG             CGCCTGTAACGAACT  49 258
   CKO_01820 NONE
   CKO_01818 1726662 .. 1726678 - -10.1  -4.70107   TATCAAAATAATAAA              GGCCACC AAC GGTAGCC              TTTTCGTCTTACGAA  93 50
   CKO_01817 1725877 .. 1725903 - -11.5  -3.79445   AAGCAGGAAGGTAAA         CGGCTGGCGGA TATTG CCCGCCAGCAG         ACGCTGACCCTGCTA  82 162
   CKO_01814 1724227 .. 1724257 -  -9.7  -3.12668   CACGGCTACAGTGAA      GC-GCAGGCCGGAT CGCT ACACGGCCTGCTGC       AACTGGCGACGGCTG  67 480
   CKO_01812 1722108 .. 1722146 -  -2.5  -5.28176   GTTATTGATAAAAAA  GCCTGTTCACT-CACG TATTTGCG CGTACAGTAAGCAGGC   TTATCTTTCTCTGGC  76 483
   CKO_01808 1718852 .. 1718870 - -13.2   -4.7373   TCAGGTCAGTAAAAA             GCCAGAAC CCT GTTCTGGC             TTTTCTTTATTTCCC 100 32
   CKO_01805 NONE
   CKO_01804 1714165 .. 1714194 - -15.1  -3.62275   ATGCACCACCGCAAA       GCAAAACAGGGCG CAAG CGCCCTGTTTTGA        TGCACGAATTGCACT 100 55
   CKO_01803 1713995 .. 1714007 -  -4.1  -3.90744   GCCTGGTGCAAACAA                TTCGC GTC GCAAA                ACGTTAAGGCTTGAC  58 29
   CKO_01799 1711260 .. 1711273 -  -2.3  -2.66042   AAGATTCATGATAAG               TCCGC TCCT GTGGA                ATAATTTGCTGAATC  39 47
   CKO_01798 1710539 .. 1710549 -  -4.6  -3.35679   CCTGCTCAGGCAGAA                 CGCC ATC GACG                 CGGTTTTCCATAAAG  51 454
   CKO_01795 1708715 .. 1708746 - -10.9  -2.73994   ATGCGCGTAAGAGCA      CCCCGGCGCAGATT GATAA AATC-GCGCAGGGG      CATGTCTGGACCGGT  73 300
   CKO_01792 1706444 .. 1706475 - -11.6  -2.76696   GTTTTGCCGAATAAT      CGGCAGGCG-CTCAT CGA AAAAGCCGCCTGCCG      GGGCCATGACGCTTA  77 38
   CKO_01791 NONE
   CKO_01790 1703279 .. 1703313 - -10.6  -2.57931   TGTAGGCCTGATAAG     CGCAGCGCCATCAGGC ATT GCCGGATGACGGCGCA     AGTGCCTTATCAGGC  70 48
   CKO_01788 1701328 .. 1701351 -  -5.9  -3.63744   GTGTTCGCCAAAAGA          GGCGC-TGCG TTACC CGCTTGCGCC          TGCGGACATTCCGCT  60 52
   CKO_01787 1700797 .. 1700836 -  -7.2  -4.28188   CAGCCAGAACAGAAA CGGCATTC-GC-CCCCAC CAGCGC GTGGGGTGCAGAACGTCG  CCGTAATGTTTTTTC  74 89
   CKO_01785 NONE
   CKO_01784 1699596 .. 1699611 -  -4.6  -4.62783   CAGCGATCCGAAAAA              TCCGGT GTCC ACCGGC               GAGCGCGACCCGGAC  71 142
   CKO_01776 1693120 .. 1693141 -  -4.3  -4.98531   TTTGGAAACGAAAAA           TCAACGGGT TACA ACCCGCCGG            TATTCACTATTGCTG  80 4
   CKO_01774 NONE
   CKO_01773 NONE
   CKO_01772 NONE
   CKO_01771 NONE
   CKO_01770 1686929 .. 1686954 -  -7.5  -4.59846   AGCACACAAAAATAA         GCCCCTCAGAC GTTC GCCTGAGGGAG          AAAATAATTATGCGA  82 33
   CKO_01769 NONE
   CKO_01768 1686069 .. 1686118 -   -18  -5.64321   AGAAGAAAAGAAAAA CCGCCGATCCTGTCCACATC GAGAAGAGAT GTTGTGAACAGGACCGGCGG TCTTGAATGCGTTAG 100 56
   CKO_01767 1685048 .. 1685062 -  -7.8  -4.27584   ATCTGGAAGGGAAAA               CGCTGG ATG CCAGCA               TCGCGAAAATCATCG  77 364
   CKO_01764 1683707 .. 1683722 -  -7.5  -5.84381   CCAGGAACAAAAAAA              CCGGC ACACAG GCCGG               TTCATACATATGCTC 100 57
   CKO_01763 1683066 .. 1683084 - -11.8  -3.38603   AAATACCCTTAAATA             CCGCAATA AAA TATTGCGG             TGAATGTTTATGAAA  82 74
   CKO_01762 NONE
   CKO_01761 NONE
   CKO_01760 NONE
   CKO_01759 NONE
   CKO_01758 1678155 .. 1678176 - -15.9  -5.26316   TGACGGCATAAAAAA           TGCGGCGCA GCAA TGCGCCGCA            AACTCAGGAGTCAGA 100 36
   CKO_01757 NONE
   CKO_01756 1677716 .. 1677732 -  -9.4  -4.24342   CGCGTGATGAACAAA              CCGCCT TAATC AGGCGG              TTTTTTTATGCGAAT  83 40
   CKO_01751 1673184 .. 1673211 - -10.6  -2.92371   ATGCACTGAACCACA        GGCCCGATAAGCG AAG CGCT-ATCGGGCA        TTCTTCATTGCTACA  72 36
   CKO_01747 1669770 .. 1669796 -   -13  -4.74504   ACGCTAATTTAAAAA         GCCGGGTCGTGT TTA AAACAACCCGGC         AGGCGATTACATCTT 100 32
   CKO_01746 1669310 .. 1669346 -  -2.8  -3.54424   CTTCACTCTGCGAAA    TATGTCACGGCCCGCC TGAAT GGCGAGACTGGACCTA    CACCCGTTTTTTGAT  49 23
   CKO_01745 NONE
        infC 1666683 .. 1666708 -  -9.7  -4.65916   CCCAGGCGAACAAAA         TCTGTGAAGCC CGAA GGCTCCACAGG          AATTGCTACTTGAAG  93 44
        rplT 1665926 .. 1665948 -   -12  -5.02323   GCACTACAAATAAAA           GAGAGGGAGC CAG GCTCCCTCTT           TTCACTGGCTTATGC 100 35
        pheS NONE
        pheT NONE
        ihfA 1661930 .. 1661944 - -12.8  -5.69793   ACAGGAAAGAAAAAA               GGCCGC AAA GCGGCC               TTTTTAGTTAGATCA 100 43
   CKO_01738 NONE
   CKO_01737 NONE
        btuE NONE
   CKO_01735 1658616 .. 1658632 -  -3.7  -2.76696   GTGTTTTTCAAGAAC              CCATTTA ACT TAAGTGG              TTGATATGAGCATTC  44 18
   CKO_01734 1658034 .. 1658078 -  -5.7  -3.58305   AATCAATTTCTTAAA TATAGATGATGAAGCGGCCGC TGG GTATCCGCTTTACCATCGATA GCATTAAATACGTCT  58 29
   CKO_01733 NONE
   CKO_01732 1656961 .. 1656973 -  -3.3  -3.42605   GGGATGTAAAAGACA                GGGTC ATA GAGCC                TCCTGCCTGTAGTGT  49 81
   CKO_01731 1655474 .. 1655501 - -11.4  -3.15861   CATGACGGCCAGGAA        TACCTG-CTGCGC AAG ACGCAGGCAGGTA        AGTTGCTGTTGACCA  77 49
   CKO_01730 1654770 .. 1654797 -  -4.8  -4.36914   TCTCGCCGGATAAAA        CTGGCCAGATGA CGAT TTATCAGACCAG         CGGGAATCCGTACGG  66 407
   CKO_01725 1650369 .. 1650390 -  -8.7  -5.78622   GCATCGCAAAAAAAA           CGGCTCC TTTTTACG GGAGCCG            TTGCGGATTAGAATC 100 52
   CKO_01722 NONE
   CKO_01721 1645175 .. 1645195 -  -6.9   -3.3353   TCTGCGATAAAGATA            TTTTGTGAC AAC GTCACACAA            CGGCGGTTGTCAGAC  61 18
   CKO_01720 1644832 .. 1644858 -  -6.5  -5.50499   TCATAGCCAAAAAAA         TAACCCCGGCA GAGCG TGTCGGGGTTT         TCTGTTGGTGTTAAT  91 67
   CKO_01718 1642760 .. 1642803 - -20.6  -3.41581   GAACGGAGTAATTAA CAACGAACGATCGGTATTGT ATGA ATAACACCGATCGTTCGTTG CCCCACCCGGCGCTT 100 160
        sufA NONE
   CKO_01716 NONE
        sufC NONE
   CKO_01714 NONE
   CKO_01713 NONE
   CKO_01712 NONE
   CKO_01711 1635702 .. 1635720 - -14.6  -5.06414   CCTGTGTAATAAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTGCCTGTG 100 55
   CKO_01708 1632876 .. 1632889 -  -9.5  -4.11216   GGGTTATCTGCAAAA               CGCCG TCGG CGGCG                TACTGGACCCATTTA  83 457
   CKO_01705 NONE
   CKO_01704 NONE
   CKO_01703 NONE
   CKO_01702 NONE
   CKO_01701 1627432 .. 1627456 -  -9.3  -3.65603   AAATACCGGGAATAA          GGGATGACG AAGCGAG CGCCATCCC          TGAGAGAATTATCCT  72 34
   CKO_01699 NONE
   CKO_01698 NONE
   CKO_01697 1623643 .. 1623658 -    -9  -2.66316   CTTTCCATGACATCA              CCCTGA ACAA TCAGGG               ATTCTGAAACTGCTC  64 20
   CKO_01696 NONE
   CKO_01695 1622132 .. 1622151 -  -2.1  -2.70932   CCTCTCGCGTAATGA            TCATCCG TTAGTG CCGATGA             TAGCCATCAACCATG  39 13
   CKO_01694 1621209 .. 1621228 -  -9.3  -3.65046   CGGTCAGGTGAATAA            CCGGGTA CAGATT TACCCGG             CGGCCATTTTTATCT  70 120
   CKO_01689 1617645 .. 1617659 -  -8.5  -3.64318   AATATAACGACAGAA               CCGGC GTAAT GCCGG               TTTTTTTTATTCAGG  69 100
   CKO_01687 1617139 .. 1617153 -  -2.9  -4.11371   GAACAGCCGTTAAAA               GAAAT TGGCT ATTTC               TTTAATCCGGTTGAG  58 325
   CKO_01683 1615059 .. 1615071 -  -4.1  -3.36878   CGCAGGGATCGATAA                CCTGT TCG ACAAG                CGCCACTTCCGTGAA  49 230
   CKO_01678 NONE
   CKO_01677 1610033 .. 1610049 - -15.1  -3.33261   CGCTAATCCTGATAA              CCCCCGC GCT GCGGGGG              TTTTTACGTCGGGTT 100 39
   CKO_01674 1606248 .. 1606261 -  -4.5  -4.16842   CGTATCGTCAATAAA               CGCGA AGAG TCGCA                GTCCATTGAGGTGCA  62 98
   CKO_01670 1604896 .. 1604915 - -12.2  -3.33473   GAGAGAGGAAAGACA            GAGGGAGA ATGC TCTCCCTC             AGAGGTAAATCAGTT  85 24
   CKO_01669 1603547 .. 1603569 - -17.8  -4.06866   GCATAAAGAGAATAA           CGCAGAAGGG AGT CCCTTCTGCG           TTTTAATGCTGCGCT 100 40
   CKO_01666 NONE
   CKO_01665 1601299 .. 1601314 - -10.4  -6.15828   TTCAGCAAAAAAAAA              GCGACC AGAT GGTCGC               TTTTTTATTTCGGCT 100 44
   CKO_01660 NONE
   CKO_01659 NONE
   CKO_01658 1595995 .. 1596010 -  -6.1  -3.17319   GTCAACTCAGCAATA              GCCAG GATGCG CTGGC               GCGACGCTGGCTGTT  54 348
   CKO_01654 1592542 .. 1592570 - -15.3  -3.14878   CGCGCTAATCCAACA        GACGTGTGGTCAG CCT CTGGCCACACGCC        TTTCTTCTGCTCTTA 100 38
        anmK 1590658 .. 1590671 -  -2.4   -3.3422   CAGGCCCGGAAAAAT               TCAG TTAACT CTGA                GTTCGCGGGTTCGCC  45 16
   CKO_01651 NONE
   CKO_01650 1589484 .. 1589508 -  -9.2  -4.42974   GGTATATAGAATAAA          GCGCTGACGC ACGCA GCGCTAGCGC          TTAACACAACAAATT  86 48
   CKO_01649 1588095 .. 1588116 - -17.3  -4.67697   CCCTAAAATAATAAA           GGGGCGTGG TTTC CCACGCCCC            TGCTGACTTTTTATT 100 39
   CKO_01648 1587160 .. 1587203 - -11.7  -3.79419   CCGGCCTATAAAACA GCCCGTAG-GCCCGGTAAGCG TTAG CGCCT-CCGGGCGCTTCGGGA AAACTCACAGCTGCG  93 30
   CKO_01631 1575106 .. 1575127 - -13.7  -2.71364   GCAGCGGTTTAAGCA           CGCAACGCC TGAT GGCGCTGCG            CTTATCAGGCCGACA  83 203
   CKO_01626 1569493 .. 1569520 -  -3.2  -3.14132   GCCGCTGCTGATGAA        GGGCGAACCGGT GATT ACCGTCGCGCCG         TTAAGCTGGAAAAAC  43 525
   CKO_01623 1565203 .. 1565214 -  -5.8  -3.53012   TGTGCGCTTCTGAAA                TGCC GGGC GGCA                 CAGCGCCTTACCCGG  58 66
        fumC 1563343 .. 1563394 -  -6.5  -4.43859   CACAACTGGAGAAAA GCCTGAACACGCCGCGCAGCGTGCA TCCC TGGACGC-GCGAAGAGTGG-CAGGC CAGGCTGGAGCGCGA  75 323
   CKO_01617 1559692 .. 1559723 -  -9.5  -3.30124   GGCTATTTTGCATAA     CGCCAG-CGCCT-GG ATGG CCGAGGCGCCTGGCA      CCCCGCTCTCTGACG  73 459
   CKO_01616 1559157 .. 1559167 -  -2.4  -4.07568   CGTTCCTGCTGAAAA                 TCGC CGC GCGC                 CCTCTTCATCAGGCG  56 215
   CKO_01612 1556393 .. 1556414 -  -4.3  -4.21676   ATAACCTACTGAAAA           TAGCGCCTG TGAT CTAGCGCCA            AAAAACAGTATTTAT  64 17
        pntA NONE
        pntB 1553289 .. 1553306 - -12.7  -4.70659   CTTCAGATGCAAAAA             CGGCCTC CTGA GAGGCCG              TTTTATGACTTGCGC 100 50
   CKO_01608 NONE
   CKO_01607 NONE
   CKO_01606 NONE
   CKO_01605 1550773 .. 1550789 -    -5  -3.92522   TTTGAAGGCGATAAA              GCCGCG CTAAC CGCTGC              CCTGAAAACCGCCGA  63 372
   CKO_01603 1549480 .. 1549518 -  -3.8  -3.79419   GGCTGCGACAAAATA  TCTGGCAGCACGGCAGT CGCTTT ACTACCGCGCAGCT-GA   TCGCTCAGGCCACCG  56 272
   CKO_01599 NONE
   CKO_01598 NONE
   CKO_01597 1546957 .. 1546987 - -15.5  -3.86897   TGCACGTTTGATAAA       GAGAATGCCCGGG TCGAG CCCGGGCATTCTT       TACAGCTCAACCAGC 100 32
   CKO_01595 1544683 .. 1544696 -  -4.5  -3.65514   TTTAAACTAAATTAA               GCGCGC TTT GCG-GC               CGTTAAAAGTTGATG  53 8
   CKO_01594 NONE
   CKO_01593 NONE
   CKO_01592 1542441 .. 1542465 - -15.8  -2.91144   TGATCTGTGAAATGA          CCGGGGAGTA TCGAC TACTCCCCGG          ATTACTGATTGCCTG  93 69
   CKO_01591 1540874 .. 1540884 -  -4.6  -3.97368   TCGTGAAGCCAGAAA                 CGCC AAC GGCA                 CCTGCGCGGATATAA  60 271
   CKO_01579 1528838 .. 1528867 -  -4.9   -4.4891   TGGACGATCACAAAA       CGCCAGGCTCAAG CCTG CTGAAGCCTACCG        CACAGTAAGCCGCTA  70 38
   CKO_01576 1527462 .. 1527477 -  -7.5  -4.35042   TCGATCACAAAATAA              GGCGC TTAAGC GCGCC               CCCACCCGGCAACGA  76 15
   CKO_01575 NONE
   CKO_01574 1525074 .. 1525088 -  -4.2  -3.06261   TGGCAATCTCTAAGA               GGTAAG ATG CGTACC               ACTCTCTCGCATTTA  47 47
   CKO_01573 1523625 .. 1523664 -  -5.9  -3.34236   AAAGTTATGTGACAA  CATGACCGAAATTCAACA TTCCC TGTCCA-TTCCGGTCATG  CCCTGTGCGACGTTA  56 38
   CKO_01572 NONE
   CKO_01571 1521770 .. 1521788 -  -7.4  -3.53012   TGTCGCCGCCTGAAA             TGTTGCTG CGC CAGCATCA             TGATATTTTTGCCGC  62 145
   CKO_01568 1518176 .. 1518214 -  -5.2  -5.30686   AACATTGACAAAAAA   TCAGAGCGTTGCCTGA TAAACAT TCAGGCAGCGCCCTTG   CGCTTAGCGGTCTAA  84 29
   CKO_01567 NONE
   CKO_01565 1515527 .. 1515545 -  -9.5  -6.06529   GACAGACAAAAAAAA             CCGCCGG ATAAA CCAGCGG             TGAATGCTTGCATGG 100 246
   CKO_01563 1513857 .. 1513885 - -10.4  -4.00868   TGATCCAGAATGAAA        CAGCGTTGCA TTACGAATG TGCAACGCTG        TGTAACAAAGAGAGG  84 45
   CKO_01562 1512343 .. 1512366 -   -11  -3.29043   AAGTGTTCTCCAGAA          TGTGCCCTCC CGCA GGAGGGCAAA           AGATCAGTTGCTGGC  77 29
   CKO_01561 NONE
   CKO_01560 NONE
   CKO_01559 NONE
   CKO_01558 1508089 .. 1508117 -  -9.6  -2.75577   TGATGCTAAAAGGGA       TGCGGGCCAGACCC TGG GGG-C-AGCCCGCA       ATGTGCTGACGGCAC  68 81
   CKO_01555 NONE
   CKO_01554 1505005 .. 1505040 - -14.8  -4.02736   AATCCACATGACAAA    CGCGGCGTGCT-GGTGA AGC TCACCGAACACGGCGCG    GCAATTTGTGAGCAA 100 425
   CKO_01550 1503761 .. 1503779 -   -11  -5.61881   CTTCAAAAATAAAAA             CCACCGCT ACC AACGGTGG             TTTTTATTTTTTCAG 100 56
   CKO_01549 1503185 .. 1503210 - -10.4  -3.86346   TGACTTTTTTATAAA         GGGCCAGAGC AGGTAA GTTCTGGCCC          TTTACTCGTTTCTTA  84 315
   CKO_01545 NONE
   CKO_01544 NONE
   CKO_01543 NONE
   CKO_01542 1495348 .. 1495365 -  -2.7  -3.03124   TTTTATGCTTTAACA             TCTCTCAC GAC GCG-GAGA             TTTACGGCTGATTCA  43 27
   CKO_01541 1493742 .. 1493757 - -11.8  -5.17488   AACATGAAAACAAAA              CCCGGC CGCA GCCGGG               TCAGATGATTAGCAC 100 34
   CKO_01538 1491367 .. 1491382 -  -4.8   -3.2285   ATAAATTCAATTTAA              CATAAT ATAC ATTATG               CGCACTAAAGAGGAT  52 167
   CKO_01536 NONE
   CKO_01535 1488042 .. 1488058 -  -4.4  -2.94281   GGACATACAAAATAG              CAGAAG GCGTG CCTCTG              GATATCAGTTATGGC  46 109
   CKO_01532 1483483 .. 1483509 -  -7.3  -3.06671   AGATTGATGGGAATA         TCAGCCGCC TGAAGGGAT GACGGCTGA         GTCAGTCTCACGGAG  57 59
   CKO_01529 1479600 .. 1479610 -  -2.6   -4.4831   ACGCATTAAAAATAA                 TATT CAA AATA                 AACTTATCACGCTAT  62 46
   CKO_01527 1479138 .. 1479148 -  -8.2  -2.92667   CCAACCTGGAAACCA                 CGGC ATC GCCG                 TCTTTTTTGTTAAAT  62 83
   CKO_01526 NONE
   CKO_01525 NONE
   CKO_01524 1475955 .. 1475986 -  -4.4  -3.33009   TAAAATGCTCCAGAA      CGTCATAGGCTTCCC CTT GCGGAGCC-ATAACG      GCCCCGCATCAACGT  51 44
   CKO_01523 NONE
   CKO_01522 NONE
   CKO_01521 NONE
   CKO_01520 1471953 .. 1471977 - -10.8  -3.93695   GGCATTATTCAGAAA         GCGAAAGCCGG ATGC CCGG-TTTCGC          AGGTGCTGAAAGCGG  83 173
   CKO_01518 NONE
   CKO_01517 1469372 .. 1469407 -  -2.4  -4.43859   GACAACCGTATAAAA    CACAGGCCCGGTAAGCG TAG CGC-CACCGGGCAAACA    CTCAGATAGAGGTAC  61 27
   CKO_01516 1469176 .. 1469204 -  -7.3  -3.19668   GATGATCGAAGGTAA        GGTGAGTCGTCGC TGG GCGAAGAAACACC        ACCCGCGCTGGTATC  59 85
   CKO_01512 1463418 .. 1463430 -  -4.8  -3.06911   ATTTAAATAACTATA                TGGC AAGAA GCCA                GAAAAAAAGCAAATA  50 157
   CKO_01508 1461877 .. 1461897 - -10.4  -5.25799   AAAACAAGATAAAAA            GCCAGCCC GCTAT GGACTGGC            TTAGAATTACGCTAC 100 48
   CKO_01507 1461057 .. 1461070 -  -3.7  -4.82901   GCGCCCGCAGAAAAA               GCGGC GGCG GCCGG                GGCAATAGAAACCAT  72 349
   CKO_01505 1459046 .. 1459059 -  -5.2  -3.20769   AAATAAGTCCAGGAA               GGGC GCGCGA GCCC                TTTTTAGAATTTATT  52 174
   CKO_01504 1457524 .. 1457560 -  -4.2  -3.30124   TTGTAGGCCGGATAA   GGCGCTGCGCGATTGCC TGAT GGCGA-CGCCCGGCGTC    TTATCCGGCCTACGT  51 63
   CKO_01503 NONE
   CKO_01502 NONE
   CKO_01501 NONE
   CKO_01500 1450315 .. 1450326 -  -7.2   -3.2756   AATGTGAACAACAGA                CGCC GCAT GGCG                 AATACCGTTTGCGAC  59 519
   CKO_01498 NONE
   CKO_01497 1447899 .. 1447911 -  -4.8  -2.55722   ACATCATTTAATTTA                GCAC GGGCG GTGC                CGATGATGGCCTTCA  47 38
   CKO_01495 1445403 .. 1445434 - -20.4  -3.27298   CGCTGTAAGCATTAA      GTAAAAAGGAGGGG CAAG CCCCTCCTTTTTAC       TGCGTAACAACATCC 100 72
   CKO_01493 1441877 .. 1441897 - -12.6  -5.23316   CATGACATTAAAAAA            TAGCGGGG CGATT CCCCGCTA            TTTTTTTTAGCTTTT 100 54
   CKO_01490 NONE
   CKO_01489 1439150 .. 1439189 - -10.7   -2.5955   AGGCCGGATAAGGCA  TTTAC-GCCGCGCCGCCG CCATC CGGCGAAGCGGCAGTTAA  AACTGGCGTCTGGCG  71 22
   CKO_01485 NONE
   CKO_01484 NONE
   CKO_01483 NONE
   CKO_01482 1430213 .. 1430225 -  -3.3  -5.78622   GTACGTCAAAAAAAA                GAGCA TAT TGCGC                GCGTTTTTCCCCTCT  88 86
   CKO_01479 1427844 .. 1427867 -  -4.6  -4.18018   TTGGCGGAGCGAAAA          CAGCAG-GCCT GGC AAACGCTGCTG          CGCCATTTGCCCGCT  62 477
   CKO_01471 1421960 .. 1421982 -  -9.1  -3.04263   AGGTGACCGGTAAGA          CGCCGTCGCA GTTA CGCG-CGGCG           AGCAAACGATAGCAC  67 14
   CKO_01469 1419982 .. 1420019 -  -5.5   -5.0133   GATGTCGGTAAAAAA   TAAGTTCACGCGCCATC TTCG GATGGCGCGTTTTTTTA    TGCCGCCCGGCGACG  80 23
   CKO_01465 1416034 .. 1416047 -  -2.3  -4.85782   GTGCTTAAAAACAAA               GACTG GCTA CAGGC                ATCGCTAAACTGGCC  72 453
   CKO_01457 1408262 .. 1408298 - -10.2  -3.06261   TTTTAAGTCTTAATA   TTGCCGGGTAACGACGC TAAC GCGTC-TTATCCGGCAT    TTATTTGAGGGCGCA  73 42
   CKO_01451 NONE
   CKO_01450 1403012 .. 1403036 - -12.1  -4.18161   GATAAATGGTGAAAA          CGGCGGAGGAA CAA TGCCTCCGCCA          GAGGGTCAGAGTTTG  95 31
   CKO_01449 1401911 .. 1401922 -  -5.8  -2.54098   GGTCTGAATGAATAT                CTGC AAAC GCAG                 GTGGTCTATTTGCAG  49 86
   CKO_01447 1399371 .. 1399388 -  -4.1  -3.05384   TTTTCTCTCATTGAA             CGTTGTT TGAC ATCAACG              CTTTATCTCACCCTC  47 41
   CKO_01445 NONE
   CKO_01444 NONE
   CKO_01443 1394749 .. 1394771 -  -6.9   -4.6635   AAATGCGCAAGAAAA           CACGGTCGC TGCGG GCGACGGCG           GGGTGATCCGGGGAT  78 333
   CKO_01441 1393000 .. 1393013 -  -3.8   -4.2704   TTCACGATCAACAAA               CGTC TGAAAG GACG                TGTGGATATGACGAT  64 419
   CKO_01439 1388216 .. 1388239 -  -9.6  -3.28791   AGCGTGCTGGCAGAA          CTTCAGCAGC AGGG GCTGGTGAAG           CATATCGGTCTGAGC  68 475
   CKO_01432 1381749 .. 1381765 -  -8.7   -3.4285   CTATTGAAGGGAGAA              GCGGTGT AAA ACACCAC              GATAAAACAATACAG  67 249
   CKO_01430 NONE
   CKO_01429 1379643 .. 1379666 - -16.8  -2.77043   GGGATTATCTGAAAG          TGCTCCCCTG AACG CAGGGGAGCA           GAAGGGTCAGAACAG 100 32
   CKO_01428 1379086 .. 1379117 -  -9.5  -3.09516   GTGCGCATTACCCAA      CGGCAAACG-CTGT AGTGA ACAGTCGCTCGCCG      CTGGAAGCTGCGGCA  70 45
   CKO_01425 1375019 .. 1375038 - -13.6  -3.45134   CGAATGAATTGACAA            GCCCGAAC CAAG GTTCGGGC             TTTTTTTCGTCCTGA  90 61
   CKO_01423 NONE
   CKO_01422 NONE
   CKO_01421 1373206 .. 1373217 -  -4.4  -3.36327   GCACTTTATGTACAA                TGAC AGGA GTCA                 CATTTTAGCGTGAGT  51 30
   CKO_01420 NONE
   CKO_01419 NONE
   CKO_01418 1371148 .. 1371160 - -10.5  -3.01712   TTGCGCGCCGGAAGA                GGCGC AGC GCGCC                AATATCCTGTCTGAA  69 422
   CKO_01413 NONE
   CKO_01411 NONE
   CKO_01410 1365087 .. 1365120 -  -4.5  -3.09516   TTGGTGAGCACGTAA     GCCTGAGCTACTCCC AATA GAGGATAATTCAGGC      ATAAGCAGGAGAAAT  47 125
   CKO_01409 1364127 .. 1364152 -  -2.5  -2.73124   TGGCAGGGCGTAAAC         CATGCCAG-TGG TGT CCAACTGGAGTG         ATGGCTACGTATTTG  39 146
   CKO_01408 NONE
   CKO_01407 1363814 .. 1363831 -  -3.3   -3.6279   AAATCCGCTTAACAA             TCCGGGC CGCA GTCCAGA              AGCGAACGTAATATA  51 82
   CKO_01406 1363371 .. 1363387 -  -2.1  -3.91352   ATATGTTGAATGAAA              CAGGGGG GAA CCTTCTG              CCAGATCAATAAATC  53 31
   CKO_01405 1362049 .. 1362060 -  -5.8  -4.00038   CATGATCATGACAAA                GCTG AAGA CAGC                 AAAGGGGAAGAAATT  65 317
   CKO_01403 1360745 .. 1360762 - -12.7  -4.19817   GGCAGTGAGCGAAAA             GACGCGG TATT CCGCGTC              TTTTTTAATTTGCGG  95 30
   CKO_01401 1357685 .. 1357701 -  -5.1  -3.09516   CGCCTGATCAGCGAA              CGAATGG TCG CGATTCG              CTCAGTCGTGCCTGA  50 472
         tpx 1356435 .. 1356452 -  -4.9  -2.53271   GGATTTGCAGAATAT             GCCTGGTT CAT AACCAG-C             TTCAGACGATTGATG  43 139
        pspF 1344499 .. 1344510 -  -2.2     -2.89   ACCCCCACAGAATGA                GAAC AACT GTCC                 CGGGCATGAGCGCTA  40 38
   CKO_01385 NONE
   CKO_01383 1343493 .. 1343515 -  -3.4  -3.07523   AACACCAAAGGAAAT           GCCCGT TCAGTTAAGTT ACGGGC           TTTGATACATGATTA  45 38
   CKO_01382 NONE
   CKO_01381 NONE
   CKO_01380 NONE
   CKO_01379 NONE
   CKO_01378 1337955 .. 1337992 -  -2.6  -2.88663   AGCCAGCGCCAGACA   CAGGATCAGCCAGGAA TATTTT CTCATGGGCGCTCCTG    CATTCGGGGCGCGTG  42 100
   CKO_01377 1336988 .. 1337002 -    -5  -3.28416   CAGTAGGTAGAGCAA               CTGACT TGT AATCAG               TAGGTCACCAGTTCG  52 171
   CKO_01375 1335656 .. 1335676 - -14.7  -3.76837   CAGAGAAGGGAATAA            TGGGCGACG CTG CGCCGCCCA            TTGCGGGAAGTGAAA 100 44
   CKO_01374 1334271 .. 1334291 -  -6.2  -3.14132   TGCCTGGCGCAGCAA           GCGCTCTTT CAGT AAAG-GCGC            GGTTAATGTGTTTCG  57 28
   CKO_01372 1332231 .. 1332256 - -11.2  -5.93809   CGGGCAGAAAAAAAA         CGGCCTTTCC GGTTAA AGAAAGGCCG          CTACATCAAAAACGT 100 40
   CKO_01371 NONE
   CKO_01370 1329594 .. 1329607 -  -6.7  -3.33261   TTTTAATTTTTATAA               CGGTA TCAG TACCG                GGGAGTATAAGGGAT  59 83
   CKO_01368 1328790 .. 1328811 - -11.7  -2.90763   CTCAGAGGGGAGAGA           TGATTTGCC ATCT GGCAAATCA            TCTGCAATGCGCTCA  77 38
   CKO_01367 1328222 .. 1328245 - -11.1  -5.26875   CGGCTAATGAAAAAA          GCCACGATA GTTATT TATCGTGGC           TTTAAATTTCACTGT 100 106
   CKO_01363 1325020 .. 1325038 -  -3.9  -4.62302   CAACACTGGCAAAAA            GAAAC-CG GATT CGCGTTTC             CTTCCGGGCATACCT  69 345
        ribA 1323740 .. 1323767 - -10.7  -5.47431   TTAAGACATAAAAAA        GGCCTGAT-AGC GCGGT GCTCATCAGGCC        TTTAATAGCAAAAAT 100 41
   CKO_01350 1315533 .. 1315544 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TAGC CGCC                 ATCCGGCAAAACCTT  61 48
   CKO_01346 1314231 .. 1314244 -  -9.5  -3.13343   ATTTCAATCAGTCAA               CGGCG ATAA CGCCG                AAAAATGAACACTTT  71 4
   CKO_01345 NONE
   CKO_01344 1312603 .. 1312619 -  -8.7  -3.14931   CCGACGTCGTATGAA              GGCGAAC CAG ATTCGCC              GTGCAGTGAAGCGTC  63 185
   CKO_01340 NONE
   CKO_01339 NONE
   CKO_01338 NONE
   CKO_01337 NONE
   CKO_01336 1303364 .. 1303395 -  -5.8   -2.7044   GAGGGAATGACAGGA      TTGGCCCGATAA-GC ATG GCATCATCGGGCCTG      TTGCCTGCGCAATAT  49 40
   CKO_01332 1299632 .. 1299655 -  -2.3  -4.41047   ATTCCGTAATCAAAA          GTTTTGGGC AAACTG GCCCTTAAC           ACGTTCAGGGTTATT  61 36
   CKO_01331 1299015 .. 1299031 -  -3.5  -3.67285   AGAACAGAGGGGAAA              CGCGCGC CAG GCTGGCG              TGAAGGGGATGCCAG  54 65
   CKO_01330 1298385 .. 1298395 -  -4.6  -4.74103   GCGTGAAGTGAAAAA                 CGCG ATG CGCA                 GATGGCGCTATGAAG  74 169
   CKO_01328 1297202 .. 1297221 -   -15  -2.89298   CATCTGATACAACCA            GGGCACCG TATT CGGTGCCC             ATGAATGCAAACCCC  93 48
         cls NONE
   CKO_01325 1294995 .. 1295015 - -15.5  -3.32997   CCGCTATAAATTTAA            GGGCTGACA TGA TGTCAGCCC            TTTTTTTTGGCATCA 100 63
   CKO_01318 1284745 .. 1284762 - -14.1  -5.82316   ATCAGGCAAAAAAAA             GCCCCCG AAAA CGGGGGC              TTTTTCAGAATGTCG 100 55
   CKO_01316 1283016 .. 1283032 - -13.7  -5.81032   GAAGGGCAAAAAAAA              TCCCGCC ACT GGCGGGA              TTTTAAGCAAACACA 100 48
   CKO_01311 1279188 .. 1279198 -    -4  -2.54896   GTTGTAGTGAATGCA                 TTAC CGG GTAA                 ATCCTGTTTAATGTG  44 68
        purU 1278121 .. 1278134 -  -5.3  -2.70932   GTGGTGGGGGAAGGA               TTCGA ACCT TCGAA                GTCGATGACGGCAGA  47 237
   CKO_01297 NONE
   CKO_01296 1265691 .. 1265703 -  -4.8   -3.6761   GCCGCTGAACAAACA                GCTG TCGGC CAGC                GAGGTGGCGGAGAGT  55 470
   CKO_01288 1253097 .. 1253109 -  -6.2  -2.74792   TCAGCAGGGCTAAAC                GCGC GTTAA GCGC                TAATGAAGGTGCGCG  53 70
   CKO_01287 1251121 .. 1251131 -  -3.2  -5.14965   ATTTTGATCAAAAAA                 TGGC ATA ACCA                 TTAAACAAAAATGAC  75 103
   CKO_01286 1250697 .. 1250710 -  -5.2  -3.59583   AGAATCAGCCGGAAA               GGGG ATTCAA CCCC                GGATTTGCCTGAGCG  56 68
   CKO_01281 1247747 .. 1247765 -  -8.9  -3.05343   GTCAGATGGGCAATA             TCGTGGA CAAAT TCCACGA             AGGCGGCAACGATAA  63 516
        lolB NONE
         ipk 1241077 .. 1241093 -  -6.5  -3.03159   GCAACGTCTGGAACA              GGGTGAC GTT GTCACCG              AAACTCAGCTTGCCC  55 44
   CKO_01271 1239982 .. 1239995 -  -9.5  -5.76633   TTACAGACAAAAAAA               CCCGC CGCA GCGGG                TTTTTTAGCCGGGTT 100 44
   CKO_01270 1238173 .. 1238203 -   -12  -4.89477   TTTTCAATAAGAAAA      CTTGCCGGTCTGT TGAGAT ACAGACCGGCA-G       TCGGGATTAGATATC 100 32
   CKO_01269 NONE
   CKO_01268 1237121 .. 1237132 -  -5.8  -2.59742   CTCAATGTGTACAAC                CCTG ACAG CAGG                 TCTCCTGGCTCACGG  49 246
   CKO_01267 1235822 .. 1235853 -   -13  -2.91728   ATTCTGAATACCAGA      GGCGCGCTATGCCC GGTA AGACATAGCGCGAC       ATAAAGATTATTGAG  82 33
   CKO_01266 NONE
   CKO_01265 NONE
   CKO_01264 NONE
   CKO_01263 NONE
   CKO_01262 NONE
   CKO_01261 1230842 .. 1230863 - -10.9  -3.01712   CGCGTCGGTTTAAGA           CCAGTCAGC TTGG ACTGACTGG            TCATTGTCTTAACCA  75 34
   CKO_01259 1229653 .. 1229676 -  -6.6  -3.02471   TGCCTATTATACACA          GCGCGCGGCA AAAA TGCCGCACAT           CACTGCTTATTGTGC  55 32
   CKO_01258 1228402 .. 1228419 - -11.3  -5.63517   GCTTTAAATAAAAAA             TCCACGC AATT GCGTGGA              TTTTATGGGTTTTTG 100 81
   CKO_01255 1225800 .. 1225813 -  -3.1  -3.05597   GTTATGGGTCAAAAG               CTCAG ATCC CTGAA                AACCACAATTCCCTT  43 172
   CKO_01254 1225338 .. 1225350 -  -3.3  -4.08216   TCAGCTTGCGGAAAA                CAAGG ATG CCTGG                GATGCGTTTACTGTA  58 308
   CKO_01249 1218259 .. 1218289 - -21.3  -3.93658   AACAGGCGGAAAGAA       CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG       TCAGGGAGGAGTTTA 100 58
   CKO_01248 1211971 .. 1212001 - -10.5  -3.33711   GATTCACAAAGTCAA      TGGAACGCCAT-GC GTTC GCGATGGCGTTCCG       GGGAAAATCAGTTTG  77 48
   CKO_01247 NONE
   CKO_01246 NONE
   CKO_01245 NONE
   CKO_01244 1198903 .. 1198915 -  -4.9  -3.70033   AATTGAAAATGATAA                CTATT TCT AATAG                TGGTGCTACCCGAAA  59 77
   CKO_01243 1196735 .. 1196758 -   -11   -2.7814   AGCCAGATTTGAAAC          TGGCAGCTCA AGTC TGAGCTGCCC           TGGGCGGGATAAGCG  74 82
   CKO_01241 1194845 .. 1194864 -  -2.8  -4.25676   AATGAAACGGCAAAA            CATGCCCA ATTC TGGAAATG             TTGCAGCGAGGTTCT  60 221
   CKO_01236 NONE
   CKO_01235 1189895 .. 1189907 -  -9.1   -3.4178   AGGACGCGATGACAA                TCCCC TGG GGGGA                CGTGTCCACGGCGTA  66 484
   CKO_01233 1187649 .. 1187665 -  -3.5  -3.14132   GTGCTGCGTGATGAA              CTGCTGC GAC GCGGCTG              GGTGCGCCAGATTCG  45 363
   CKO_01231 NONE
   CKO_01230 1186294 .. 1186304 -  -4.6  -4.30576   GGCTTATCATGAAAA                 CGGA AGG CCCG                 CTGCACCGAAGCATG  66 453
   CKO_01226 1183922 .. 1183952 -    -4  -3.08522   TATCCATTTGAAAAG       CCATTAACCTTATT TAA AAAATGGGTAATGG       TGATGGTTAATAAAT  47 85
   CKO_01225 1181449 .. 1181483 -  -4.4  -4.85782   TGGCTGAAAAATAAA     TCCCCTTATTCA GCAGAACGTCA TGAATAAGGGGC     GAATTTTACAGCGCG  73 31
   CKO_01223 1180202 .. 1180217 -  -4.6  -4.37886   CGATCGGTCAGAAAA              CGGTGC TGGC GCATCG               AAACGCGTTAATGAC  68 193
   CKO_01217 1174131 .. 1174146 -  -7.6  -3.84808   GTGAATCCAGAACAA              GGTGTA AAAT TACACC               AAAAAATCACTTGAG  71 82
   CKO_01214 NONE
   CKO_01213 1172606 .. 1172629 -  -2.4  -3.08966   GCAAAGGCGAGGTAA          TCGTCAGAAT TGCG ATCCCGACCA           ACGAATGCCGCCGCT  42 62
   CKO_01212 NONE
   CKO_01211 NONE
   CKO_01210 NONE
        treA 1167319 .. 1167336 -  -8.4   -5.1356   TGCCAGGAAGAAAAA             TCCGCG ACGGCG CGCGGA              TTTTTGTCAGCATGA 100 54
   CKO_01208 NONE
   CKO_01207 NONE
   CKO_01206 NONE
   CKO_01205 NONE
   CKO_01204 NONE
   CKO_01203 1160679 .. 1160704 - -18.3  -3.25942   AGCTTCTGATAGCAA         CCCGGCCTGCA ATTG CGCAGGCCGGG          TTCGTTTTCATTCGG 100 49
   CKO_01201 1157977 .. 1158001 -  -8.5  -2.56095   CCTATACTTAAGGGA          CTGGCGCAAGA ACG TCTTGCGCATG          CTTTCACTGGAAAGA  61 226
   CKO_01199 1156791 .. 1156801 -  -4.6  -4.75174   CAGCGAACTGAAAAA                 CCCG GAG CGGA                 ATATCTCGATGGGGA  74 313
        ldcA 1155338 .. 1155352 -  -4.2  -3.89411   TGAAAAGACTAATAA               TGGCTG CGG CATCCA               ACGTTATGTTACTCC  58 123
   CKO_01196 1153586 .. 1153599 -  -8.1  -3.30124   GTGTAGGCCGGATAA               GGCGT GTCA ACGCC                GCTATCCGGCAGCGT  67 46
   CKO_01192 NONE
   CKO_01191 1149249 .. 1149260 -  -5.8  -3.30124   TTGTAGGCCGGATAA                GGTG TTTA CACC                 GCCATCCGGCAATTA  56 43
        nhaB 1146407 .. 1146438 - -13.1  -4.68994   ATTATCATGCAAAAA      GTCAAACCGGGCA GTGATT TGCCCGGTTTGAT       GTTATGAGAATGTAG 100 27
   CKO_01187 1145747 .. 1145762 - -10.4  -5.78622   TCAGGCGAAAAAAAA              CGCTCC CGAA GGAGCG               TTCTGTTATCGACTA 100 31
   CKO_01186 1145310 .. 1145322 -  -4.8  -3.14931   CCCATTGTTCAGCAA                GCGT TAATT ACGC                TTTTTTCGCCTGATA  52 20
        minC 1142899 .. 1142911 -  -4.9  -3.29973   TTAAAAAGGGATCAA                TTCAA CGG TTGAA                CTGCCAAAGCGTTAT  54 9
   CKO_01181 NONE
        minE 1141742 .. 1141757 -    -9  -4.95484   CAGCAGCAAATAAAA              GGCAGA ATAC TCTGCC               TTTTTATCGCGTTGC 100 57
   CKO_01178 1139439 .. 1139454 -  -7.6  -3.51232   GCGTCGGCAAATCAA              CCAGTT GCTT AACTGG               CACTGGAAGTTAAAA  62 168
   CKO_01175 1136497 .. 1136521 - -14.4  -4.30576   GTTTTATCAGTAAAA          GAAACAGCGG CTGGT CCGCTGTTTC          TGCATTAATACGGAC 100 30
   CKO_01171 1132647 .. 1132659 -  -6.3  -3.23692   GAGGATGAGGACGAA                TAACG TCG CGTTA                CACTGCGGCGATAAT  57 23
   CKO_01168 NONE
   CKO_01167 NONE
   CKO_01166 1128860 .. 1128886 - -12.4   -4.9218   GATTGATGAGAAAAA         TTCGCCCATC AGTGGGA GATGGGCGAA         GTGGCAGGCTATGTT 100 44
   CKO_01165 NONE
   CKO_01164 1127111 .. 1127123 -  -4.1  -3.57144   GTTCGTATTGTTAAA                GAACA ACC TGCTC                ACTACGAAGACGAAT  53 69
   CKO_01161 NONE
   CKO_01160 NONE
   CKO_01159 1122414 .. 1122433 - -16.4  -5.71712   CTCCAGATAAAAAAA            CCGGGGCC AAAG GGCCCCGG             TAGTGTACAACAGAA 100 41
   CKO_01158 1121870 .. 1121881 -  -4.4   -3.1372   CAGGCGGGATGAATA                TAGC CTTA GCTA                 TGTTTTTTTGATCGC  49 79
   CKO_01157 NONE
   CKO_01156 1120498 .. 1120517 -  -2.7  -3.54424   CTGGATGTCGCGAAA            GTCGCCA TTAAAG CGGCGGC             GAAACGTTATCCGCA  49 455
   CKO_01153 1117544 .. 1117554 -  -4.6  -3.23733   GCTATGGTAGAAAAG                 CCGC TGT ACGG                 GCGTAAGCCTGTCGA  49 332
   CKO_01150 NONE
   CKO_01148 1116126 .. 1116144 - -11.8  -4.79667   AAAACGCATTAAAAA             GGCATAAC CAC GTTATGCC             TGATATTTATGCAGA 100 61
   CKO_01147 NONE
   CKO_01145 1113642 .. 1113659 - -11.3   -5.0538   TGGCATTCTAAAAAA             GCGCATC AGAT GATGCGC              TTTTTTTTTACGCCA 100 33
   CKO_01140 NONE
   CKO_01139 1105146 .. 1105171 - -12.5   -3.9712   GCAGTGTAGCATAAA         TGCTCCGGCGC GAGC ACGCCGGAGCG          GGGGAGTTAACGTGG  95 32
        yebU NONE
   CKO_01137 1103282 .. 1103297 - -10.4  -4.32678   GGGCGAAATAAATAA              CCCGTC TGGC GACGGG               TTCTTTTTGAGTCAG  90 37
   CKO_01136 1102882 .. 1102892 -  -8.2  -3.64703   TGCGGGTCAGGTAAA                 CGGC ATT GCCG                 GGGCCGATCACTTCT  68 148
   CKO_01134 1099976 .. 1100009 - -12.6  -4.13816   CTCACAAAAAGATAA     GCAAGCGCCGCATAC GGAGT GTATG-GACGCTTGC     TGTATTATTAGAACT  95 33
   CKO_01133 NONE
   CKO_01131 1098825 .. 1098853 -  -6.1  -5.45652   ATTTCCAATAAAAAA       CCGCAAG--CCTC ATGCA GAGGAACTTGCGG       TTTTTTCGTTGTTGC  91 427
   CKO_01124 1096822 .. 1096836 -  -4.2  -3.08471   TATAAGTTTATTTAA               CTTTCG GTT CGTAAG               GTAAGCGTGACAGGG  47 3
   CKO_01123 1096028 .. 1096041 -  -2.3  -3.07233   CTATAACTCGCAACA               TGGGG TGCT CCCGA                CCGAAAACACCTAGC  42 36
   CKO_01122 1095054 .. 1095068 -   -10  -3.57615   CGAAGAGTGGGGAAA               TCCGCA GGA TGCGGA               ATACTACGCGTATAT  71 323
        purT 1090309 .. 1090335 - -10.1  -2.87792   AACAGTAAGCCAAAT        GCCCGGT-GGCG CCGA CGCTTACCGGGC         CTACGTTTTATAGGG  69 79
   CKO_01114 1087188 .. 1087198 -  -5.4  -3.91488   AACCTGTTCAAAGAA                 TCCT GGC AGGA                 TCTGCCGCAGAACAA  61 448
   CKO_01111 1084773 .. 1084785 -  -3.4  -3.64703   CTCCGTTGACTGAAA                CAAC TTGGT GTTG                CGTGAACATTGATCC  51 115
   CKO_01110 1083230 .. 1083247 - -11.3  -5.99154   CATCAAATAAAAAAA             GCCTCTC GTCA GAGAGGC              TTTTTTGTTACCCGG 100 87
        znuC NONE
        znuB NONE
   CKO_01103 NONE
   CKO_01102 1077859 .. 1077884 -  -6.8  -3.86372   CGAAGTGAAACATAA         CGGCGCCATC TCTGCG GATATCGCCG          CTCAGGCGCTGGATA  65 291
   CKO_01100 1076142 .. 1076154 - -10.5  -3.63515   GTTTATGGCGAAGAA                CGCGG ACT CCGCG                CTTAAGCTGGGTCAG  76 285
   CKO_01094 NONE
   CKO_01093 1071216 .. 1071227 -  -5.8   -4.0896   AAACTCCCTTTAAAA                TGCC TGAT GGCA                 CTGTCTATGATAGGT  66 48
   CKO_01092 NONE
   CKO_01091 NONE
   CKO_01090 1068761 .. 1068772 -  -5.8  -3.16742   GGCAAGCCTCACCAA                TGCG TTAT CGCA                 ATCATGGATTGTCCA  54 307
        argS 1065528 .. 1065545 -  -9.8  -5.79595   CGGGAAAATAAAAAA             CCCGCG ACATAG CGCGGG              TTTTCACATCACTCG 100 47
   CKO_01084 1065316 .. 1065329 -  -3.7  -3.38812   CGCCGCCTAATAATA               CGGAG GCGT CACCG                GCATGACAGACAAAA  49 3
   CKO_01083 1063167 .. 1063177 -  -8.2  -4.10657   GCAGACGGCTGAAAA                 CGCG ATT CGCG                 GTATCGTGAAACACA  77 288
   CKO_01077 1056263 .. 1056274 -    -3  -2.82015   GTGATATCCATGATA                TGAA ATTG TTCA                 GTTTCAGATGGGGTG  42 97
   CKO_01076 1055550 .. 1055573 -  -3.9  -3.48772   AAGCGGGGGAGATAA          TAGTCCG GGTCCATTTT CGGACTA           TTATCAGATTCGCCT  51 106
   CKO_01075 1054754 .. 1054770 -  -3.6  -3.17901   ATACCGCCAAGGCAA              CGCACC AGTGG GGTGAG              ACGCTGACGTAAAAG  47 67
   CKO_01074 NONE
   CKO_01073 1051081 .. 1051108 - -17.2  -2.52896   TGATGCGGTAAGGTA        TCCTCAGGTTGT GCCG ACAACCTGAGGA         ACGTTTAGCGCAGAT 100 30
   CKO_01065 NONE
   CKO_01064 1042885 .. 1042895 -  -3.2   -3.9777   GTGAACATTGAGAAA                 CTGC TGA ACAG                 CGATGAGATGGCGCT  56 230
   CKO_01060 1039022 .. 1039035 -  -2.3  -3.87551   ATGAGGAAATTGAAA               CCCAC GAAA GCGAG                GCGGAAGTTCCTGCC  53 307
   CKO_01055 1036170 .. 1036181 -    -3  -4.78107   GACGATTATTAAAAA                TGAT ATTA ATCA                 CTGGCAGCAACGGTT  70 132
   CKO_01048 NONE
   CKO_01046 1028373 .. 1028418 - -12.5  -4.10552   GCGCACTAAAGTAAA GCGACTGCGTAACAGCCTCCCG GCA CGGGAGGC-GTAACGTCGTGGC AATATAGCGGTTAGT  95 36
   CKO_01043 1026742 .. 1026761 -  -9.3  -4.12267   ATGAGAATAATTAAA            GCCAGCA GCGTCA TGCTGGC             TAAAGATATTAATAC  79 34
   CKO_01042 1026052 .. 1026070 - -14.6  -3.61178   GCCATTGAGCCTAAA             CGGTGAGG GGG CCTCACCG             TTTAATTTTAGTTTT  95 33
   CKO_01040 1024343 .. 1024357 -  -8.5   -5.5762   ACTAAACACAAAAAA               GGGGC TTAAC GCCCC               TTTTGTTTTATCCCA 100 33
   CKO_01030 1019219 .. 1019245 - -17.4   -4.2349   GTGCCAGACGCAAAA         CCGGCTGAAAGT TTC ACTCTCAGCCGG         TTTCCTGTTACTGGC 100 33
   CKO_01014 NONE
        fliS NONE
   CKO_01012 NONE
   CKO_01011 NONE
   CKO_01009 NONE
   CKO_01008  996985 ..  996999 -  -2.8  -5.00616   CTGCTGTGTAAAAAA               TCATCC AGG GGATTA               GCATGTCAGCAATAC  72 406
        fliF NONE
        fliG NONE
        fliH  993429 ..  993443 -  -7.8  -2.80816   CGCGTAGTCATCAGA               CGACTC CGG GAGCCG               CCAGGCGGCAGAGTT  59 6
        fliI NONE
        fliJ NONE
   CKO_01000  990340 ..  990354 -  -2.8  -3.59979   CCTGTCCACGGCAAA               GCGT GGAAAAG ACGC               GGATAATCATGCTAC  49 49
        fliL NONE
        fliM NONE
        fliN NONE
   CKO_00996  988005 ..  988028 -  -2.2  -2.51259   GAGGGATAACAAACG          GCGCATCAGG ATCT CCCGGAACGC           TTCAACAAACTCTTC  39 7
        fliP NONE
        fliQ NONE
        fliR  986161 ..  986175 -  -2.8  -2.77962   TTTTAGATTTTAAAT               TTAGGA AAA TCCTTA               GTAAGACAGGATAAA  42 43
   CKO_00992  985132 ..  985144 -  -7.7   -3.0792   GAAGAGTTTAGTGAA                GGTAC GAT GTACC                TGGTTTCGCTGGAAG  57 170
   CKO_00990  984590 ..  984615 -  -3.3  -4.34267   GCAGATAAGGTAAAA         CGC-ACATCAGA TTT TCTGGTGTAACG         AATTTTCAAGTGCTT  62 97
   CKO_00987  982304 ..  982325 -  -5.9  -3.07113   CACCACGCGATCGAA           CATTTTGCT CAGC AGCAGAATG            GTCTTATTGCGCTCA  52 285
   CKO_00985 NONE
   CKO_00983  979967 ..  979977 -  -6.8   -3.3353   TGCGCCAGAAAGAGA                 GCCA GCA TGGC                 GGACGTACACGATAA  58 480
   CKO_00979  976146 ..  976178 - -15.7  -5.18726   GCGTGATAATAAAAA      GCCCGCATCATGAAA TTA TTCCATTATGCGGGC      TTAGTGCAGTATCTA 100 48
   CKO_00975  973724 ..  973737 -  -3.1  -3.23855   TTGGGGAAAAATAAG               CCACT CTGA AATGG                AGCGCCTGCTGTTCG  45 152
   CKO_00974 NONE
   CKO_00972 NONE
   CKO_00971 NONE
   CKO_00970 NONE
   CKO_00969  965921 ..  965933 -  -3.4   -3.7511   CGGTTTAGAACAGAA                CTGA GTAGT TCAG                ACCAAAGGTGCGGCC  54 2
   CKO_00968 NONE
   CKO_00967  964415 ..  964435 -  -5.5  -3.12668   CATCTGCACATTTAA            TATGTTTAG CAT CGAAACATA            TTGACGATTCTTTTG  54 10
   CKO_00966  963081 ..  963097 -    -5  -2.90075   CCTGGCGGAAGTACA              TGCCCG TGGCG CGGGCG              CATTTATGAAACCGC  49 489
   CKO_00960  957212 ..  957228 -  -5.1  -4.07885   CAGGGTCTGTTAAAA              TGCCAAA TTA CCTGGCA              TCATGGCAACCACCA  64 374
   CKO_00958  956152 ..  956169 - -12.7  -5.07011   GATATAAAGCAAAAA             GCCCGCT AAAA AGCGGGC              TTCTTTAAATTTGGC 100 213
   CKO_00953  952310 ..  952335 - -14.7  -4.57482   TTACTGATAAATAAA         GCCGTCCCCAC CTAA GCGGAGACGGC          TTCGTTATACTAACA 100 43
   CKO_00952  950169 ..  950188 - -13.6  -5.24129   TGTTGCCATAAAAAA            TGGTGCCC AAAA GGGCACCA             GATGCATCAGGTACC 100 32
   CKO_00951  949074 ..  949086 -  -2.6  -5.47399   GTAATGTTAAAAAAA                CGCC AACCG GGCA                AGCGCTTAAACAAAG  82 118
   CKO_00950 NONE
   CKO_00949 NONE
   CKO_00948  945999 ..  946023 - -15.9  -4.03204   TATTAAAGCCAGAAA          GTAGATCTGCT ATC AGCAGATCTAC          TATGAAAGGCGTTGT 100 56
   CKO_00940 NONE
   CKO_00939  936272 ..  936292 -  -3.9  -3.33009   CAAAAGGCTCCAGAA            GCCAGCTCA TGA TGACCTGCC            TTTATCTTCATATTC  49 11
   CKO_00938 NONE
   CKO_00937 NONE
   CKO_00936  933297 ..  933318 -  -5.1   -4.3534   CCGCAAGGAGTAAAA           GACATAACG ATAA CGTTACGGC            CGGAAAGTATTAATG  69 482
   CKO_00930 NONE
   CKO_00929  927469 ..  927480 -    -3  -3.75824   TACGTTATAACATAA                CAAT TGAT ATTG                 AAATTTTTTACATCC  52 52
   CKO_00928 NONE
   CKO_00927 NONE
   CKO_00926  924381 ..  924411 - -18.4  -2.71745   GTTCGAAGAATGAAT       CGAAGGCACCCG CATTTGT CGGGTGCCTTCG       TATGAAAGCGAAAAG 100 50
   CKO_00922  921963 ..  921982 -  -3.5  -3.59233   CAATTATGAAAGCAA            CCGACAA TCCTTG TTGACGG             TTATATTTATTATAG  51 127
   CKO_00920 NONE
   CKO_00918  919418 ..  919429 -  -2.2  -3.38316   CCATTATCGAACTAA                CCTG ACCC CAGA                 TTTGACCACCAATTT  45 376
   CKO_00917  918074 ..  918092 -   -11  -3.60814   AAAGTCTATATAGAA             CCACCTCC TGT AGAGGTGG             TGGTAATTTGCCAGA  82 61
   CKO_00912  910549 ..  910579 - -21.3  -3.93658   AACAGGCGGAAAGAA       CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG       TCAGGGAGGAGTTTA 100 58
   CKO_00911 NONE
   CKO_00910  904257 ..  904287 - -10.5  -3.33711   GATTCACAAAGTCAA      TGGAACGCCAT-GC GTTC GCGATGGCGTTCCG       GGGAAAATCAGTTTG  77 48
   CKO_00909 NONE
   CKO_00908 NONE
   CKO_00907 NONE
   CKO_00906  891189 ..  891201 -  -4.9  -3.70033   AATTGAAAATGATAA                CTATT TCT AATAG                TGGTGCTACCCGAAA  59 77
   CKO_00905  889069 ..  889089 - -11.2  -4.08945   ACTAGTGGTGTAAAA            GGGATACC TTTTC GGTATCCC            TTTTACAATAATCAG  89 37
   CKO_00904  887262 ..  887274 -  -4.8  -4.21676   ATAAGGGATGCAAAA                CCCT TATTT AGGG                TTGTCGGCCATTACA  67 54
   CKO_00903  886825 ..  886845 -  -3.4  -3.15758   ATAAGTGCTCAGTAA           TTCAGCTGA ATAT TCAG-TGAA            TGGTATAGTGTCATA  47 158
   CKO_00902  885976 ..  886001 - -10.5  -4.34402   TGGTGCATATTAAAA         TGTGCGGAG CTATTCTC CTCCGCACA          TACAGATTTAACGTC  90 232
   CKO_00901  885633 ..  885644 -  -4.4  -4.25873   GTTGCATAAAAAACA                CAGA GTTA TCTG                 ACATATTTCCAGACA  64 19
   CKO_00899  884786 ..  884811 -  -6.1  -2.72559   TCAGTAAACAAGTGA         CATGCAGGGTC TGCT GATACTGCATG          CTGTGGGAACAGAAT  53 50
   CKO_00898 NONE
   CKO_00897 NONE
   CKO_00896 NONE
   CKO_00895 NONE
   CKO_00894 NONE
   CKO_00893  878893 ..  878918 -  -9.3  -3.08298   CAACTAAATTAGATA         TATGAAAATAT AATT ATATTTTCATA          TGATGATATTTCGGG  67 64
   CKO_00892 NONE
   CKO_00891 NONE
   CKO_00890  877127 ..  877144 -  -4.3  -4.82901   TTCCTTTTATAAAAA             TATAAAA ATAT TTTTATA              GGTTAATTGGATTCC  73 28
   CKO_00889 NONE
   CKO_00888 NONE
   CKO_00886 NONE
   CKO_00885 NONE
   CKO_00884 NONE
   CKO_00883  873162 ..  873181 -  -3.4  -4.83169   AGCCCCCCACAAAAA            CCGGCACG TGGG CGTGCCTT             TTTGCTCGCTGGGGC  71 278
   CKO_00881  872700 ..  872746 - -28.4  -2.52676   GATGGGGTCAAGTCA TGGAGTCATCGCATGGAGTC GCAGCTT GACTCCATGCGATGACTCCA TCAAATGACTCCATA 100 26
   CKO_00880 NONE
   CKO_00879  869640 ..  869653 -  -2.3  -3.83561   CGTGGTGAAAAAAAC               GTCCC CGGT GGCAC                ATCTTCCCTTATGAA  50 516
   CKO_00865  832441 ..  832451 -  -2.4  -4.08394   ATACGTTGTTTAAAA                 CCTG CTT CGGG                 CACAAGATGGGGCCA  56 367
   CKO_00861  828552 ..  828565 -  -3.7  -4.03078   CCATGATAGCAGAAA               GGCGC CTCG GCGGC                TATGCGCTCAGCATG  59 488
   CKO_00858 NONE
   CKO_00857  818077 ..  818089 -  -2.7  -4.43681   GACGGAATATGAAAA                TCAAT ATT ATCGA                CGGCTCAGAAGTGTC  62 59
   CKO_00856  817612 ..  817651 -  -3.5  -3.25824   CATCATGCATAAAAT CGACAGACCAGCTCAG-GT TCAG ACTCCG-GCAGGCCTGACG  GATACTGAGTTCGAA  47 85
   CKO_00855  816682 ..  816715 -  -5.2  -3.53722   GCCATAGTTATAGAA     GATACTGAGTGGGG GTGTAT CCACTCGCAGTATC      ACTACCAAGATAAAG  55 437
   CKO_00849  811670 ..  811689 - -12.8  -3.26444   TTGCGTAAGAACAGA            CGGAGGCC AGAT GGCCCCCG             TACAGGGATTAGACG  81 34
   CKO_00848 NONE
   CKO_00847  808293 ..  808309 -  -4.3  -4.65895   CCCTCTACCCAAAAA              GCCCACT TTT AGCGGGT              TTTTGGTTTTCAGCA  71 48
   CKO_00845  807210 ..  807221 -  -5.8  -3.64703   CCGGCTGGATCGAAA                CCGA AGCT TCGG                 TAGCGATGGCAGAGC  60 434
   CKO_00842  805830 ..  805843 -  -2.4  -3.21924   GTACGCCGGACAAGA               GGTT CGGCAT AACC                ATGTCCGATTTGAGC  43 93
   CKO_00840 NONE
   CKO_00839  802473 ..  802490 - -12.7  -4.51196   GCCAAATTTAGAAAA             GCCCGCT TTTT AGCGGGC              TTTTTGCTTTCCGTC 100 98
   CKO_00835 NONE
   CKO_00834 NONE
   CKO_00833 NONE
   CKO_00832  795496 ..  795531 - -26.4  -3.91897   CTCGTCACGGATAAA    TGGCAGAAAGCCCGCT AAAA AGCGGGCTTTCTGCCA     GGGATCGCCTTCGTC 100 47
   CKO_00830  793501 ..  793524 -   -11  -4.37658   AATTGCCTGATAAAA          GGGCCGAATA ACTA TTTTCGGCCC           TGGCGTGCATCATTT  95 35
   CKO_00829 NONE
   CKO_00828  792141 ..  792173 -  -6.3  -3.02144   CTACGGTCTGCAATA     TCTGACCCGCCAGCG ACTGA CGCTGGCGGG--AGT     AGGCTCTTATATCCT  55 177
   CKO_00827  791902 ..  791925 -   -11  -4.37092   AGTTGCCTGATAAAA          GGGCCGAATA ACCA TTTTCGGCCC           TGGCGTGCATCATTT  91 35
   CKO_00824  788944 ..  788965 -  -5.8  -4.11751   ATCAACCGCTGAAAA           CCACCGTC GAAGCG GACGGCAG            TCGCTGGATTGAAGT  67 199
   CKO_00803  771280 ..  771313 -  -8.2  -2.81208   TTTCATTCAAAACAG     GCGTCATTACACCA TTGCGT TGGCATAATGGCGC      GTAACAGGTAATTAA  62 213
   CKO_00801  770674 ..  770688 -  -7.8  -3.86252   TGTTATCAAAGACAA               TCCGCC GCA AGCGGA               ACCTGCTCGTTCGCA  68 416
   CKO_00798 NONE
   CKO_00797 NONE
   CKO_00796 NONE
   CKO_00795  765158 ..  765168 -  -8.2  -3.53444   GTATCCTTTGTTAAA                 GCGC CAC GCGC                 AGTTCCTGCGGGTTT  69 10
   CKO_00794 NONE
   CKO_00793 NONE
   CKO_00792 NONE
   CKO_00791  762064 ..  762075 -  -5.8  -2.52676   CATCCGCGCAACTGA                TGGC TAAT GCCA                 GACCACTAACTTCAA  49 87
   CKO_00790 NONE
   CKO_00789 NONE
   CKO_00788 NONE
   CKO_00787 NONE
   CKO_00786 NONE
   CKO_00785 NONE
   CKO_00784 NONE
   CKO_00783 NONE
   CKO_00782 NONE
   CKO_00781 NONE
   CKO_00780 NONE
   CKO_00779  752787 ..  752804 -  -3.3  -4.08767   TGCAGTCGGGCAAAA             TCAGGCG GAAA CGCCAAA              TGTGACCTTGTCACT  59 8
   CKO_00778  751365 ..  751383 -  -2.4  -4.72556   TGAAAAAGGATAAAA             CCATTG TCATCTG CAACGG             CTAAAAGTAATGTTT  63 470
        sbcB  746367 ..  746385 - -10.3   -5.1287   TTCACAGGTAAAAAA             CCGGAGA CATGT TCTCCGG             TTTTTTTATGCAAAA 100 188
   CKO_00772  744857 ..  744869 -  -3.3  -4.69656   AATCATTCAATAAAA                GAGGC CGG GCTTC                GTACCGGATAGATAC  67 0
   CKO_00770  744330 ..  744347 -    -4  -3.71848   CTGGTGCAGGAAGAA             GAGCCG TTGAGT CGGCGC              ACAATAAAACGGTTC  53 385
        hisG NONE
        hisD NONE
   CKO_00764 NONE
   CKO_00763  738181 ..  738195 -    -5  -2.78018   AGCCGGTATCAAGGA               TGACGA CGT TCATCA               CAGCACTCCTTTAGA  49 23
        hisH NONE
   CKO_00761 NONE
   CKO_00760 NONE
   CKO_00759  735471 ..  735485 - -12.8  -5.28176   CCGACCTACAAAAAA               CCGGGC ATT GCCCGG               TTTTTTCGCATCAGA 100 43
   CKO_00750 NONE
   CKO_00747 NONE
   CKO_00741  717818 ..  717830 -  -4.8  -4.03001   GAAAAAATGAAAACA                CTGC TTCGC GCAG                GATAACTTTTGCCGG  64 69
   CKO_00722  698549 ..  698567 -  -3.8  -4.40561   GTGGCGGAAAAATAA             CCATAAAG TTT CCATATGG             TACGATTTTTTGAAT  66 97
   CKO_00719  696778 ..  696818 -  -3.9  -3.62644   CCTACAACGACACAA CCGTAGGCCGGGTAAGGCG TCATC CGCC--ACCCGGCATGCCG TTCAGCCTTACACCT  51 33
   CKO_00714  693284 ..  693295 -  -2.2  -3.86822   TAATTCCGGCATAAA                CGAA TAAA TCCG                 GCAGCTGCTTTAAAA  53 93
   CKO_00712  689728 ..  689743 -  -6.1  -3.53444   TGACGCCCGCGCAAA              TCCGC CGTTAT GCGGA               GCGCTGGAAACCCTG  61 90
   CKO_00711 NONE
   CKO_00709  687286 ..  687305 - -11.4  -3.66178   CGCTGGAACGGGAAA            GCCCCTCC CGAG GAAGGGGC             CAAAATAAGGAAAGG  86 203
   CKO_00707  685790 ..  685800 -  -6.8  -3.08679   TGCTCGGAGGTAACA                 CCTG CAT CAGG                 AGCGTACTCCTTTCT  57 21
   CKO_00706  682659 ..  682680 -  -4.4  -3.32354   GCGGTAAATGAAAAG           GGCGAAAA ATTTCA TTTACGCC            TCCTCTTCCTGGCGG  51 19
   CKO_00705 NONE
   CKO_00704 NONE
   CKO_00703 NONE
   CKO_00702  675963 ..  675977 -  -8.5  -5.30616   GCAGGTAAAGAAAAA               CGCCG GATGG CGGCG               TAGCGCCTTCTCTGG 100 104
   CKO_00701  674320 ..  674351 - -11.7  -5.39721   CGATGAGATAAAAAA      TAAGCCTGCGTAA GGGAGA TTACGCAGGCTAA       GGAGGTGGTTCCTGG 100 159
   CKO_00699  673798 ..  673816 -  -8.1  -3.74077   GTTTACAGATGGAAA            CGGGCGGG TTTC CCCGCC-G             TCTGTCAGTAGGTTG  72 30
   CKO_00698  673311 ..  673356 - -22.9  -4.18351   AAAGGAAAGGATAAA GACTCAGCCAAAAAAGCCCCGG TTT CCGGGGCTTTTTTGGCT-ATTC GAGGATGAGTTGCTC 100 20
   CKO_00697  672028 ..  672042 -  -3.5  -4.56597   CTCCGCGCTGAAAAA              GCTGGG CCTG CCC-GC               CGCAGAGTGTCTGGT  69 288
   CKO_00691  666171 ..  666188 -  -6.9  -3.24924   TCGCCAGCCAGAACA             TGGCGCG TTAG CGCGTCA              GCAACCAGCGCGCGG  59 15
   CKO_00689 NONE
   CKO_00688  662366 ..  662388 -  -4.6  -3.14132   CGCGGGGCTGATTAA           CTCCGGCGGC GCG GCGGGCGGCG           AGACCGATCTCAGCG  47 254
   CKO_00686 NONE
   CKO_00685 NONE
   CKO_00684 NONE
   CKO_00683  657926 ..  657976 - -13.3  -3.85539   CAGATGGACAGCAAA GTGCCGGTGCTGGTGATCAAGCA GGTGG CGCTTGACCAGCAACAGCGGCCC ATTGAATACAGCATC  93 59
   CKO_00679  654872 ..  654899 -  -5.6  -4.08216   TCATTTCTCTGAAAA        CGCGTCCTTT TCTGAATG AAAGGACGTG         TTTTGTCTGTTGTTT  66 55
   CKO_00676  650188 ..  650201 -  -5.3  -3.58522   ATTATTACGGGTAAA               GTTGT TGGC ACAAC                ATGTAAATTTGTTGG  55 437
        metG  645914 ..  645932 - -14.6   -5.4505   TTCTGGAATAAAAAA             GCCGGAGA ATG TCTCCGGC             TTTTTGTTTATTTCA 100 33
   CKO_00667  641731 ..  641763 -  -2.5  -4.68908   GGCACGTAAAATAAA      CGTATAGCCAGCGAG CAT CACGCCGCCGATACC      GCCGATAGCCATCAG  63 189
   CKO_00661  633328 ..  633339 -  -3.6  -4.87665   GTTGAGTTACAAAAA                GCAG AAAG CCGC                 GCAGATGGCCGCAGC  75 180
   CKO_00658  630883 ..  630914 - -17.4   -3.6215   TTAATGCAGGCCAAA      TAAGCCTGAAGCGC TAAG GCGCATCAGGCTTA       TTGCGCCGTTTTAAC 100 7
   CKO_00649  622059 ..  622081 - -13.4  -3.12005   TAGACAACGGGAACA           TCGGGCAACG CCC CGTTGCCCGC           GCTAAACCTGCGCCA  83 27
   CKO_00648 NONE
   CKO_00647  620843 ..  620853 -  -6.8  -5.01042   AACTTAAATTAAAAA                 TGCG CGA CGCA                 TCGCAAATTTTAACC  85 35
   CKO_00646 NONE
   CKO_00645 NONE
   CKO_00644  618678 ..  618703 - -13.3  -4.72986   TACCGGCATGAAAAA         GCCCGAAGCAG GCAA CTGTTTCGGGC          TTTTTTGTTTCTGCG 100 43
   CKO_00637 NONE
   CKO_00636  610196 ..  610209 -  -2.3  -3.93237   CCAAACAATGAATAA               TGACG AGAT CGTCT                GGTCGCTCTGCGCGC  54 367
   CKO_00634 NONE
   CKO_00632  607707 ..  607719 -  -2.7  -2.61548   TGTGATTATAATTCA                TCTTC AAT AAAGA                ACAGAAGTGATTCGA  41 3
   CKO_00631  606292 ..  606309 -  -9.1  -4.37013   AATGAAGGATGAAAA             GGAGGGC AGAT ACCCTCC              GTTGTTACGTTATGG  83 58
   CKO_00630  604003 ..  604027 - -13.6  -5.80951   AGGTAAAATAAAAAA          GCCCCGACAT TCATC ATGCCGGGGC          TTTTTGTTGTACTGA 100 43
   CKO_00626  600055 ..  600079 -    -3  -2.89055   TAAACCCGCTATACA          CATTATTC TTCAGGTTT GAATAATG          TCGTGTATTCGAAAA  42 88
   CKO_00625 NONE
   CKO_00624 NONE
   CKO_00623 NONE
   CKO_00622 NONE
   CKO_00621  597388 ..  597405 -  -6.9  -4.08216   TGACCGGGCTGAAAA             TCGCCGC TGGT GTGGCGA              CGGTGGTGATGGCGT  70 470
   CKO_00618  596399 ..  596421 -  -8.4  -4.41348   TCGTGGGGAAAGAAA           GCACGCCA TTCTTGT TGGCGCGC           GTGGCGGAACTGACC  83 78
   CKO_00612  588966 ..  588976 -  -6.8   -3.6715   TCATTGAACTGGAAA                 CGCT CAC AGCG                 CCTTAAACGTCTTTA  66 28
   CKO_00610  587956 ..  587973 - -11.3  -5.24129   GTTGGTCATAAAAAA             GGACAGC CCTG GCTGTCC              TTTTTTGTTGGTGCG 100 55
   CKO_00608  584976 ..  584988 -  -4.7  -3.04443   TCCAGAATAATGATA                TGCCG TAA CGGCT                CGTGCTAATCCTGGC  50 111
   CKO_00607 NONE
   CKO_00606  583166 ..  583205 - -10.9  -2.71101   GCGGGAAATAATCGA CGATCGCCATCAG-GAGTG AGAA CGCTCTCTGATGGCGAT-G  TTAATTGATGTGATT  73 40
         spr  582169 ..  582186 -  -9.1  -5.55698   TAGAACGCAAAAAAA             GCACCGC CGAA GCAGTGC              TTTTTATGTGTCTCG 100 76
   CKO_00602 NONE
   CKO_00601 NONE
   CKO_00600 NONE
   CKO_00599 NONE
   CKO_00598  574383 ..  574398 -  -4.6  -3.69976   AAAATATTTTAATAA              CGGGCT GTAC AGGCCG               CTCAGACCAGGGATG  56 484
   CKO_00596  573791 ..  573805 -  -2.7  -3.18023   TGACCATTATCAACA               GCCGC TTCGT GCGCC               GGGTTGGGGCGTTGA  45 395
   CKO_00592  570219 ..  570248 -  -7.1  -3.90922   ATCTCTCTTAAATAA       TTCCTGTTACAGG CGAC CCAGCAACAGGTA        AGTGATCTGCTTTGC  68 101
   CKO_00591  569877 ..  569892 - -11.8  -5.67063   CGCACCATAAAAAAA              CCCCGC CGTG GCGGGG               TTTTTCTTCAACTTG 100 48
   CKO_00587 NONE
   CKO_00586  566451 ..  566468 -    -7  -5.64274   GCAGGCATAAAAAAA             CCAACC GTAAGA GGTTGG              TTTTTCTAAGGGATT  93 192
   CKO_00584  565263 ..  565296 -  -5.2  -4.62336   ACTGGACCCCAAAAA     TAGCGATGCCGCAT TAGGGT ATGCGGAAGCGCTG      ACCCGTTCTTCCGAT  73 356
   CKO_00580  561278 ..  561291 -  -2.3  -2.65906   GTTAATGGAAAAACG               TCGCC CGTG GGTGA                GTGAACTGATTTTAA  38 110
   CKO_00576  558585 ..  558618 -  -2.9  -3.14211   ACCTGGCGTGATTAA     GCGGGTCTGGCAATG GTGG CGTCGCCCCAGCCGC      CTGGCGATCGGCACG  45 47
   CKO_00567 NONE
   CKO_00566  552237 ..  552254 -  -6.9  -4.15106   GACGAAGCGCCAAAA             CCGCAGC TTAA GCCGCAG              GTTCAACCGCAGCCG  70 175
   CKO_00560  544009 ..  544024 -  -3.2   -4.4648   ACGTTGATTACAAAA              TCAACC TGCT GGATGA               CAATACCTTTACTCG  64 86
   CKO_00557  542551 ..  542569 -   -11   -6.3578   AGGGTAAAAAAAAAA             CCGAATGC GAG GCATCCGG             TTGAAATAGGGGTAA 100 206
   CKO_00554 NONE
   CKO_00553  538804 ..  538833 -  -6.4  -5.24129   CGCGGGCATAAAAAA      GGCCGGA--TGGCG GTTT CGCCTTCTCCGGCC       TACTGCAATCATCAA  85 85
   CKO_00550 NONE
   CKO_00549  532535 ..  532553 -    -6  -3.35798   AGGTGCTATGCAGAA             TTTTGCGC ACT GTGCAAAA             TTCTGCATAGCAACT  56 48
   CKO_00548 NONE
   CKO_00547 NONE
   CKO_00546  529757 ..  529770 -  -2.4  -3.49419   TGCCGTCAGAAAAAG               GTCA AACCGA TGAC                AAAAATGATCCCGGA  47 2
   CKO_00545  528450 ..  528467 -  -8.4   -3.5394   AAATCGTGTGTGAAA             GGAGGC CATTGC GCCTCC              TTTTTTTTGCCGGAT  69 90
   CKO_00542  524854 ..  524870 -  -3.6  -4.07568   GCGCCCCGGGCAAAA              TTGCCG GATAG CGGCAT              AAACGCCTTACCCGG  59 54
   CKO_00541  522133 ..  522168 -  -4.6  -3.21934   CCGGGCCTACAAAAC    CGTAGGCCGGGTAAGCG TAG CGCT-ACCCGGCAAAAA    TAACTTAGATCTTAC  49 30
        nrdB NONE
   CKO_00539  520600 ..  520627 -  -9.9   -4.8269   GATAAGCACTAAAAA       GCCGGGT--GGCG GCTT CGCCTTACCCGGC        CTGTGAACTGCGGAC 100 84
        glpA NONE
   CKO_00535 NONE
        glpC  513834 ..  513847 -  -3.1  -3.17194   ACGCGCTTAACCTAA               TGCCT GGGC AAGCA                GGGTAATCGGATGTT  45 3
   CKO_00531  510136 ..  510157 - -15.9   -3.4052   CCGTAATGTAAGCAA           CACGGGAGC CGCA GCTCCCGTG            GAAACGGTTATTTCG 100 33
   CKO_00522  501134 ..  501145 -  -5.8  -3.58536   AAATGGAGCGTTAAA                CCGT GAAA ACGG                 CGAAATCGTGAGCCA  58 9
   CKO_00521  500019 ..  500032 -  -9.5  -5.42514   GCAGAAACGAAAAAA               CCCGC CGTG GCGGG                TTTTTTTATGCCCTG 100 53
   CKO_00505  481143 ..  481190 -  -7.2  -3.48395   ATTGTGCGCAGAGAA GGCCATCGGATGCAA-ATA CTCGTCTTTCT CACGTTGCATCCGACGGCC AGTTTACGGTTACAG  63 35
   CKO_00504  480466 ..  480477 -  -5.8  -3.30441   CAGTAGGTCGGATAA                GACG TTTA CGTC                 GCCATCCGGCAAAAC  56 44
   CKO_00498  475221 ..  475245 - -15.7  -3.79419   GCGGGTTACAAAACA          GCACCGCCAGC TAG GCTGGCGGTGT          AAAATCAGGCAGTCA 100 30
   CKO_00497  472978 ..  473021 - -12.4  -2.59177   ACCTTAGATATGAAG TGCTGGCCGGATAAGGACGC CTTA GCGTCGCTATCCGGCACACA AAGCAGATTACTGCT  78 33
   CKO_00496  472819 ..  472846 -    -5  -3.22618   TGCGGACATAACACA        CTATCCCTGTTGC AAG GCAA-AGAGATAA        TTATGCGAACAGAGG  52 50
   CKO_00495  471254 ..  471267 -  -8.1  -3.30124   TCGTAGGCCGGATAA               GACGC GCCA GCGTC                GCCATCCGGCATTTT  67 44
   CKO_00488  465645 ..  465657 -  -3.3  -3.97139   GAAGCGGAAGAAGAA                CTGGG TAT CGCAG                GCGTGCCGTTTGCTG  56 294
        folX NONE
   CKO_00483  462521 ..  462567 - -13.8   -4.3898   ATTATCGCCATAAAA TCGCCATTCCAGAAGTCAGGCA TAC TACCTTACCACTGGAATGGCTA CAGTGACCAGGTGAA 100 45
   CKO_00482  461987 ..  462003 -  -9.4   -2.5955   AGGCCGGATAAGGCA              TCGCCG CCATC CGGCGA              TTATCGCCCCATTTC  64 26
   CKO_00476  457472 ..  457490 - -13.2  -3.85698   GCGTTTTTGCACAAA             TTGCCCTG TTT CAGGGCAA             TTTTGTAACCGCGAT  95 63
         flk  446221 ..  446231 -  -2.4  -3.53012   CCCTGTTGGTCGAAA                 CGGC AGG GCTG                 GTGCTGCTTTGGCTG  47 322
   CKO_00463  444499 ..  444510 -  -7.2  -3.28791   ACGTTGGGTGGATAA                GGCG TTTA CGCC                 GCTATCCGACATCAA  59 102
        mnmC  440612 ..  440627 -  -5.4  -4.60487   GAGTACCTGGAAAAA              GGCATT CCTG AACGCC               CGGCCCGGTTTATTA  73 494
   CKO_00454 NONE
   CKO_00453 NONE
   CKO_00451  434454 ..  434466 -  -4.8  -5.46698   CGTAAAAGCAAAAAA                CAGG TCGAC CCTG                CAATTTATAGGCTTA  93 474
   CKO_00446  429135 ..  429154 - -12.2  -5.46657   GAGGCCAATAAAAAA            GGTGAGTC AAAA GACTCACC             TTTTTTTACGTCTGA 100 47
   CKO_00444 NONE
   CKO_00443  426818 ..  426832 -  -4.3  -5.19251   CAAGAGGAATAAAAA               TAAGC GTTCA GCTTA               TACCGTCTGGTGAAT  79 330
   CKO_00440  424610 ..  424627 -  -8.5   -2.7558   GTATATGATAAATAG             TTTCGAC GAAT GTCGAAA              TTTTCGAAGATGTAA  61 495
   CKO_00439  423120 ..  423150 -  -9.8  -5.31275   TCGCAGGATAAAAAA       GCAGGCGAATAC CTTATTC GTATTCGCCTGT       TATTGAATTATTTGC 100 33
   CKO_00432  414736 ..  414760 - -12.2  -2.82834   GACCTCATCAGGACA          GGCGCAATGC GTGGT GCATTACGCC          TGCCGTAAATCAGTT  79 48
   CKO_00431  414430 ..  414443 -  -2.4  -3.29461   TAACGTCTGCGACAA               CATG TTGTGT CATG                AGCGTTTCTCCTCTG  43 21
   CKO_00430 NONE
   CKO_00429  411940 ..  411974 - -15.2   -2.9176   AACTTTATCGATATA     TCATGCGCATATTACC CGG AGTAATATGCGCATGT     ATATATCAGGACTTA  93 149
   CKO_00425  402282 ..  402299 -  -2.1  -3.94936   AATTAAGACATTAAA             TAATC-GA TGT TCAGATTA             CCCCATCAAATAAAT  54 23
   CKO_00423 NONE
   CKO_00422  400363 ..  400382 - -13.6  -4.28487   GAGTAGAAAAGCAAA            CAGGAGCC ATCT GGCTCCTG             TTTTTTGCTGCATCT 100 499
   CKO_00420  397033 ..  397045 -  -3.4  -3.53224   CATCTCCGGGTTAAA                GCAA TAACG TTGC                CGGTGCGGCGGCAGG  51 8
   CKO_00419 NONE
   CKO_00418  395383 ..  395394 -  -7.2  -3.30124   GCGTAGGCCGGATAA                GGCG TTTA CGCC                 GCCATCCGGCGGTTA  61 38
   CKO_00411  385770 ..  385790 - -15.4  -3.09516   TTGCCGATCAGGGAA            CCGCCGCG TTTGG CGCGGCGG            ATCTTTCACTGCCTG  91 524
   CKO_00408  383366 ..  383383 -  -9.8  -2.77791   GTTAACGCAATATTA             CGGGGC GGTAAA GCCCCG              TTTCATCGCCTTAAC  64 81
   CKO_00405  382969 ..  382990 - -14.5   -4.2361   AACACAATTCGAAAA           TAGCCCCGT TTGA ACGGGGCTA            TTTTTAATGACGGTG 100 29
   CKO_00403 NONE
   CKO_00402  380047 ..  380065 - -11.7  -5.65177   ACAGCTATAAAAAAA             CCGGGGA ACATG TCCCCGG             TTGCGCGTCGTAAGG 100 82
   CKO_00398 NONE
   CKO_00397  376401 ..  376441 -   -11  -3.16921   AGTAAGGTGTATTAA  CCGTAGGCCGGATGGGGG TTGCG CCGCCATCCGGCCTGTTG  CCCGATGGCGCTGCG  77 51
   CKO_00388  370509 ..  370527 -  -2.2  -2.55015   AGGCCAGTGAACTTA             CCGCTGGC CGT GCACGCGA             TCCGTTGTATCAGAT  39 35
   CKO_00386  369524 ..  369536 -  -2.7  -4.93316   CAAGAATACGAAAAA                GTTTC ATA AAAAC                TCCTGAAAGTCGATG  72 16
   CKO_00384  368286 ..  368300 -  -7.8  -3.18582   GACGTGATCGACGAA               GCAGAG ATG CTCCGC               CTACTGGGTGTCTGA  62 257
   CKO_00380  364150 ..  364169 -  -9.2  -3.67775   ACCTGGATGGAATAA            GGAGCGGC ATAA GCCCCTCC             TTTTTTATACAACTA  76 69
   CKO_00379  363009 ..  363024 - -10.4  -5.26316   GCAGGCCACAAAAAA              GCACCC AAAA GGGTGC               TTTTTTACGCGTTTT 100 54
   CKO_00377  362400 ..  362423 -  -4.5  -4.11692   GACTGATTTTTAAAA          GAACCCGGG AACTTA CTCGAGTTC           CGCCATCAGTTTGAC  61 14
   CKO_00376 NONE
   CKO_00375 NONE
   CKO_00374  359585 ..  359620 -  -3.3  -3.60098   ATTGTGCAGGGGAAA   GCGCTGACGGCGGCGACG CGA CAT-GCCGCAG--AGCGC   GTGCTGGAGGTGATG  49 323
   CKO_00371 NONE
   CKO_00370  356653 ..  356701 - -18.4  -3.30124   CTGTAGGCCTGATAA GCGTAGCGCCATCCGGCAACCGTA AAG TACGATCGCCGGATGACG--ACGC AAAGCGTCTTATCCG 100 51
   CKO_00362 NONE
   CKO_00361 NONE
        murQ NONE
        murP NONE
   CKO_00357  343858 ..  343878 -  -6.8  -4.00042   GGTCGTACTAAAGAA            GCCAACGA AGAGA TCGATGGC            GATGACCGTCCGGTC  68 401
   CKO_00351 NONE
   CKO_00350  339522 ..  339554 -  -9.7  -4.56597   CTGTTTGCCGAAAAA      CCGTCGCTGACGCTG CAT CAGCGTATGCGTCAG      TGGATGTGATGACAT  93 154
   CKO_00331 NONE
   CKO_00330 NONE
   CKO_00329  318961 ..  318973 -  -9.1  -3.30124   TTGTAGGCCGGATAA                GACGC ATC GCGTC                GCCATCCGGCTTCCG  70 57
   CKO_00324 NONE
   CKO_00323 NONE
   CKO_00322 NONE
   CKO_00321 NONE
   CKO_00320 NONE
   CKO_00319  309842 ..  309862 - -11.9  -5.25772   AAAGGATAAGAAAAA            GGCGACTCA AAG TAAGTCGCC            TTTTTTGTGTCTTAT 100 37
   CKO_00318  309480 ..  309496 -  -5.1  -2.77947   TAATAATTCTGAAAT              GTTGCTT AAT AAGCATC              TCATCGGGAAGTATA  49 177
   CKO_00317 NONE
   CKO_00316  307839 ..  307854 -  -4.6  -3.19602   CCTCTTACAGGAACA              CGCGTC AGGC GACGAG               TTGTTCCATGATACG  49 14
   CKO_00315  307523 ..  307562 - -11.4  -3.18199   TAAGCCGGAACTGAA  CCGTAGGCCGGATAG-GGC GAA GCCGCCATCCGGCATTCAG  ACGGTATGTTGCCTG  77 78
   CKO_00308 NONE
         bcp  299582 ..  299626 - -13.6  -3.10244   CGTTTGAATAAACGA CGCGTATGCCGGATGGCGGCG TAAA CGCCTT-ATCCGGCATACGGG GTTGTGCGAATCAGG  85 92
   CKO_00302  294319 ..  294338 -  -2.8  -4.36914   GTCGGCCGGATAAAA            CGCGATAGC GTC GCCACC-CG            GCAACAGAACGAATA  60 41
   CKO_00301  293702 ..  293717 -  -4.6  -4.65895   GCCCGCAGCTAAAAA              CGCACC TGGC GACGCG               CGGTATGTCATGCCA  71 230
   CKO_00299 NONE
   CKO_00298 NONE
   CKO_00297  290547 ..  290558 -  -7.2  -2.78463   ATTTCCGCGAGCAGA                GCGG AATC CCGC                 AATAACGAACAGCCA  56 105
   CKO_00296  288956 ..  288966 -  -2.4  -3.47349   GGGGCAAATCTACAA                 GCTG CAA CCGC                 TCTCTGATGAAGACA  47 270
   CKO_00291  283426 ..  283437 -    -3  -3.31133   ATAAGCACCACAAGA                TTCA TCAT TGAA                 TAACCACGCGCTGTT  47 18
        purN NONE
   CKO_00288 NONE
   CKO_00287 NONE
   CKO_00286  278927 ..  278957 -  -5.3  -3.03124   GGCGACTCTGGAAGA       GGTACAGGCACCA TTGTC TGGTGCCTGAGGC       GAAATTACGCCGCGA  50 30
   CKO_00283  275995 ..  276033 -  -4.5  -2.73771   GCAGGATATACAGCA   GTTGTTGTTCAGGCGTC TGATT GCCGCCTGAACAATCAG   GCGACGATACCGCTT  45 153
        xseA  270173 ..  270217 - -10.1  -3.06133   TAACGCCTGATGCAA CATCCGATCTGGCCGGGGCGT GAGTG ACGCCCCGG-CAGTTCA-ACG AACGAGACGGGAACA  70 318
   CKO_00266  258639 ..  258665 -  -3.5  -4.24963   GATAATGACGGAAAA         CGCGTCGCCGC CGATT GCGCCCAGGCG         CGGGAGCAGACGTTG  64 480
   CKO_00264  256436 ..  256446 -  -6.8  -4.11216   TCTGGAGCTGGAAAA                 CCAG AAC CTGG                 CAAACAGCAGCGCCA  71 210
        sseA  250626 ..  250648 -  -4.8  -3.59979   CTGCGCGATTTCAAA           CAGAATCGGA TTA TCTGATCCCG           GTAGCCGGATGGCGT  56 111
   CKO_00259  248261 ..  248273 -  -4.7  -2.73771   TGATAGCCGCGAAAT                CGGCG AGG CGCTG                TACGACGCGTTCCCC  47 79
   CKO_00248  240581 ..  240596 -  -3.2  -4.65747   TAAGCGGCAATAAAA              CGCC GGTATTGT GGCG               GCAAGTGGGATGGAC  67 242
   CKO_00245 NONE
   CKO_00244 NONE
   CKO_00238  229388 ..  229405 - -11.3  -4.59773   TGGCATCGTGAAAAA             GGCTTCC TGCG GGAAGCC              TTTTTTATTTCCGGG  95 167
   CKO_00236  227814 ..  227828 -  -2.9  -2.74563   CTGAGACTTTAATGA               TGTAT GTCAA ATACA               TCTTATAAAAAATAA  41 28
   CKO_00235  226481 ..  226505 - -14.3  -3.39288   TACCGGCGAAGAAGA          CGACGCGGC AATTTAA GCCGCGTCG          TGCTTGCCGGATGGC  93 113
   CKO_00229  221806 ..  221836 -  -9.6  -3.37796   CGTTACCACGGAGAA       CGGTCGCGCCACCA TTA TGATGCCGCACCCG       GAGCGCGTCTTCCGC  73 127
   CKO_00228  220561 ..  220573 -  -6.9  -3.31144   GGGTCAGGGGCATAA                CGCGC TGG GCGCA                ACGGCGCTGGCGCAG  61 368
   CKO_00227 NONE
   CKO_00225  216182 ..  216192 -    -4   -5.4477   AAAGCGCTAAAAAAA                 TCTT CGC AAGA                 ATCGTTGTAGGGCGG  83 72
   CKO_00221 NONE
   CKO_00220  212681 ..  212692 -  -7.2  -3.30124   TTGTAGGCCGGATAA                GGCG TTTA CGCC                 GCCATCCGGCCTGGC  61 60
   CKO_00208  200714 ..  200732 -  -5.9  -2.56271   GGCGCAGGAGAATAT             CGCCCAC TCACC GTGGCCG             CAGCGGATAACGGTG  49 463
   CKO_00206  198955 ..  198973 - -13.1   -5.1523   CTGATAACATAAAAA             CGCCGGG TTAGC CCCGGCG             TTTTTTTACTCTTCG 100 31
   CKO_00204  197378 ..  197395 -  -2.7  -3.70568   CAGAATAAAGCATAA             TCAGG TGTAAGTG CCTGA              TGGCGCTGCGCTTAT  52 172
   CKO_00202  195676 ..  195696 - -14.7  -4.16943   TCGCAGAGGTGAAAA            CGGGGCACA AGA TGCGCCCCG            TGGAGATTACAGCGA 100 32
   CKO_00201 NONE
   CKO_00200  192184 ..  192208 -  -3.5  -2.74269   TGCAGACGACATAAG          CGAGCAATGAT AAC ACCAGTACCCG          TTAAAGTGGTCAACA  43 56
        pssA  190741 ..  190759 - -11.7   -4.8048   CCCTCACAGGAAAAA             CCCCGTC GCAGG GACGGGG             CTTTTTGATTTACAG 100 35
   CKO_00198  190020 ..  190030 -  -2.4  -2.58418   CTCTCAGATAAAATC                 GGCC GAC GGAC                 ATCAATGCTCTGCTT  38 392
   CKO_00189 NONE
        fadB NONE
        fadA NONE
   CKO_00186  175640 ..  175654 -  -7.1  -3.02461   TAACGCGCGGGAAGA               TCGCC TGTTT GGCGA               TGCGTTTGCCTTTAT  57 37
        rfaH  172569 ..  172593 -  -4.3  -3.57462   GATCTCACGCCTAAA         CCGGCTTCGC GGCGTA ACGAA-CCGG          CGCATCTGGCGCACA  52 146
   CKO_00175  164581 ..  164597 -  -6.5  -3.11162   ATGCAACAAATCACA              TTGCCTG AAA CAGGCTA              TCTTTTGTGCAATGG  55 247
   CKO_00172  163584 ..  163603 -  -8.6  -2.76315   CGAACATGGTTAAAG            CTG-CGCAG AAT CTGCGTCAG            GCATAATTCGCTGCT  62 128
   CKO_00170  160124 ..  160138 -  -4.9  -3.14931   GCGATCTGGCATCAA               CAGCC CCACT GGCCG               AGTTTTATTACAGGC  52 33
   CKO_00169  158946 ..  158963 -  -2.7  -4.72986   GATGCGCATGAAAAA             CTACTGCC GCT GG-AGCAG             GCGATTAACGCACGT  70 427
        rhtB NONE
   CKO_00164  156335 ..  156353 -  -3.1  -5.40072   GGCGCGCTAAAAAAA            CAGG-ACG TCGC CGCGCCTG             CGCCGCAGATTGAAC  84 336
   CKO_00159 NONE
   CKO_00158  151606 ..  151620 -  -9.2   -2.5955   AGGCCGGATAAGCGA               CGCGCC ACC GGCACG               CTTTTATCCTCGAAC  64 29
   CKO_00156  149803 ..  149815 -  -9.1  -3.08679   CGTCGGCATGGAAGA                GGGGA TGT TCCCC                AGCCAGATGTCGCTG  63 402
        cyaY  143660 ..  143680 -  -3.9  -4.30987   ATTTCGCACAACAAA            CTTCACGGA CTT TCCGTTCAG            GTTGAGACCAACCAT  64 489
        hemC NONE
        hemD NONE
   CKO_00145  138226 ..  138254 -  -2.5   -4.3587   GATCAACAACACAAA        GAGCAATAATACT TTC AGCATCATTATTC        TCCTTGCGGCGCGGC  58 20
   CKO_00144  136650 ..  136666 -  -5.7  -3.86822   GAAGGCTGGCAGAAA              CCGCCGC AGA GCCGCGA              ATGGCCTGATACGTT  63 409
   CKO_00122  117944 ..  117957 -  -2.4  -2.71447   AGTGAGCATATATTA               CGTT AACCTG AACG                ACGACGATTACGCGG  39 14
   CKO_00121  116226 ..  116241 -  -4.6  -2.60615   ACGCTGTGCAAAGAG              CGTCGT CAGT ACGGCG               AACTGGTGCGCCCGG  44 237
   CKO_00116  111578 ..  111600 -   -12   -5.1101   CCATCAGGCAAAAAA           GCCCGGAG TATGAAC CTCCGGGC           TTTTTATTAGTTGCG 100 32
   CKO_00112  108935 ..  108946 -  -7.2  -3.30124   CCGTAGGCCGGATAA                GGCG CTTG CGCC                 GCCATCCGGCTAGTG  61 35
   CKO_00105  100417 ..  100429 -  -6.2  -5.84381   CGATTAATAAAAAAA                GGGC GAAAT GCCC                TTTTTTTACGTCAGT 100 31
   CKO_00103   99023 ..   99042 - -10.8   -3.1733   CCTGCCAGAAAATTA            TCCTTAGC ATTT GCTAAGGA             TTTTTTTTGCCTGAA  74 101
   CKO_00095 NONE
   CKO_00094   90926 ..   90937 -  -7.2  -4.06419   CTGTCCCATAAACAA                CGCC CACA GGCG                 GTATTTGCCGGCAAT  71 261
   CKO_00086 NONE
        yieM   79583 ..   79596 -  -3.7  -3.60296   GATCTGGATGCGAAA               GGGCG CGAA CGCGC                GATCGCGAAAGAGCT  51 460
   CKO_00083   78419 ..   78430 -  -7.2  -5.14563   TGTGGGATTAAAAAA                GCCG ATCA CGGC                 CGGATAGTACGCATG  87 19
   CKO_00082   77710 ..   77724 -  -7.2  -3.38991   ATCCGTTGAATAAGA               TCAACA AGT TGTTGA               GGATCATTAGCTGTG  61 187
   CKO_00081   75547 ..   75572 -  -8.9  -3.04089   TGTTAATAATCAAAT         GCCCGATGCGC TTTC GCTTATCGGGC          CTACAAATTTGTAGG  67 77
        gidB   74773 ..   74785 -  -7.7  -4.16307   TTTTTAATAAAAAGA                GCTAC GTT GTAGC                AATGATACAAAACGG  73 138
   CKO_00079 NONE
   CKO_00078 NONE
   CKO_00077   72785 ..   72797 -  -3.3   -3.4052   TCTTAATTCAAGCAA                CGCTT ACT ACGCG                ACAGCGAACATCACG  49 19
   CKO_00076 NONE
   CKO_00075 NONE
   CKO_00073 NONE
   CKO_00071 NONE
   CKO_00070 NONE
        atpC   67354 ..   67373 -   -10  -6.11644   TCAGGCAAAAAAAAA            CCAGCCTG ATTT CAGACTGG             TTTTGATGCTTTCAA 100 48
        glmU   65692 ..   65737 -  -6.3  -3.80625   GCCGGATAAGGCAAA GCCGCCATCCGGC-AAAAAGA CTTACT TCTTCTTCGCCGGAC-GCTGC CAGCCCTGCTTATGC  64 1
   CKO_00066   63490 ..   63509 - -11.4    -5.626   CAGCGCAGAAAAAAA            TGCCCCGC TTTC GCAGGGCA             TCGTCACGATTACTC 100 35
   CKO_00065   62089 ..   62118 -  -9.3  -3.86015   TATCCGGCCTACAAA       TCGGGCCTACAGT CGGA ACTGTAGGGCGGA        TAAGCGTAGCGCCAT  77 66
        pstC NONE
        pstA   60135 ..   60146 -  -7.2  -3.50393   CTGTAGGCCAGATAA                GGCG TTTA CGCC                 GCCATCCGGCACCTG  63 44
        pstB NONE
   CKO_00061   58468 ..   58496 - -14.5  -2.58579   CGAATGGCGCAGAAT        GCCGGATGCGGCG TAA CGCCTTATCCGGC        CCACAATAGCGACGC  86 71
   CKO_00059 NONE
   CKO_00058   55888 ..   55907 -    -5  -3.55444   CCGTTAGCCGGGAAA            CCGGTGCTG ATC CAG-ACCAG            CTCAATGGGGGCAAT  55 227
   CKO_00049   48022 ..   48033 -  -2.2  -3.54741   CAGGATCCGTTGAAA                CGAT CAGG ACCG                 CGGATCATAGCCTAA  47 129
   CKO_00048 NONE
   CKO_00047 NONE
        recF NONE
        gyrB   41722 ..   41739 -  -7.7  -4.05322   AAAGGGGGATAGAAA             GGGGAAC CAGG ATTCCCC              TTTTGCAGATCGGTT  73 139
   CKO_00044   40710 ..   40763 - -11.1  -2.78992   ATTGATTTGAATAAG TCG-TGATCGGACCGTTCCCCCGTC AAACTG GCCGGGGGAACGG-CAAACCAGCGA AGTACTGTAGTCCGC  74 91
   CKO_00043   39255 ..   39271 -  -5.1  -3.62957   CGCAATAATCAAACA              GGATTTG CCG CAGATCC              CAACGATTATCGATC  58 134
   CKO_00038   33570 ..   33582 -  -6.2  -3.34715   TACCGGCGGCAAAGA                GGGG ACCTA CCCC                GGCACACGCGCCAGC  59 252
   CKO_00037   33289 ..   33299 -    -4   -3.5394   AAATGGGTCTGGAAA                 TGAA CTT TTCA                 AGCGCTTGCAGGGGA  51 155
   CKO_00034   32728 ..   32748 - -14.7  -3.31792   CGAGCACGGGGATAA            CAGGCCGCC GAC GGCGACCTG            ACTGAATCAGTTAAT  93 32
   CKO_00033   32064 ..   32087 -    -8  -5.04325   GGTAAAGCACAAAAA          TGCCCCGTCA TTGC TGGCGGGGCG           GTTTGTTGAAAAGCA  95 152
   CKO_00031   29819 ..   29842 -  -4.5  -3.78953   ACGTTCATCATGAAA          CCACCAACC TGACCG GACTGGCGG           AAGTGCTGCGGCGTC  58 501
   CKO_00029 NONE
   CKO_00028   26400 ..   26436 - -13.7  -3.53012   TCGGCGGTGTTGAAA    CATCCTGACCGGCACCC GCT GGATGCCGGTCAACAAG    ATTAGTGCAGTTCAG  93 27
   CKO_00026 NONE
   CKO_00025 NONE
   CKO_00024 NONE
   CKO_00023 NONE
   CKO_00022   19979 ..   19991 -  -4.8  -3.17075   GGGCGGGCAATGGAA                CGTC TGCTG GACG                GGCTGTACACCCTCG  49 292
   CKO_00019 NONE
   CKO_00018   14949 ..   14962 -  -4.5  -3.61398   TGGTCGCCCGAATAA               GCGCT TCGC AACGC                TGATGTGGCAGTCGG  53 320
   CKO_00014   12471 ..   12486 -  -8.2  -5.79595   CTGCAAAACAAAAAA              CCCCGC CGGA GCGAGG               TTTTTATCAGCGTTA 100 378
   CKO_00013 NONE
   CKO_00011   10095 ..   10122 -   -15  -3.61652   CTCTCAAATAATTAA        CCTGAACAAGGG TTTC CCCTTGTTCAGA         TAGCCATTATTACTC 100 35
   CKO_00010 NONE
   CKO_00009    8801 ..    8823 -  -9.9  -4.20516   CGGCCATCCAACAAA           GCGCTTACC TTAAC GATAAGCGC           ATGGCTGTTCAAGCC  87 81
   CKO_00008    8109 ..    8129 -  -2.5  -3.62478   TAATTAACCGGGAAA            GGATGGT TTTCATC ACCAGCC            ATCAAACATGCGGCG  47 17
   CKO_00007 NONE
   CKO_00006    5206 ..    5225 -  -8.6  -2.71364   TCAGTCGCCCAACCA            GCCTGAGAC AGC GTC-CAGGC            GAAACCGGGAAAATT  61 81
        uhpT    3706 ..    3724 - -13.1  -5.52023   AGCAGCAATAAAAAA             GCCCGGC GCCAG GCCGGGC             AAAACGTTACCAATA 100 46
