   pCM2_0001    1784 ..    1803 +  -4.3  -3.14051   CGACGTCGAACGTCT            GCGG-TGT GAAGA ACAGCCGC            TGTTCCTCGGAGTCC  45 270
   pCM2_0003    3357 ..    3385 +  -7.4  -3.14132   GCCGGTCCAACAGGG       CCGGCCGG-G-AGG GCT CCTGCTCCGGCCGC       TTCATGCGCAACCAC  54 53
   pCM2_0004    3973 ..    3987 +  -4.2   -3.4252   TGCCAGTAAGAATCT               CTTCTC AAG GAGACG               TTGTGATGGATACGC  49 32
         ssb NONE
   pCM2_0006 NONE
   pCM2_0007 NONE
   pCM2_0008    7125 ..    7139 +    -7  -3.01712   GTCGTGCTGCCGCGC               CCACGC TTC GCGCGG               TCTTGCCGACGACGA  51 101
   pCM2_0009    7885 ..    7914 +  -5.6  -2.52676   GGTCTCGGTGGGCGC       CTTCGCGACGTC CCGAAC GGCGACGCCAAG        TCGCTTGGCGACCTC  42 157
   pCM2_0011 NONE
   pCM2_0012 NONE
        traA   13797 ..   13832 + -23.4  -2.62983   CTGACCCGCGCACGA    TGAAGGCCGGGCACCT CATC GGGTGCCCGGCCTTCG     TCGTGTGCGGGTCAG 100 37
   pCM2_0018   19630 ..   19640 +  -4.6  -3.65514   GGGCGGCGTTGAAGC                 TCGC GAC GCGG                 TTGATTTCCTTTGAA  54 445
   pCM2_0032   31865 ..   31886 +  -2.9  -4.26463   AGACGAAATGAAAGA           CTGCAAGAC ATAC GTCTGTCAG            TTTGTCTTGCTGTAT  63 242
        parA   33131 ..   33168 +  -8.3  -3.59979   GCCCACCCCAAGGCT   CGCCCCCGGCCCT TCTCTCTCTCTT CCGGCCGGGGGCG    TTTGGCGTCCGCGCA  62 449
   pCM2_0038   41432 ..   41445 +  -2.3  -3.60597   CCGGAAGCCATTGGT               CACGA ACCT TCGCG                TCTTTATGGCTTTGT  48 115
   pCM2_0039   42480 ..   42491 +  -5.8  -4.63586   CGGTTTGACTGGCGA                GCAG CTGC CTGC                 TTTTATATGTCGTAT  77 154
   pCM2_0041   44271 ..   44293 +  -3.2  -2.70932   GATAGACCGCGCGCG           TCATGCCGCC AAG GGTGGCCCGG           TACTTGACGCGGAGC  40 410
   pCM2_0042   45463 ..   45486 + -18.2  -2.71011   GGTGGATTGCCAGCA          GGGACGCTGC ACGC GCAGCGTCCC           TGCTTCCGCGAGCAT  78 355
   pCM2_0044 NONE
   pCM2_0045 NONE
   pCM2_0046   47477 ..   47499 +  -3.3  -3.76641   CGCAGCCGACAAGCC           GGGCGCG CAGGTGACC CGCGACC           TTTGCATGTTGACCT  56 360
   pCM2_0049   50546 ..   50557 +  -5.8  -3.02144   CAACCACTTCCTGCT                CGAC GGCT GTCG                 TATTCCGGGCACTGG  47 244
   pCM2_0050   51108 ..   51131 +  -3.8  -3.53444   CCGCGGGGTCGTCTG          CGATCGGTTCG AAC CGGACC-ACCG          TTTCGCAGAAGGTGA  51 324
        phpA   54420 ..   54435 +  -6.8  -3.89822   CCCGGACCACGACGG              CGAGGT GACG GCCTCG               TTTATGGACTCCATG  66 147
       pat-1   56694 ..   56751 + -27.1   -2.6155   TTGCCGGTTGCCGGT TGCTCGGGTGCCCGGGTGCCCGGG-TCC TCG GGAGCCCGTGTACACGGGCACCCGAGGA CTTAATGTTCGACGC 100 506
   pCM2_0059 NONE
   pCM2_0060   65266 ..   65297 + -19.4    -3.494   GGGATAGCACCTCAA      GAGCGGCCGGCACC TTCG GGCGTCGGCCGCTC       TTCTCTGCCGCCTTC 100 34
   pCM2_0061   66499 ..   66538 +  -8.4  -2.80016   GGTGCCGGGGATGAG  CG-CGAGCTCACCGCGCTC GGC GCGCACAGCGAGCTCGTCG  TAGTTGGTCATGCCC  52 214
   pCM2_0064 NONE
   pCM2_0065 NONE
   pCM2_0066   68973 ..   68993 +  -7.5  -3.14132   CCACCGGCGCCCGAA            GCCGTAGAT GAC GTCGACGGC            TTCCTCGCCGCGGAC  53 266
   pCM2_0069 NONE
   pCM2_0068 NONE
   pCM2_0067 NONE
   pCM2_0063 NONE
   pCM2_0062   66135 ..   66154 -  -4.9  -2.74741   AGGAGATCCGAATCA            TGGCGCG GGACTG CGCGGCA             GTCGTTCTCGACGTT  43 235
   pCM2_0058   63892 ..   63904 -  -3.3  -2.66249   GGTCAGGAAGAAGAC                CTTGG AAC CCCAG                CCGGACGACTGGATC  39 57
   pCM2_0057   62902 ..   62943 -  -4.9  -3.59979   GGCCTCGATCTCAAA GGGCGGCGTCGGC-CGCGGA GCT TCCGCCCGCCGACGAGGCGG GAAGACTGGCGCCTC  52 298
   pCM2_0056 NONE
   pCM2_0055   60502 ..   60517 -  -3.2  -3.61894   AACCGCCTTCAACAA              CTGCGCG CGT CACGC-G              TCCTCGCGAGGATCT  49 19
        phpB NONE
   pCM2_0051 NONE
   pCM2_0048   48618 ..   48633 -  -4.6  -3.31144   GCCGGAGGCCTAGAA              GCGTCG TCCA CGAGGC               CCCTTCTACAGAACA  49 281
   pCM2_0047   47586 ..   47626 -  -8.8  -4.15222   AGCCCGTCCAACAAA  GTAGTACCGGCGTGGGTG TGCGC CGCCCCCACCGGTTCAAC  GGGCCATGCGACCTC  72 169
   pCM2_0043   45091 ..   45107 -  -2.2  -3.30441   CAGTACGGGTCACAA              CTGGAT GGTCT ATCCCG              GTTCCCCGCCCGTGC  45 219
   pCM2_0040   42652 ..   42664 -  -2.7  -3.83026   GTCGCTGATACTAAA                TAAAG AAA CTCTA                GCTATTAAGGTGAAG  56 45
   pCM2_0037 NONE
   pCM2_0036   39059 ..   39101 - -23.7  -3.18582   CAGCTGACCCACCAA CG-ATGAGAGGG-CCGACCCG TGC CGGGTCGGGCCCTCTCATGCG TACAGCTCGCTCTAG 100 37
        rhsA   33776 ..   33816 - -32.1  -3.62522   CAACTGGCCGAACAA  CAAGAACAGCCCGCGCGCC GAC GGCGCACGGGCTGTTCTTG  TTACATGACCGAGTT 100 210
   pCM2_0034   33022 ..   33041 -  -2.8  -4.56597   GGCGTCGTCGAAAAA            GCGATCCGT GAC ACGTA-CGC            CGACCTATACGGCAG  69 324
   pCM2_0031   28970 ..   28990 -  -3.1   -3.3993   GATCCACCCAAAAAC            GCTAGCAGG CGC CTTGCCCGC            AGTCTGTGTTGCAAA  48 363
   pCM2_0030   28056 ..   28066 -  -2.4  -3.81488   CTGCCTCAAATAGAA                 CGCC TGT GGTG                 GCACGCAAGGTAGTG  54 243
   pCM2_0029 NONE
   pCM2_0028   25638 ..   25657 -  -7.2   -3.4678   ATGCTCATACGAGAA            GTGTTGCA GACC TACAACAC             GTGACGCAAGCGTGC  56 54
   pCM2_0027 NONE
   pCM2_0026 NONE
   pCM2_0025 NONE
   pCM2_0024 NONE
   pCM2_0023 NONE
   pCM2_0022 NONE
   pCM2_0021 NONE
   pCM2_0017 NONE
   pCM2_0016   16169 ..   16198 - -12.9  -2.57132   CTTCTGCCCCAGAAC       CGCGACAGAGGCGA CGA TCGCTTC-GTCGCG       CTCCTGGCGGGCCCT  67 477
        traG NONE
   pCM2_0014   13801 ..   13828 - -19.9  -3.21099   CCCGCGCACGATGAA        GGCCGGGCACC TCATCG GGTGCCCGGCC         TTCGTCGTGTGCGGG 100 41
   pCM2_0010    7600 ..    7651 -    -4  -2.73364   CCGCCACGTCAACCA GTGGACCGCCGTGCACTACCGGGGG CTC CCCCGGGCCGAGCGCGTCCG-CCGC TCGCGCGAACTCCGC  40 148
   pCM2_0002    1370 ..    1392 - -18.4  -2.82015   TCGACACCGACGAGA           CGCGCCGCGC CGT GCGCGACGCG           GACGACGATGCCGAG  81 334
