Clo1100_0013	PWY-5669	phosphatidylethanolamine biosynthesis I
Clo1100_0021	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Clo1100_0021	PWY-2161	folate polyglutamylation
Clo1100_0021	PWY-2201	folate transformations I
Clo1100_0021	PWY-3841	folate transformations II
Clo1100_0025	PWY-7560	methylerythritol phosphate pathway II
Clo1100_0033	PWY-6012	acyl carrier protein metabolism I
Clo1100_0033	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Clo1100_0037	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clo1100_0037	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Clo1100_0037	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Clo1100_0037	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clo1100_0061	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
Clo1100_0061	PWY-622	starch biosynthesis
Clo1100_0073	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
Clo1100_0079	PWY-6599	guanine and guanosine salvage II
Clo1100_0079	PWY-6609	adenine and adenosine salvage III
Clo1100_0079	PWY-6610	adenine and adenosine salvage IV
Clo1100_0079	PWY-6620	guanine and guanosine salvage
Clo1100_0083	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Clo1100_0083	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Clo1100_0124	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Clo1100_0129	PWY-7052	cyanophycin metabolism
Clo1100_0130	PWY-7052	cyanophycin metabolism
Clo1100_0132	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
Clo1100_0132	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
Clo1100_0134	PWY-3961	phosphopantothenate biosynthesis II
Clo1100_0135	PWY-5481	pyruvate fermentation to lactate
Clo1100_0135	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_0138	PWY-7242	D-fructuronate degradation
Clo1100_0158	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_0159	PWY-6807	xyloglucan degradation II (exoglucanase)
Clo1100_0161	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Clo1100_0161	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clo1100_0161	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_0161	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Clo1100_0161	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Clo1100_0161	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clo1100_0192	PWY-6527	stachyose degradation
Clo1100_0221	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clo1100_0227	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
Clo1100_0227	PWY-7248	pectin degradation III
Clo1100_0237	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_0237	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_0237	PWY-6886	1-butanol autotrophic biosynthesis
Clo1100_0237	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_0237	PWY-7003	glycerol degradation to butanol
Clo1100_0253	PWY-6788	cellulose degradation II (fungi)
Clo1100_0270	PWY-1281	sulfoacetaldehyde degradation I
Clo1100_0270	PWY-5482	pyruvate fermentation to acetate II
Clo1100_0270	PWY-5485	pyruvate fermentation to acetate IV
Clo1100_0270	PWY-5497	purine nucleobases degradation II (anaerobic)
Clo1100_0270	PWY-6637	sulfolactate degradation II
Clo1100_0282	PWY-7183	pyrimidine nucleobases salvage I
Clo1100_0283	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clo1100_0284	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clo1100_0284	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Clo1100_0284	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clo1100_0284	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
Clo1100_0292	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_0294	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_0306	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_0306	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_0309	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_0309	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_0317	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
Clo1100_0317	PWY-7177	UTP and CTP dephosphorylation II
Clo1100_0317	PWY-7185	UTP and CTP dephosphorylation I
Clo1100_0328	PWY-5101	L-isoleucine biosynthesis II
Clo1100_0328	PWY-5103	L-isoleucine biosynthesis III
Clo1100_0328	PWY-5104	L-isoleucine biosynthesis IV
Clo1100_0328	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clo1100_0329	PWY-5101	L-isoleucine biosynthesis II
Clo1100_0329	PWY-5103	L-isoleucine biosynthesis III
Clo1100_0329	PWY-5104	L-isoleucine biosynthesis IV
Clo1100_0329	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Clo1100_0329	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Clo1100_0329	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Clo1100_0329	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clo1100_0359	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_0364	PWY-5767	Clo1100_0364|Clo1100_0364|YP_005146455.1|GeneID:11723548
Clo1100_0370	PWY-7560	methylerythritol phosphate pathway II
Clo1100_0372	PWY-7560	methylerythritol phosphate pathway II
Clo1100_0376	PWY-6749	CMP-legionaminate biosynthesis I
Clo1100_0395	PWY-3821	galactose degradation III
Clo1100_0395	PWY-6317	galactose degradation I (Leloir pathway)
Clo1100_0395	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Clo1100_0395	PWY-6527	stachyose degradation
Clo1100_0395	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Clo1100_0395	PWY-7344	UDP-D-galactose biosynthesis
Clo1100_0400	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_0402	PWY-3121	linamarin degradation
Clo1100_0402	PWY-5176	coumarin biosynthesis (via 2-coumarate)
Clo1100_0402	PWY-6002	lotaustralin degradation
Clo1100_0402	PWY-6788	cellulose degradation II (fungi)
Clo1100_0402	PWY-7089	taxiphyllin bioactivation
Clo1100_0402	PWY-7091	linustatin bioactivation
Clo1100_0402	PWY-7092	neolinustatin bioactivation
Clo1100_0413	PWY-6123	inosine-5'-phosphate biosynthesis I
Clo1100_0413	PWY-6124	inosine-5'-phosphate biosynthesis II
Clo1100_0413	PWY-7234	inosine-5'-phosphate biosynthesis III
Clo1100_0422	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Clo1100_0422	PWY-6596	adenosine nucleotides degradation I
Clo1100_0422	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_0456	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_0475	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_0475	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Clo1100_0475	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_0575	PWY-2201	folate transformations I
Clo1100_0575	PWY-3841	folate transformations II
Clo1100_0580	PWY-6788	cellulose degradation II (fungi)
Clo1100_0590	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_0612	PWY-4261	glycerol degradation I
Clo1100_0616	PWY-2941	L-lysine biosynthesis II
Clo1100_0616	PWY-2942	L-lysine biosynthesis III
Clo1100_0616	PWY-5097	L-lysine biosynthesis VI
Clo1100_0616	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_0616	PWY-6559	spermidine biosynthesis II
Clo1100_0616	PWY-6562	norspermidine biosynthesis
Clo1100_0616	PWY-7153	grixazone biosynthesis
Clo1100_0616	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_0626	PWY-5480	pyruvate fermentation to ethanol I
Clo1100_0626	PWY-5485	pyruvate fermentation to acetate IV
Clo1100_0626	PWY-5493	reductive monocarboxylic acid cycle
Clo1100_0631	PWY-5913	TCA cycle VI (obligate autotrophs)
Clo1100_0631	PWY-6549	L-glutamine biosynthesis III
Clo1100_0631	PWY-6728	methylaspartate cycle
Clo1100_0631	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
Clo1100_0631	PWY-7124	ethylene biosynthesis V (engineered)
Clo1100_0631	PWY-7254	TCA cycle VII (acetate-producers)
Clo1100_0631	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Clo1100_0638	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_0638	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clo1100_0638	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_0638	PWY-5723	Rubisco shunt
Clo1100_0638	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clo1100_0638	PWY-6886	1-butanol autotrophic biosynthesis
Clo1100_0638	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_0638	PWY-7003	glycerol degradation to butanol
Clo1100_0638	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Clo1100_0638	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clo1100_0657	PWY-101	photosynthesis light reactions
Clo1100_0657	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
Clo1100_0663	PWY-6454	vancomycin resistance I
Clo1100_0663	PWY-6455	vancomycin resistance II
Clo1100_0670	PWY-2941	L-lysine biosynthesis II
Clo1100_0670	PWY-2942	L-lysine biosynthesis III
Clo1100_0670	PWY-5097	L-lysine biosynthesis VI
Clo1100_0671	PWY-2941	L-lysine biosynthesis II
Clo1100_0671	PWY-2942	L-lysine biosynthesis III
Clo1100_0671	PWY-5097	L-lysine biosynthesis VI
Clo1100_0694	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Clo1100_0694	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clo1100_0694	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_0694	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
Clo1100_0694	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Clo1100_0694	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clo1100_0697	PWY-2941	L-lysine biosynthesis II
Clo1100_0697	PWY-2942	L-lysine biosynthesis III
Clo1100_0697	PWY-5097	L-lysine biosynthesis VI
Clo1100_0725	PWY-6349	CDP-archaeol biosynthesis
Clo1100_0726	PWY-5481	pyruvate fermentation to lactate
Clo1100_0726	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_0738	PWY-2201	folate transformations I
Clo1100_0738	PWY-3841	folate transformations II
Clo1100_0741	PWY-2301	<i>myo</i>-inositol biosynthesis
Clo1100_0741	PWY-4702	phytate degradation I
Clo1100_0741	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
Clo1100_0742	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_0768	PWY-6807	xyloglucan degradation II (exoglucanase)
Clo1100_0792	PWY-381	nitrate reduction II (assimilatory)
Clo1100_0792	PWY-5675	nitrate reduction V (assimilatory)
Clo1100_0792	PWY-6549	L-glutamine biosynthesis III
Clo1100_0792	PWY-6963	ammonia assimilation cycle I
Clo1100_0792	PWY-6964	ammonia assimilation cycle II
Clo1100_0794	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
Clo1100_0801	PWY-381	nitrate reduction II (assimilatory)
Clo1100_0801	PWY-5675	nitrate reduction V (assimilatory)
Clo1100_0801	PWY-6549	L-glutamine biosynthesis III
Clo1100_0801	PWY-6963	ammonia assimilation cycle I
Clo1100_0801	PWY-6964	ammonia assimilation cycle II
Clo1100_0805	PWY-40	putrescine biosynthesis I
Clo1100_0805	PWY-6305	putrescine biosynthesis IV
Clo1100_0811	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_0812	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_0813	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_0820	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_0828	PWY-2941	L-lysine biosynthesis II
Clo1100_0828	PWY-5097	L-lysine biosynthesis VI
Clo1100_0829	PWY-5097	L-lysine biosynthesis VI
Clo1100_0849	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Clo1100_0849	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clo1100_0849	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Clo1100_0849	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clo1100_0849	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_0849	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_0849	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clo1100_0849	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Clo1100_0862	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_0865	PWY-1341	phenylacetate degradation II (anaerobic)
Clo1100_0865	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Clo1100_0869	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clo1100_0882	PWY-1361	benzoyl-CoA degradation I (aerobic)
Clo1100_0882	PWY-5109	2-methylbutanoate biosynthesis
Clo1100_0882	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
Clo1100_0882	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
Clo1100_0882	PWY-5177	glutaryl-CoA degradation
Clo1100_0882	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Clo1100_0882	PWY-6435	4-hydroxybenzoate biosynthesis V
Clo1100_0882	PWY-6583	pyruvate fermentation to butanol I
Clo1100_0882	PWY-6863	pyruvate fermentation to hexanol
Clo1100_0882	PWY-6883	pyruvate fermentation to butanol II
Clo1100_0882	PWY-6944	androstenedione degradation
Clo1100_0882	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
Clo1100_0882	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
Clo1100_0882	PWY-7007	methyl ketone biosynthesis
Clo1100_0882	PWY-7046	4-coumarate degradation (anaerobic)
Clo1100_0882	PWY-7094	fatty acid salvage
Clo1100_0882	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
Clo1100_0882	PWY-735	jasmonic acid biosynthesis
Clo1100_0882	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
Clo1100_0886	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_0886	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Clo1100_0886	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_0893	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_0893	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Clo1100_0893	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_0898	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_0898	PWY-6416	quinate degradation II
Clo1100_0898	PWY-6707	gallate biosynthesis
Clo1100_0910	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_0917	PWY-6527	stachyose degradation
Clo1100_0918	PWY-6807	xyloglucan degradation II (exoglucanase)
Clo1100_0927	PWY-1081	homogalacturonan degradation
Clo1100_0927	PWY-7246	pectin degradation II
Clo1100_0927	PWY-7248	pectin degradation III
Clo1100_0933	PWY-6788	cellulose degradation II (fungi)
Clo1100_0950	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Clo1100_0952	PWY-5194	siroheme biosynthesis
Clo1100_0952	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Clo1100_0953	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Clo1100_0954	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Clo1100_0956	PWY-5194	siroheme biosynthesis
Clo1100_0956	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Clo1100_0957	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Clo1100_0957	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Clo1100_0958	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Clo1100_0958	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Clo1100_0958	PWY-5194	siroheme biosynthesis
Clo1100_0958	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Clo1100_0959	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Clo1100_0959	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
Clo1100_0960	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Clo1100_0961	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Clo1100_0962	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
Clo1100_0968	PWY-6754	<i>S</i>-methyl-5'-thioadenosine degradation I
Clo1100_0969	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
Clo1100_0969	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Clo1100_0977	PWY-6788	cellulose degradation II (fungi)
Clo1100_0990	PWY-3841	folate transformations II
Clo1100_0990	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clo1100_0990	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_0990	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Clo1100_0990	PWY-7199	pyrimidine deoxyribonucleosides salvage
Clo1100_0990	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clo1100_0991	PWY-3841	folate transformations II
Clo1100_0991	PWY-6614	tetrahydrofolate biosynthesis
Clo1100_1011	PWY-5663	tetrahydrobiopterin biosynthesis I
Clo1100_1011	PWY-5664	tetrahydrobiopterin biosynthesis II
Clo1100_1011	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clo1100_1011	PWY-6703	preQ<sub>0</sub> biosynthesis
Clo1100_1011	PWY-6983	tetrahydrobiopterin biosynthesis III
Clo1100_1011	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Clo1100_1013	PWY-6614	tetrahydrofolate biosynthesis
Clo1100_1014	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clo1100_1014	PWY-6148	tetrahydromethanopterin biosynthesis
Clo1100_1014	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Clo1100_1014	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Clo1100_1015	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clo1100_1015	PWY-6148	tetrahydromethanopterin biosynthesis
Clo1100_1015	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
Clo1100_1015	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Clo1100_1016	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Clo1100_1016	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Clo1100_1016	PWY-6268	adenosylcobalamin salvage from cobalamin
Clo1100_1016	PWY-6269	adenosylcobalamin salvage from cobinamide II
Clo1100_1017	PWY-622	starch biosynthesis
Clo1100_1018	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
Clo1100_1018	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clo1100_1018	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
Clo1100_1018	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clo1100_1018	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_1018	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_1018	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
Clo1100_1018	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
Clo1100_1027	PWY-4983	L-citrulline-nitric oxide cycle
Clo1100_1027	PWY-4984	urea cycle
Clo1100_1027	PWY-5	canavanine biosynthesis
Clo1100_1027	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_1027	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_1028	PWY-4983	L-citrulline-nitric oxide cycle
Clo1100_1028	PWY-4984	urea cycle
Clo1100_1028	PWY-5	canavanine biosynthesis
Clo1100_1028	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_1028	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_1036	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
Clo1100_1043	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
Clo1100_1043	PWY-6153	autoinducer AI-2 biosynthesis I
Clo1100_1043	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
Clo1100_1048	PWY-5381	pyridine nucleotide cycling (plants)
Clo1100_1048	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Clo1100_1055	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clo1100_1055	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clo1100_1078	PWY-2721	trehalose degradation III
Clo1100_1078	PWY-2722	trehalose degradation IV
Clo1100_1078	PWY-6317	galactose degradation I (Leloir pathway)
Clo1100_1078	PWY-7459	kojibiose degradation
Clo1100_1081	PWY-6317	galactose degradation I (Leloir pathway)
Clo1100_1081	PWY-6527	stachyose degradation
Clo1100_1082	PWY-3821	galactose degradation III
Clo1100_1082	PWY-6317	galactose degradation I (Leloir pathway)
Clo1100_1082	PWY-6527	stachyose degradation
Clo1100_1083	PWY-3821	galactose degradation III
Clo1100_1083	PWY-6317	galactose degradation I (Leloir pathway)
Clo1100_1083	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
Clo1100_1083	PWY-6527	stachyose degradation
Clo1100_1083	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
Clo1100_1083	PWY-7344	UDP-D-galactose biosynthesis
Clo1100_1093	PWY-1341	phenylacetate degradation II (anaerobic)
Clo1100_1093	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Clo1100_1121	PWY-6749	CMP-legionaminate biosynthesis I
Clo1100_1202	PWY-2723	trehalose degradation V
Clo1100_1202	PWY-6317	galactose degradation I (Leloir pathway)
Clo1100_1202	PWY-6737	starch degradation V
Clo1100_1209	PWY-7193	pyrimidine ribonucleosides salvage I
Clo1100_1210	PWY-1281	sulfoacetaldehyde degradation I
Clo1100_1210	PWY-5482	pyruvate fermentation to acetate II
Clo1100_1210	PWY-5485	pyruvate fermentation to acetate IV
Clo1100_1210	PWY-5497	purine nucleobases degradation II (anaerobic)
Clo1100_1210	PWY-6637	sulfolactate degradation II
Clo1100_1220	PWY-3801	sucrose degradation II (sucrose synthase)
Clo1100_1220	PWY-5054	sorbitol biosynthesis I
Clo1100_1220	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
Clo1100_1220	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Clo1100_1220	PWY-5659	GDP-mannose biosynthesis
Clo1100_1220	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clo1100_1220	PWY-621	sucrose degradation III (sucrose invertase)
Clo1100_1220	PWY-622	starch biosynthesis
Clo1100_1220	PWY-6531	mannitol cycle
Clo1100_1220	PWY-6981	chitin biosynthesis
Clo1100_1220	PWY-7238	sucrose biosynthesis II
Clo1100_1220	PWY-7347	sucrose biosynthesis III
Clo1100_1220	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clo1100_1222	PWY-2161	folate polyglutamylation
Clo1100_1238	PWY-5269	cardiolipin biosynthesis II
Clo1100_1238	PWY-5668	cardiolipin biosynthesis I
Clo1100_1316	PWY-7456	mannan degradation
Clo1100_1353	PWY-6788	cellulose degradation II (fungi)
Clo1100_1420	PWY-6788	cellulose degradation II (fungi)
Clo1100_1430	PWY-5372	carbon tetrachloride degradation II
Clo1100_1430	PWY-6780	hydrogen production VI
Clo1100_1447	PWY-7560	methylerythritol phosphate pathway II
Clo1100_1449	PWY-7560	methylerythritol phosphate pathway II
Clo1100_1459	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
Clo1100_1459	PWY-6167	flavin biosynthesis II (archaea)
Clo1100_1459	PWY-6168	flavin biosynthesis III (fungi)
Clo1100_1478	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_1478	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_1479	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clo1100_1479	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Clo1100_1479	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clo1100_1481	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clo1100_1481	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
Clo1100_1481	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
Clo1100_1481	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clo1100_1485	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clo1100_1485	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clo1100_1538	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
Clo1100_1545	PWY-2941	L-lysine biosynthesis II
Clo1100_1545	PWY-2942	L-lysine biosynthesis III
Clo1100_1545	PWY-5097	L-lysine biosynthesis VI
Clo1100_1547	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clo1100_1547	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clo1100_1557	PWY-2941	L-lysine biosynthesis II
Clo1100_1557	PWY-2942	L-lysine biosynthesis III
Clo1100_1557	PWY-5097	L-lysine biosynthesis VI
Clo1100_1558	PWY-2941	L-lysine biosynthesis II
Clo1100_1558	PWY-2942	L-lysine biosynthesis III
Clo1100_1558	PWY-5097	L-lysine biosynthesis VI
Clo1100_1560	PWY-2941	L-lysine biosynthesis II
Clo1100_1560	PWY-2942	L-lysine biosynthesis III
Clo1100_1560	PWY-5097	L-lysine biosynthesis VI
Clo1100_1560	PWY-6559	spermidine biosynthesis II
Clo1100_1560	PWY-6562	norspermidine biosynthesis
Clo1100_1560	PWY-7153	grixazone biosynthesis
Clo1100_1561	PWY-6700	queuosine biosynthesis
Clo1100_1562	PWY-6700	queuosine biosynthesis
Clo1100_1566	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_1578	PWY-5663	tetrahydrobiopterin biosynthesis I
Clo1100_1578	PWY-5664	tetrahydrobiopterin biosynthesis II
Clo1100_1578	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clo1100_1578	PWY-6703	preQ<sub>0</sub> biosynthesis
Clo1100_1578	PWY-6983	tetrahydrobiopterin biosynthesis III
Clo1100_1578	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Clo1100_1596	PWY-381	nitrate reduction II (assimilatory)
Clo1100_1596	PWY-5675	nitrate reduction V (assimilatory)
Clo1100_1596	PWY-6549	L-glutamine biosynthesis III
Clo1100_1596	PWY-6963	ammonia assimilation cycle I
Clo1100_1596	PWY-6964	ammonia assimilation cycle II
Clo1100_1607	PWY-6703	preQ<sub>0</sub> biosynthesis
Clo1100_1621	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Clo1100_1626	PWY-6703	preQ<sub>0</sub> biosynthesis
Clo1100_1639	PWY-7039	phosphatidate metabolism, as a signaling molecule
Clo1100_1640	PWY-6556	pyrimidine ribonucleosides salvage II
Clo1100_1640	PWY-7181	pyrimidine deoxyribonucleosides degradation
Clo1100_1640	PWY-7193	pyrimidine ribonucleosides salvage I
Clo1100_1640	PWY-7199	pyrimidine deoxyribonucleosides salvage
Clo1100_1659	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clo1100_1667	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
Clo1100_1667	PWY-2201	folate transformations I
Clo1100_1667	PWY-3841	folate transformations II
Clo1100_1667	PWY-5030	L-histidine degradation III
Clo1100_1667	PWY-5497	purine nucleobases degradation II (anaerobic)
Clo1100_1667	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Clo1100_1674	PWY-7183	pyrimidine nucleobases salvage I
Clo1100_1675	PWY-5686	UMP biosynthesis
Clo1100_1676	PWY-5686	UMP biosynthesis
Clo1100_1677	PWY-5686	UMP biosynthesis
Clo1100_1678	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_1678	PWY-5686	UMP biosynthesis
Clo1100_1678	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_1679	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_1679	PWY-5686	UMP biosynthesis
Clo1100_1679	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_1721	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Clo1100_1721	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Clo1100_1721	PWY-6269	adenosylcobalamin salvage from cobinamide II
Clo1100_1722	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Clo1100_1722	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Clo1100_1722	PWY-6269	adenosylcobalamin salvage from cobinamide II
Clo1100_1723	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
Clo1100_1723	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
Clo1100_1723	PWY-6269	adenosylcobalamin salvage from cobinamide II
Clo1100_1741	PWY-5269	cardiolipin biosynthesis II
Clo1100_1741	PWY-5668	cardiolipin biosynthesis I
Clo1100_1742	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_1748	PWY-1341	phenylacetate degradation II (anaerobic)
Clo1100_1748	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Clo1100_1750	PWY-6012	acyl carrier protein metabolism I
Clo1100_1750	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Clo1100_1758	PWY-5269	cardiolipin biosynthesis II
Clo1100_1758	PWY-5668	cardiolipin biosynthesis I
Clo1100_1761	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_1762	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_1762	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Clo1100_1762	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_1763	PWY-5367	petroselinate biosynthesis
Clo1100_1763	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Clo1100_1763	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Clo1100_1763	PWY-5989	stearate biosynthesis II (bacteria and plants)
Clo1100_1763	PWY-5994	palmitate biosynthesis I (animals and fungi)
Clo1100_1763	PWY-6113	superpathway of mycolate biosynthesis
Clo1100_1763	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Clo1100_1763	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Clo1100_1763	PWY-6951	Clo1100_1763|Clo1100_1763|YP_005147778.1|GeneID:11719481
Clo1100_1763	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Clo1100_1763	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_1763	PWYG-321	mycolate biosynthesis
Clo1100_1769	PWY-6854	ethylene biosynthesis III (microbes)
Clo1100_1781	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_1781	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_1781	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
Clo1100_1784	PWY-3961	phosphopantothenate biosynthesis II
Clo1100_1792	PWY-6829	tRNA methylation (yeast)
Clo1100_1792	PWY-7285	methylwyosine biosynthesis
Clo1100_1792	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
Clo1100_1794	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_1810	PWY-7533	gliotoxin biosynthesis
Clo1100_1812	PWY-6123	inosine-5'-phosphate biosynthesis I
Clo1100_1812	PWY-6124	inosine-5'-phosphate biosynthesis II
Clo1100_1812	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_1812	PWY-7234	inosine-5'-phosphate biosynthesis III
Clo1100_1820	PWY-6788	cellulose degradation II (fungi)
Clo1100_1821	PWY-6788	cellulose degradation II (fungi)
Clo1100_1822	PWY-6788	cellulose degradation II (fungi)
Clo1100_1824	PWY-6788	cellulose degradation II (fungi)
Clo1100_1825	PWY-6788	cellulose degradation II (fungi)
Clo1100_1827	PWY-6788	cellulose degradation II (fungi)
Clo1100_1838	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
Clo1100_1838	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
Clo1100_1847	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_1849	PWY-7456	mannan degradation
Clo1100_1850	PWY-6788	cellulose degradation II (fungi)
Clo1100_1851	PWY-6788	cellulose degradation II (fungi)
Clo1100_1852	PWY-6788	cellulose degradation II (fungi)
Clo1100_1878	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clo1100_1878	PWY-5723	Rubisco shunt
Clo1100_1879	PWY-6898	thiamin salvage III
Clo1100_1879	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Clo1100_1879	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Clo1100_1900	PWY-6902	chitin degradation II
Clo1100_1901	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_1904	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_1905	PWY-7456	mannan degradation
Clo1100_1931	PWY-6527	stachyose degradation
Clo1100_1948	PWY-6683	sulfate reduction III (assimilatory)
Clo1100_1949	PWY-5278	sulfite oxidation III
Clo1100_1949	PWY-5340	sulfate activation for sulfonation
Clo1100_1949	PWY-6683	sulfate reduction III (assimilatory)
Clo1100_1949	PWY-6932	selenate reduction
Clo1100_1958	PWY-6788	cellulose degradation II (fungi)
Clo1100_1990	PWY-6788	cellulose degradation II (fungi)
Clo1100_1993	PWY-1622	formaldehyde assimilation I (serine pathway)
Clo1100_1993	PWY-181	photorespiration
Clo1100_1993	PWY-2161	folate polyglutamylation
Clo1100_1993	PWY-2201	folate transformations I
Clo1100_1993	PWY-3661	glycine betaine degradation I
Clo1100_1993	PWY-3661-1	glycine betaine degradation II (mammalian)
Clo1100_1993	PWY-3841	folate transformations II
Clo1100_1993	PWY-5497	purine nucleobases degradation II (anaerobic)
Clo1100_1997	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_1997	PWY-6891	thiazole biosynthesis II (Bacillus)
Clo1100_1997	PWY-6892	thiazole biosynthesis I (E. coli)
Clo1100_1997	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Clo1100_2008	PWY-2781	<i>cis</i>-zeatin biosynthesis
Clo1100_2028	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clo1100_2030	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_2030	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_2046	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_2046	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_2049	PWY-7560	methylerythritol phosphate pathway II
Clo1100_2050	PWY-7205	CMP phosphorylation
Clo1100_2051	PWY-3461	L-tyrosine biosynthesis II
Clo1100_2051	PWY-3462	L-phenylalanine biosynthesis II
Clo1100_2051	PWY-6120	L-tyrosine biosynthesis III
Clo1100_2051	PWY-6627	salinosporamide A biosynthesis
Clo1100_2059	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_2059	PWY-5743	3-hydroxypropanoate cycle
Clo1100_2059	PWY-5744	glyoxylate assimilation
Clo1100_2059	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
Clo1100_2059	PWY-6679	jadomycin biosynthesis
Clo1100_2059	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_2070	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
Clo1100_2070	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
Clo1100_2071	PWY-7181	pyrimidine deoxyribonucleosides degradation
Clo1100_2076	PWY-3341	L-proline biosynthesis III
Clo1100_2076	PWY-4981	L-proline biosynthesis II (from arginine)
Clo1100_2076	PWY-6344	L-ornithine degradation II (Stickland reaction)
Clo1100_2077	PWY-1341	phenylacetate degradation II (anaerobic)
Clo1100_2077	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
Clo1100_2113	PWY-5155	&beta;-alanine biosynthesis III
Clo1100_2115	PWY-6654	phosphopantothenate biosynthesis III
Clo1100_2121	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_2187	PWY-6164	3-dehydroquinate biosynthesis I
Clo1100_2200	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_2203	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
Clo1100_2203	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
Clo1100_2214	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_2214	PWY-6891	thiazole biosynthesis II (Bacillus)
Clo1100_2214	PWY-6892	thiazole biosynthesis I (E. coli)
Clo1100_2214	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Clo1100_2218	PWY-5057	L-valine degradation II
Clo1100_2218	PWY-5076	L-leucine degradation III
Clo1100_2218	PWY-5078	L-isoleucine degradation II
Clo1100_2218	PWY-5101	L-isoleucine biosynthesis II
Clo1100_2218	PWY-5103	L-isoleucine biosynthesis III
Clo1100_2218	PWY-5104	L-isoleucine biosynthesis IV
Clo1100_2218	PWY-5108	L-isoleucine biosynthesis V
Clo1100_2229	PWY-622	starch biosynthesis
Clo1100_2238	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
Clo1100_2238	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
Clo1100_2238	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
Clo1100_2240	PWY-6891	thiazole biosynthesis II (Bacillus)
Clo1100_2240	PWY-6892	thiazole biosynthesis I (E. coli)
Clo1100_2240	PWY-7560	methylerythritol phosphate pathway II
Clo1100_2265	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
Clo1100_2265	PWY-6416	quinate degradation II
Clo1100_2265	PWY-6707	gallate biosynthesis
Clo1100_2273	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_2273	PWY-6891	thiazole biosynthesis II (Bacillus)
Clo1100_2273	PWY-6892	thiazole biosynthesis I (E. coli)
Clo1100_2273	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
Clo1100_2281	PWY-6749	CMP-legionaminate biosynthesis I
Clo1100_2296	PWY-6605	adenine and adenosine salvage II
Clo1100_2296	PWY-6610	adenine and adenosine salvage IV
Clo1100_2307	PWY-5344	L-homocysteine biosynthesis
Clo1100_2307	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Clo1100_2344	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Clo1100_2344	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Clo1100_2344	PWY-6897	thiamin salvage II
Clo1100_2344	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Clo1100_2344	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Clo1100_2344	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Clo1100_2344	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Clo1100_2345	PWY-6897	thiamin salvage II
Clo1100_2345	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Clo1100_2345	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Clo1100_2346	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
Clo1100_2347	PWY-6910	hydroxymethylpyrimidine salvage
Clo1100_2347	PWY-7356	thiamin salvage IV (yeast)
Clo1100_2347	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Clo1100_2362	PWY-6167	flavin biosynthesis II (archaea)
Clo1100_2362	PWY-6168	flavin biosynthesis III (fungi)
Clo1100_2363	PWY-6167	flavin biosynthesis II (archaea)
Clo1100_2363	PWY-6168	flavin biosynthesis III (fungi)
Clo1100_2363	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
Clo1100_2364	PWY-6167	flavin biosynthesis II (archaea)
Clo1100_2364	PWY-6168	flavin biosynthesis III (fungi)
Clo1100_2364	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_2408	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_2468	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Clo1100_2468	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Clo1100_2468	PWY-6164	3-dehydroquinate biosynthesis I
Clo1100_2476	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_2476	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_2499	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_2504	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_2535	PWY-5667	CDP-diacylglycerol biosynthesis I
Clo1100_2535	PWY-5981	CDP-diacylglycerol biosynthesis III
Clo1100_2541	PWY-5482	pyruvate fermentation to acetate II
Clo1100_2541	PWY-5485	pyruvate fermentation to acetate IV
Clo1100_2541	PWY-5497	purine nucleobases degradation II (anaerobic)
Clo1100_2542	PWY-1281	sulfoacetaldehyde degradation I
Clo1100_2542	PWY-5482	pyruvate fermentation to acetate II
Clo1100_2542	PWY-5485	pyruvate fermentation to acetate IV
Clo1100_2542	PWY-5497	purine nucleobases degradation II (anaerobic)
Clo1100_2542	PWY-6637	sulfolactate degradation II
Clo1100_2544	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
Clo1100_2545	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_2545	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clo1100_2545	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_2545	PWY-5723	Rubisco shunt
Clo1100_2545	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clo1100_2545	PWY-6886	1-butanol autotrophic biosynthesis
Clo1100_2545	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_2545	PWY-7003	glycerol degradation to butanol
Clo1100_2545	PWY-7124	ethylene biosynthesis V (engineered)
Clo1100_2545	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Clo1100_2573	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Clo1100_2585	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clo1100_2585	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Clo1100_2585	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Clo1100_2586	PWY-6123	inosine-5'-phosphate biosynthesis I
Clo1100_2586	PWY-6124	inosine-5'-phosphate biosynthesis II
Clo1100_2586	PWY-7234	inosine-5'-phosphate biosynthesis III
Clo1100_2587	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clo1100_2587	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
Clo1100_2588	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clo1100_2588	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Clo1100_2588	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Clo1100_2589	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
Clo1100_2589	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
Clo1100_2589	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
Clo1100_2589	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
Clo1100_2590	PWY-6123	inosine-5'-phosphate biosynthesis I
Clo1100_2590	PWY-7234	inosine-5'-phosphate biosynthesis III
Clo1100_2596	PWY-6871	3-methylbutanol biosynthesis
Clo1100_2599	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_2608	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Clo1100_2638	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_2651	PWY-5941	glycogen degradation II (eukaryotic)
Clo1100_2651	PWY-622	starch biosynthesis
Clo1100_2651	PWY-6731	starch degradation III
Clo1100_2651	PWY-6737	starch degradation V
Clo1100_2651	PWY-7238	sucrose biosynthesis II
Clo1100_2660	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_2660	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clo1100_2660	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_2660	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clo1100_2660	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clo1100_2661	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_2661	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clo1100_2661	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_2661	PWY-6531	mannitol cycle
Clo1100_2661	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clo1100_2669	PWY-5480	pyruvate fermentation to ethanol I
Clo1100_2669	PWY-5485	pyruvate fermentation to acetate IV
Clo1100_2669	PWY-5493	reductive monocarboxylic acid cycle
Clo1100_2671	PWY-6788	cellulose degradation II (fungi)
Clo1100_2698	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_2698	PWY-1622	formaldehyde assimilation I (serine pathway)
Clo1100_2698	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clo1100_2698	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_2698	PWY-5723	Rubisco shunt
Clo1100_2698	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clo1100_2698	PWY-6886	1-butanol autotrophic biosynthesis
Clo1100_2698	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_2698	PWY-7003	glycerol degradation to butanol
Clo1100_2698	PWY-7124	ethylene biosynthesis V (engineered)
Clo1100_2698	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Clo1100_2703	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_2703	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clo1100_2703	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_2703	PWY-5723	Rubisco shunt
Clo1100_2703	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clo1100_2703	PWY-6886	1-butanol autotrophic biosynthesis
Clo1100_2703	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_2703	PWY-7003	glycerol degradation to butanol
Clo1100_2703	PWY-7124	ethylene biosynthesis V (engineered)
Clo1100_2703	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
Clo1100_2704	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_2704	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_2704	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
Clo1100_2704	PWY-6886	1-butanol autotrophic biosynthesis
Clo1100_2704	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_2704	PWY-7003	glycerol degradation to butanol
Clo1100_2715	PWY-3821	galactose degradation III
Clo1100_2715	PWY-6317	galactose degradation I (Leloir pathway)
Clo1100_2715	PWY-6527	stachyose degradation
Clo1100_2716	PWY-6317	galactose degradation I (Leloir pathway)
Clo1100_2716	PWY-6527	stachyose degradation
Clo1100_2719	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_2719	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_2719	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_2719	PWY-7003	glycerol degradation to butanol
Clo1100_2732	PWY-5941	glycogen degradation II (eukaryotic)
Clo1100_2732	PWY-6724	starch degradation II
Clo1100_2732	PWY-6737	starch degradation V
Clo1100_2732	PWY-7238	sucrose biosynthesis II
Clo1100_2735	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_2735	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_2768	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_2769	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_2779	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_2779	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Clo1100_2779	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_2806	PWY-5162	2-oxopentenoate degradation
Clo1100_2823	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clo1100_2823	PWY-5723	Rubisco shunt
Clo1100_2825	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clo1100_2825	PWY-5723	Rubisco shunt
Clo1100_2828	PWY-6891	thiazole biosynthesis II (Bacillus)
Clo1100_2828	PWY-6892	thiazole biosynthesis I (E. coli)
Clo1100_2828	PWY-7560	methylerythritol phosphate pathway II
Clo1100_2831	PWY-6349	CDP-archaeol biosynthesis
Clo1100_2845	PWY-6749	CMP-legionaminate biosynthesis I
Clo1100_2848	PWY-6749	CMP-legionaminate biosynthesis I
Clo1100_2853	PWY-5381	pyridine nucleotide cycling (plants)
Clo1100_2853	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Clo1100_2867	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_2876	PWY-3861	mannitol degradation II
Clo1100_2876	PWY-3881	mannitol biosynthesis
Clo1100_2876	PWY-5659	GDP-mannose biosynthesis
Clo1100_2876	PWY-7456	mannan degradation
Clo1100_2876	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Clo1100_2907	PWY-6788	cellulose degradation II (fungi)
Clo1100_2919	PWY-6012	acyl carrier protein metabolism I
Clo1100_2919	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
Clo1100_2928	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Clo1100_2928	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Clo1100_2928	PWY-5989	stearate biosynthesis II (bacteria and plants)
Clo1100_2928	PWY-5994	palmitate biosynthesis I (animals and fungi)
Clo1100_2928	PWY-6113	superpathway of mycolate biosynthesis
Clo1100_2928	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Clo1100_2928	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Clo1100_2928	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_2928	PWYG-321	mycolate biosynthesis
Clo1100_2930	PWY-5367	petroselinate biosynthesis
Clo1100_2930	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Clo1100_2930	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Clo1100_2930	PWY-5989	stearate biosynthesis II (bacteria and plants)
Clo1100_2930	PWY-5994	palmitate biosynthesis I (animals and fungi)
Clo1100_2930	PWY-6113	superpathway of mycolate biosynthesis
Clo1100_2930	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Clo1100_2930	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Clo1100_2930	PWY-6951	Clo1100_2930|Clo1100_2930|YP_005148887.1|GeneID:11720816
Clo1100_2930	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
Clo1100_2930	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_2930	PWYG-321	mycolate biosynthesis
Clo1100_2931	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_2931	PWY-6799	fatty acid biosynthesis (plant mitochondria)
Clo1100_2931	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_2948	PWY-6562	norspermidine biosynthesis
Clo1100_2957	PWY-40	putrescine biosynthesis I
Clo1100_2957	PWY-43	putrescine biosynthesis II
Clo1100_2957	PWY-6305	putrescine biosynthesis IV
Clo1100_2957	PWY-6834	spermidine biosynthesis III
Clo1100_2985	PWY-6891	thiazole biosynthesis II (Bacillus)
Clo1100_2985	PWY-6892	thiazole biosynthesis I (E. coli)
Clo1100_2986	PWY-6892	thiazole biosynthesis I (E. coli)
Clo1100_2986	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Clo1100_2987	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
Clo1100_2987	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
Clo1100_2987	PWY-6897	thiamin salvage II
Clo1100_2987	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
Clo1100_2987	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
Clo1100_2987	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
Clo1100_2987	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
Clo1100_3007	PWY-3221	dTDP-L-rhamnose biosynthesis II
Clo1100_3007	PWY-6808	dTDP-D-forosamine biosynthesis
Clo1100_3007	PWY-6942	dTDP-D-desosamine biosynthesis
Clo1100_3007	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
Clo1100_3007	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
Clo1100_3007	PWY-6974	dTDP-L-olivose biosynthesis
Clo1100_3007	PWY-6976	dTDP-L-mycarose biosynthesis
Clo1100_3007	PWY-7104	dTDP-L-megosamine biosynthesis
Clo1100_3007	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
Clo1100_3007	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
Clo1100_3007	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
Clo1100_3007	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
Clo1100_3007	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
Clo1100_3007	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
Clo1100_3007	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
Clo1100_3007	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
Clo1100_3028	PWY-4261	glycerol degradation I
Clo1100_3079	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Clo1100_3079	PWY-6855	chitin degradation I (archaea)
Clo1100_3079	PWY-6906	chitin derivatives degradation
Clo1100_3080	PWY-6906	chitin derivatives degradation
Clo1100_3080	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
Clo1100_3080	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
Clo1100_3107	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
Clo1100_3107	PWY-581	indole-3-acetate biosynthesis II
Clo1100_3107	PWY-7308	acrylonitrile degradation I
Clo1100_3115	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_3148	PWY-1042	glycolysis IV (plant cytosol)
Clo1100_3148	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clo1100_3148	PWY-5484	glycolysis II (from fructose 6-phosphate)
Clo1100_3148	PWY-7385	1,3-propanediol biosynthesis (engineered)
Clo1100_3149	PWY-5669	phosphatidylethanolamine biosynthesis I
Clo1100_3233	PWY-5659	GDP-mannose biosynthesis
Clo1100_3233	PWY-6073	alginate biosynthesis I (algal)
Clo1100_3233	PWY-6082	alginate biosynthesis II (bacterial)
Clo1100_3233	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
Clo1100_3282	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_3295	PWY-7310	D-glucosaminate degradation
Clo1100_3296	PWY-7310	D-glucosaminate degradation
Clo1100_3307	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
Clo1100_3307	PWY-6855	chitin degradation I (archaea)
Clo1100_3307	PWY-6906	chitin derivatives degradation
Clo1100_3308	PWY-6164	3-dehydroquinate biosynthesis I
Clo1100_3316	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_3317	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_3321	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_3328	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_3339	PWY-6502	oxidized GTP and dGTP detoxification
Clo1100_3344	PWY-5663	tetrahydrobiopterin biosynthesis I
Clo1100_3344	PWY-5664	tetrahydrobiopterin biosynthesis II
Clo1100_3344	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
Clo1100_3344	PWY-6703	preQ<sub>0</sub> biosynthesis
Clo1100_3344	PWY-6983	tetrahydrobiopterin biosynthesis III
Clo1100_3344	PWY-7442	drosopterin and aurodrosopterin biosynthesis
Clo1100_3345	PWY-6703	preQ<sub>0</sub> biosynthesis
Clo1100_3348	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_3350	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_3354	PWY-6823	molybdenum cofactor biosynthesis
Clo1100_3400	PWY-4621	arsenate detoxification II (glutaredoxin)
Clo1100_3407	PWY-4202	arsenate detoxification I (glutaredoxin)
Clo1100_3433	PWY-4041	&gamma;-glutamyl cycle
Clo1100_3492	PWY-4621	arsenate detoxification II (glutaredoxin)
Clo1100_3499	PWY-4202	arsenate detoxification I (glutaredoxin)
Clo1100_3513	PWY-4041	&gamma;-glutamyl cycle
Clo1100_3591	PWY-4041	&gamma;-glutamyl cycle
Clo1100_3597	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
Clo1100_3597	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
Clo1100_3627	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
Clo1100_3627	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
Clo1100_3627	PWY-6164	3-dehydroquinate biosynthesis I
Clo1100_3628	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
Clo1100_3632	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_3634	PWY-4381	fatty acid biosynthesis initiation I
Clo1100_3679	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_3679	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_3680	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_3680	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_3682	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_3682	PWY-5686	UMP biosynthesis
Clo1100_3682	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_3683	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
Clo1100_3683	PWY-5686	UMP biosynthesis
Clo1100_3683	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_3684	PWY-4981	L-proline biosynthesis II (from arginine)
Clo1100_3684	PWY-4984	urea cycle
Clo1100_3684	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
Clo1100_3687	PWY-5372	carbon tetrachloride degradation II
Clo1100_3687	PWY-6780	hydrogen production VI
Clo1100_3695	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
Clo1100_3696	PWY-6938	NADH repair
Clo1100_3704	PWY-5381	pyridine nucleotide cycling (plants)
Clo1100_3736	PWY-5381	pyridine nucleotide cycling (plants)
Clo1100_3751	PWY-7456	mannan degradation
Clo1100_3758	PWY-7456	mannan degradation
Clo1100_3759	PWY-7456	mannan degradation
Clo1100_3817	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_3817	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_3818	PWY-5971	palmitate biosynthesis II (bacteria and plants)
Clo1100_3818	PWY-5973	<i>cis</i>-vaccenate biosynthesis
Clo1100_3818	PWY-5989	stearate biosynthesis II (bacteria and plants)
Clo1100_3818	PWY-5994	palmitate biosynthesis I (animals and fungi)
Clo1100_3818	PWY-6113	superpathway of mycolate biosynthesis
Clo1100_3818	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
Clo1100_3818	PWY-6519	8-amino-7-oxononanoate biosynthesis I
Clo1100_3818	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
Clo1100_3818	PWYG-321	mycolate biosynthesis
Clo1100_3825	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Clo1100_3837	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
Clo1100_3839	PWY-6936	seleno-amino acid biosynthesis
Clo1100_3840	PWY-6936	seleno-amino acid biosynthesis
Clo1100_3843	PWY-5198	factor 420 biosynthesis
Clo1100_3843	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
Clo1100_3848	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
Clo1100_3848	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
Clo1100_3848	PWY-7242	D-fructuronate degradation
Clo1100_3848	PWY-7310	D-glucosaminate degradation
Clo1100_3852	PWY-3162	L-tryptophan degradation V (side chain pathway)
Clo1100_3852	PWY-5057	L-valine degradation II
Clo1100_3852	PWY-5076	L-leucine degradation III
Clo1100_3852	PWY-5078	L-isoleucine degradation II
Clo1100_3852	PWY-5079	L-phenylalanine degradation III
Clo1100_3852	PWY-5082	L-methionine degradation III
Clo1100_3852	PWY-5162	2-oxopentenoate degradation
Clo1100_3852	PWY-5436	L-threonine degradation IV
Clo1100_3852	PWY-5480	pyruvate fermentation to ethanol I
Clo1100_3852	PWY-5486	pyruvate fermentation to ethanol II
Clo1100_3852	PWY-5751	phenylethanol biosynthesis
Clo1100_3852	PWY-6028	acetoin degradation
Clo1100_3852	PWY-6313	serotonin degradation
Clo1100_3852	PWY-6333	acetaldehyde biosynthesis I
Clo1100_3852	PWY-6342	noradrenaline and adrenaline degradation
Clo1100_3852	PWY-6587	pyruvate fermentation to ethanol III
Clo1100_3852	PWY-6802	salidroside biosynthesis
Clo1100_3852	PWY-6871	3-methylbutanol biosynthesis
Clo1100_3852	PWY-7013	L-1,2-propanediol degradation
Clo1100_3852	PWY-7085	triethylamine degradation
Clo1100_3852	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clo1100_3852	PWY-7118	chitin degradation to ethanol
Clo1100_3852	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Clo1100_3852	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Clo1100_3852	PWY-7557	dehydrodiconiferyl alcohol degradation
Clo1100_3859	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Clo1100_3867	PWY-5958	acridone alkaloid biosynthesis
Clo1100_3867	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Clo1100_3867	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Clo1100_3868	PWY-5958	acridone alkaloid biosynthesis
Clo1100_3868	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
Clo1100_3868	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
Clo1100_3878	PWY-2722	trehalose degradation IV
Clo1100_3878	PWY-5661-1	Clo1100_3878|Clo1100_3878|YP_005149796.1|GeneID:11721527
Clo1100_3878	PWY-621	sucrose degradation III (sucrose invertase)
Clo1100_3893	PWY-6825	phosphatidylcholine biosynthesis V
Clo1100_3906	PWY-6936	seleno-amino acid biosynthesis
Clo1100_3906	PWY-7274	D-cycloserine biosynthesis
Clo1100_3913	PWY-5344	L-homocysteine biosynthesis
Clo1100_3913	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
Clo1100_3966	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
Clo1100_3970	PWY-4202	arsenate detoxification I (glutaredoxin)
Clo1100_3970	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
Clo1100_3970	PWY-6608	guanosine nucleotides degradation III
Clo1100_3970	PWY-6609	adenine and adenosine salvage III
Clo1100_3970	PWY-6611	adenine and adenosine salvage V
Clo1100_3970	PWY-6620	guanine and guanosine salvage
Clo1100_3970	PWY-6627	salinosporamide A biosynthesis
Clo1100_3970	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
Clo1100_3970	PWY-7179	purine deoxyribonucleosides degradation I
Clo1100_3970	PWY-7179-1	purine deoxyribonucleosides degradation
Clo1100_3974	PWY-4981	L-proline biosynthesis II (from arginine)
Clo1100_3985	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_3985	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_3997	PWY-622	starch biosynthesis
Clo1100_3998	PWY-622	starch biosynthesis
Clo1100_3999	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
Clo1100_3999	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
Clo1100_4002	PWY-3162	L-tryptophan degradation V (side chain pathway)
Clo1100_4002	PWY-5057	L-valine degradation II
Clo1100_4002	PWY-5076	L-leucine degradation III
Clo1100_4002	PWY-5078	L-isoleucine degradation II
Clo1100_4002	PWY-5079	L-phenylalanine degradation III
Clo1100_4002	PWY-5082	L-methionine degradation III
Clo1100_4002	PWY-5162	2-oxopentenoate degradation
Clo1100_4002	PWY-5436	L-threonine degradation IV
Clo1100_4002	PWY-5480	pyruvate fermentation to ethanol I
Clo1100_4002	PWY-5486	pyruvate fermentation to ethanol II
Clo1100_4002	PWY-5751	phenylethanol biosynthesis
Clo1100_4002	PWY-6028	acetoin degradation
Clo1100_4002	PWY-6313	serotonin degradation
Clo1100_4002	PWY-6333	acetaldehyde biosynthesis I
Clo1100_4002	PWY-6342	noradrenaline and adrenaline degradation
Clo1100_4002	PWY-6587	pyruvate fermentation to ethanol III
Clo1100_4002	PWY-6802	salidroside biosynthesis
Clo1100_4002	PWY-6871	3-methylbutanol biosynthesis
Clo1100_4002	PWY-7013	L-1,2-propanediol degradation
Clo1100_4002	PWY-7085	triethylamine degradation
Clo1100_4002	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clo1100_4002	PWY-7118	chitin degradation to ethanol
Clo1100_4002	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Clo1100_4002	PWY-7396	butanol and isobutanol biosynthesis (engineered)
Clo1100_4002	PWY-7557	dehydrodiconiferyl alcohol degradation
Clo1100_4006	PWY-3801	sucrose degradation II (sucrose synthase)
Clo1100_4006	PWY-6527	stachyose degradation
Clo1100_4006	PWY-6981	chitin biosynthesis
Clo1100_4006	PWY-7238	sucrose biosynthesis II
Clo1100_4006	PWY-7343	UDP-glucose biosynthesis
Clo1100_4015	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
Clo1100_4015	PWY-5723	Rubisco shunt
Clo1100_4015	PWY-6891	thiazole biosynthesis II (Bacillus)
Clo1100_4015	PWY-6892	thiazole biosynthesis I (E. coli)
Clo1100_4015	PWY-6901	superpathway of glucose and xylose degradation
Clo1100_4015	PWY-7560	methylerythritol phosphate pathway II
Clo1100_4045	PWY-4261	glycerol degradation I
Clo1100_4047	PWY-5101	L-isoleucine biosynthesis II
Clo1100_4047	PWY-6871	3-methylbutanol biosynthesis
Clo1100_4048	PWY-6871	3-methylbutanol biosynthesis
Clo1100_4049	PWY-5101	L-isoleucine biosynthesis II
Clo1100_4049	PWY-5103	L-isoleucine biosynthesis III
Clo1100_4049	PWY-5104	L-isoleucine biosynthesis IV
Clo1100_4049	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clo1100_4050	PWY-5101	L-isoleucine biosynthesis II
Clo1100_4050	PWY-5103	L-isoleucine biosynthesis III
Clo1100_4050	PWY-5104	L-isoleucine biosynthesis IV
Clo1100_4050	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Clo1100_4050	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Clo1100_4050	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Clo1100_4050	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clo1100_4051	PWY-5101	L-isoleucine biosynthesis II
Clo1100_4051	PWY-5103	L-isoleucine biosynthesis III
Clo1100_4051	PWY-5104	L-isoleucine biosynthesis IV
Clo1100_4051	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
Clo1100_4051	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
Clo1100_4051	PWY-6389	(<i>S</i>)-acetoin biosynthesis
Clo1100_4051	PWY-7111	pyruvate fermentation to isobutanol (engineered)
Clo1100_4055	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
Clo1100_4055	PWY-5739	GDP-D-perosamine biosynthesis
Clo1100_4055	PWY-5740	GDP-L-colitose biosynthesis
Clo1100_4055	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Clo1100_4056	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
Clo1100_4082	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
Clo1100_4086	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
Clo1100_4094	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
Clo1100_4098	PWY-5316	nicotine biosynthesis
Clo1100_4098	PWY-5381	pyridine nucleotide cycling (plants)
Clo1100_4098	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
Clo1100_4098	PWY-7342	superpathway of nicotine biosynthesis
Clo1100_4099	PWY-5316	nicotine biosynthesis
Clo1100_4099	PWY-7342	superpathway of nicotine biosynthesis
Clo1100_4100	PWY-5316	nicotine biosynthesis
Clo1100_4100	PWY-7342	superpathway of nicotine biosynthesis
