CLH_0018	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CLH_0032	PWY-5669	phosphatidylethanolamine biosynthesis I
CLH_0054	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_0054	PWY-5686	UMP biosynthesis
CLH_0054	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLH_0055	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_0055	PWY-5686	UMP biosynthesis
CLH_0055	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLH_0057	PWY-381	nitrate reduction II (assimilatory)
CLH_0057	PWY-5675	nitrate reduction V (assimilatory)
CLH_0057	PWY-6549	L-glutamine biosynthesis III
CLH_0057	PWY-6963	ammonia assimilation cycle I
CLH_0057	PWY-6964	ammonia assimilation cycle II
CLH_0058	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_0058	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_0111	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0111	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0111	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0112	PWY-3081	L-lysine biosynthesis V
CLH_0112	PWY-6871	3-methylbutanol biosynthesis
CLH_0137	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_0137	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_0140	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CLH_0164	PWY-6599	guanine and guanosine salvage II
CLH_0164	PWY-6609	adenine and adenosine salvage III
CLH_0164	PWY-6610	adenine and adenosine salvage IV
CLH_0164	PWY-6620	guanine and guanosine salvage
CLH_0166	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CLH_0166	PWY-2161	folate polyglutamylation
CLH_0166	PWY-2201	folate transformations I
CLH_0166	PWY-3841	folate transformations II
CLH_0167	PWY-3961	phosphopantothenate biosynthesis II
CLH_0181	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_0181	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_0214	PWY-7560	methylerythritol phosphate pathway II
CLH_0258	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_0284	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLH_0284	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_0284	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLH_0284	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLH_0284	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0284	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0284	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_0284	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLH_0285	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLH_0285	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_0285	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLH_0285	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLH_0285	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0285	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0285	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_0285	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLH_0296	PWY-1281	sulfoacetaldehyde degradation I
CLH_0296	PWY-5482	pyruvate fermentation to acetate II
CLH_0296	PWY-5485	pyruvate fermentation to acetate IV
CLH_0296	PWY-5497	purine nucleobases degradation II (anaerobic)
CLH_0296	PWY-6637	sulfolactate degradation II
CLH_0297	PWY-5482	pyruvate fermentation to acetate II
CLH_0297	PWY-5485	pyruvate fermentation to acetate IV
CLH_0297	PWY-5497	purine nucleobases degradation II (anaerobic)
CLH_0300	PWY-6749	CMP-legionaminate biosynthesis I
CLH_0302	PWY-5101	L-isoleucine biosynthesis II
CLH_0302	PWY-5103	L-isoleucine biosynthesis III
CLH_0302	PWY-5104	L-isoleucine biosynthesis IV
CLH_0302	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CLH_0302	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CLH_0302	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CLH_0302	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLH_0305	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CLH_0306	PWY-5101	L-isoleucine biosynthesis II
CLH_0306	PWY-5103	L-isoleucine biosynthesis III
CLH_0306	PWY-5104	L-isoleucine biosynthesis IV
CLH_0306	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLH_0307	PWY-5101	L-isoleucine biosynthesis II
CLH_0307	PWY-5103	L-isoleucine biosynthesis III
CLH_0307	PWY-5104	L-isoleucine biosynthesis IV
CLH_0307	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CLH_0307	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CLH_0307	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CLH_0307	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLH_0308	PWY-5101	L-isoleucine biosynthesis II
CLH_0308	PWY-5103	L-isoleucine biosynthesis III
CLH_0308	PWY-5104	L-isoleucine biosynthesis IV
CLH_0308	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLH_0316	PWY-7310	D-glucosaminate degradation
CLH_0323	PWY-6749	CMP-legionaminate biosynthesis I
CLH_0326	PWY-6749	CMP-legionaminate biosynthesis I
CLH_0330	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CLH_0330	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_0330	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CLH_0330	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CLH_0332	PWY-5344	L-homocysteine biosynthesis
CLH_0332	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
CLH_0338	PWY-7560	methylerythritol phosphate pathway II
CLH_0344	PWY-5198	factor 420 biosynthesis
CLH_0344	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLH_0350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_0350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_0365	PWY-1361	benzoyl-CoA degradation I (aerobic)
CLH_0365	PWY-5109	2-methylbutanoate biosynthesis
CLH_0365	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CLH_0365	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CLH_0365	PWY-5177	glutaryl-CoA degradation
CLH_0365	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CLH_0365	PWY-6435	4-hydroxybenzoate biosynthesis V
CLH_0365	PWY-6583	pyruvate fermentation to butanol I
CLH_0365	PWY-6863	pyruvate fermentation to hexanol
CLH_0365	PWY-6883	pyruvate fermentation to butanol II
CLH_0365	PWY-6944	androstenedione degradation
CLH_0365	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CLH_0365	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CLH_0365	PWY-7007	methyl ketone biosynthesis
CLH_0365	PWY-7046	4-coumarate degradation (anaerobic)
CLH_0365	PWY-7094	fatty acid salvage
CLH_0365	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CLH_0365	PWY-735	jasmonic acid biosynthesis
CLH_0365	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CLH_0376	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLH_0376	PWY-6596	adenosine nucleotides degradation I
CLH_0376	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLH_0377	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLH_0381	PWY-7310	D-glucosaminate degradation
CLH_0384	PWY-7310	D-glucosaminate degradation
CLH_0385	PWY-7310	D-glucosaminate degradation
CLH_0388	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLH_0388	PWY-5723	Rubisco shunt
CLH_0389	PWY-3801	sucrose degradation II (sucrose synthase)
CLH_0389	PWY-5054	sorbitol biosynthesis I
CLH_0389	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CLH_0389	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CLH_0389	PWY-5659	GDP-mannose biosynthesis
CLH_0389	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_0389	PWY-621	sucrose degradation III (sucrose invertase)
CLH_0389	PWY-622	starch biosynthesis
CLH_0389	PWY-6531	mannitol cycle
CLH_0389	PWY-6981	chitin biosynthesis
CLH_0389	PWY-7238	sucrose biosynthesis II
CLH_0389	PWY-7347	sucrose biosynthesis III
CLH_0389	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLH_0398	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CLH_0404	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CLH_0461	PWY-7052	cyanophycin metabolism
CLH_0462	PWY-7052	cyanophycin metabolism
CLH_0463	PWY-7560	methylerythritol phosphate pathway II
CLH_0468	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CLH_0468	PWY-7177	UTP and CTP dephosphorylation II
CLH_0468	PWY-7185	UTP and CTP dephosphorylation I
CLH_0469	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_0470	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLH_0470	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CLH_0470	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CLH_0470	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLH_0472	PWY-7199	pyrimidine deoxyribonucleosides salvage
CLH_0479	PWY-7183	pyrimidine nucleobases salvage I
CLH_0480	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLH_0481	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
CLH_0488	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_0490	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_0493	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_0493	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_0507	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CLH_0507	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CLH_0530	PWY-723	alkylnitronates degradation
CLH_0542	PWY-1042	glycolysis IV (plant cytosol)
CLH_0542	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLH_0542	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_0542	PWY-5723	Rubisco shunt
CLH_0542	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_0542	PWY-6886	1-butanol autotrophic biosynthesis
CLH_0542	PWY-6901	superpathway of glucose and xylose degradation
CLH_0542	PWY-7003	glycerol degradation to butanol
CLH_0542	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLH_0542	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLH_0567	PWY-5381	pyridine nucleotide cycling (plants)
CLH_0567	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CLH_0571	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLH_0571	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLH_0584	PWY-5686	UMP biosynthesis
CLH_0592	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLH_0592	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_0592	PWY-7185	UTP and CTP dephosphorylation I
CLH_0592	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLH_0592	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLH_0607	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CLH_0627	PWY-101	photosynthesis light reactions
CLH_0627	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CLH_0634	PWY-4381	fatty acid biosynthesis initiation I
CLH_0659	PWY-5098	chlorophyll <i>a</i> degradation I
CLH_0659	PWY-6927	chlorophyll <i>a</i> degradation II
CLH_0659	PWY-7164	chlorophyll <i>a</i> degradation III
CLH_0662	PWY-6683	sulfate reduction III (assimilatory)
CLH_0667	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLH_0667	PWY-6416	quinate degradation II
CLH_0667	PWY-6707	gallate biosynthesis
CLH_0668	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLH_0680	PWY-6906	chitin derivatives degradation
CLH_0680	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CLH_0680	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CLH_0681	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CLH_0681	PWY-6855	chitin degradation I (archaea)
CLH_0681	PWY-6906	chitin derivatives degradation
CLH_0682	PWY-7310	D-glucosaminate degradation
CLH_0685	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLH_0686	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLH_0691	PWY-5101	L-isoleucine biosynthesis II
CLH_0691	PWY-5103	L-isoleucine biosynthesis III
CLH_0691	PWY-5104	L-isoleucine biosynthesis IV
CLH_0691	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CLH_0691	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CLH_0691	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CLH_0691	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLH_0692	PWY-5101	L-isoleucine biosynthesis II
CLH_0692	PWY-5103	L-isoleucine biosynthesis III
CLH_0692	PWY-5104	L-isoleucine biosynthesis IV
CLH_0692	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CLH_0692	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CLH_0692	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CLH_0692	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLH_0702	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CLH_0703	PWY-7181	pyrimidine deoxyribonucleosides degradation
CLH_0720	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_0729	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLH_0729	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_0729	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0729	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CLH_0735	PWY-1042	glycolysis IV (plant cytosol)
CLH_0735	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLH_0735	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_0735	PWY-6531	mannitol cycle
CLH_0735	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLH_0754	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLH_0754	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CLH_0754	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CLH_0754	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLH_0790	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_0790	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_0792	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLH_0792	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CLH_0798	PWY-6143	CMP-pseudaminate biosynthesis
CLH_0810	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_0834	PWY-1281	sulfoacetaldehyde degradation I
CLH_0834	PWY-5482	pyruvate fermentation to acetate II
CLH_0834	PWY-5485	pyruvate fermentation to acetate IV
CLH_0834	PWY-5497	purine nucleobases degradation II (anaerobic)
CLH_0834	PWY-6637	sulfolactate degradation II
CLH_0860	PWY-6683	sulfate reduction III (assimilatory)
CLH_0872	PWY-7039	phosphatidate metabolism, as a signaling molecule
CLH_0877	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CLH_0877	PWY-6549	L-glutamine biosynthesis III
CLH_0877	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CLH_0877	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CLH_0883	PWY-5663	tetrahydrobiopterin biosynthesis I
CLH_0883	PWY-5664	tetrahydrobiopterin biosynthesis II
CLH_0883	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CLH_0883	PWY-6703	preQ<sub>0</sub> biosynthesis
CLH_0883	PWY-6983	tetrahydrobiopterin biosynthesis III
CLH_0883	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CLH_0913	PWY-5941	glycogen degradation II (eukaryotic)
CLH_0913	PWY-6724	starch degradation II
CLH_0913	PWY-6737	starch degradation V
CLH_0913	PWY-7238	sucrose biosynthesis II
CLH_0914	PWY-5941	glycogen degradation II (eukaryotic)
CLH_0914	PWY-622	starch biosynthesis
CLH_0914	PWY-6731	starch degradation III
CLH_0914	PWY-6737	starch degradation V
CLH_0914	PWY-7238	sucrose biosynthesis II
CLH_0927	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLH_0927	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CLH_0927	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_0927	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0927	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CLH_0927	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLH_0927	PWY-7205	CMP phosphorylation
CLH_0927	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLH_0927	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0927	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLH_0927	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_0927	PWY-7224	purine deoxyribonucleosides salvage
CLH_0927	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_0927	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLH_0938	PWY-6599	guanine and guanosine salvage II
CLH_0938	PWY-6609	adenine and adenosine salvage III
CLH_0938	PWY-6610	adenine and adenosine salvage IV
CLH_0938	PWY-6620	guanine and guanosine salvage
CLH_0945	PWY-6834	spermidine biosynthesis III
CLH_0949	PWY-6562	norspermidine biosynthesis
CLH_0951	PWY-40	putrescine biosynthesis I
CLH_0951	PWY-6305	putrescine biosynthesis IV
CLH_0952	PWY-6349	CDP-archaeol biosynthesis
CLH_0958	PWY-6700	queuosine biosynthesis
CLH_0959	PWY-6700	queuosine biosynthesis
CLH_0964	PWY-6605	adenine and adenosine salvage II
CLH_0964	PWY-6610	adenine and adenosine salvage IV
CLH_0977	PWY-4261	glycerol degradation I
CLH_0981	PWY-2941	L-lysine biosynthesis II
CLH_0981	PWY-2942	L-lysine biosynthesis III
CLH_0981	PWY-5097	L-lysine biosynthesis VI
CLH_0981	PWY-6559	spermidine biosynthesis II
CLH_0981	PWY-6562	norspermidine biosynthesis
CLH_0981	PWY-7153	grixazone biosynthesis
CLH_0982	PWY-381	nitrate reduction II (assimilatory)
CLH_0982	PWY-5675	nitrate reduction V (assimilatory)
CLH_0982	PWY-6549	L-glutamine biosynthesis III
CLH_0982	PWY-6963	ammonia assimilation cycle I
CLH_0982	PWY-6964	ammonia assimilation cycle II
CLH_0992	PWY-7193	pyrimidine ribonucleosides salvage I
CLH_1018	PWY-1622	formaldehyde assimilation I (serine pathway)
CLH_1018	PWY-181	photorespiration
CLH_1018	PWY-2161	folate polyglutamylation
CLH_1018	PWY-2201	folate transformations I
CLH_1018	PWY-3661	glycine betaine degradation I
CLH_1018	PWY-3661-1	glycine betaine degradation II (mammalian)
CLH_1018	PWY-3841	folate transformations II
CLH_1018	PWY-5497	purine nucleobases degradation II (anaerobic)
CLH_1020	PWY-7533	gliotoxin biosynthesis
CLH_1022	PWY-5057	L-valine degradation II
CLH_1022	PWY-5076	L-leucine degradation III
CLH_1022	PWY-5078	L-isoleucine degradation II
CLH_1022	PWY-5101	L-isoleucine biosynthesis II
CLH_1022	PWY-5103	L-isoleucine biosynthesis III
CLH_1022	PWY-5104	L-isoleucine biosynthesis IV
CLH_1022	PWY-5108	L-isoleucine biosynthesis V
CLH_1023	PWY-5381	pyridine nucleotide cycling (plants)
CLH_1023	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CLH_1038	PWY-6123	inosine-5'-phosphate biosynthesis I
CLH_1038	PWY-7234	inosine-5'-phosphate biosynthesis III
CLH_1039	PWY-6123	inosine-5'-phosphate biosynthesis I
CLH_1039	PWY-6124	inosine-5'-phosphate biosynthesis II
CLH_1039	PWY-7234	inosine-5'-phosphate biosynthesis III
CLH_1040	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLH_1040	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLH_1040	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLH_1040	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CLH_1041	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLH_1041	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLH_1041	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLH_1042	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLH_1042	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CLH_1043	PWY-6123	inosine-5'-phosphate biosynthesis I
CLH_1043	PWY-6124	inosine-5'-phosphate biosynthesis II
CLH_1043	PWY-7234	inosine-5'-phosphate biosynthesis III
CLH_1044	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLH_1044	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLH_1044	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLH_1050	PWY-5392	reductive TCA cycle II
CLH_1050	PWY-5537	pyruvate fermentation to acetate V
CLH_1050	PWY-5538	pyruvate fermentation to acetate VI
CLH_1050	PWY-5690	TCA cycle II (plants and fungi)
CLH_1050	PWY-5913	TCA cycle VI (obligate autotrophs)
CLH_1050	PWY-6728	methylaspartate cycle
CLH_1050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLH_1050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CLH_1070	PWY-7310	D-glucosaminate degradation
CLH_1071	PWY-6654	phosphopantothenate biosynthesis III
CLH_1080	PWY-4381	fatty acid biosynthesis initiation I
CLH_1082	PWY-723	alkylnitronates degradation
CLH_1083	PWY-4381	fatty acid biosynthesis initiation I
CLH_1083	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CLH_1083	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLH_1084	PWY-5367	petroselinate biosynthesis
CLH_1084	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CLH_1084	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CLH_1084	PWY-5989	stearate biosynthesis II (bacteria and plants)
CLH_1084	PWY-5994	palmitate biosynthesis I (animals and fungi)
CLH_1084	PWY-6113	superpathway of mycolate biosynthesis
CLH_1084	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CLH_1084	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CLH_1084	PWY-6951	CLH_1084
CLH_1084	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CLH_1084	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLH_1084	PWYG-321	mycolate biosynthesis
CLH_1087	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CLH_1087	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CLH_1087	PWY-5989	stearate biosynthesis II (bacteria and plants)
CLH_1087	PWY-5994	palmitate biosynthesis I (animals and fungi)
CLH_1087	PWY-6113	superpathway of mycolate biosynthesis
CLH_1087	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CLH_1087	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CLH_1087	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLH_1087	PWYG-321	mycolate biosynthesis
CLH_1089	PWY-4381	fatty acid biosynthesis initiation I
CLH_1089	PWY-5743	3-hydroxypropanoate cycle
CLH_1089	PWY-5744	glyoxylate assimilation
CLH_1089	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CLH_1089	PWY-6679	jadomycin biosynthesis
CLH_1089	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLH_1090	PWY-4381	fatty acid biosynthesis initiation I
CLH_1090	PWY-5743	3-hydroxypropanoate cycle
CLH_1090	PWY-5744	glyoxylate assimilation
CLH_1090	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CLH_1090	PWY-6679	jadomycin biosynthesis
CLH_1090	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLH_1101	PWY-6823	molybdenum cofactor biosynthesis
CLH_1120	PWY-6823	molybdenum cofactor biosynthesis
CLH_1120	PWY-6891	thiazole biosynthesis II (Bacillus)
CLH_1120	PWY-6892	thiazole biosynthesis I (E. coli)
CLH_1120	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CLH_1155	PWY-5667	CDP-diacylglycerol biosynthesis I
CLH_1155	PWY-5981	CDP-diacylglycerol biosynthesis III
CLH_1162	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLH_1174	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLH_1174	PWY-5723	Rubisco shunt
CLH_1175	PWY-6898	thiamin salvage III
CLH_1175	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CLH_1175	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CLH_1185	PWY-1281	sulfoacetaldehyde degradation I
CLH_1185	PWY-5482	pyruvate fermentation to acetate II
CLH_1185	PWY-5485	pyruvate fermentation to acetate IV
CLH_1185	PWY-5497	purine nucleobases degradation II (anaerobic)
CLH_1185	PWY-6637	sulfolactate degradation II
CLH_1186	PWY-5482	pyruvate fermentation to acetate II
CLH_1186	PWY-5485	pyruvate fermentation to acetate IV
CLH_1186	PWY-5497	purine nucleobases degradation II (anaerobic)
CLH_1200	PWY-6829	tRNA methylation (yeast)
CLH_1200	PWY-7285	methylwyosine biosynthesis
CLH_1200	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CLH_1216	PWY-7560	methylerythritol phosphate pathway II
CLH_1218	PWY-7560	methylerythritol phosphate pathway II
CLH_1228	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CLH_1228	PWY-6167	flavin biosynthesis II (archaea)
CLH_1228	PWY-6168	flavin biosynthesis III (fungi)
CLH_1233	PWY-2941	L-lysine biosynthesis II
CLH_1233	PWY-2942	L-lysine biosynthesis III
CLH_1233	PWY-5097	L-lysine biosynthesis VI
CLH_1233	PWY-6559	spermidine biosynthesis II
CLH_1233	PWY-6562	norspermidine biosynthesis
CLH_1233	PWY-7153	grixazone biosynthesis
CLH_1237	PWY-5269	cardiolipin biosynthesis II
CLH_1237	PWY-5668	cardiolipin biosynthesis I
CLH_1243	PWY-6123	inosine-5'-phosphate biosynthesis I
CLH_1243	PWY-6124	inosine-5'-phosphate biosynthesis II
CLH_1243	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_1243	PWY-7234	inosine-5'-phosphate biosynthesis III
CLH_1247	PWY-6167	flavin biosynthesis II (archaea)
CLH_1247	PWY-6168	flavin biosynthesis III (fungi)
CLH_1247	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_1248	PWY-6167	flavin biosynthesis II (archaea)
CLH_1248	PWY-6168	flavin biosynthesis III (fungi)
CLH_1248	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLH_1249	PWY-6167	flavin biosynthesis II (archaea)
CLH_1249	PWY-6168	flavin biosynthesis III (fungi)
CLH_1254	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
CLH_1267	PWY-6349	CDP-archaeol biosynthesis
CLH_1270	PWY-6871	3-methylbutanol biosynthesis
CLH_1310	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_1310	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_1314	PWY-7310	D-glucosaminate degradation
CLH_1323	PWY-6610	adenine and adenosine salvage IV
CLH_1360	PWY-6891	thiazole biosynthesis II (Bacillus)
CLH_1360	PWY-6892	thiazole biosynthesis I (E. coli)
CLH_1360	PWY-7560	methylerythritol phosphate pathway II
CLH_1365	PWY-1361	benzoyl-CoA degradation I (aerobic)
CLH_1365	PWY-5109	2-methylbutanoate biosynthesis
CLH_1365	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CLH_1365	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CLH_1365	PWY-5177	glutaryl-CoA degradation
CLH_1365	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CLH_1365	PWY-6435	4-hydroxybenzoate biosynthesis V
CLH_1365	PWY-6583	pyruvate fermentation to butanol I
CLH_1365	PWY-6863	pyruvate fermentation to hexanol
CLH_1365	PWY-6883	pyruvate fermentation to butanol II
CLH_1365	PWY-6944	androstenedione degradation
CLH_1365	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CLH_1365	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CLH_1365	PWY-7007	methyl ketone biosynthesis
CLH_1365	PWY-7046	4-coumarate degradation (anaerobic)
CLH_1365	PWY-7094	fatty acid salvage
CLH_1365	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CLH_1365	PWY-735	jasmonic acid biosynthesis
CLH_1365	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CLH_1368	PWY-6902	chitin degradation II
CLH_1389	PWY-5437	L-threonine degradation I
CLH_1389	PWY-7013	L-1,2-propanediol degradation
CLH_1416	PWY-7310	D-glucosaminate degradation
CLH_1420	PWY-7310	D-glucosaminate degradation
CLH_1426	PWY-0	putrescine degradation III
CLH_1426	PWY-6117	spermine and spermidine degradation I
CLH_1429	PWY-7310	D-glucosaminate degradation
CLH_1433	PWY-6683	sulfate reduction III (assimilatory)
CLH_1451	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLH_1451	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CLH_1466	PWY-6749	CMP-legionaminate biosynthesis I
CLH_1466	PWY-7131	CMP-legionaminate biosynthesis II
CLH_1486	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLH_1493	PWY-4202	arsenate detoxification I (glutaredoxin)
CLH_1493	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLH_1493	PWY-6608	guanosine nucleotides degradation III
CLH_1493	PWY-6609	adenine and adenosine salvage III
CLH_1493	PWY-6611	adenine and adenosine salvage V
CLH_1493	PWY-6620	guanine and guanosine salvage
CLH_1493	PWY-6627	salinosporamide A biosynthesis
CLH_1493	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CLH_1493	PWY-7179	purine deoxyribonucleosides degradation I
CLH_1493	PWY-7179-1	purine deoxyribonucleosides degradation
CLH_1495	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CLH_1496	PWY-6891	thiazole biosynthesis II (Bacillus)
CLH_1496	PWY-6892	thiazole biosynthesis I (E. coli)
CLH_1496	PWY-7560	methylerythritol phosphate pathway II
CLH_1498	PWY-4202	arsenate detoxification I (glutaredoxin)
CLH_1498	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLH_1498	PWY-6608	guanosine nucleotides degradation III
CLH_1498	PWY-6609	adenine and adenosine salvage III
CLH_1498	PWY-6611	adenine and adenosine salvage V
CLH_1498	PWY-6620	guanine and guanosine salvage
CLH_1498	PWY-6627	salinosporamide A biosynthesis
CLH_1498	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CLH_1498	PWY-7179	purine deoxyribonucleosides degradation I
CLH_1498	PWY-7179-1	purine deoxyribonucleosides degradation
CLH_1499	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLH_1499	PWY-5723	Rubisco shunt
CLH_1518	PWY-6840	homoglutathione biosynthesis
CLH_1518	PWY-7255	ergothioneine biosynthesis I (bacteria)
CLH_1540	PWY-5386	methylglyoxal degradation I
CLH_1542	PWY-6502	oxidized GTP and dGTP detoxification
CLH_1550	PWY-3861	mannitol degradation II
CLH_1550	PWY-3881	mannitol biosynthesis
CLH_1550	PWY-5659	GDP-mannose biosynthesis
CLH_1550	PWY-7456	mannan degradation
CLH_1550	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CLH_1584	PWY-5199	factor 420 polyglutamylation
CLH_1638	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
CLH_1661	PWY-5480	pyruvate fermentation to ethanol I
CLH_1661	PWY-5485	pyruvate fermentation to acetate IV
CLH_1661	PWY-5493	reductive monocarboxylic acid cycle
CLH_1668	PWY-6854	ethylene biosynthesis III (microbes)
CLH_1680	PWY-6654	phosphopantothenate biosynthesis III
CLH_1682	PWY-5155	&beta;-alanine biosynthesis III
CLH_1686	PWY-7310	D-glucosaminate degradation
CLH_1690	PWY-2781	<i>cis</i>-zeatin biosynthesis
CLH_1767	PWY-7560	methylerythritol phosphate pathway II
CLH_1768	PWY-7205	CMP phosphorylation
CLH_1802	PWY-6854	ethylene biosynthesis III (microbes)
CLH_1823	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLH_1850	PWY-5437	L-threonine degradation I
CLH_1850	PWY-7013	L-1,2-propanediol degradation
CLH_1889	PWY-3821	galactose degradation III
CLH_1889	PWY-6317	galactose degradation I (Leloir pathway)
CLH_1889	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CLH_1889	PWY-6527	stachyose degradation
CLH_1889	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CLH_1889	PWY-7344	UDP-D-galactose biosynthesis
CLH_1894	PWY-4202	arsenate detoxification I (glutaredoxin)
CLH_1894	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLH_1894	PWY-6608	guanosine nucleotides degradation III
CLH_1894	PWY-6609	adenine and adenosine salvage III
CLH_1894	PWY-6611	adenine and adenosine salvage V
CLH_1894	PWY-6620	guanine and guanosine salvage
CLH_1894	PWY-6627	salinosporamide A biosynthesis
CLH_1894	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CLH_1894	PWY-7179	purine deoxyribonucleosides degradation I
CLH_1894	PWY-7179-1	purine deoxyribonucleosides degradation
CLH_1897	PWY-5750	itaconate biosynthesis
CLH_1897	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_1897	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CLH_1937	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CLH_1937	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CLH_1937	PWY-6268	adenosylcobalamin salvage from cobalamin
CLH_1937	PWY-6269	adenosylcobalamin salvage from cobinamide II
CLH_1940	PWY-7013	L-1,2-propanediol degradation
CLH_1941	PWY-7013	L-1,2-propanediol degradation
CLH_1955	PWY-7310	D-glucosaminate degradation
CLH_1956	PWY-842	starch degradation I
CLH_1998	PWY-3162	L-tryptophan degradation V (side chain pathway)
CLH_1998	PWY-5057	L-valine degradation II
CLH_1998	PWY-5076	L-leucine degradation III
CLH_1998	PWY-5078	L-isoleucine degradation II
CLH_1998	PWY-5079	L-phenylalanine degradation III
CLH_1998	PWY-5082	L-methionine degradation III
CLH_1998	PWY-5162	2-oxopentenoate degradation
CLH_1998	PWY-5436	L-threonine degradation IV
CLH_1998	PWY-5480	pyruvate fermentation to ethanol I
CLH_1998	PWY-5486	pyruvate fermentation to ethanol II
CLH_1998	PWY-5751	phenylethanol biosynthesis
CLH_1998	PWY-6028	acetoin degradation
CLH_1998	PWY-6313	serotonin degradation
CLH_1998	PWY-6333	acetaldehyde biosynthesis I
CLH_1998	PWY-6342	noradrenaline and adrenaline degradation
CLH_1998	PWY-6587	pyruvate fermentation to ethanol III
CLH_1998	PWY-6802	salidroside biosynthesis
CLH_1998	PWY-6871	3-methylbutanol biosynthesis
CLH_1998	PWY-7013	L-1,2-propanediol degradation
CLH_1998	PWY-7085	triethylamine degradation
CLH_1998	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLH_1998	PWY-7118	chitin degradation to ethanol
CLH_1998	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CLH_1998	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CLH_1998	PWY-7557	dehydrodiconiferyl alcohol degradation
CLH_2028	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLH_2028	PWY-6416	quinate degradation II
CLH_2028	PWY-6707	gallate biosynthesis
CLH_2044	PWY-7310	D-glucosaminate degradation
CLH_2045	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CLH_2045	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CLH_2096	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLH_2096	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLH_2152	PWY-842	starch degradation I
CLH_2164	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CLH_2164	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CLH_2164	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CLH_2166	PWY-6891	thiazole biosynthesis II (Bacillus)
CLH_2166	PWY-6892	thiazole biosynthesis I (E. coli)
CLH_2166	PWY-7560	methylerythritol phosphate pathway II
CLH_2170	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CLH_2170	PWY-2201	folate transformations I
CLH_2170	PWY-3841	folate transformations II
CLH_2170	PWY-5030	L-histidine degradation III
CLH_2170	PWY-5497	purine nucleobases degradation II (anaerobic)
CLH_2170	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CLH_2193	PWY-2941	L-lysine biosynthesis II
CLH_2193	PWY-5097	L-lysine biosynthesis VI
CLH_2196	PWY-7183	pyrimidine nucleobases salvage I
CLH_2202	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLH_2208	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLH_2208	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CLH_2208	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLH_2209	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_2209	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_2222	PWY-5030	L-histidine degradation III
CLH_2222	PWY-5497	purine nucleobases degradation II (anaerobic)
CLH_2229	PWY-6749	CMP-legionaminate biosynthesis I
CLH_2255	PWY-2941	L-lysine biosynthesis II
CLH_2255	PWY-2942	L-lysine biosynthesis III
CLH_2255	PWY-5097	L-lysine biosynthesis VI
CLH_2255	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_2255	PWY-6559	spermidine biosynthesis II
CLH_2255	PWY-6562	norspermidine biosynthesis
CLH_2255	PWY-7153	grixazone biosynthesis
CLH_2255	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLH_2256	PWY-2941	L-lysine biosynthesis II
CLH_2256	PWY-2942	L-lysine biosynthesis III
CLH_2256	PWY-5097	L-lysine biosynthesis VI
CLH_2257	PWY-2941	L-lysine biosynthesis II
CLH_2257	PWY-2942	L-lysine biosynthesis III
CLH_2257	PWY-5097	L-lysine biosynthesis VI
CLH_2265	PWY-2941	L-lysine biosynthesis II
CLH_2270	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLH_2270	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_2270	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLH_2270	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLH_2270	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_2270	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_2270	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_2270	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLH_2272	PWY-2161	folate polyglutamylation
CLH_2300	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_2322	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLH_2333	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CLH_2333	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CLH_2335	PWY-5481	pyruvate fermentation to lactate
CLH_2335	PWY-6901	superpathway of glucose and xylose degradation
CLH_2339	PWY-5480	pyruvate fermentation to ethanol I
CLH_2339	PWY-5485	pyruvate fermentation to acetate IV
CLH_2339	PWY-5493	reductive monocarboxylic acid cycle
CLH_2341	PWY-5686	UMP biosynthesis
CLH_2344	PWY-5686	UMP biosynthesis
CLH_2345	PWY-5686	UMP biosynthesis
CLH_2347	PWY-5686	UMP biosynthesis
CLH_2376	PWY-0	putrescine degradation III
CLH_2376	PWY-6117	spermine and spermidine degradation I
CLH_2394	PWY-6788	cellulose degradation II (fungi)
CLH_2400	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_2401	PWY-5913	TCA cycle VI (obligate autotrophs)
CLH_2401	PWY-6549	L-glutamine biosynthesis III
CLH_2401	PWY-6728	methylaspartate cycle
CLH_2401	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLH_2401	PWY-7124	ethylene biosynthesis V (engineered)
CLH_2401	PWY-7254	TCA cycle VII (acetate-producers)
CLH_2401	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CLH_2411	PWY-4621	arsenate detoxification II (glutaredoxin)
CLH_2426	PWY-7205	CMP phosphorylation
CLH_2504	PWY-4981	L-proline biosynthesis II (from arginine)
CLH_2569	PWY-1042	glycolysis IV (plant cytosol)
CLH_2569	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLH_2569	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_2569	PWY-5723	Rubisco shunt
CLH_2569	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_2569	PWY-6886	1-butanol autotrophic biosynthesis
CLH_2569	PWY-6901	superpathway of glucose and xylose degradation
CLH_2569	PWY-7003	glycerol degradation to butanol
CLH_2569	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLH_2569	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLH_2582	PWY-2201	folate transformations I
CLH_2582	PWY-3841	folate transformations II
CLH_2583	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CLH_2583	PWY-6153	autoinducer AI-2 biosynthesis I
CLH_2583	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CLH_2584	PWY-2201	folate transformations I
CLH_2584	PWY-3841	folate transformations II
CLH_2585	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLH_2585	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CLH_2585	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLH_2588	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_2589	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_2606	PWY-5381	pyridine nucleotide cycling (plants)
CLH_2635	PWY-6823	molybdenum cofactor biosynthesis
CLH_2635	PWY-6891	thiazole biosynthesis II (Bacillus)
CLH_2635	PWY-6892	thiazole biosynthesis I (E. coli)
CLH_2635	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CLH_2638	PWY-702	L-methionine biosynthesis II
CLH_2645	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CLH_2646	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLH_2647	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLH_2647	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLH_2648	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLH_2648	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLH_2648	PWY-5194	siroheme biosynthesis
CLH_2648	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CLH_2649	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLH_2649	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLH_2650	PWY-5194	siroheme biosynthesis
CLH_2650	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CLH_2651	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLH_2652	PWY-6683	sulfate reduction III (assimilatory)
CLH_2660	PWY-6482	diphthamide biosynthesis (archaea)
CLH_2660	PWY-7546	diphthamide biosynthesis (eukaryotes)
CLH_2661	PWY-5443	aminopropanol phosphate biosynthesis I
CLH_2664	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CLH_2664	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CLH_2664	PWY-6269	adenosylcobalamin salvage from cobinamide II
CLH_2665	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CLH_2665	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CLH_2665	PWY-6269	adenosylcobalamin salvage from cobinamide II
CLH_2666	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CLH_2666	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CLH_2666	PWY-6269	adenosylcobalamin salvage from cobinamide II
CLH_2667	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CLH_2667	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CLH_2667	PWY-6268	adenosylcobalamin salvage from cobalamin
CLH_2667	PWY-6269	adenosylcobalamin salvage from cobinamide II
CLH_2674	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
CLH_2674	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
CLH_2674	PWY-6269	adenosylcobalamin salvage from cobinamide II
CLH_2677	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CLH_2678	PWY-5194	siroheme biosynthesis
CLH_2678	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CLH_2680	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CLH_2682	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CLH_2685	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CLH_2694	PWY-7310	D-glucosaminate degradation
CLH_2715	PWY-6683	sulfate reduction III (assimilatory)
CLH_2721	PWY-4202	arsenate detoxification I (glutaredoxin)
CLH_2721	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLH_2721	PWY-6608	guanosine nucleotides degradation III
CLH_2721	PWY-6609	adenine and adenosine salvage III
CLH_2721	PWY-6611	adenine and adenosine salvage V
CLH_2721	PWY-6620	guanine and guanosine salvage
CLH_2721	PWY-6627	salinosporamide A biosynthesis
CLH_2721	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CLH_2721	PWY-7179	purine deoxyribonucleosides degradation I
CLH_2721	PWY-7179-1	purine deoxyribonucleosides degradation
CLH_2722	PWY-6556	pyrimidine ribonucleosides salvage II
CLH_2722	PWY-7181	pyrimidine deoxyribonucleosides degradation
CLH_2722	PWY-7193	pyrimidine ribonucleosides salvage I
CLH_2722	PWY-7199	pyrimidine deoxyribonucleosides salvage
CLH_2730	PWY-842	starch degradation I
CLH_2737	PWY-6823	molybdenum cofactor biosynthesis
CLH_2744	PWY-5381	pyridine nucleotide cycling (plants)
CLH_2744	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLH_2744	PWY-6596	adenosine nucleotides degradation I
CLH_2744	PWY-6606	guanosine nucleotides degradation II
CLH_2744	PWY-6607	guanosine nucleotides degradation I
CLH_2744	PWY-6608	guanosine nucleotides degradation III
CLH_2744	PWY-7185	UTP and CTP dephosphorylation I
CLH_2749	PWY-2941	L-lysine biosynthesis II
CLH_2749	PWY-2942	L-lysine biosynthesis III
CLH_2749	PWY-5097	L-lysine biosynthesis VI
CLH_2764	PWY-7310	D-glucosaminate degradation
CLH_2771	PWY-5316	nicotine biosynthesis
CLH_2771	PWY-5381	pyridine nucleotide cycling (plants)
CLH_2771	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CLH_2771	PWY-7342	superpathway of nicotine biosynthesis
CLH_2773	PWY-5316	nicotine biosynthesis
CLH_2773	PWY-7342	superpathway of nicotine biosynthesis
CLH_2790	PWY-6683	sulfate reduction III (assimilatory)
CLH_2800	PWY-101	photosynthesis light reactions
CLH_2800	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CLH_2806	PWY-1042	glycolysis IV (plant cytosol)
CLH_2806	PWY-1622	formaldehyde assimilation I (serine pathway)
CLH_2806	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLH_2806	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_2806	PWY-5723	Rubisco shunt
CLH_2806	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_2806	PWY-6886	1-butanol autotrophic biosynthesis
CLH_2806	PWY-6901	superpathway of glucose and xylose degradation
CLH_2806	PWY-7003	glycerol degradation to butanol
CLH_2806	PWY-7124	ethylene biosynthesis V (engineered)
CLH_2806	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLH_2808	PWY-1042	glycolysis IV (plant cytosol)
CLH_2808	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLH_2808	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_2808	PWY-5723	Rubisco shunt
CLH_2808	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_2808	PWY-6886	1-butanol autotrophic biosynthesis
CLH_2808	PWY-6901	superpathway of glucose and xylose degradation
CLH_2808	PWY-7003	glycerol degradation to butanol
CLH_2808	PWY-7124	ethylene biosynthesis V (engineered)
CLH_2808	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLH_2812	PWY-1042	glycolysis IV (plant cytosol)
CLH_2812	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_2812	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_2812	PWY-7003	glycerol degradation to butanol
CLH_2813	PWY-1042	glycolysis IV (plant cytosol)
CLH_2813	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_2813	PWY-6886	1-butanol autotrophic biosynthesis
CLH_2813	PWY-6901	superpathway of glucose and xylose degradation
CLH_2813	PWY-7003	glycerol degradation to butanol
CLH_2814	PWY-1042	glycolysis IV (plant cytosol)
CLH_2814	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_2814	PWY-6901	superpathway of glucose and xylose degradation
CLH_2814	PWY-7003	glycerol degradation to butanol
CLH_2823	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_2823	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_2827	PWY-6936	seleno-amino acid biosynthesis
CLH_2827	PWY-7274	D-cycloserine biosynthesis
CLH_2828	PWY-6936	seleno-amino acid biosynthesis
CLH_2833	PWY-5669	phosphatidylethanolamine biosynthesis I
CLH_2855	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CLH_2855	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CLH_2855	PWY-6897	thiamin salvage II
CLH_2855	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CLH_2855	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CLH_2855	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
CLH_2855	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLH_2856	PWY-6897	thiamin salvage II
CLH_2856	PWY-7353	4-methyl-5(&beta;-hydroxyethyl)thiazole salvage (yeast)
CLH_2856	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLH_2857	PWY-6910	hydroxymethylpyrimidine salvage
CLH_2857	PWY-7356	thiamin salvage IV (yeast)
CLH_2857	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLH_2864	PWY-1042	glycolysis IV (plant cytosol)
CLH_2864	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLH_2864	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_2864	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_2864	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLH_2865	PWY-4983	L-citrulline-nitric oxide cycle
CLH_2865	PWY-4984	urea cycle
CLH_2865	PWY-5	canavanine biosynthesis
CLH_2865	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_2865	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLH_2866	PWY-4983	L-citrulline-nitric oxide cycle
CLH_2866	PWY-4984	urea cycle
CLH_2866	PWY-5	canavanine biosynthesis
CLH_2866	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_2866	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLH_2867	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_2867	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLH_2868	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_2869	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLH_2869	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLH_2871	PWY-4981	L-proline biosynthesis II (from arginine)
CLH_2871	PWY-4984	urea cycle
CLH_2871	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLH_2875	PWY-3861	mannitol degradation II
CLH_2875	PWY-3881	mannitol biosynthesis
CLH_2875	PWY-5659	GDP-mannose biosynthesis
CLH_2875	PWY-7456	mannan degradation
CLH_2875	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CLH_2877	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CLH_2877	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CLH_2883	PWY-7310	D-glucosaminate degradation
CLH_2885	PWY-6906	chitin derivatives degradation
CLH_2885	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CLH_2885	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CLH_2887	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLH_2887	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CLH_2887	PWY-6164	3-dehydroquinate biosynthesis I
CLH_2888	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLH_2889	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLH_2890	PWY-3461	L-tyrosine biosynthesis II
CLH_2890	PWY-3462	L-phenylalanine biosynthesis II
CLH_2890	PWY-6120	L-tyrosine biosynthesis III
CLH_2890	PWY-6627	salinosporamide A biosynthesis
CLH_2890	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CLH_2891	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLH_2892	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLH_2893	PWY-6164	3-dehydroquinate biosynthesis I
CLH_2894	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLH_2894	PWY-5111	CMP-3-deoxy-D-<i>manno</i>-octulosonate biosynthesis II (from D-arabinose 5-phosphate)
CLH_2894	PWY-6164	3-dehydroquinate biosynthesis I
CLH_2921	PWY-3801	sucrose degradation II (sucrose synthase)
CLH_2921	PWY-6527	stachyose degradation
CLH_2921	PWY-6981	chitin biosynthesis
CLH_2921	PWY-7238	sucrose biosynthesis II
CLH_2921	PWY-7343	UDP-glucose biosynthesis
CLH_2927	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
CLH_2950	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CLH_2950	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CLH_2956	PWY-101	photosynthesis light reactions
CLH_2956	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
CLH_2996	PWY-7560	methylerythritol phosphate pathway II
CLH_3002	PWY-3221	dTDP-L-rhamnose biosynthesis II
CLH_3002	PWY-6808	dTDP-D-forosamine biosynthesis
CLH_3002	PWY-6942	dTDP-D-desosamine biosynthesis
CLH_3002	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CLH_3002	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CLH_3002	PWY-6974	dTDP-L-olivose biosynthesis
CLH_3002	PWY-6976	dTDP-L-mycarose biosynthesis
CLH_3002	PWY-7104	dTDP-L-megosamine biosynthesis
CLH_3002	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CLH_3002	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CLH_3002	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CLH_3002	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CLH_3002	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CLH_3002	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CLH_3002	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CLH_3002	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CLH_3004	PWY-3221	dTDP-L-rhamnose biosynthesis II
CLH_3004	PWY-6808	dTDP-D-forosamine biosynthesis
CLH_3004	PWY-6942	dTDP-D-desosamine biosynthesis
CLH_3004	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CLH_3004	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CLH_3004	PWY-6974	dTDP-L-olivose biosynthesis
CLH_3004	PWY-6976	dTDP-L-mycarose biosynthesis
CLH_3004	PWY-7104	dTDP-L-megosamine biosynthesis
CLH_3004	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CLH_3004	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CLH_3004	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CLH_3004	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CLH_3004	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CLH_3004	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CLH_3004	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CLH_3004	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CLH_3005	PWY-6655	xanthan biosynthesis
CLH_3005	PWY-6658	acetan biosynthesis
CLH_3014	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
CLH_3015	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
CLH_3017	PWY-7310	D-glucosaminate degradation
CLH_3039	PWY-2941	L-lysine biosynthesis II
CLH_3039	PWY-2942	L-lysine biosynthesis III
CLH_3039	PWY-5097	L-lysine biosynthesis VI
CLH_3086	PWY-1042	glycolysis IV (plant cytosol)
CLH_3086	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLH_3086	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_3086	PWY-5723	Rubisco shunt
CLH_3086	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLH_3086	PWY-6886	1-butanol autotrophic biosynthesis
CLH_3086	PWY-6901	superpathway of glucose and xylose degradation
CLH_3086	PWY-7003	glycerol degradation to butanol
CLH_3086	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLH_3086	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLH_3087	PWY-1042	glycolysis IV (plant cytosol)
CLH_3087	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLH_3087	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLH_3087	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLH_3093	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_3093	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_3107	PWY-6891	thiazole biosynthesis II (Bacillus)
CLH_3107	PWY-6892	thiazole biosynthesis I (E. coli)
CLH_3107	PWY-7560	methylerythritol phosphate pathway II
CLH_3111	PWY-6938	NADH repair
CLH_3112	PWY-6012	acyl carrier protein metabolism I
CLH_3112	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CLH_3137	PWY-6984	lipoate salvage II
CLH_3137	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CLH_3137	PWY-7381	lipoate biosynthesis and incorporation (glycine cleavage system, yeast)
CLH_3138	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CLH_3138	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CLH_3146	PWY-2723	trehalose degradation V
CLH_3146	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CLH_3146	PWY-5661	GDP-glucose biosynthesis
CLH_3146	PWY-7238	sucrose biosynthesis II
CLH_3146	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLH_3163	PWY-622	starch biosynthesis
CLH_3165	PWY-5941	glycogen degradation II (eukaryotic)
CLH_3165	PWY-622	starch biosynthesis
CLH_3165	PWY-6731	starch degradation III
CLH_3165	PWY-6737	starch degradation V
CLH_3165	PWY-7238	sucrose biosynthesis II
CLH_3166	PWY-622	starch biosynthesis
CLH_3167	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CLH_3167	PWY-622	starch biosynthesis
CLH_3174	PWY-7310	D-glucosaminate degradation
CLH_3183	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CLH_3183	PWY-6153	autoinducer AI-2 biosynthesis I
CLH_3183	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CLH_3194	PWY-3801	sucrose degradation II (sucrose synthase)
CLH_3194	PWY-6527	stachyose degradation
CLH_3194	PWY-6981	chitin biosynthesis
CLH_3194	PWY-7238	sucrose biosynthesis II
CLH_3194	PWY-7343	UDP-glucose biosynthesis
CLH_3195	PWY-3221	dTDP-L-rhamnose biosynthesis II
CLH_3195	PWY-6808	dTDP-D-forosamine biosynthesis
CLH_3195	PWY-6942	dTDP-D-desosamine biosynthesis
CLH_3195	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CLH_3195	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CLH_3195	PWY-6974	dTDP-L-olivose biosynthesis
CLH_3195	PWY-6976	dTDP-L-mycarose biosynthesis
CLH_3195	PWY-7104	dTDP-L-megosamine biosynthesis
CLH_3195	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CLH_3195	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CLH_3195	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CLH_3195	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CLH_3195	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CLH_3195	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CLH_3195	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CLH_3195	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CLH_3198	PWY-3221	dTDP-L-rhamnose biosynthesis II
CLH_3198	PWY-6808	dTDP-D-forosamine biosynthesis
CLH_3198	PWY-6942	dTDP-D-desosamine biosynthesis
CLH_3198	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
CLH_3198	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
CLH_3198	PWY-6974	dTDP-L-olivose biosynthesis
CLH_3198	PWY-6976	dTDP-L-mycarose biosynthesis
CLH_3198	PWY-7104	dTDP-L-megosamine biosynthesis
CLH_3198	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
CLH_3198	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
CLH_3198	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
CLH_3198	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
CLH_3198	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
CLH_3198	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
CLH_3198	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
CLH_3198	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
CLH_3218	PWY-6832	2-aminoethylphosphonate degradation II
CLH_3227	PWY-3841	folate transformations II
CLH_3227	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLH_3227	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLH_3227	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLH_3227	PWY-7199	pyrimidine deoxyribonucleosides salvage
CLH_3227	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLH_3228	PWY-3841	folate transformations II
CLH_3228	PWY-6614	tetrahydrofolate biosynthesis
CLH_3235	PWY-621	sucrose degradation III (sucrose invertase)
CLH_3237	PWY-7310	D-glucosaminate degradation
CLH_3257	PWY-5667	CDP-diacylglycerol biosynthesis I
CLH_3257	PWY-5981	CDP-diacylglycerol biosynthesis III
CLH_3257	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CLH_3257	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CLH_3270	PWY-2941	L-lysine biosynthesis II
CLH_3270	PWY-2942	L-lysine biosynthesis III
CLH_3270	PWY-5097	L-lysine biosynthesis VI
CLH_3305	PWY-5481	pyruvate fermentation to lactate
CLH_3305	PWY-6901	superpathway of glucose and xylose degradation
CLH_3324	PWY-6891	thiazole biosynthesis II (Bacillus)
CLH_3324	PWY-6892	thiazole biosynthesis I (E. coli)
CLH_3324	PWY-7560	methylerythritol phosphate pathway II
CLH_3326	PWY-7310	D-glucosaminate degradation
CLH_3328	PWY-7310	D-glucosaminate degradation
CLH_3346	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLH_3346	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLH_3370	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLH_3372	PWY-3341	L-proline biosynthesis III
CLH_3372	PWY-4981	L-proline biosynthesis II (from arginine)
CLH_3372	PWY-6344	L-ornithine degradation II (Stickland reaction)
CLH_3386	PWY-6823	molybdenum cofactor biosynthesis
CLH_3386	PWY-6891	thiazole biosynthesis II (Bacillus)
CLH_3386	PWY-6892	thiazole biosynthesis I (E. coli)
CLH_3386	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
